Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40823.t1 | ACJ84585.1 | 94.7 | 282 | 14 | 1 | 1 | 282 | 1 | 281 | 1.40E-149 | 538.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40823.t1 | O80494 | 45.6 | 283 | 138 | 9 | 11 | 282 | 3 | 280 | 1.1e-57 | 224.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40823.t1 | B7FIK6 | 94.7 | 282 | 14 | 1 | 1 | 282 | 1 | 281 | 1.0e-149 | 538.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050496 | MS.gene40823 | -0.825893 | 3.66E-54 | -1.69E-46 |
| MS.gene053083 | MS.gene40823 | 0.819444 | 1.16E-52 | -1.69E-46 |
| MS.gene055251 | MS.gene40823 | 0.810025 | 1.41E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene40823 | -0.801085 | 1.06E-48 | -1.69E-46 |
| MS.gene060076 | MS.gene40823 | 0.826428 | 2.73E-54 | -1.69E-46 |
| MS.gene060595 | MS.gene40823 | 0.813437 | 2.56E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene40823 | -0.812406 | 4.31E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene40823 | -0.815611 | 8.46E-52 | -1.69E-46 |
| MS.gene061044 | MS.gene40823 | 0.823012 | 1.74E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40823 | MS.gene22796 | PPI |
| MS.gene40823 | MS.gene054425 | PPI |
| MS.gene40823 | MS.gene72988 | PPI |
| MS.gene40823 | MS.gene033388 | PPI |
| MS.gene40823 | MS.gene011426 | PPI |
| MS.gene40823 | MS.gene072532 | PPI |
| MS.gene054425 | MS.gene40823 | PPI |
| MS.gene40823 | MS.gene015544 | PPI |
| MS.gene40823 | MS.gene20125 | PPI |
| MS.gene40823 | MS.gene015546 | PPI |
| MS.gene40823 | MS.gene072814 | PPI |
| MS.gene40823 | MS.gene050935 | PPI |
| MS.gene40823 | MS.gene22617 | PPI |
| MS.gene22796 | MS.gene40823 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40823.t1 | MTR_1g083580 | 94.681 | 282 | 14 | 1 | 1 | 282 | 1 | 281 | 0.0 | 555 |
| MS.gene40823.t1 | MTR_7g112550 | 60.839 | 286 | 100 | 4 | 4 | 282 | 3 | 283 | 6.06e-126 | 360 |
| MS.gene40823.t1 | MTR_7g112560 | 45.487 | 277 | 129 | 6 | 8 | 282 | 1 | 257 | 1.39e-76 | 234 |
| MS.gene40823.t1 | MTR_1g079260 | 42.705 | 281 | 143 | 8 | 8 | 282 | 4 | 272 | 1.27e-69 | 216 |
| MS.gene40823.t1 | MTR_1g079410 | 41.489 | 282 | 146 | 7 | 6 | 282 | 6 | 273 | 1.48e-68 | 214 |
| MS.gene40823.t1 | MTR_1g079460 | 41.877 | 277 | 145 | 5 | 8 | 282 | 4 | 266 | 1.11e-65 | 206 |
| MS.gene40823.t1 | MTR_1g079140 | 41.297 | 293 | 149 | 8 | 11 | 282 | 16 | 306 | 2.10e-64 | 204 |
| MS.gene40823.t1 | MTR_4g023570 | 41.516 | 277 | 120 | 6 | 8 | 282 | 1 | 237 | 5.88e-64 | 201 |
| MS.gene40823.t1 | MTR_1g100597 | 39.437 | 284 | 152 | 5 | 6 | 282 | 2 | 272 | 8.72e-64 | 202 |
| MS.gene40823.t1 | MTR_1g079180 | 40.794 | 277 | 151 | 4 | 6 | 282 | 2 | 265 | 5.76e-63 | 199 |
| MS.gene40823.t1 | MTR_1g079370 | 37.857 | 280 | 155 | 7 | 6 | 282 | 2 | 265 | 1.04e-61 | 196 |
| MS.gene40823.t1 | MTR_1g079200 | 40.860 | 279 | 147 | 6 | 6 | 282 | 2 | 264 | 1.14e-61 | 196 |
| MS.gene40823.t1 | MTR_1g079850 | 39.510 | 286 | 152 | 8 | 9 | 282 | 5 | 281 | 1.66e-58 | 188 |
| MS.gene40823.t1 | MTR_1g079380 | 40.714 | 280 | 147 | 7 | 6 | 282 | 2 | 265 | 4.25e-58 | 188 |
| MS.gene40823.t1 | MTR_1g079230 | 37.895 | 285 | 156 | 7 | 6 | 282 | 2 | 273 | 1.41e-55 | 181 |
| MS.gene40823.t1 | MTR_1g100613 | 41.564 | 243 | 133 | 5 | 24 | 263 | 5 | 241 | 5.19e-55 | 178 |
| MS.gene40823.t1 | MTR_1g026510 | 38.567 | 293 | 149 | 11 | 8 | 282 | 4 | 283 | 5.03e-54 | 177 |
| MS.gene40823.t1 | MTR_1g079400 | 35.069 | 288 | 158 | 6 | 6 | 282 | 10 | 279 | 1.04e-50 | 168 |
| MS.gene40823.t1 | MTR_1g079250 | 37.102 | 283 | 162 | 7 | 8 | 282 | 4 | 278 | 5.46e-49 | 164 |
| MS.gene40823.t1 | MTR_3g452600 | 36.101 | 277 | 156 | 6 | 8 | 282 | 10 | 267 | 2.13e-48 | 162 |
| MS.gene40823.t1 | MTR_1g079350 | 37.282 | 287 | 153 | 11 | 8 | 282 | 4 | 275 | 9.26e-47 | 158 |
| MS.gene40823.t1 | MTR_2g079100 | 35.507 | 276 | 151 | 7 | 8 | 279 | 9 | 261 | 2.94e-44 | 151 |
