Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51454.t1 | XP_013468662.1 | 99 | 580 | 5 | 1 | 1 | 580 | 1 | 579 | 0.00E+00 | 1127.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51454.t1 | A0A072VL03 | 99.0 | 580 | 5 | 1 | 1 | 580 | 1 | 579 | 0.0e+00 | 1127.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene51454 | 0.806825 | 6.82E-50 | -1.69E-46 |
| MS.gene04920 | MS.gene51454 | 0.807229 | 5.60E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene51454 | 0.825489 | 4.56E-54 | -1.69E-46 |
| MS.gene049350 | MS.gene51454 | 0.800177 | 1.63E-48 | -1.69E-46 |
| MS.gene049680 | MS.gene51454 | 0.809708 | 1.66E-50 | -1.69E-46 |
| MS.gene049807 | MS.gene51454 | 0.828132 | 1.07E-54 | -1.69E-46 |
| MS.gene050945 | MS.gene51454 | 0.815774 | 7.78E-52 | -1.69E-46 |
| MS.gene051019 | MS.gene51454 | 0.802987 | 4.32E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene51454 | 0.805771 | 1.14E-49 | -1.69E-46 |
| MS.gene051538 | MS.gene51454 | 0.804219 | 2.40E-49 | -1.69E-46 |
| MS.gene051699 | MS.gene51454 | 0.814235 | 1.71E-51 | -1.69E-46 |
| MS.gene052118 | MS.gene51454 | 0.808461 | 3.06E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene51454 | 0.804353 | 2.25E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene51454 | 0.818642 | 1.76E-52 | -1.69E-46 |
| MS.gene052717 | MS.gene51454 | 0.807104 | 5.95E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene51454 | 0.806441 | 8.21E-50 | -1.69E-46 |
| MS.gene053272 | MS.gene51454 | -0.800403 | 1.47E-48 | -1.69E-46 |
| MS.gene054142 | MS.gene51454 | 0.823887 | 1.09E-53 | -1.69E-46 |
| MS.gene054178 | MS.gene51454 | 0.819875 | 9.23E-53 | -1.69E-46 |
| MS.gene054957 | MS.gene51454 | 0.802144 | 6.45E-49 | -1.69E-46 |
| MS.gene055229 | MS.gene51454 | 0.829285 | 5.61E-55 | -1.69E-46 |
| MS.gene055506 | MS.gene51454 | 0.807559 | 4.76E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene51454 | 0.832401 | 9.65E-56 | -1.69E-46 |
| MS.gene056699 | MS.gene51454 | 0.811904 | 5.54E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene51454 | 0.809842 | 1.55E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene51454 | 0.8687 | 5.37E-66 | -1.69E-46 |
| MS.gene057590 | MS.gene51454 | 0.806196 | 9.25E-50 | -1.69E-46 |
| MS.gene058279 | MS.gene51454 | 0.800082 | 1.70E-48 | -1.69E-46 |
| MS.gene058781 | MS.gene51454 | 0.80714 | 5.85E-50 | -1.69E-46 |
| MS.gene059778 | MS.gene51454 | 0.847661 | 1.00E-59 | -1.69E-46 |
