Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42516.t1 | XP_013449617.1 | 98.6 | 414 | 6 | 0 | 1 | 414 | 1 | 414 | 3.30E-227 | 797.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42516.t1 | Q8GWE6 | 76.1 | 414 | 98 | 1 | 1 | 414 | 1 | 413 | 2.6e-172 | 606.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42516.t1 | A0A072UCR5 | 98.6 | 414 | 6 | 0 | 1 | 414 | 1 | 414 | 2.4e-227 | 797.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene42516 | 0.871985 | 4.50E-67 | -1.69E-46 |
| MS.gene049499 | MS.gene42516 | 0.810424 | 1.16E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene42516 | 0.802519 | 5.40E-49 | -1.69E-46 |
| MS.gene050213 | MS.gene42516 | 0.8132 | 2.89E-51 | -1.69E-46 |
| MS.gene050379 | MS.gene42516 | 0.80845 | 3.08E-50 | -1.69E-46 |
| MS.gene050414 | MS.gene42516 | 0.816038 | 6.80E-52 | -1.69E-46 |
| MS.gene050654 | MS.gene42516 | 0.815663 | 8.24E-52 | -1.69E-46 |
| MS.gene050945 | MS.gene42516 | 0.836305 | 1.01E-56 | -1.69E-46 |
| MS.gene051043 | MS.gene42516 | 0.803536 | 3.33E-49 | -1.69E-46 |
| MS.gene051226 | MS.gene42516 | 0.813116 | 3.01E-51 | -1.69E-46 |
| MS.gene051823 | MS.gene42516 | 0.809134 | 2.20E-50 | -1.69E-46 |
| MS.gene051959 | MS.gene42516 | 0.843844 | 1.09E-58 | -1.69E-46 |
| MS.gene051960 | MS.gene42516 | 0.845317 | 4.38E-59 | -1.69E-46 |
| MS.gene052016 | MS.gene42516 | 0.845495 | 3.92E-59 | -1.69E-46 |
| MS.gene052118 | MS.gene42516 | 0.822622 | 2.15E-53 | -1.69E-46 |
| MS.gene052533 | MS.gene42516 | 0.803843 | 2.87E-49 | -1.69E-46 |
| MS.gene053620 | MS.gene42516 | 0.80575 | 1.15E-49 | -1.69E-46 |
| MS.gene053726 | MS.gene42516 | 0.825 | 5.95E-54 | -1.69E-46 |
| MS.gene054413 | MS.gene42516 | 0.811908 | 5.53E-51 | -1.69E-46 |
| MS.gene054892 | MS.gene42516 | 0.875849 | 2.23E-68 | -1.69E-46 |
| MS.gene054893 | MS.gene42516 | 0.88027 | 6.30E-70 | -1.69E-46 |
| MS.gene054957 | MS.gene42516 | 0.838201 | 3.31E-57 | -1.69E-46 |
| MS.gene05615 | MS.gene42516 | 0.811753 | 5.98E-51 | -1.69E-46 |
| MS.gene05624 | MS.gene42516 | 0.821383 | 4.16E-53 | -1.69E-46 |
| MS.gene057001 | MS.gene42516 | 0.801134 | 1.04E-48 | -1.69E-46 |
| MS.gene057093 | MS.gene42516 | 0.809461 | 1.87E-50 | -1.69E-46 |
| MS.gene057174 | MS.gene42516 | 0.841995 | 3.39E-58 | -1.69E-46 |
| MS.gene057622 | MS.gene42516 | 0.826994 | 2.00E-54 | -1.69E-46 |
| MS.gene058095 | MS.gene42516 | 0.831526 | 1.59E-55 | -1.69E-46 |
| MS.gene058159 | MS.gene42516 | 0.812187 | 4.81E-51 | -1.69E-46 |
| MS.gene058292 | MS.gene42516 | 0.807905 | 4.02E-50 | -1.69E-46 |
| MS.gene058429 | MS.gene42516 | 0.800949 | 1.13E-48 | -1.69E-46 |
| MS.gene05878 | MS.gene42516 | 0.803399 | 3.55E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene42516 | 0.821542 | 3.82E-53 | -1.69E-46 |
| MS.gene05985 | MS.gene42516 | -0.806384 | 8.45E-50 | -1.69E-46 |
| MS.gene059901 | MS.gene42516 | -0.8005 | 1.40E-48 | -1.69E-46 |
| MS.gene060413 | MS.gene42516 | 0.824285 | 8.77E-54 | -1.69E-46 |
| MS.gene060435 | MS.gene42516 | 0.801037 | 1.09E-48 | -1.69E-46 |
| MS.gene060522 | MS.gene42516 | 0.837758 | 4.30E-57 | -1.69E-46 |
| MS.gene060933 | MS.gene42516 | 0.85171 | 7.43E-61 | -1.69E-46 |
| MS.gene060935 | MS.gene42516 | 0.800123 | 1.67E-48 | -1.69E-46 |
| MS.gene060937 | MS.gene42516 | 0.825374 | 4.85E-54 | -1.69E-46 |
| MS.gene060964 | MS.gene42516 | 0.820475 | 6.72E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene42516 | 0.811544 | 6.64E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42516.t1 | MTR_7g091650 | 98.551 | 414 | 6 | 0 | 1 | 414 | 1 | 414 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42516.t1 | AT2G19560 | 76.087 | 414 | 98 | 1 | 1 | 414 | 1 | 413 | 0.0 | 642 |
| MS.gene42516.t1 | AT2G19560 | 80.573 | 314 | 60 | 1 | 101 | 414 | 2 | 314 | 0.0 | 522 |
Find 76 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATTCAAGATTTACTTTA+AGG | 0.080216 | 7.1:+15909922 | MS.gene42516:CDS |
| ACGTTGTTGCTTATGAAATT+AGG | 0.153786 | 7.1:+15908731 | MS.gene42516:CDS |
| CGTTGTTGCTTATGAAATTA+GGG | 0.224210 | 7.1:+15908732 | MS.gene42516:CDS |
| GACCCTTTCCCCAAGTTAAA+TGG | 0.224511 | 7.1:+15912781 | MS.gene42516:CDS |
| GTTATAGGCTTCAACGAAAT+TGG | 0.231468 | 7.1:-15908541 | None:intergenic |
| ATATTGTACAAGCTCTAAAA+AGG | 0.257192 | 7.1:+15912135 | MS.gene42516:CDS |
| TTGTTCAGGAATTTCGTAAT+TGG | 0.261819 | 7.1:+15908680 | MS.gene42516:CDS |
| TTGATTGTATTCCAGGTAAA+AGG | 0.270860 | 7.1:+15909863 | MS.gene42516:intron |
| ATTCTAACCTTGTCTCTATT+AGG | 0.271778 | 7.1:-15910198 | None:intergenic |
| ACCAGAATTAAACCTTATAT+TGG | 0.293079 | 7.1:-15910735 | None:intergenic |
| AACAGCATGAAGCCAATATA+AGG | 0.349869 | 7.1:+15910723 | MS.gene42516:CDS |
| AAATTCCTCAAAATCAAATA+TGG | 0.357145 | 7.1:-15910175 | None:intergenic |
| ATTTGAGAGAGATGCCGTTT+TGG | 0.366232 | 7.1:-15908356 | None:intergenic |
| GGAGAAACGGTTGAGGTATT+CGG | 0.366603 | 7.1:-15908319 | None:intergenic |
| TTCACCTGGTGAGCTCTGCT+TGG | 0.378378 | 7.1:-15912492 | None:intergenic |
| TGTTCAGGAATTTCGTAATT+GGG | 0.401599 | 7.1:+15908681 | MS.gene42516:CDS |