| MS.gene40823.t1 | MTR_1g079340 | 36.519 | 293 | 158 | 10 | 8 | 282 | 43 | 325 | 6.26e-44 | 152 |
| MS.gene40823.t1 | MTR_3g006850 | 33.225 | 307 | 169 | 7 | 6 | 282 | 15 | 315 | 6.37e-42 | 146 |
| MS.gene40823.t1 | MTR_3g450990 | 32.881 | 295 | 157 | 8 | 8 | 282 | 10 | 283 | 8.25e-39 | 137 |
| MS.gene40823.t1 | MTR_7g096300 | 36.641 | 262 | 135 | 8 | 9 | 263 | 5 | 242 | 5.10e-38 | 142 |
| MS.gene40823.t1 | MTR_1g079130 | 39.791 | 191 | 97 | 6 | 108 | 282 | 1 | 189 | 2.30e-33 | 120 |
| MS.gene40823.t1 | MTR_1g078470 | 40.000 | 190 | 97 | 5 | 93 | 282 | 12 | 184 | 2.45e-33 | 120 |
| MS.gene40823.t1 | MTR_7g103380 | 24.913 | 289 | 180 | 6 | 7 | 281 | 18 | 283 | 6.85e-25 | 101 |
| MS.gene40823.t1 | MTR_1g079240 | 35.176 | 199 | 105 | 5 | 87 | 282 | 2 | 179 | 7.56e-24 | 95.5 |
| MS.gene40823.t1 | MTR_0113s0040 | 25.085 | 295 | 175 | 10 | 1 | 282 | 15 | 276 | 8.49e-24 | 98.2 |
| MS.gene40823.t1 | MTR_1g101390 | 35.135 | 148 | 94 | 2 | 6 | 153 | 26 | 171 | 5.84e-22 | 93.2 |
| MS.gene40823.t1 | MTR_0002s0020 | 31.000 | 200 | 116 | 5 | 11 | 192 | 25 | 220 | 8.79e-22 | 92.8 |
| MS.gene40823.t1 | MTR_4g102770 | 25.172 | 290 | 166 | 9 | 8 | 281 | 19 | 273 | 1.82e-19 | 86.3 |
| MS.gene40823.t1 | MTR_1g079350 | 40.000 | 130 | 72 | 3 | 11 | 136 | 7 | 134 | 5.50e-19 | 83.6 |
| MS.gene40823.t1 | MTR_4g083970 | 27.731 | 238 | 127 | 8 | 52 | 282 | 91 | 290 | 1.30e-16 | 78.6 |
| MS.gene40823.t1 | MTR_7g096310 | 41.667 | 96 | 54 | 1 | 77 | 172 | 49 | 142 | 2.89e-15 | 72.4 |
| MS.gene40823.t1 | MTR_5g010800 | 27.219 | 169 | 113 | 5 | 3 | 168 | 12 | 173 | 3.40e-15 | 74.3 |
| MS.gene40823.t1 | MTR_1g076870 | 35.252 | 139 | 75 | 6 | 135 | 263 | 2 | 135 | 3.39e-14 | 68.6 |
| MS.gene40823.t1 | MTR_2g042540 | 29.286 | 140 | 84 | 4 | 11 | 150 | 7 | 131 | 9.56e-13 | 64.3 |
| MS.gene40823.t1 | MTR_1g078460 | 36.782 | 87 | 52 | 2 | 7 | 93 | 66 | 149 | 7.91e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40823.t1 | AT1G09155 | 45.583 | 283 | 138 | 9 | 11 | 282 | 3 | 280 | 9.41e-76 | 233 |
| MS.gene40823.t1 | AT2G02240 | 40.433 | 277 | 145 | 4 | 6 | 281 | 59 | 316 | 1.13e-67 | 213 |
| MS.gene40823.t1 | AT1G56240 | 46.619 | 281 | 136 | 8 | 11 | 281 | 4 | 280 | 4.87e-67 | 210 |
| MS.gene40823.t1 | AT1G56250 | 45.390 | 282 | 140 | 8 | 11 | 282 | 4 | 281 | 1.85e-66 | 209 |
| MS.gene40823.t1 | AT2G02360 | 39.716 | 282 | 139 | 7 | 6 | 281 | 12 | 268 | 1.50e-63 | 201 |
| MS.gene40823.t1 | AT2G02230 | 36.334 | 311 | 159 | 6 | 5 | 282 | 29 | 333 | 4.38e-63 | 202 |
| MS.gene40823.t1 | AT2G02250 | 38.768 | 276 | 148 | 6 | 8 | 281 | 47 | 303 | 3.90e-61 | 196 |
| MS.gene40823.t1 | AT1G80110 | 38.652 | 282 | 138 | 6 | 8 | 281 | 1 | 255 | 9.56e-59 | 188 |
| MS.gene40823.t1 | AT2G02340 | 36.879 | 282 | 158 | 7 | 6 | 281 | 34 | 301 | 5.70e-55 | 180 |
| MS.gene40823.t1 | AT2G02320 | 35.714 | 280 | 155 | 7 | 7 | 281 | 39 | 298 | 5.43e-50 | 167 |
| MS.gene40823.t1 | AT2G02310 | 36.299 | 281 | 156 | 4 | 6 | 282 | 43 | 304 | 6.58e-50 | 167 |
| MS.gene40823.t1 | AT2G02350 | 36.014 | 286 | 154 | 7 | 3 | 281 | 19 | 282 | 2.77e-48 | 162 |
| MS.gene40823.t1 | AT2G02300 | 34.948 | 289 | 141 | 11 | 4 | 282 | 30 | 281 | 8.03e-47 | 158 |
| MS.gene40823.t1 | AT5G24560 | 40.659 | 182 | 95 | 2 | 7 | 188 | 2 | 170 | 5.14e-41 | 140 |
| MS.gene40823.t1 | AT3G53000 | 25.862 | 290 | 175 | 8 | 7 | 281 | 20 | 284 | 7.17e-26 | 103 |
| MS.gene40823.t1 | AT3G61060 | 25.260 | 289 | 163 | 8 | 11 | 282 | 28 | 280 | 1.71e-21 | 92.0 |
| MS.gene40823.t1 | AT5G52120 | 33.987 | 153 | 95 | 3 | 7 | 154 | 20 | 171 | 3.00e-21 | 91.3 |
| MS.gene40823.t1 | AT1G63090 | 34.756 | 164 | 98 | 3 | 7 | 168 | 25 | 181 | 9.04e-21 | 90.1 |
| MS.gene40823.t1 | AT3G61060 | 25.260 | 289 | 164 | 8 | 11 | 282 | 28 | 281 | 2.94e-20 | 88.6 |
| MS.gene40823.t1 | AT1G12710 | 30.488 | 164 | 105 | 4 | 7 | 168 | 27 | 183 | 1.72e-16 | 78.2 |
| MS.gene40823.t1 | AT4G19850 | 32.500 | 240 | 115 | 11 | 54 | 282 | 15 | 218 | 5.58e-16 | 75.5 |