| MS.gene05985 | MS.gene51454 | -0.882631 | 8.86E-71 | -1.69E-46 |
| MS.gene059901 | MS.gene51454 | -0.824464 | 7.96E-54 | -1.69E-46 |
| MS.gene060338 | MS.gene51454 | 0.819237 | 1.29E-52 | -1.69E-46 |
| MS.gene060512 | MS.gene51454 | 0.800839 | 1.19E-48 | -1.69E-46 |
| MS.gene060522 | MS.gene51454 | 0.814065 | 1.86E-51 | -1.69E-46 |
| MS.gene060525 | MS.gene51454 | 0.804469 | 2.13E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene51454 | 0.817808 | 2.72E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene51454 | 0.831869 | 1.31E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene51454 | 0.857716 | 1.35E-62 | -1.69E-46 |
| MS.gene061188 | MS.gene51454 | 0.833512 | 5.11E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51454.t1 | MTR_1g073890 | 98.966 | 580 | 5 | 1 | 1 | 580 | 1 | 579 | 0.0 | 1176 |
| MS.gene51454.t1 | MTR_1g044135 | 69.156 | 616 | 147 | 9 | 1 | 580 | 1 | 609 | 0.0 | 832 |
| MS.gene51454.t1 | MTR_6g461910 | 36.594 | 552 | 293 | 14 | 18 | 563 | 10 | 510 | 2.17e-90 | 288 |
| MS.gene51454.t1 | MTR_1g061540 | 35.075 | 536 | 302 | 12 | 29 | 549 | 17 | 521 | 2.78e-76 | 251 |
| MS.gene51454.t1 | MTR_7g103490 | 33.146 | 534 | 305 | 10 | 46 | 551 | 29 | 538 | 1.47e-72 | 243 |
| MS.gene51454.t1 | MTR_3g091180 | 56.571 | 175 | 62 | 3 | 391 | 560 | 415 | 580 | 6.81e-57 | 201 |
| MS.gene51454.t1 | MTR_3g091180 | 36.047 | 258 | 142 | 5 | 1 | 256 | 1 | 237 | 9.49e-40 | 153 |
| MS.gene51454.t1 | MTR_1g092540 | 57.692 | 156 | 66 | 0 | 399 | 554 | 423 | 578 | 1.05e-53 | 192 |
| MS.gene51454.t1 | MTR_1g092540 | 38.426 | 216 | 130 | 2 | 36 | 248 | 14 | 229 | 9.93e-42 | 159 |
| MS.gene51454.t1 | MTR_0318s0020 | 59.064 | 171 | 63 | 4 | 395 | 563 | 402 | 567 | 4.21e-53 | 191 |
| MS.gene51454.t1 | MTR_0318s0020 | 34.661 | 251 | 144 | 3 | 18 | 248 | 100 | 350 | 8.05e-34 | 136 |
| MS.gene51454.t1 | MTR_7g063040 | 42.396 | 217 | 119 | 2 | 38 | 248 | 17 | 233 | 2.23e-46 | 170 |
| MS.gene51454.t1 | MTR_7g063040 | 35.484 | 155 | 90 | 2 | 406 | 552 | 331 | 483 | 9.68e-25 | 108 |
| MS.gene51454.t1 | MTR_4g021260 | 43.458 | 214 | 112 | 2 | 44 | 248 | 17 | 230 | 5.23e-46 | 169 |
| MS.gene51454.t1 | MTR_4g021260 | 41.096 | 146 | 81 | 3 | 406 | 546 | 330 | 475 | 5.32e-29 | 120 |
| MS.gene51454.t1 | MTR_1g096970 | 33.488 | 215 | 134 | 3 | 46 | 254 | 51 | 262 | 3.93e-23 | 103 |
| MS.gene51454.t1 | MTR_1g096970 | 30.247 | 162 | 99 | 2 | 395 | 546 | 255 | 412 | 1.17e-14 | 77.4 |
| MS.gene51454.t1 | MTR_1g025340 | 29.796 | 245 | 152 | 6 | 46 | 281 | 127 | 360 | 4.73e-20 | 94.4 |