| AATTAGGGTTCTTGCTGAAA+AGG | 0.406313 | 7.1:+15908747 | MS.gene42516:CDS |
| AAGATTCTTGTGTATCAGTA+TGG | 0.406611 | 7.1:-15912707 | None:intergenic |
| CAGAGCTCACCAGGTGAAGT+TGG | 0.407918 | 7.1:+15912497 | MS.gene42516:CDS |
| TTCCATTTAACTTGGGGAAA+GGG | 0.416354 | 7.1:-15912783 | None:intergenic |
| AGAGAGAAGGAAGTGGGAGT+TGG | 0.416612 | 7.1:-15908397 | None:intergenic |
| ATTCCAGTGAAGCTTTCAAT+AGG | 0.418462 | 7.1:+15911223 | MS.gene42516:CDS |
| CTTCTCCAAGAGCCTGTGAT+TGG | 0.422456 | 7.1:-15911254 | None:intergenic |
| ACATCTTCTTTACTAATCTC+TGG | 0.429870 | 7.1:-15912346 | None:intergenic |
| GACAGACAATTGGCAGCAAA+TGG | 0.434588 | 7.1:+15909066 | MS.gene42516:CDS |
| TCACCTGGTGAGCTCTGCTT+GGG | 0.437488 | 7.1:-15912491 | None:intergenic |
| GGAAAACCTGTCAATTCATA+AGG | 0.438899 | 7.1:+15912802 | MS.gene42516:CDS |
| CTGTTGGTTGCAATGCTTCA+AGG | 0.445629 | 7.1:-15910705 | None:intergenic |
| CCAGCACCTTTCAACTTCTC+AGG | 0.448793 | 7.1:-15909096 | None:intergenic |
| AGACCCAAGCAGAGCTCACC+AGG | 0.451286 | 7.1:+15912488 | MS.gene42516:CDS |
| ATGCCTATTGAAAGCTTCAC+TGG | 0.454323 | 7.1:-15911226 | None:intergenic |
| TTCTCCAAGAGCCTGTGATT+GGG | 0.457016 | 7.1:-15911253 | None:intergenic |
| GTCACTTACATGTACTATAC+TGG | 0.463654 | 7.1:+15910319 | MS.gene42516:CDS |
| TCCAGTCCTTATGAATTGAC+AGG | 0.466979 | 7.1:-15912808 | None:intergenic |
| GGGGCGATCCTCAACTTCTT+CGG | 0.477985 | 7.1:+15912156 | MS.gene42516:CDS |
| TTATTGTTAAAGCATTGAAA+TGG | 0.486233 | 7.1:+15912523 | MS.gene42516:CDS |
| CTTGAAGTTCTACCTTCTCT+AGG | 0.487820 | 7.1:-15912319 | None:intergenic |
| CCTGAGAAGTTGAAAGGTGC+TGG | 0.489843 | 7.1:+15909096 | MS.gene42516:CDS |
| TTATATTGGCTTCATGCTGT+TGG | 0.491818 | 7.1:-15910721 | None:intergenic |
| TGTTGAAGTGATCGGAAAAG+AGG | 0.496197 | 7.1:-15908507 | None:intergenic |
| ATTGCCCAATCACAGGCTCT+TGG | 0.498484 | 7.1:+15911249 | MS.gene42516:CDS |
| TTTGCAGGTAGAGTGTATAA+TGG | 0.498834 | 7.1:+15912684 | MS.gene42516:intron |
| TTCTTATTATACTGCGGCAA+AGG | 0.505154 | 7.1:-15910134 | None:intergenic |
| TTTCCATTTAACTTGGGGAA+AGG | 0.515780 | 7.1:-15912784 | None:intergenic |
| GTTGCAATGCTTCAAGGCAT+AGG | 0.517547 | 7.1:-15910699 | None:intergenic |
| GTTTATAGTGTTGAAGTGAT+CGG | 0.519681 | 7.1:-15908515 | None:intergenic |
| CAATAACCTCCAACTTCACC+TGG | 0.530433 | 7.1:-15912506 | None:intergenic |
| AACAATGGCGTATTTGAGCA+TGG | 0.533509 | 7.1:+15908275 | None:intergenic |
| ATGAAACGGCGTCGGAGAAA+CGG | 0.534306 | 7.1:-15908332 | None:intergenic |
| CGGCGAGAGAGAGAAGGAAG+TGG | 0.544385 | 7.1:-15908404 | None:intergenic |
| CACTTCAATATCACGAGGAC+TGG | 0.548396 | 7.1:+15912183 | MS.gene42516:CDS |
| AATTGACATGGATGTGGATG+AGG | 0.555159 | 7.1:+15912551 | MS.gene42516:CDS |
| TAGGCATATTGCCCAATCAC+AGG | 0.563533 | 7.1:+15911242 | MS.gene42516:CDS |
| GCTTGAAATTGACATGGATG+TGG | 0.568571 | 7.1:+15912545 | MS.gene42516:CDS |
| GTAAAAGGTGCTAAGCGTGT+TGG | 0.576657 | 7.1:+15909878 | MS.gene42516:CDS |
| GGCGAGAGAGAGAAGGAAGT+GGG | 0.582230 | 7.1:-15908403 | None:intergenic |
| CAATACTTCTTATTATACTG+CGG | 0.586087 | 7.1:-15910140 | None:intergenic |
| AGCTCACCAGGTGAAGTTGG+AGG | 0.588477 | 7.1:+15912500 | MS.gene42516:CDS |
| ACAATGGCGTATTTGAGCAT+GGG | 0.590947 | 7.1:+15908276 | None:intergenic |
| AAATCTCCTGAGAAGTTGAA+AGG | 0.593067 | 7.1:+15909090 | MS.gene42516:CDS |
| CGGCGTCGGAGAAACGGTTG+AGG | 0.594594 | 7.1:-15908326 | None:intergenic |
| AGTGCAGACCGAAGAAGTTG+AGG | 0.599498 | 7.1:-15912164 | None:intergenic |
| CTTTGCCCACAAAAGCAAAG+TGG | 0.605507 | 7.1:+15912741 | MS.gene42516:CDS |
| GAGCGTCGGCGAGAGAGAGA+AGG | 0.610417 | 7.1:-15908410 | None:intergenic |
| TGTATATCTTGTCCTAGAGA+AGG | 0.611998 | 7.1:+15912307 | MS.gene42516:CDS |
| ATACACAAGAATCTTGTGAA+AGG | 0.613044 | 7.1:+15912715 | MS.gene42516:CDS |
| GTCGATTGAAGTCGTTGACG+AGG | 0.613533 | 7.1:-15908437 | None:intergenic |
| GACGCCGTTTCATACCAAAA+CGG | 0.616324 | 7.1:+15908342 | MS.gene42516:CDS |
| TCGTAATTGGGAATCCGCGT+GGG | 0.619302 | 7.1:+15908693 | MS.gene42516:CDS |
| TTCGTAATTGGGAATCCGCG+TGG | 0.623906 | 7.1:+15908692 | MS.gene42516:CDS |
| GGAGAAGTACAATCTACTTG+AGG | 0.637346 | 7.1:+15911270 | MS.gene42516:CDS |
| TACAGCTTCAAGAGCCCACG+CGG | 0.650017 | 7.1:-15908707 | None:intergenic |
| GGAATTTCCTAATAGAGACA+AGG | 0.655538 | 7.1:+15910191 | MS.gene42516:CDS |
| GTTGACGAGGATGAGAGCGT+CGG | 0.661085 | 7.1:-15908424 | None:intergenic |
| GAAATGGCTTGAAATTGACA+TGG | 0.673583 | 7.1:+15912539 | MS.gene42516:CDS |
| GTCTGCACTTCAATATCACG+AGG | 0.692123 | 7.1:+15912178 | MS.gene42516:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTAAAATTTTAAACAAA+AGG | - | chr7.1:15911594-15911613 | None:intergenic | 10.0% |
| !!! | TAAGTAATTATTTTTTCTTT+TGG | + | chr7.1:15912101-15912120 | MS.gene42516:intron | 10.0% |
| !!! | TTGTAAAATTTTAAACAAAA+GGG | - | chr7.1:15911593-15911612 | None:intergenic | 10.0% |
| !! | ATCTTTCAAAAAACAAATAA+AGG | + | chr7.1:15912623-15912642 | MS.gene42516:intron | 15.0% |