| MS.gene40823.t1 | AT2G02350 | 32.298 | 161 | 87 | 5 | 127 | 281 | 21 | 165 | 2.97e-15 | 72.4 |
| MS.gene40823.t1 | AT4G19850 | 35.079 | 191 | 82 | 9 | 102 | 282 | 18 | 176 | 3.19e-15 | 72.4 |
| MS.gene40823.t1 | AT4G19840 | 26.923 | 234 | 133 | 8 | 53 | 282 | 46 | 245 | 6.66e-14 | 70.1 |
| MS.gene40823.t1 | AT1G65390 | 27.322 | 183 | 97 | 6 | 106 | 282 | 258 | 410 | 2.17e-12 | 67.0 |
| MS.gene40823.t1 | AT1G12710 | 28.667 | 150 | 100 | 3 | 7 | 154 | 27 | 171 | 4.17e-11 | 63.2 |
Find 69 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCAAGTTTACCTTGATTC+AGG | 0.264823 | 1.2:-59832275 | None:intergenic |
| ATAGTCAAACATATTTATTT+TGG | 0.292667 | 1.2:-59834744 | None:intergenic |
| CTTTAAATTGGACAAGTATT+CGG | 0.294296 | 1.2:+59832169 | MS.gene40823:CDS |
| CAAATTGATAGAAGATAATA+AGG | 0.294509 | 1.2:+59834566 | MS.gene40823:CDS |
| TGTTATGTAGAGCTTTAAAT+TGG | 0.303998 | 1.2:+59832157 | MS.gene40823:intron |
| ATATTCGAGTTCCATCTAAA+AGG | 0.307761 | 1.2:+59834589 | MS.gene40823:CDS |
| ATGGCCAACAAAGTGCAAAA+TGG | 0.309663 | 1.2:+59834471 | MS.gene40823:CDS |
| TTTAAATTGGACAAGTATTC+GGG | 0.325991 | 1.2:+59832170 | MS.gene40823:CDS |
| GGAGGTTAAGATTAGTGTTA+TGG | 0.327028 | 1.2:+59834668 | MS.gene40823:CDS |
| GTGAGCTGGTTAGAGATTAA+AGG | 0.341543 | 1.2:+59834333 | MS.gene40823:CDS |
| TTGGAGAGTGAGGGGATTGA+GGG | 0.352874 | 1.2:-59831877 | None:intergenic |
| TAGAGATTAAAGGCAAAATA+AGG | 0.357825 | 1.2:+59834343 | MS.gene40823:CDS |
| ATTGGAGAGTGAGGGGATTG+AGG | 0.387212 | 1.2:-59831878 | None:intergenic |
| TGGGTGGATGGAAATTGAAT+TGG | 0.398175 | 1.2:+59834617 | MS.gene40823:CDS |
| AAGATTAGTGTTATGGAGGT+TGG | 0.420611 | 1.2:+59834675 | MS.gene40823:CDS |
| GTTTATATGAAGAACAAGAT+TGG | 0.427696 | 1.2:-59831896 | None:intergenic |
| TGGCCAACAAAGTGCAAAAT+GGG | 0.432183 | 1.2:+59834472 | MS.gene40823:CDS |
| TGTCTAGGAGCAGAGGTTGT+TGG | 0.444959 | 1.2:-59831938 | None:intergenic |
| AACAACCTCTGCTCCTAGAC+AGG | 0.445484 | 1.2:+59831940 | MS.gene40823:CDS |
| TTACTATGTGGCCCCTGTCT+AGG | 0.447226 | 1.2:-59831953 | None:intergenic |
| TTGACAATTCTCTTGCAGAT+AGG | 0.453970 | 1.2:-59832208 | None:intergenic |
| TAAACAACGTAAGTCGTGTT+TGG | 0.468253 | 1.2:-59834381 | None:intergenic |
| GGAGTAATGATCCATTGTAT+TGG | 0.470028 | 1.2:+59832237 | MS.gene40823:CDS |
| AAGGGTGGTCTCATCGTTGA+AGG | 0.481480 | 1.2:+59834708 | MS.gene40823:CDS |
| TATTCGAGTTCCATCTAAAA+GGG | 0.481762 | 1.2:+59834590 | MS.gene40823:CDS |
| GGGTGGATGGAAATTGAATT+GGG | 0.484481 | 1.2:+59834618 | MS.gene40823:CDS |
| GTTCCATCTAAAAGGGATGA+TGG | 0.488515 | 1.2:+59834597 | MS.gene40823:CDS |
| GGAGGTTGGTTATAGACTGA+AGG | 0.490832 | 1.2:+59834689 | MS.gene40823:CDS |
| TGATGCATGTAATTTCTCAA+TGG | 0.493376 | 1.2:+59831767 | MS.gene40823:CDS |
| CAGCTAACTCTGACTCACTT+TGG | 0.504992 | 1.2:+59831811 | MS.gene40823:CDS |
| ATGATCCATTGTATTGGAGC+TGG | 0.508075 | 1.2:+59832243 | MS.gene40823:CDS |
| GGTTAAGATTAGTGTTATGG+AGG | 0.508835 | 1.2:+59834671 | MS.gene40823:CDS |
| AGAACAAGATTGGAGAGTGA+GGG | 0.522398 | 1.2:-59831886 | None:intergenic |
| AAGAACAAGATTGGAGAGTG+AGG | 0.528278 | 1.2:-59831887 | None:intergenic |
| TTATGAAAAGCATAGAAAGA+TGG | 0.529657 | 1.2:+59834536 | MS.gene40823:CDS |
| ATTGCAACTGATACCTCAGC+TGG | 0.529997 | 1.2:-59834450 | None:intergenic |
| CAGAATCAAGTCCGTACATA+CGG | 0.539261 | 1.2:-59834425 | None:intergenic |
| CAAGAGAATTGTCAATAACA+TGG | 0.547861 | 1.2:+59832216 | MS.gene40823:CDS |
| AAGGTTTCACACCGTATGTA+CGG | 0.553117 | 1.2:+59834414 | MS.gene40823:CDS |
| GGAGATCATCTCCTGAATCA+AGG | 0.554634 | 1.2:+59832264 | MS.gene40823:CDS |
| GAACAAGATTGGAGAGTGAG+GGG | 0.559662 | 1.2:-59831885 | None:intergenic |
| TTCCATCTAAAAGGGATGAT+GGG | 0.560247 | 1.2:+59834598 | MS.gene40823:CDS |
| AGCTGAGGTATCAGTTGCAA+TGG | 0.570422 | 1.2:+59834452 | MS.gene40823:CDS |
| CTCCGGCAGAGTATCTATGT+TGG | 0.572603 | 1.2:-59831706 | None:intergenic |