| MS.gene51454.t1 | MTR_1g025340 | 33.117 | 154 | 84 | 4 | 408 | 548 | 345 | 492 | 1.25e-13 | 74.3 |
| MS.gene51454.t1 | MTR_3g097240 | 30.734 | 218 | 146 | 4 | 46 | 261 | 141 | 355 | 6.98e-19 | 90.1 |
| MS.gene51454.t1 | MTR_3g097240 | 30.734 | 218 | 146 | 4 | 46 | 261 | 141 | 355 | 7.65e-19 | 89.7 |
| MS.gene51454.t1 | MTR_3g097240 | 30.734 | 218 | 146 | 4 | 46 | 261 | 141 | 355 | 1.61e-18 | 89.7 |
| MS.gene51454.t1 | MTR_3g097240 | 31.618 | 136 | 76 | 4 | 411 | 535 | 359 | 488 | 8.54e-11 | 65.1 |
| MS.gene51454.t1 | MTR_3g114010 | 30.660 | 212 | 134 | 4 | 46 | 249 | 122 | 328 | 7.20e-18 | 87.8 |
| MS.gene51454.t1 | MTR_3g114010 | 32.911 | 158 | 91 | 3 | 408 | 554 | 340 | 493 | 3.28e-15 | 79.3 |
| MS.gene51454.t1 | MTR_8g095080 | 30.233 | 215 | 141 | 3 | 46 | 254 | 150 | 361 | 2.56e-14 | 75.9 |
| MS.gene51454.t1 | MTR_8g095080 | 30.233 | 215 | 141 | 3 | 46 | 254 | 150 | 361 | 3.22e-14 | 76.3 |
| MS.gene51454.t1 | MTR_8g095080 | 29.412 | 136 | 79 | 4 | 411 | 535 | 373 | 502 | 3.98e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51454.t1 | AT3G23160 | 56.336 | 584 | 198 | 11 | 1 | 580 | 1 | 531 | 0.0 | 623 |
| MS.gene51454.t1 | AT5G04550 | 56.548 | 168 | 68 | 2 | 406 | 568 | 428 | 595 | 2.14e-56 | 200 |
| MS.gene51454.t1 | AT5G04550 | 36.406 | 217 | 137 | 1 | 35 | 250 | 14 | 230 | 3.89e-40 | 154 |
| MS.gene51454.t1 | AT5G04550 | 56.548 | 168 | 68 | 2 | 406 | 568 | 428 | 595 | 2.14e-56 | 200 |
| MS.gene51454.t1 | AT5G04550 | 36.406 | 217 | 137 | 1 | 35 | 250 | 14 | 230 | 3.89e-40 | 154 |
| MS.gene51454.t1 | AT5G51670 | 53.988 | 163 | 65 | 3 | 407 | 565 | 311 | 467 | 2.43e-48 | 175 |
| MS.gene51454.t1 | AT5G51670 | 29.658 | 263 | 163 | 2 | 1 | 250 | 1 | 254 | 8.06e-29 | 120 |
| MS.gene51454.t1 | AT5G51670 | 53.988 | 163 | 65 | 3 | 407 | 565 | 311 | 467 | 2.43e-48 | 175 |
| MS.gene51454.t1 | AT5G51670 | 29.658 | 263 | 163 | 2 | 1 | 250 | 1 | 254 | 8.06e-29 | 120 |
| MS.gene51454.t1 | AT1G34320 | 30.672 | 238 | 148 | 4 | 46 | 275 | 155 | 383 | 4.31e-22 | 101 |
| MS.gene51454.t1 | AT1G34320 | 30.719 | 153 | 88 | 4 | 407 | 546 | 373 | 520 | 1.04e-12 | 71.2 |
| MS.gene51454.t1 | AT1G34320 | 30.672 | 238 | 148 | 4 | 46 | 275 | 155 | 383 | 4.31e-22 | 101 |
| MS.gene51454.t1 | AT1G34320 | 30.719 | 153 | 88 | 4 | 407 | 546 | 373 | 520 | 1.04e-12 | 71.2 |
| MS.gene51454.t1 | AT1G30755 | 27.315 | 216 | 148 | 2 | 46 | 255 | 134 | 346 | 3.81e-15 | 78.6 |