| !! | TATCATAAAGATAAATCATA+TGG | - | chr7.1:15910291-15910310 | None:intergenic | 15.0% |
| !! | TCTTAGCAAATTAAAAAAAA+GGG | - | chr7.1:15911900-15911919 | None:intergenic | 15.0% |
| !! | TTCTTAGCAAATTAAAAAAA+AGG | - | chr7.1:15911901-15911920 | None:intergenic | 15.0% |
| !!! | ATTTATACATTTATTTCTTC+TGG | - | chr7.1:15911492-15911511 | None:intergenic | 15.0% |
| !!! | TGTAAAATTTTAAACAAAAG+GGG | - | chr7.1:15911592-15911611 | None:intergenic | 15.0% |
| !! | AAATATTATATCACAAAGAG+TGG | - | chr7.1:15911619-15911638 | None:intergenic | 20.0% |
| !! | AAATTCCTCAAAATCAAATA+TGG | - | chr7.1:15910178-15910197 | None:intergenic | 20.0% |
| !! | AAATTTAGATTACTTACAGA+AGG | - | chr7.1:15910373-15910392 | None:intergenic | 20.0% |
| !! | ACAAATGTAAACTCTATAAA+TGG | - | chr7.1:15910653-15910672 | None:intergenic | 20.0% |
| !! | GATATAAACAAATTGAAAGT+AGG | - | chr7.1:15912606-15912625 | None:intergenic | 20.0% |
| !! | GTTATTCAAGATTTACTTTA+AGG | + | chr7.1:15909922-15909941 | MS.gene42516:CDS | 20.0% |
| !! | TTATCTTTATGATATGTTTC+AGG | + | chr7.1:15910297-15910316 | MS.gene42516:intron | 20.0% |
| !!! | AAATCATTGACTGAAAATTT+GGG | - | chr7.1:15909615-15909634 | None:intergenic | 20.0% |
| !!! | AAATGGAAGTATTTATTAGT+AGG | + | chr7.1:15910962-15910981 | MS.gene42516:intron | 20.0% |
| !!! | AGGTTTTGTTAAACTTTAAA+AGG | - | chr7.1:15911756-15911775 | None:intergenic | 20.0% |
| !!! | ATTGATTCTAATTTGAAACT+AGG | + | chr7.1:15908810-15908829 | MS.gene42516:intron | 20.0% |
| !!! | GTATTTTTTCTTTTTTGAGA+GGG | + | chr7.1:15910475-15910494 | MS.gene42516:intron | 20.0% |
| !!! | TAACAAAACCTTTTTTATTG+TGG | + | chr7.1:15911765-15911784 | MS.gene42516:intron | 20.0% |
| !!! | TATTTTTTCTTTTTTGAGAG+GGG | + | chr7.1:15910476-15910495 | MS.gene42516:intron | 20.0% |
| !!! | TCGTTTTCTTTTTTCATTTT+CGG | + | chr7.1:15909034-15909053 | MS.gene42516:intron | 20.0% |
| !!! | TGTATTTTTTCTTTTTTGAG+AGG | + | chr7.1:15910474-15910493 | MS.gene42516:intron | 20.0% |
| !!! | TTATTGTTAAAGCATTGAAA+TGG | + | chr7.1:15912523-15912542 | MS.gene42516:CDS | 20.0% |
| !!! | TTTTAATTTGCTAAGAAGTT+TGG | + | chr7.1:15911904-15911923 | MS.gene42516:intron | 20.0% |
| !!! | TTTTATTGAAATTGAAGTCA+TGG | + | chr7.1:15908627-15908646 | MS.gene42516:intron | 20.0% |
| ! | ACCAGAATTAAACCTTATAT+TGG | - | chr7.1:15910738-15910757 | None:intergenic | 25.0% |
| ! | ATTAGCAGTATAAACAGAAA+CGG | - | chr7.1:15911982-15912001 | None:intergenic | 25.0% |
| ! | ATTCACACTCAAATAAAAGA+AGG | - | chr7.1:15909013-15909032 | None:intergenic | 25.0% |
| ! | CAATACTTCTTATTATACTG+CGG | - | chr7.1:15910143-15910162 | None:intergenic | 25.0% |
| ! | CTTGGGTTTCAAATTAAAAT+AGG | - | chr7.1:15909177-15909196 | None:intergenic | 25.0% |
| ! | TAGCAAATTAAAAAAAAGGG+AGG | - | chr7.1:15911897-15911916 | None:intergenic | 25.0% |
| ! | TGCAAATAATTTAAACCAGA+AGG | - | chr7.1:15910517-15910536 | None:intergenic | 25.0% |
| ! | TTAATATTTGATGCATTTGC+AGG | + | chr7.1:15912669-15912688 | MS.gene42516:intron | 25.0% |
| ! | TTACTGATGAGATAAACAAT+TGG | - | chr7.1:15911110-15911129 | None:intergenic | 25.0% |
| ! | TTTGAAAAAGAGACCTAATT+GGG | - | chr7.1:15909302-15909321 | None:intergenic | 25.0% |
| !! | AATTGGTAACATAAACATGA+TGG | - | chr7.1:15911679-15911698 | None:intergenic | 25.0% |
| !! | CAAATCATTGACTGAAAATT+TGG | - | chr7.1:15909616-15909635 | None:intergenic | 25.0% |
| !! | CAAATTTTCAGTCAATGATT+TGG | + | chr7.1:15909614-15909633 | MS.gene42516:intron | 25.0% |
| !! | TCTTTACTCATGAAAGTTTT+TGG | + | chr7.1:15909120-15909139 | MS.gene42516:CDS | 25.0% |
| !! | TTGGATTTTGCAGTTTATAT+GGG | - | chr7.1:15911015-15911034 | None:intergenic | 25.0% |
| !! | TTTGGATTTTGCAGTTTATA+TGG | - | chr7.1:15911016-15911035 | None:intergenic | 25.0% |
| !! | TTTTCTATAATGTTACCTTC+TGG | + | chr7.1:15910499-15910518 | MS.gene42516:intron | 25.0% |
| !!! | ATATTGTACAAGCTCTAAAA+AGG | + | chr7.1:15912135-15912154 | MS.gene42516:CDS | 25.0% |
| !!! | ATTTTAATTTGAAACCCAAG+TGG | + | chr7.1:15909177-15909196 | MS.gene42516:intron | 25.0% |
| !!! | ATTTTTTCTTTTGGACAGTA+CGG | + | chr7.1:15912110-15912129 | MS.gene42516:intron | 25.0% |
| !!! | CTTAGTTTACTTTTATGACT+AGG | + | chr7.1:15911440-15911459 | MS.gene42516:intron | 25.0% |
| !!! | CTTTTTTCATTTTCGGTTTT+AGG | + | chr7.1:15909041-15909060 | MS.gene42516:intron | 25.0% |
| !!! | TAGGAATGTTTTTTACTAGT+GGG | + | chr7.1:15910981-15911000 | MS.gene42516:intron | 25.0% |
| !!! | TATTGTACAAGCTCTAAAAA+GGG | + | chr7.1:15912136-15912155 | MS.gene42516:CDS | 25.0% |
| !!! | TTTTGAAAAAGAGACCTAAT+TGG | - | chr7.1:15909303-15909322 | None:intergenic | 25.0% |
| !!! | TTTTTCAAAAATCAAGCACT+TGG | + | chr7.1:15911941-15911960 | MS.gene42516:intron | 25.0% |
| AAAGAATGAATCATACTTGG+TGG | - | chr7.1:15908580-15908599 | None:intergenic | 30.0% | |
| AAGAAGTTTGGCTATTCAAA+GGG | + | chr7.1:15911916-15911935 | MS.gene42516:intron | 30.0% | |
| AAGATTCTTGTGTATCAGTA+TGG | - | chr7.1:15912710-15912729 | None:intergenic | 30.0% | |
| AATTAAAAAAAAGGGAGGAC+CGG | - | chr7.1:15911892-15911911 | None:intergenic | 30.0% | |