| TAAAAGGGATGATGGGTGGA+TGG | 0.573430 | 1.2:+59834605 | MS.gene40823:CDS |
| CAGATTCGCAGAGGTGGCTG+AGG | 0.573616 | 1.2:+59834302 | MS.gene40823:intron |
| TGGCCCCTGTCTAGGAGCAG+AGG | 0.574396 | 1.2:-59831945 | None:intergenic |
| CTCCAACATAGATACTCTGC+CGG | 0.588866 | 1.2:+59831704 | MS.gene40823:CDS |
| GAGAAATTACATGCATCAAG+TGG | 0.592564 | 1.2:-59831762 | None:intergenic |
| GAGGTTGGTTATAGACTGAA+GGG | 0.594688 | 1.2:+59834690 | MS.gene40823:CDS |
| GATCTCCAGCTCCAATACAA+TGG | 0.602031 | 1.2:-59832248 | None:intergenic |
| GAAAAGCATAGAAAGATGGA+AGG | 0.602899 | 1.2:+59834540 | MS.gene40823:CDS |
| CTGAGGTAAGAACAGTGAGC+TGG | 0.605200 | 1.2:+59834319 | MS.gene40823:CDS |
| AGCTGCTGAATGCAAAGTTG+AGG | 0.612428 | 1.2:-59831793 | None:intergenic |
| ACTTGATTCTGCGCCAGCTG+AGG | 0.612928 | 1.2:+59834437 | MS.gene40823:CDS |
| ACAACCTCTGCTCCTAGACA+GGG | 0.614985 | 1.2:+59831941 | MS.gene40823:CDS |
| ATACCGCAGATTCGCAGAGG+TGG | 0.620226 | 1.2:+59834296 | MS.gene40823:intron |
| CGTTGTTTATCTCATCACAA+AGG | 0.620339 | 1.2:+59834395 | MS.gene40823:CDS |
| CAACAAAGTGCAAAATGGGA+TGG | 0.622257 | 1.2:+59834476 | MS.gene40823:CDS |
| CATCTAAAAGGGATGATGGG+TGG | 0.630515 | 1.2:+59834601 | MS.gene40823:CDS |
| ATGATGTCTTCATAGTCAGA+TGG | 0.630520 | 1.2:-59831846 | None:intergenic |
| TTTCTGTGGTGAAGTTGACA+TGG | 0.640269 | 1.2:+59834647 | MS.gene40823:CDS |
| CAACATAGATACTCTGCCGG+AGG | 0.653807 | 1.2:+59831707 | MS.gene40823:CDS |
| CTGTGGTGAAGTTGACATGG+AGG | 0.689911 | 1.2:+59834650 | MS.gene40823:CDS |
| ATGATACCGCAGATTCGCAG+AGG | 0.694943 | 1.2:+59834293 | MS.gene40823:intron |
| TTTGTACAATAAATACGAGG+AGG | 0.700943 | 1.2:+59834503 | MS.gene40823:CDS |
| CAACCTCTGCTCCTAGACAG+GGG | 0.708819 | 1.2:+59831942 | MS.gene40823:CDS |
| GTTGGTTATAGACTGAAGGG+TGG | 0.721602 | 1.2:+59834693 | MS.gene40823:CDS |
| ATATTTGTACAATAAATACG+AGG | 0.779887 | 1.2:+59834500 | MS.gene40823:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTAATATTTTTTT+AGG | + | chr1.2:59833422-59833441 | MS.gene40823:intron | 0.0% |
| !!! | AATATTTTAATATTTTTTTA+GGG | + | chr1.2:59833423-59833442 | MS.gene40823:intron | 0.0% |
| !! | TTTATTTATGTTAAAAATGT+TGG | + | chr1.2:59834094-59834113 | MS.gene40823:intron | 10.0% |
| !!! | AAAATTTTAAACTTTTTAGA+AGG | - | chr1.2:59833028-59833047 | None:intergenic | 10.0% |
| !!! | TAAAAGAATATTTTTACTTT+TGG | + | chr1.2:59832873-59832892 | MS.gene40823:intron | 10.0% |
| !! | AACAAGTTAAGAATTAAAAA+AGG | - | chr1.2:59833084-59833103 | None:intergenic | 15.0% |
| !! | AATTAAATATAAACGTGATA+AGG | - | chr1.2:59832611-59832630 | None:intergenic | 15.0% |
| !! | GAATAATTGAATTAAACATT+TGG | - | chr1.2:59832341-59832360 | None:intergenic | 15.0% |
| !! | TTGTTGTAATTGAAATTAAT+TGG | - | chr1.2:59831992-59832011 | None:intergenic | 15.0% |
| !! | TTTAATTATCTTCAACAAAT+AGG | - | chr1.2:59833353-59833372 | None:intergenic | 15.0% |
| !!! | AATTTGTGTTATTTTATTTG+AGG | - | chr1.2:59832399-59832418 | None:intergenic | 15.0% |
| !!! | ATTATGAATCCATTTTTTAA+TGG | - | chr1.2:59833161-59833180 | None:intergenic | 15.0% |
| !!! | ATTTGTGTTATTTTATTTGA+GGG | - | chr1.2:59832398-59832417 | None:intergenic | 15.0% |
| !!! | TTAAAAAGACATTTTTAATG+AGG | - | chr1.2:59833722-59833741 | None:intergenic | 15.0% |
| !!! | TTATGAATCCATTTTTTAAT+GGG | - | chr1.2:59833160-59833179 | None:intergenic | 15.0% |
| !! | AAAGTCTCATCATTTAAAAA+TGG | - | chr1.2:59833216-59833235 | None:intergenic | 20.0% |
| !! | AAGTCTCATCATTTAAAAAT+GGG | - | chr1.2:59833215-59833234 | None:intergenic | 20.0% |
| !! | ATATTTGTACAATAAATACG+AGG | + | chr1.2:59834500-59834519 | MS.gene40823:CDS | 20.0% |
| !! | CAAATTGATAGAAGATAATA+AGG | + | chr1.2:59834566-59834585 | MS.gene40823:CDS | 20.0% |
| !! | TAGGATGGTATATTATTAAA+GGG | + | chr1.2:59833907-59833926 | MS.gene40823:intron | 20.0% |
| !! | TTGTAATTGAAATTAATTGG+AGG | - | chr1.2:59831989-59832008 | None:intergenic | 20.0% |