| ACAGTAAAGTTGTTGTCATT+AGG | + | chr7.1:15911800-15911819 | MS.gene42516:intron | 30.0% | |
| ACATCTTCTTTACTAATCTC+TGG | - | chr7.1:15912349-15912368 | None:intergenic | 30.0% | |
| ACGAAAGAATGAATCATACT+TGG | - | chr7.1:15908583-15908602 | None:intergenic | 30.0% | |
| AGTATGTTATGTTAGTAGCA+AGG | - | chr7.1:15909245-15909264 | None:intergenic | 30.0% | |
| ATACACAAGAATCTTGTGAA+AGG | + | chr7.1:15912715-15912734 | MS.gene42516:CDS | 30.0% | |
| ATCAACAACCAAATGTAATC+AGG | - | chr7.1:15912031-15912050 | None:intergenic | 30.0% | |
| ATCCTATGTCAAACAAAAAC+TGG | - | chr7.1:15911187-15911206 | None:intergenic | 30.0% | |
| ATCTCATTGTTCATCTATGA+AGG | + | chr7.1:15911078-15911097 | MS.gene42516:intron | 30.0% | |
| ATGCATGAATAGGCTAAAAT+TGG | - | chr7.1:15909640-15909659 | None:intergenic | 30.0% | |
| ATTCTAACCTTGTCTCTATT+AGG | - | chr7.1:15910201-15910220 | None:intergenic | 30.0% | |
| ATTGAAAGTAGGAAAGAATG+AGG | - | chr7.1:15912595-15912614 | None:intergenic | 30.0% | |
| CAAAATAATCTGAACCAAAC+AGG | - | chr7.1:15908782-15908801 | None:intergenic | 30.0% | |
| CATAACAACCTGATTACATT+TGG | + | chr7.1:15912020-15912039 | MS.gene42516:intron | 30.0% | |
| CTAGTTAATTGAGCGTTAAT+TGG | - | chr7.1:15911696-15911715 | None:intergenic | 30.0% | |
| GCCAATATAAGGTTTAATTC+TGG | + | chr7.1:15910734-15910753 | MS.gene42516:intron | 30.0% | |
| TAAGAAGTTTGGCTATTCAA+AGG | + | chr7.1:15911915-15911934 | MS.gene42516:intron | 30.0% | |
| TACTTCCATGATTCATTAAG+TGG | + | chr7.1:15909792-15909811 | MS.gene42516:intron | 30.0% | |
| TCCTCATAATGAAACAACAA+CGG | - | chr7.1:15912218-15912237 | None:intergenic | 30.0% | |
| TCTCATTGTTCATCTATGAA+GGG | + | chr7.1:15911079-15911098 | MS.gene42516:intron | 30.0% | |
| TGCTTAGTGAATATTCTCTT+TGG | + | chr7.1:15910929-15910948 | MS.gene42516:intron | 30.0% | |
| TGTTCAGGAATTTCGTAATT+GGG | + | chr7.1:15908681-15908700 | MS.gene42516:CDS | 30.0% | |
| TTATAGCTTGATTGTATTCC+AGG | + | chr7.1:15909856-15909875 | MS.gene42516:intron | 30.0% | |
| TTGATTGTATTCCAGGTAAA+AGG | + | chr7.1:15909863-15909882 | MS.gene42516:intron | 30.0% | |
| TTGTTCAGGAATTTCGTAAT+TGG | + | chr7.1:15908680-15908699 | MS.gene42516:CDS | 30.0% | |
| ! | AACAAAGTTGATTCCCAATT+AGG | + | chr7.1:15909286-15909305 | MS.gene42516:intron | 30.0% |
| ! | ACGTTGTTGCTTATGAAATT+AGG | + | chr7.1:15908731-15908750 | MS.gene42516:CDS | 30.0% |
| ! | ATACAGTTTTCGTTTGAAAG+TGG | - | chr7.1:15910547-15910566 | None:intergenic | 30.0% |
| ! | CGTTGTTGCTTATGAAATTA+GGG | + | chr7.1:15908732-15908751 | MS.gene42516:CDS | 30.0% |
| ! | GTTTATAGTGTTGAAGTGAT+CGG | - | chr7.1:15908518-15908537 | None:intergenic | 30.0% |
| ! | TCTTCTGCATACTTTTGTTA+AGG | + | chr7.1:15909701-15909720 | MS.gene42516:intron | 30.0% |
| ! | TGGATTTTGCAGTTTATATG+GGG | - | chr7.1:15911014-15911033 | None:intergenic | 30.0% |
| ! | TGGGAATCAACTTTGTTTAA+AGG | - | chr7.1:15909283-15909302 | None:intergenic | 30.0% |
| ! | TTATTTTCCACTCTCTCTAT+GGG | + | chr7.1:15911319-15911338 | MS.gene42516:intron | 30.0% |
| !! | AACCAGTTTTTGTTTGACAT+AGG | + | chr7.1:15911182-15911201 | MS.gene42516:intron | 30.0% |
| !! | ACAGGTTTTCCATTTAACTT+GGG | - | chr7.1:15912793-15912812 | None:intergenic | 30.0% |
| !! | AGTCATGGATTTTAATGTTG+TGG | + | chr7.1:15908642-15908661 | MS.gene42516:intron | 30.0% |
| !! | ATTGTACAAGCTCTAAAAAG+GGG | + | chr7.1:15912137-15912156 | MS.gene42516:CDS | 30.0% |
| !! | GACAACCATATTTGATTTTG+AGG | + | chr7.1:15910170-15910189 | MS.gene42516:CDS | 30.0% |
| !!! | GTAGGAATGTTTTTTACTAG+TGG | + | chr7.1:15910980-15910999 | MS.gene42516:intron | 30.0% |
| AAACTAAGTTACTGCTCAGA+CGG | - | chr7.1:15911428-15911447 | None:intergenic | 35.0% | |
| AAATCTCCTGAGAAGTTGAA+AGG | + | chr7.1:15909090-15909109 | MS.gene42516:CDS | 35.0% | |
| AACAGCATGAAGCCAATATA+AGG | + | chr7.1:15910723-15910742 | MS.gene42516:CDS | 35.0% | |
| AATTAGGGTTCTTGCTGAAA+AGG | + | chr7.1:15908747-15908766 | MS.gene42516:CDS | 35.0% | |
| ACAATCTACTTGAGGTATGT+TGG | + | chr7.1:15911278-15911297 | MS.gene42516:intron | 35.0% | |
| ACAGCTAATACACATCGAAA+AGG | - | chr7.1:15912402-15912421 | None:intergenic | 35.0% | |
| ACAGTGGTACGAAACTAAAT+TGG | - | chr7.1:15909330-15909349 | None:intergenic | 35.0% | |
| ACTTTAACAACAAGCTCAAC+AGG | - | chr7.1:15909577-15909596 | None:intergenic | 35.0% | |
| AGCAAAGCAACTAAACTTGT+CGG | - | chr7.1:15908905-15908924 | None:intergenic | 35.0% | |
| ATTAAACGTGCATTTGTGGA+TGG | + | chr7.1:15910827-15910846 | MS.gene42516:intron | 35.0% | |
| ATTCATGCATGTACTACTTG+TGG | + | chr7.1:15909650-15909669 | MS.gene42516:intron | 35.0% | |
| ATTCCAGTGAAGCTTTCAAT+AGG | + | chr7.1:15911223-15911242 | MS.gene42516:CDS | 35.0% | |
| CAAGTAGTACATGCATGAAT+AGG | - | chr7.1:15909650-15909669 | None:intergenic | 35.0% | |
| CAATCTACTTGAGGTATGTT+GGG | + | chr7.1:15911279-15911298 | MS.gene42516:intron | 35.0% | |
| CACAAAACAACACAAAGCTA+TGG | - | chr7.1:15909765-15909784 | None:intergenic | 35.0% | |
| CACATCCACTTAATGAATCA+TGG | - | chr7.1:15909800-15909819 | None:intergenic | 35.0% | |