| !!! | ACACTCTGTTTTTTTTTTTT+TGG | - | chr1.2:59833251-59833270 | None:intergenic | 20.0% |
| !!! | ATCTTTTCTCGAAAAATAAT+AGG | - | chr1.2:59833622-59833641 | None:intergenic | 20.0% |
| !!! | CATAATTTTTATGTGAATCT+CGG | + | chr1.2:59833175-59833194 | MS.gene40823:intron | 20.0% |
| !!! | TAATTAAATTTTAGAGTGCT+CGG | + | chr1.2:59833641-59833660 | MS.gene40823:intron | 20.0% |
| !!! | TCAATACTCTTAACATTTTT+AGG | - | chr1.2:59834168-59834187 | None:intergenic | 20.0% |
| ! | AACCTTCTTTCTAAATCTAA+TGG | - | chr1.2:59833852-59833871 | None:intergenic | 25.0% |
| ! | AATGTTAAGATCATCTTCAA+TGG | + | chr1.2:59833568-59833587 | MS.gene40823:intron | 25.0% |
| ! | AGGTATAGAACAAATCTTAT+CGG | - | chr1.2:59832569-59832588 | None:intergenic | 25.0% |
| ! | ATCAATTGTTAGAATCAACA+CGG | - | chr1.2:59832114-59832133 | None:intergenic | 25.0% |
| ! | CTAGGATGGTATATTATTAA+AGG | + | chr1.2:59833906-59833925 | MS.gene40823:intron | 25.0% |
| ! | CTTTAAATTGGACAAGTATT+CGG | + | chr1.2:59832169-59832188 | MS.gene40823:CDS | 25.0% |
| ! | GTAAGTTTATTAAAGACCAT+TGG | - | chr1.2:59834269-59834288 | None:intergenic | 25.0% |
| ! | GTTATGGAAAAAGGAATATA+TGG | + | chr1.2:59833327-59833346 | MS.gene40823:intron | 25.0% |
| ! | GTTTATATGAAGAACAAGAT+TGG | - | chr1.2:59831899-59831918 | None:intergenic | 25.0% |
| ! | TAATAATATACCATCCTAGT+GGG | - | chr1.2:59833905-59833924 | None:intergenic | 25.0% |
| ! | TAATTGAAATTAATTGGAGG+TGG | - | chr1.2:59831986-59832005 | None:intergenic | 25.0% |
| ! | TAGAGATTAAAGGCAAAATA+AGG | + | chr1.2:59834343-59834362 | MS.gene40823:CDS | 25.0% |
| ! | TGAATTAAACATTTGGATTC+AGG | - | chr1.2:59832334-59832353 | None:intergenic | 25.0% |
| ! | TTAATAATATACCATCCTAG+TGG | - | chr1.2:59833906-59833925 | None:intergenic | 25.0% |
| ! | TTGGAATTCTACAATAAACA+TGG | + | chr1.2:59833668-59833687 | MS.gene40823:intron | 25.0% |
| ! | TTTAAATTGGACAAGTATTC+GGG | + | chr1.2:59832170-59832189 | MS.gene40823:CDS | 25.0% |
| !! | ACATTTTTAATGAGGACAAA+TGG | - | chr1.2:59833714-59833733 | None:intergenic | 25.0% |
| !! | ATGTAGTTTTTGCAAAATCA+CGG | + | chr1.2:59832072-59832091 | MS.gene40823:intron | 25.0% |
| !! | TTATGAAAAGCATAGAAAGA+TGG | + | chr1.2:59834536-59834555 | MS.gene40823:CDS | 25.0% |
| !!! | AAATGTTAAGAGTATTGAGT+CGG | + | chr1.2:59834170-59834189 | MS.gene40823:intron | 25.0% |
| !!! | TGTTATGTAGAGCTTTAAAT+TGG | + | chr1.2:59832157-59832176 | MS.gene40823:intron | 25.0% |
| !!! | TTTAGAAAGAAGGTTTTGAA+TGG | + | chr1.2:59833857-59833876 | MS.gene40823:intron | 25.0% |
| ACTTTAAGTCACAAGTTAGT+AGG | + | chr1.2:59832771-59832790 | MS.gene40823:intron | 30.0% | |
| AGCCATTAGATTTAGAAAGA+AGG | + | chr1.2:59833847-59833866 | MS.gene40823:intron | 30.0% | |
| ATAACTAGTCAACTTACGTT+AGG | - | chr1.2:59833312-59833331 | None:intergenic | 30.0% | |
| CAAGAGAATTGTCAATAACA+TGG | + | chr1.2:59832216-59832235 | MS.gene40823:CDS | 30.0% | |
| CCTTATGACCCATTAAAAAA+TGG | + | chr1.2:59833149-59833168 | MS.gene40823:intron | 30.0% | |
| GCATGATAAGCTTAAACAAA+AGG | - | chr1.2:59832312-59832331 | None:intergenic | 30.0% | |
| TCTTAACACGTGTCTTTAAA+AGG | - | chr1.2:59832929-59832948 | None:intergenic | 30.0% | |
| TGATGCATGTAATTTCTCAA+TGG | + | chr1.2:59831767-59831786 | MS.gene40823:CDS | 30.0% | |
| TTCTTTCTAAATCTAATGGC+TGG | - | chr1.2:59833848-59833867 | None:intergenic | 30.0% | |
| TTTAAACCATTTGTCCTCAA+TGG | + | chr1.2:59833737-59833756 | MS.gene40823:intron | 30.0% | |
| TTTGTACAATAAATACGAGG+AGG | + | chr1.2:59834503-59834522 | MS.gene40823:CDS | 30.0% | |
| ! | AATTTGTGTTATTAACGTGC+AGG | - | chr1.2:59832369-59832388 | None:intergenic | 30.0% |
| ! | AGTTGACTAGTTATGGAAAA+AGG | + | chr1.2:59833318-59833337 | MS.gene40823:intron | 30.0% |
| ! | ATATTCGAGTTCCATCTAAA+AGG | + | chr1.2:59834589-59834608 | MS.gene40823:CDS | 30.0% |
| ! | TAACGTAAGTTGACTAGTTA+TGG | + | chr1.2:59833311-59833330 | MS.gene40823:intron | 30.0% |