| CAGAAGGACAGAGTTAAATA+TGG | - | chr7.1:15911149-15911168 | None:intergenic | 35.0% | |
| CCTCATAATGAAACAACAAC+GGG | - | chr7.1:15912217-15912236 | None:intergenic | 35.0% | |
| CGAAACATACAATACACGTT+TGG | - | chr7.1:15908853-15908872 | None:intergenic | 35.0% | |
| CTAATACACATCGAAAAGGA+GGG | - | chr7.1:15912398-15912417 | None:intergenic | 35.0% | |
| GAAAATGTTTACATACCGCA+AGG | - | chr7.1:15909149-15909168 | None:intergenic | 35.0% | |
| GAAATGGCTTGAAATTGACA+TGG | + | chr7.1:15912539-15912558 | MS.gene42516:CDS | 35.0% | |
| GCAAATTAAACGTGCATTTG+TGG | + | chr7.1:15910823-15910842 | MS.gene42516:intron | 35.0% | |
| GGAATTTCCTAATAGAGACA+AGG | + | chr7.1:15910191-15910210 | MS.gene42516:CDS | 35.0% | |
| GTCACTTACATGTACTATAC+TGG | + | chr7.1:15910319-15910338 | MS.gene42516:CDS | 35.0% | |
| GTGTGAAATTTCACTTTCAG+AGG | + | chr7.1:15909817-15909836 | MS.gene42516:intron | 35.0% | |
| GTTATAGGCTTCAACGAAAT+TGG | - | chr7.1:15908544-15908563 | None:intergenic | 35.0% | |
| GTTTACATTTGTGACTTGAC+AGG | + | chr7.1:15910661-15910680 | MS.gene42516:intron | 35.0% | |
| TAATACACATCGAAAAGGAG+GGG | - | chr7.1:15912397-15912416 | None:intergenic | 35.0% | |
| TACTTATAGAGACATTTCCG+AGG | - | chr7.1:15912087-15912106 | None:intergenic | 35.0% | |
| TGGACATTATCAGTAATGAG+AGG | - | chr7.1:15911659-15911678 | None:intergenic | 35.0% | |
| TGTATATCTTGTCCTAGAGA+AGG | + | chr7.1:15912307-15912326 | MS.gene42516:CDS | 35.0% | |
| TTAAACGTGCATTTGTGGAT+GGG | + | chr7.1:15910828-15910847 | MS.gene42516:intron | 35.0% | |
| TTCTTATTATACTGCGGCAA+AGG | - | chr7.1:15910137-15910156 | None:intergenic | 35.0% | |
| TTTACTAGGGAAGGAAGATT+TGG | - | chr7.1:15911034-15911053 | None:intergenic | 35.0% | |
| TTTGCAGGTAGAGTGTATAA+TGG | + | chr7.1:15912684-15912703 | MS.gene42516:intron | 35.0% | |
| ! | AATGGATTCTACTTGAAGCT+AGG | + | chr7.1:15908936-15908955 | MS.gene42516:intron | 35.0% |
| ! | AATTTAAACCCCTCTAGAAG+TGG | - | chr7.1:15908878-15908897 | None:intergenic | 35.0% |
| ! | AATTTTCAGTGCGTTTGTTC+AGG | + | chr7.1:15908666-15908685 | MS.gene42516:intron | 35.0% |
| ! | AGCTGCAAAACATTTGTTGA+TGG | - | chr7.1:15910102-15910121 | None:intergenic | 35.0% |
| ! | ATTTTAAACAAAAGGGGCGA+AGG | - | chr7.1:15911586-15911605 | None:intergenic | 35.0% |
| ! | CATGAAGTGAGCTTTCTTTT+AGG | + | chr7.1:15910783-15910802 | MS.gene42516:intron | 35.0% |
| ! | GACAGGTTTTCCATTTAACT+TGG | - | chr7.1:15912794-15912813 | None:intergenic | 35.0% |
| ! | GGATTTTGCAGTTTATATGG+GGG | - | chr7.1:15911013-15911032 | None:intergenic | 35.0% |
| ! | TATTTTCCACTCTCTCTATG+GGG | + | chr7.1:15911320-15911339 | MS.gene42516:intron | 35.0% |
| ! | TCAACAAATGTTTTGCAGCT+TGG | + | chr7.1:15910102-15910121 | MS.gene42516:intron | 35.0% |
| ! | TCTCATTTGTTGACATATGC+TGG | + | chr7.1:15909995-15910014 | MS.gene42516:intron | 35.0% |
| ! | TTTTAAACAAAAGGGGCGAA+GGG | - | chr7.1:15911585-15911604 | None:intergenic | 35.0% |
| ! | TTTTCCAAGTGCCAATTTGT+AGG | + | chr7.1:15911528-15911547 | MS.gene42516:intron | 35.0% |
| ! | TTTTCCCATAAGTGTCTGAT+GGG | + | chr7.1:15911554-15911573 | MS.gene42516:intron | 35.0% |
| ! | TTTTGTAGGTTCTTGAGATC+AGG | + | chr7.1:15912284-15912303 | MS.gene42516:intron | 35.0% |
| !! | AACTACTTTTGCCATATCTC+AGG | - | chr7.1:15909525-15909544 | None:intergenic | 35.0% |
| !! | CAAATGCACGTTTAATTTGC+AGG | - | chr7.1:15910823-15910842 | None:intergenic | 35.0% |
| !! | CTTTGCTTTTGTCTCTAGAA+TGG | + | chr7.1:15908918-15908937 | MS.gene42516:intron | 35.0% |
| !! | GTTATTTTCCACTCTCTCTA+TGG | + | chr7.1:15911318-15911337 | MS.gene42516:intron | 35.0% |
| !! | TACCACTGTTGATTGGTTTA+GGG | + | chr7.1:15909341-15909360 | MS.gene42516:intron | 35.0% |
| !! | TCTTTGGTGCTAAGCAAAAA+TGG | + | chr7.1:15910945-15910964 | MS.gene42516:intron | 35.0% |
| !! | TTATATTGGCTTCATGCTGT+TGG | - | chr7.1:15910724-15910743 | None:intergenic | 35.0% |
| !! | TTCCATTTAACTTGGGGAAA+GGG | - | chr7.1:15912786-15912805 | None:intergenic | 35.0% |
| !! | TTTCCATTTAACTTGGGGAA+AGG | - | chr7.1:15912787-15912806 | None:intergenic | 35.0% |
| !!! | CAGGTTTTCCATTTAACTTG+GGG | - | chr7.1:15912792-15912811 | None:intergenic | 35.0% |
| !!! | GGTTTTTTCGAAAGCGTTAT+AGG | - | chr7.1:15908559-15908578 | None:intergenic | 35.0% |
| !!! | GTAAACCTTTTAGAGCTTGT+AGG | + | chr7.1:15911383-15911402 | MS.gene42516:intron | 35.0% |
| AATACACATCGAAAAGGAGG+GGG | - | chr7.1:15912396-15912415 | None:intergenic | 40.0% | |
| AATCAAGCACTTGGAGTTTG+AGG | + | chr7.1:15911950-15911969 | MS.gene42516:intron | 40.0% | |
| AATTACAACCATGTGTGCCT+CGG | + | chr7.1:15912067-15912086 | MS.gene42516:intron | 40.0% | |
| AATTGACATGGATGTGGATG+AGG | + | chr7.1:15912551-15912570 | MS.gene42516:CDS | 40.0% | |
| AGACGGAAACATAACTGAGT+TGG | - | chr7.1:15911411-15911430 | None:intergenic | 40.0% | |
| AGTTTCGTACCACTGTTGAT+TGG | + | chr7.1:15909334-15909353 | MS.gene42516:intron | 40.0% | |
| ATCAAGCACTTGGAGTTTGA+GGG | + | chr7.1:15911951-15911970 | MS.gene42516:intron | 40.0% | |