| ! | TATTCGAGTTCCATCTAAAA+GGG | + | chr1.2:59834590-59834609 | MS.gene40823:CDS | 30.0% |
| ! | TTTTAATGAGGACAAATGGT+GGG | - | chr1.2:59833710-59833729 | None:intergenic | 30.0% |
| ! | TTTTTAATGAGGACAAATGG+TGG | - | chr1.2:59833711-59833730 | None:intergenic | 30.0% |
| !! | TCTTAACTTGTTCTCCTATA+GGG | + | chr1.2:59833092-59833111 | MS.gene40823:intron | 30.0% |
| !! | TTCTTAACTTGTTCTCCTAT+AGG | + | chr1.2:59833091-59833110 | MS.gene40823:intron | 30.0% |
| !!! | ATTTTTGAAACACAATCCTC+CGG | - | chr1.2:59831726-59831745 | None:intergenic | 30.0% |
| !!! | CCATTTTTTAATGGGTCATA+AGG | - | chr1.2:59833152-59833171 | None:intergenic | 30.0% |
| AAATTGTAGTCTCCTACTGT+AGG | - | chr1.2:59833795-59833814 | None:intergenic | 35.0% | |
| AAGATTAGTGTTATGGAGGT+TGG | + | chr1.2:59834675-59834694 | MS.gene40823:CDS | 35.0% | |
| AAGCAAGTTTACCTTGATTC+AGG | - | chr1.2:59832278-59832297 | None:intergenic | 35.0% | |
| ATGATGTCTTCATAGTCAGA+TGG | - | chr1.2:59831849-59831868 | None:intergenic | 35.0% | |
| CAATGAGTTTGACAGAATCA+TGG | + | chr1.2:59832041-59832060 | MS.gene40823:intron | 35.0% | |
| CGACACCTTAATTAAAACGT+GGG | + | chr1.2:59832683-59832702 | MS.gene40823:intron | 35.0% | |
| CGTTGTTTATCTCATCACAA+AGG | + | chr1.2:59834395-59834414 | MS.gene40823:CDS | 35.0% | |
| GAGAAATTACATGCATCAAG+TGG | - | chr1.2:59831765-59831784 | None:intergenic | 35.0% | |
| GATGATGTAAGCAAGATATG+TGG | - | chr1.2:59832519-59832538 | None:intergenic | 35.0% | |
| GGAGGTTAAGATTAGTGTTA+TGG | + | chr1.2:59834668-59834687 | MS.gene40823:CDS | 35.0% | |
| GGAGTAATGATCCATTGTAT+TGG | + | chr1.2:59832237-59832256 | MS.gene40823:CDS | 35.0% | |
| GGTTAAGATTAGTGTTATGG+AGG | + | chr1.2:59834671-59834690 | MS.gene40823:CDS | 35.0% | |
| TAAACAACGTAAGTCGTGTT+TGG | - | chr1.2:59834384-59834403 | None:intergenic | 35.0% | |
| TAATTAAAACGTGGGAGGAT+GGG | + | chr1.2:59832691-59832710 | MS.gene40823:intron | 35.0% | |
| TTAATTAAAACGTGGGAGGA+TGG | + | chr1.2:59832690-59832709 | MS.gene40823:intron | 35.0% | |
| TTCCATCTAAAAGGGATGAT+GGG | + | chr1.2:59834598-59834617 | MS.gene40823:CDS | 35.0% | |
| TTGACAATTCTCTTGCAGAT+AGG | - | chr1.2:59832211-59832230 | None:intergenic | 35.0% | |
| TTTAATGAGGACAAATGGTG+GGG | - | chr1.2:59833709-59833728 | None:intergenic | 35.0% | |
| ! | GAAAAGCATAGAAAGATGGA+AGG | + | chr1.2:59834540-59834559 | MS.gene40823:CDS | 35.0% |
| ! | TAGTTTTTGCAAAATCACGG+TGG | + | chr1.2:59832075-59832094 | MS.gene40823:intron | 35.0% |
| !! | ATGGAAATGGTCGTCATTTT+TGG | - | chr1.2:59834239-59834258 | None:intergenic | 35.0% |
| !!! | AAAGGGTGTTTTTGTCATGA+AGG | + | chr1.2:59833924-59833943 | MS.gene40823:intron | 35.0% |
| !!! | ATCCTCCCACGTTTTAATTA+AGG | - | chr1.2:59832691-59832710 | None:intergenic | 35.0% |
| !!! | CCACGTTTTAATTAAGGTGT+CGG | - | chr1.2:59832685-59832704 | None:intergenic | 35.0% |
| !!! | TTAAATTTTAGAGTGCTCGG+TGG | + | chr1.2:59833644-59833663 | MS.gene40823:intron | 35.0% |
| AAGAACAAGATTGGAGAGTG+AGG | - | chr1.2:59831890-59831909 | None:intergenic | 40.0% | |
| AAGGTTTCACACCGTATGTA+CGG | + | chr1.2:59834414-59834433 | MS.gene40823:CDS | 40.0% | |
| AATGACGACCATTTCCATTG+CGG | + | chr1.2:59834241-59834260 | MS.gene40823:intron | 40.0% | |
| AGAACAAGATTGGAGAGTGA+GGG | - | chr1.2:59831889-59831908 | None:intergenic | 40.0% | |
| ATCAATCGAAGAATCTCACG+AGG | - | chr1.2:59834043-59834062 | None:intergenic | 40.0% | |
| ATGATCCATTGTATTGGAGC+TGG | + | chr1.2:59832243-59832262 | MS.gene40823:CDS | 40.0% | |
| ATGCTGGTGGTAACATTGTT+GGG | - | chr1.2:59833981-59834000 | None:intergenic | 40.0% | |
| ATGGCCAACAAAGTGCAAAA+TGG | + | chr1.2:59834471-59834490 | MS.gene40823:CDS | 40.0% | |
| CAACAAAGTGCAAAATGGGA+TGG | + | chr1.2:59834476-59834495 | MS.gene40823:CDS | 40.0% | |
| CACCTTAATTAAAACGTGGG+AGG | + | chr1.2:59832686-59832705 | MS.gene40823:intron | 40.0% | |
| CAGAATCAAGTCCGTACATA+CGG | - | chr1.2:59834428-59834447 | None:intergenic | 40.0% | |
| CCGACACCTTAATTAAAACG+TGG | + | chr1.2:59832682-59832701 | MS.gene40823:intron | 40.0% | |
| CTACGGTAGACAACCTTAAT+GGG | + | chr1.2:59833766-59833785 | MS.gene40823:intron | 40.0% | |
| GACATGCATGCAAACAAAGT+AGG | - | chr1.2:59832589-59832608 | None:intergenic | 40.0% | |
| GGGTGGATGGAAATTGAATT+GGG | + | chr1.2:59834618-59834637 | MS.gene40823:CDS | 40.0% | |
| GTGAGCTGGTTAGAGATTAA+AGG | + | chr1.2:59834333-59834352 | MS.gene40823:CDS | 40.0% | |
| GTTCCATCTAAAAGGGATGA+TGG | + | chr1.2:59834597-59834616 | MS.gene40823:CDS | 40.0% | |
| TGGCCAACAAAGTGCAAAAT+GGG | + | chr1.2:59834472-59834491 | MS.gene40823:CDS | 40.0% | |
| TGGGTGGATGGAAATTGAAT+TGG | + | chr1.2:59834617-59834636 | MS.gene40823:CDS | 40.0% | |
| TTTCTGTGGTGAAGTTGACA+TGG | + | chr1.2:59834647-59834666 | MS.gene40823:CDS | 40.0% | |
| ! | CATCCCATTTTGCACTTTGT+TGG | - | chr1.2:59834478-59834497 | None:intergenic | 40.0% |
| ! | CGAAATAACTTGTGCCCTAT+AGG | - | chr1.2:59833109-59833128 | None:intergenic | 40.0% |
| ! | GAATTGGGTGAGTTTTTCTG+TGG | + | chr1.2:59834633-59834652 | MS.gene40823:CDS | 40.0% |
| ! | GAGGTTGGTTATAGACTGAA+GGG | + | chr1.2:59834690-59834709 | MS.gene40823:CDS | 40.0% |
| ! | GGTGGATTCTACTTACTATG+TGG | - | chr1.2:59831968-59831987 | None:intergenic | 40.0% |
| !! | TCGTTTTAGTCCTGAACTTG+TGG | + | chr1.2:59833126-59833145 | MS.gene40823:intron | 40.0% |
| !! | TGTTAAGAGTATTGAGTCGG+AGG | + | chr1.2:59834173-59834192 | MS.gene40823:intron | 40.0% |
| AAAGACCATTGGATCCGCAA+TGG | - | chr1.2:59834258-59834277 | None:intergenic | 45.0% | |
| AAGAATCTCACGAGGATGCT+GGG | - | chr1.2:59834035-59834054 | None:intergenic | 45.0% | |
| AGCTGCTGAATGCAAAGTTG+AGG | - | chr1.2:59831796-59831815 | None:intergenic | 45.0% | |
| ATTGCAACTGATACCTCAGC+TGG | - | chr1.2:59834453-59834472 | None:intergenic | 45.0% | |
| CAGCTAACTCTGACTCACTT+TGG | + | chr1.2:59831811-59831830 | MS.gene40823:CDS | 45.0% | |
| CATTGGATCCGCAATGGAAA+TGG | - | chr1.2:59834252-59834271 | None:intergenic | 45.0% | |
| CATTTCCATTGCGGATCCAA+TGG | + | chr1.2:59834250-59834269 | MS.gene40823:intron | 45.0% | |
| CTACTGTAGGAGACCCATTA+AGG | - | chr1.2:59833782-59833801 | None:intergenic | 45.0% | |
| CTCCAACATAGATACTCTGC+CGG | + | chr1.2:59831704-59831723 | MS.gene40823:CDS | 45.0% | |
| GAACAAGATTGGAGAGTGAG+GGG | - | chr1.2:59831888-59831907 | None:intergenic | 45.0% | |
| GATCTCCAGCTCCAATACAA+TGG | - | chr1.2:59832251-59832270 | None:intergenic | 45.0% | |
| GATGCTGGTGGTAACATTGT+TGG | - | chr1.2:59833982-59834001 | None:intergenic | 45.0% | |
| GCGAATCTGCGGTATCATTA+AGG | - | chr1.2:59834291-59834310 | None:intergenic | 45.0% | |
| GCTACGGTAGACAACCTTAA+TGG | + | chr1.2:59833765-59833784 | MS.gene40823:intron | 45.0% | |
| GGAGATCATCTCCTGAATCA+AGG | + | chr1.2:59832264-59832283 | MS.gene40823:CDS | 45.0% | |
| GTGGTAACATTGTTGGGGAA+GGG | - | chr1.2:59833975-59833994 | None:intergenic | 45.0% | |
| GTTGGTTATAGACTGAAGGG+TGG | + | chr1.2:59834693-59834712 | MS.gene40823:CDS | 45.0% | |
| TGCTGGTGGTAACATTGTTG+GGG | - | chr1.2:59833980-59833999 | None:intergenic | 45.0% | |
| ! | AGCTGAGGTATCAGTTGCAA+TGG | + | chr1.2:59834452-59834471 | MS.gene40823:CDS | 45.0% |
| ! | CACCCATCATCCCTTTTAGA+TGG | - | chr1.2:59834603-59834622 | None:intergenic | 45.0% |
| ! | CTTAATGGGTCTCCTACAGT+AGG | + | chr1.2:59833780-59833799 | MS.gene40823:intron | 45.0% |
| ! | GGAGGTTGGTTATAGACTGA+AGG | + | chr1.2:59834689-59834708 | MS.gene40823:CDS | 45.0% |
| !! | CATCTAAAAGGGATGATGGG+TGG | + | chr1.2:59834601-59834620 | MS.gene40823:CDS | 45.0% |
| !! | TAAAAGGGATGATGGGTGGA+TGG | + | chr1.2:59834605-59834624 | MS.gene40823:CDS | 45.0% |
| !!! | TTTTAGAGTGCTCGGTGGAT+TGG | + | chr1.2:59833649-59833668 | MS.gene40823:intron | 45.0% |
| AAAACGTGGGAGGATGGGAT+GGG | + | chr1.2:59832696-59832715 | MS.gene40823:intron | 50.0% | |