| ATCTGAACTTGTAGCATCTC+AGG | + | chr7.1:15910023-15910042 | MS.gene42516:intron | 40.0% | |
| ATCTTCCTTCCCTAGTAAAG+AGG | + | chr7.1:15911035-15911054 | MS.gene42516:intron | 40.0% | |
| ATGCCTATTGAAAGCTTCAC+TGG | - | chr7.1:15911229-15911248 | None:intergenic | 40.0% | |
| ATGTTTCGTTCCACTTCTAG+AGG | + | chr7.1:15908865-15908884 | MS.gene42516:intron | 40.0% | |
| CATACAATACACCAGATGGT+TGG | + | chr7.1:15911826-15911845 | MS.gene42516:intron | 40.0% | |
| CATTAGAAACCAATGGCATC+AGG | - | chr7.1:15909405-15909424 | None:intergenic | 40.0% | |
| CCATATTGCTTAGCATTGCT+AGG | + | chr7.1:15909371-15909390 | MS.gene42516:intron | 40.0% | |
| CCTAGCAATGCTAAGCAATA+TGG | - | chr7.1:15909374-15909393 | None:intergenic | 40.0% | |
| CTTGAAGTTCTACCTTCTCT+AGG | - | chr7.1:15912322-15912341 | None:intergenic | 40.0% | |
| GAAAGTAGGAAAGAATGAGG+AGG | - | chr7.1:15912592-15912611 | None:intergenic | 40.0% | |
| GCTAATACACATCGAAAAGG+AGG | - | chr7.1:15912399-15912418 | None:intergenic | 40.0% | |
| GCTTGAAATTGACATGGATG+TGG | + | chr7.1:15912545-15912564 | MS.gene42516:CDS | 40.0% | |
| GTATCCCATCAGACACTTAT+GGG | - | chr7.1:15911561-15911580 | None:intergenic | 40.0% | |
| GTTACAGATCGTCATACAGA+AGG | - | chr7.1:15911165-15911184 | None:intergenic | 40.0% | |
| TAAACGTGCATTTGTGGATG+GGG | + | chr7.1:15910829-15910848 | MS.gene42516:intron | 40.0% | |
| TCAGAACTCAGAACACAATC+AGG | - | chr7.1:15910415-15910434 | None:intergenic | 40.0% | |
| TGTATCCCATCAGACACTTA+TGG | - | chr7.1:15911562-15911581 | None:intergenic | 40.0% | |
| TGTTCCGTTTGCTTTCCTAT+CGG | + | chr7.1:15909948-15909967 | MS.gene42516:intron | 40.0% | |
| TGTTGAAGTGATCGGAAAAG+AGG | - | chr7.1:15908510-15908529 | None:intergenic | 40.0% | |
| TGTTTCGTTCCACTTCTAGA+GGG | + | chr7.1:15908866-15908885 | MS.gene42516:intron | 40.0% | |
| TTAACAACAAGCTCAACAGG+TGG | - | chr7.1:15909574-15909593 | None:intergenic | 40.0% | |
| TTTGCAGTTTATATGGGGGT+TGG | - | chr7.1:15911009-15911028 | None:intergenic | 40.0% | |
| ! | AAAGGTATGTTGTGCCTGTT+TGG | + | chr7.1:15908765-15908784 | MS.gene42516:intron | 40.0% |
| ! | ATTTTCCACTCTCTCTATGG+GGG | + | chr7.1:15911321-15911340 | MS.gene42516:intron | 40.0% |
| ! | CCAAGGCACCACAATAAAAA+AGG | - | chr7.1:15911776-15911795 | None:intergenic | 40.0% |
| ! | GGAGAAGTACAATCTACTTG+AGG | + | chr7.1:15911270-15911289 | MS.gene42516:CDS | 40.0% |
| ! | GTTTTCCCATAAGTGTCTGA+TGG | + | chr7.1:15911553-15911572 | MS.gene42516:intron | 40.0% |
| !! | ATACAGCCACTTTGCTTTTG+TGG | - | chr7.1:15912750-15912769 | None:intergenic | 40.0% |
| !! | ATTTGAGAGAGATGCCGTTT+TGG | - | chr7.1:15908359-15908378 | None:intergenic | 40.0% |
| !! | CCCGTTGTTGTTTCATTATG+AGG | + | chr7.1:15912214-15912233 | MS.gene42516:intron | 40.0% |
| !! | GTACCACTGTTGATTGGTTT+AGG | + | chr7.1:15909340-15909359 | MS.gene42516:intron | 40.0% |
| !! | GTTTTAGGCTGACAGACAAT+TGG | + | chr7.1:15909056-15909075 | MS.gene42516:intron | 40.0% |
| !! | TACAGCCACTTTGCTTTTGT+GGG | - | chr7.1:15912749-15912768 | None:intergenic | 40.0% |
| !!! | ATGCTCTCTAGAGCAACTTT+TGG | - | chr7.1:15912249-15912268 | None:intergenic | 40.0% |
| !!! | CCTTTTTTATTGTGGTGCCT+TGG | + | chr7.1:15911773-15911792 | MS.gene42516:intron | 40.0% |
| !!! | GAAAGTTTTTGGCATCCTTG+CGG | + | chr7.1:15909131-15909150 | MS.gene42516:CDS | 40.0% |
| !!! | GATGCCGTTTTGGTATGAAA+CGG | - | chr7.1:15908349-15908368 | None:intergenic | 40.0% |
| ACAACTTTACTGTTGCGCCA+AGG | - | chr7.1:15911793-15911812 | None:intergenic | 45.0% | |
| ACTTTCTGTATGCTTCCTGC+TGG | + | chr7.1:15910436-15910455 | MS.gene42516:intron | 45.0% | |
| ATACACATCGAAAAGGAGGG+GGG | - | chr7.1:15912395-15912414 | None:intergenic | 45.0% | |
| ATTCCCAAACCCTGTGTATG+CGG | + | chr7.1:15911853-15911872 | MS.gene42516:intron | 45.0% | |
| CAATAACCTCCAACTTCACC+TGG | - | chr7.1:15912509-15912528 | None:intergenic | 45.0% | |
| CACTTCAATATCACGAGGAC+TGG | + | chr7.1:15912183-15912202 | MS.gene42516:CDS | 45.0% | |
| CATACACAGGGTTTGGGAAT+GGG | - | chr7.1:15911853-15911872 | None:intergenic | 45.0% | |
| CTTCCCTAGTAAAGAGGACT+GGG | + | chr7.1:15911041-15911060 | MS.gene42516:intron | 45.0% | |
| CTTTGCCCACAAAAGCAAAG+TGG | + | chr7.1:15912741-15912760 | MS.gene42516:CDS | 45.0% | |
| GACAGACAATTGGCAGCAAA+TGG | + | chr7.1:15909066-15909085 | MS.gene42516:CDS | 45.0% | |
| GACCCTAAACCAATCAACAG+TGG | - | chr7.1:15909346-15909365 | None:intergenic | 45.0% | |
| GACCCTTTCCCCAAGTTAAA+TGG | + | chr7.1:15912781-15912800 | MS.gene42516:CDS | 45.0% | |
| GACGCCGTTTCATACCAAAA+CGG | + | chr7.1:15908342-15908361 | MS.gene42516:CDS | 45.0% | |
| GCTGCATACAATACACCAGA+TGG | + | chr7.1:15911822-15911841 | MS.gene42516:intron | 45.0% | |
| GTATGTTGGGTGCTTATGGA+TGG | + | chr7.1:15911292-15911311 | MS.gene42516:intron | 45.0% | |
| GTCTGCACTTCAATATCACG+AGG | + | chr7.1:15912178-15912197 | MS.gene42516:CDS | 45.0% | |
| GTGAATAAGCCTGATGCCAT+TGG | + | chr7.1:15909393-15909412 | MS.gene42516:intron | 45.0% | |
| GTTCCCAGTCCTCTTTACTA+GGG | - | chr7.1:15911047-15911066 | None:intergenic | 45.0% | |