| AACAACCTCTGCTCCTAGAC+AGG | + | chr1.2:59831940-59831959 | MS.gene40823:CDS | 50.0% | |
| AAGGGTGGTCTCATCGTTGA+AGG | + | chr1.2:59834708-59834727 | MS.gene40823:CDS | 50.0% | |
| ACAACCTCTGCTCCTAGACA+GGG | + | chr1.2:59831941-59831960 | MS.gene40823:CDS | 50.0% | |
| ACATTGTTGGGGAAGGGAAC+TGG | - | chr1.2:59833969-59833988 | None:intergenic | 50.0% | |
| ATGATACCGCAGATTCGCAG+AGG | + | chr1.2:59834293-59834312 | MS.gene40823:intron | 50.0% | |
| ATTGGAGAGTGAGGGGATTG+AGG | - | chr1.2:59831881-59831900 | None:intergenic | 50.0% | |
| CAACATAGATACTCTGCCGG+AGG | + | chr1.2:59831707-59831726 | MS.gene40823:CDS | 50.0% | |
| CATTGTTGGGGAAGGGAACT+GGG | - | chr1.2:59833968-59833987 | None:intergenic | 50.0% | |
| CCAACGCCATTGAGGACAAA+TGG | - | chr1.2:59833746-59833765 | None:intergenic | 50.0% | |
| CCATTTGTCCTCAATGGCGT+TGG | + | chr1.2:59833743-59833762 | MS.gene40823:intron | 50.0% | |
| CTGAGGTAAGAACAGTGAGC+TGG | + | chr1.2:59834319-59834338 | MS.gene40823:CDS | 50.0% | |
| CTGTGGTGAAGTTGACATGG+AGG | + | chr1.2:59834650-59834669 | MS.gene40823:CDS | 50.0% | |
| GAAGAATCTCACGAGGATGC+TGG | - | chr1.2:59834036-59834055 | None:intergenic | 50.0% | |
| GGGAATGTATGCAGCTTGCA+AGG | - | chr1.2:59834015-59834034 | None:intergenic | 50.0% | |
| GGTCATAAGGCCACAAGTTC+AGG | - | chr1.2:59833139-59833158 | None:intergenic | 50.0% | |
| GGTGGTAACATTGTTGGGGA+AGG | - | chr1.2:59833976-59833995 | None:intergenic | 50.0% | |
| TAAAACGTGGGAGGATGGGA+TGG | + | chr1.2:59832695-59832714 | MS.gene40823:intron | 50.0% | |
| TGTCTAGGAGCAGAGGTTGT+TGG | - | chr1.2:59831941-59831960 | None:intergenic | 50.0% | |
| TGTTTGCAGCATGACCCACT+AGG | + | chr1.2:59833888-59833907 | MS.gene40823:intron | 50.0% | |
| TTACTATGTGGCCCCTGTCT+AGG | - | chr1.2:59831956-59831975 | None:intergenic | 50.0% | |
| TTGGAGAGTGAGGGGATTGA+GGG | - | chr1.2:59831880-59831899 | None:intergenic | 50.0% | |
| ! | CTCCGGCAGAGTATCTATGT+TGG | - | chr1.2:59831709-59831728 | None:intergenic | 50.0% |
| ACTTGATTCTGCGCCAGCTG+AGG | + | chr1.2:59834437-59834456 | MS.gene40823:CDS | 55.0% | |
| ATACCGCAGATTCGCAGAGG+TGG | + | chr1.2:59834296-59834315 | MS.gene40823:intron | 55.0% | |
| CAACCTCTGCTCCTAGACAG+GGG | + | chr1.2:59831942-59831961 | MS.gene40823:CDS | 55.0% | |
| CAAGGAACACACGAGGATGC+TGG | - | chr1.2:59833997-59834016 | None:intergenic | 55.0% | |
| CAGCTTGCAAGGAACACACG+AGG | - | chr1.2:59834004-59834023 | None:intergenic | 55.0% | |
| TACCGTAGCCAACGCCATTG+AGG | - | chr1.2:59833754-59833773 | None:intergenic | 55.0% | |
| TGCAGCATGACCCACTAGGA+TGG | + | chr1.2:59833892-59833911 | MS.gene40823:intron | 55.0% | |
| !! | GTCCTCAATGGCGTTGGCTA+CGG | + | chr1.2:59833749-59833768 | MS.gene40823:intron | 55.0% |
| CAGATTCGCAGAGGTGGCTG+AGG | + | chr1.2:59834302-59834321 | MS.gene40823:intron | 60.0% | |
| CAGCCACCTCTGCGAATCTG+CGG | - | chr1.2:59834302-59834321 | None:intergenic | 60.0% | |
| GGAACACACGAGGATGCTGG+TGG | - | chr1.2:59833994-59834013 | None:intergenic | 60.0% | |
| TGGCCCCTGTCTAGGAGCAG+AGG | - | chr1.2:59831948-59831967 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 59831690 | 59834752 | 59831690 | ID=MS.gene40823 |
| chr1.2 | mRNA | 59831690 | 59834752 | 59831690 | ID=MS.gene40823.t1;Parent=MS.gene40823 |
| chr1.2 | exon | 59831690 | 59831971 | 59831690 | ID=MS.gene40823.t1.exon1;Parent=MS.gene40823.t1 |
| chr1.2 | CDS | 59831690 | 59831971 | 59831690 | ID=cds.MS.gene40823.t1;Parent=MS.gene40823.t1 |
| chr1.2 | exon | 59832167 | 59832285 | 59832167 | ID=MS.gene40823.t1.exon2;Parent=MS.gene40823.t1 |
| chr1.2 | CDS | 59832167 | 59832285 | 59832167 | ID=cds.MS.gene40823.t1;Parent=MS.gene40823.t1 |
| chr1.2 | exon | 59834305 | 59834752 | 59834305 | ID=MS.gene40823.t1.exon3;Parent=MS.gene40823.t1 |
| chr1.2 | CDS | 59834305 | 59834752 | 59834305 | ID=cds.MS.gene40823.t1;Parent=MS.gene40823.t1 |
| Gene Sequence |
| Protein sequence |