| GTTCCGTTTGCTTTCCTATC+GGG | + | chr7.1:15909949-15909968 | MS.gene42516:intron | 45.0% | |
| GTTGCAATGCTTCAAGGCAT+AGG | - | chr7.1:15910702-15910721 | None:intergenic | 45.0% | |
| TAGAAAACTACGAAGCCAGC+AGG | - | chr7.1:15910454-15910473 | None:intergenic | 45.0% | |
| TAGGCATATTGCCCAATCAC+AGG | + | chr7.1:15911242-15911261 | MS.gene42516:CDS | 45.0% | |
| TCCAAGTGCCAATTTGTAGG+CGG | + | chr7.1:15911531-15911550 | MS.gene42516:intron | 45.0% | |
| TGAGGTATGTTGGGTGCTTA+TGG | + | chr7.1:15911288-15911307 | MS.gene42516:intron | 45.0% | |
| TGGGAAAACCGCCTACAAAT+TGG | - | chr7.1:15911542-15911561 | None:intergenic | 45.0% | |
| TGTTCCCAGTCCTCTTTACT+AGG | - | chr7.1:15911048-15911067 | None:intergenic | 45.0% | |
| TTCCGTTTGCTTTCCTATCG+GGG | + | chr7.1:15909950-15909969 | MS.gene42516:intron | 45.0% | |
| TTCTCCAAGAGCCTGTGATT+GGG | - | chr7.1:15911256-15911275 | None:intergenic | 45.0% | |
| ! | AGGGGTGCATTAGAAACCAA+TGG | - | chr7.1:15909412-15909431 | None:intergenic | 45.0% |
| ! | CTGTTGGTTGCAATGCTTCA+AGG | - | chr7.1:15910708-15910727 | None:intergenic | 45.0% |
| ! | GGAGAAACGGTTGAGGTATT+CGG | - | chr7.1:15908322-15908341 | None:intergenic | 45.0% |
| ! | GTTTCGTTCCACTTCTAGAG+GGG | + | chr7.1:15908867-15908886 | MS.gene42516:intron | 45.0% |
| ! | TTTTCCACTCTCTCTATGGG+GGG | + | chr7.1:15911322-15911341 | MS.gene42516:intron | 45.0% |
| !! | GTAAAAGGTGCTAAGCGTGT+TGG | + | chr7.1:15909878-15909897 | MS.gene42516:CDS | 45.0% |
| !! | GTTTTGGTATGAAACGGCGT+CGG | - | chr7.1:15908343-15908362 | None:intergenic | 45.0% |
| !! | TGACTTGTTGAGATCCCAGA+TGG | + | chr7.1:15909498-15909517 | MS.gene42516:intron | 45.0% |
| !! | TGGCACCTACAAGCTCTAAA+AGG | - | chr7.1:15911391-15911410 | None:intergenic | 45.0% |
| !! | AAATAAATGTATAAATAAAA+AGG | + | chr7.1:15911496-15911515 | MS.gene42516:intron | 5.0% |
| !! | AATAAATGTATAAATAAAAA+GGG | + | chr7.1:15911497-15911516 | MS.gene42516:intron | 5.0% |
| ACAAAAGCTCCCGCATACAC+AGG | - | chr7.1:15911866-15911885 | None:intergenic | 50.0% | |
| ACCCCCGATAGGAAAGCAAA+CGG | - | chr7.1:15909955-15909974 | None:intergenic | 50.0% | |
| ACCGCCTACAAATTGGCACT+TGG | - | chr7.1:15911535-15911554 | None:intergenic | 50.0% | |
| ACGCACAGAGTCACATAGCA+CGG | + | chr7.1:15909444-15909463 | MS.gene42516:intron | 50.0% | |
| AGACATTTCCGAGGCACACA+TGG | - | chr7.1:15912078-15912097 | None:intergenic | 50.0% | |
| AGAGAGAAGGAAGTGGGAGT+TGG | - | chr7.1:15908400-15908419 | None:intergenic | 50.0% | |
| AGTGCAGACCGAAGAAGTTG+AGG | - | chr7.1:15912167-15912186 | None:intergenic | 50.0% | |
| ATTGCCCAATCACAGGCTCT+TGG | + | chr7.1:15911249-15911268 | MS.gene42516:CDS | 50.0% | |
| CAAAAGCTCCCGCATACACA+GGG | - | chr7.1:15911865-15911884 | None:intergenic | 50.0% | |
| CCAGCACCTTTCAACTTCTC+AGG | - | chr7.1:15909099-15909118 | None:intergenic | 50.0% | |
| CCAGTCCTCTTTACTAGGGA+AGG | - | chr7.1:15911043-15911062 | None:intergenic | 50.0% | |
| CCTTCCCTAGTAAAGAGGAC+TGG | + | chr7.1:15911040-15911059 | MS.gene42516:intron | 50.0% | |
| CTTCTCCAAGAGCCTGTGAT+TGG | - | chr7.1:15911257-15911276 | None:intergenic | 50.0% | |
| GAGTGCTATAAACCCCCGAT+AGG | - | chr7.1:15909966-15909985 | None:intergenic | 50.0% | |
| GCATACACAGGGTTTGGGAA+TGG | - | chr7.1:15911854-15911873 | None:intergenic | 50.0% | |
| GCCATATCTCAGGTCCATCT+GGG | - | chr7.1:15909515-15909534 | None:intergenic | 50.0% | |
| GTCGATTGAAGTCGTTGACG+AGG | - | chr7.1:15908440-15908459 | None:intergenic | 50.0% | |
| TACACATCGAAAAGGAGGGG+GGG | - | chr7.1:15912394-15912413 | None:intergenic | 50.0% | |
| TCCCAGATGGACCTGAGATA+TGG | + | chr7.1:15909511-15909530 | MS.gene42516:intron | 50.0% | |
| TCCGTTTGCTTTCCTATCGG+GGG | + | chr7.1:15909951-15909970 | MS.gene42516:intron | 50.0% | |
| TCCTTCGAGCGAAACCACTT+GGG | - | chr7.1:15909194-15909213 | None:intergenic | 50.0% | |
| TCGCTCGAAGGAGTTTGAGA+AGG | + | chr7.1:15909202-15909221 | MS.gene42516:intron | 50.0% | |
| TCGTAATTGGGAATCCGCGT+GGG | + | chr7.1:15908693-15908712 | MS.gene42516:CDS | 50.0% | |
| TGCCATATCTCAGGTCCATC+TGG | - | chr7.1:15909516-15909535 | None:intergenic | 50.0% | |
| TTCCCAAACCCTGTGTATGC+GGG | + | chr7.1:15911854-15911873 | MS.gene42516:intron | 50.0% | |
| TTCGTAATTGGGAATCCGCG+TGG | + | chr7.1:15908692-15908711 | MS.gene42516:CDS | 50.0% | |
| TTTCCACTCTCTCTATGGGG+GGG | + | chr7.1:15911323-15911342 | MS.gene42516:intron | 50.0% | |
| ! | ATGAAACGGCGTCGGAGAAA+CGG | - | chr7.1:15908335-15908354 | None:intergenic | 50.0% |
| ! | CACGCTTAGCACCTTTTACC+TGG | - | chr7.1:15909877-15909896 | None:intergenic | 50.0% |
| ! | CCTGAGAAGTTGAAAGGTGC+TGG | + | chr7.1:15909096-15909115 | MS.gene42516:CDS | 50.0% |
| ACACATCGAAAAGGAGGGGG+GGG | - | chr7.1:15912393-15912412 | None:intergenic | 55.0% | |
| ACCCAAGTGGTTTCGCTCGA+AGG | + | chr7.1:15909190-15909209 | MS.gene42516:intron | 55.0% | |
| AGCTCACCAGGTGAAGTTGG+AGG | + | chr7.1:15912500-15912519 | MS.gene42516:CDS | 55.0% | |
| CAGAGCTCACCAGGTGAAGT+TGG | + | chr7.1:15912497-15912516 | MS.gene42516:CDS | 55.0% | |
| CTCCCGCATACACAGGGTTT+GGG | - | chr7.1:15911859-15911878 | None:intergenic | 55.0% | |
| CTCCTTCGAGCGAAACCACT+TGG | - | chr7.1:15909195-15909214 | None:intergenic | 55.0% | |
| GGCGAGAGAGAGAAGGAAGT+GGG | - | chr7.1:15908406-15908425 | None:intergenic | 55.0% | |
| GGGGCGATCCTCAACTTCTT+CGG | + | chr7.1:15912156-15912175 | MS.gene42516:CDS | 55.0% | |
| GTGACTCTGTGCGTGTCTGT+GGG | - | chr7.1:15909438-15909457 | None:intergenic | 55.0% | |
| TACAGCTTCAAGAGCCCACG+CGG | - | chr7.1:15908710-15908729 | None:intergenic | 55.0% | |
| TCACCTGGTGAGCTCTGCTT+GGG | - | chr7.1:15912494-15912513 | None:intergenic | 55.0% | |
| TGACTCTGTGCGTGTCTGTG+GGG | - | chr7.1:15909437-15909456 | None:intergenic | 55.0% | |
| TGGGAATGGGTCCAACCATC+TGG | - | chr7.1:15911840-15911859 | None:intergenic | 55.0% | |
| TGTGACTCTGTGCGTGTCTG+TGG | - | chr7.1:15909439-15909458 | None:intergenic | 55.0% | |
| TTCACCTGGTGAGCTCTGCT+TGG | - | chr7.1:15912495-15912514 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTTGTGCAC+CGG | + | chr7.1:15911870-15911889 | MS.gene42516:intron | 55.0% |
| ! | GTTGACGAGGATGAGAGCGT+CGG | - | chr7.1:15908427-15908446 | None:intergenic | 55.0% |
| ACTCTGTGCGTGTCTGTGGG+GGG | - | chr7.1:15909435-15909454 | None:intergenic | 60.0% | |
| AGACCCAAGCAGAGCTCACC+AGG | + | chr7.1:15912488-15912507 | MS.gene42516:CDS | 60.0% | |
| CACATCGAAAAGGAGGGGGG+GGG | - | chr7.1:15912392-15912411 | None:intergenic | 60.0% | |
| CGGCGAGAGAGAGAAGGAAG+TGG | - | chr7.1:15908407-15908426 | None:intergenic | 60.0% | |
| GACTCTGTGCGTGTCTGTGG+GGG | - | chr7.1:15909436-15909455 | None:intergenic | 60.0% | |
| GCTCCCGCATACACAGGGTT+TGG | - | chr7.1:15911860-15911879 | None:intergenic | 60.0% | |
| GTACCCCCCCATAGAGAGAG+TGG | - | chr7.1:15911329-15911348 | None:intergenic | 60.0% | |
| TGTGCGTGTCTGTGGGGGGA+GGG | - | chr7.1:15909431-15909450 | None:intergenic | 65.0% | |
| ! | CGGCGTCGGAGAAACGGTTG+AGG | - | chr7.1:15908329-15908348 | None:intergenic | 65.0% |
| !! | GAGCGTCGGCGAGAGAGAGA+AGG | - | chr7.1:15908413-15908432 | None:intergenic | 65.0% |
| CGAAAAGGAGGGGGGGGGCA+AGG | - | chr7.1:15912387-15912406 | None:intergenic | 70.0% | |
| CTGTGCGTGTCTGTGGGGGG+AGG | - | chr7.1:15909432-15909451 | None:intergenic | 70.0% | |
| GTGCGTGTCTGTGGGGGGAG+GGG | - | chr7.1:15909430-15909449 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 15908279 | 15912822 | 15908279 | ID=MS.gene42516 |
| chr7.1 | mRNA | 15908279 | 15912822 | 15908279 | ID=MS.gene42516.t1;Parent=MS.gene42516 |
| chr7.1 | exon | 15908279 | 15908583 | 15908279 | ID=MS.gene42516.t1.exon1;Parent=MS.gene42516.t1 |
| chr7.1 | CDS | 15908279 | 15908583 | 15908279 | ID=cds.MS.gene42516.t1;Parent=MS.gene42516.t1 |
| chr7.1 | exon | 15908675 | 15908768 | 15908675 | ID=MS.gene42516.t1.exon2;Parent=MS.gene42516.t1 |
| chr7.1 | CDS | 15908675 | 15908768 | 15908675 | ID=cds.MS.gene42516.t1;Parent=MS.gene42516.t1 |
| chr7.1 | exon | 15909063 | 15909152 | 15909063 | ID=MS.gene42516.t1.exon3;Parent=MS.gene42516.t1 |
| chr7.1 | CDS | 15909063 | 15909152 | 15909063 | ID=cds.MS.gene42516.t1;Parent=MS.gene42516.t1 |
| chr7.1 | exon | 15909878 | 15909943 | 15909878 | ID=MS.gene42516.t1.exon4;Parent=MS.gene42516.t1 |
| chr7.1 | CDS | 15909878 | 15909943 | 15909878 | ID=cds.MS.gene42516.t1;Parent=MS.gene42516.t1 |
| chr7.1 | exon | 15910120 | 15910212 | 15910120 | ID=MS.gene42516.t1.exon5;Parent=MS.gene42516.t1 |
| chr7.1 | CDS | 15910120 | 15910212 | 15910120 | ID=cds.MS.gene42516.t1;Parent=MS.gene42516.t1 |
| chr7.1 | exon | 15910319 | 15910375 | 15910319 | ID=MS.gene42516.t1.exon6;Parent=MS.gene42516.t1 |
| chr7.1 | CDS | 15910319 | 15910375 | 15910319 | ID=cds.MS.gene42516.t1;Parent=MS.gene42516.t1 |
| chr7.1 | exon | 15910683 | 15910744 | 15910683 | ID=MS.gene42516.t1.exon7;Parent=MS.gene42516.t1 |
| chr7.1 | CDS | 15910683 | 15910744 | 15910683 | ID=cds.MS.gene42516.t1;Parent=MS.gene42516.t1 |
| chr7.1 | exon | 15911204 | 15911291 | 15911204 | ID=MS.gene42516.t1.exon8;Parent=MS.gene42516.t1 |
| chr7.1 | CDS | 15911204 | 15911291 | 15911204 | ID=cds.MS.gene42516.t1;Parent=MS.gene42516.t1 |
| chr7.1 | exon | 15912128 | 15912204 | 15912128 | ID=MS.gene42516.t1.exon9;Parent=MS.gene42516.t1 |
| chr7.1 | CDS | 15912128 | 15912204 | 15912128 | ID=cds.MS.gene42516.t1;Parent=MS.gene42516.t1 |
| chr7.1 | exon | 15912292 | 15912366 | 15912292 | ID=MS.gene42516.t1.exon10;Parent=MS.gene42516.t1 |
| chr7.1 | CDS | 15912292 | 15912366 | 15912292 | ID=cds.MS.gene42516.t1;Parent=MS.gene42516.t1 |
| chr7.1 | exon | 15912467 | 15912572 | 15912467 | ID=MS.gene42516.t1.exon11;Parent=MS.gene42516.t1 |
| chr7.1 | CDS | 15912467 | 15912572 | 15912467 | ID=cds.MS.gene42516.t1;Parent=MS.gene42516.t1 |
| chr7.1 | exon | 15912691 | 15912822 | 15912691 | ID=MS.gene42516.t1.exon12;Parent=MS.gene42516.t1 |
| chr7.1 | CDS | 15912691 | 15912822 | 15912691 | ID=cds.MS.gene42516.t1;Parent=MS.gene42516.t1 |
| Gene Sequence |
| Protein sequence |