| MS.gene51454.t1 | AT1G30755 | 27.315 | 216 | 148 | 2 | 46 | 255 | 134 | 346 | 4.33e-15 | 78.2 |
| MS.gene51454.t1 | AT1G30755 | 27.315 | 216 | 148 | 2 | 46 | 255 | 134 | 346 | 4.33e-15 | 78.2 |
| MS.gene51454.t1 | AT1G30755 | 27.315 | 216 | 148 | 2 | 46 | 255 | 134 | 346 | 4.52e-15 | 79.0 |
| MS.gene51454.t1 | AT1G30755 | 27.315 | 216 | 148 | 2 | 46 | 255 | 134 | 346 | 4.52e-15 | 79.0 |
| MS.gene51454.t1 | AT1G30755 | 27.315 | 216 | 148 | 2 | 46 | 255 | 134 | 346 | 4.52e-15 | 79.0 |
| MS.gene51454.t1 | AT5G08660 | 32.547 | 212 | 128 | 4 | 46 | 248 | 149 | 354 | 2.75e-12 | 69.7 |
| MS.gene51454.t1 | AT5G08660 | 32.547 | 212 | 128 | 4 | 46 | 248 | 149 | 354 | 2.96e-12 | 70.1 |
| MS.gene51454.t1 | AT5G08660 | 34.586 | 133 | 70 | 4 | 411 | 532 | 372 | 498 | 3.34e-12 | 69.7 |
| MS.gene51454.t1 | AT5G08660 | 32.547 | 212 | 128 | 4 | 46 | 248 | 149 | 354 | 2.96e-12 | 70.1 |
| MS.gene51454.t1 | AT5G08660 | 34.586 | 133 | 70 | 4 | 411 | 532 | 372 | 498 | 3.34e-12 | 69.7 |
| MS.gene51454.t1 | AT5G08660 | 32.547 | 212 | 128 | 4 | 46 | 248 | 149 | 354 | 2.96e-12 | 70.1 |
| MS.gene51454.t1 | AT5G08660 | 34.586 | 133 | 70 | 4 | 411 | 532 | 372 | 498 | 3.34e-12 | 69.7 |
Find 126 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAGAGGGTGTTAGGAATT+TGG | 0.165683 | 1.4:-60497316 | MS.gene51454:CDS |
| TAGGAGTTTGTATAGTAAAA+TGG | 0.207230 | 1.4:-60497055 | MS.gene51454:CDS |
| TTTATAAAGTTGAATGGTTT+TGG | 0.228524 | 1.4:+60497386 | None:intergenic |
| CTTAGCTTTCCACATTTAAT+TGG | 0.238050 | 1.4:-60496268 | MS.gene51454:CDS |
| TAAGACATATGTCAAGAATT+TGG | 0.242976 | 1.4:-60496176 | MS.gene51454:CDS |
| GCTATATGTGAACTTCTTAA+AGG | 0.250975 | 1.4:-60495959 | MS.gene51454:CDS |
| ACAACAGCTAATCCACTATT+TGG | 0.258196 | 1.4:+60496370 | None:intergenic |
| GTGTTGCTGGTGTGGTTTCT+AGG | 0.267385 | 1.4:-60497230 | MS.gene51454:CDS |
| TGGAAATATTGTCAAGAAAA+AGG | 0.289545 | 1.4:-60496416 | MS.gene51454:CDS |
| TATGTTCAACTTGAAGATTT+TGG | 0.292464 | 1.4:-60496589 | MS.gene51454:CDS |
| TCAAGCTCTCAAAGTCCTAT+TGG | 0.302945 | 1.4:-60496442 | MS.gene51454:CDS |
| CTCTTCTACTCTCCCCATTC+TGG | 0.305632 | 1.4:+60496983 | None:intergenic |
| TATGCTCCTCCTTCTACTCT+TGG | 0.307855 | 1.4:-60496346 | MS.gene51454:CDS |
| CTTGACATATGTCTTAAGTT+TGG | 0.310915 | 1.4:+60496183 | None:intergenic |
| GTAGAAAACATGGTCCTAAA+AGG | 0.314812 | 1.4:-60497470 | MS.gene51454:CDS |
| GGTTACAATTTGAGTTCAAT+TGG | 0.318849 | 1.4:-60496667 | MS.gene51454:CDS |
| GCTGGTGTGGTTTCTAGGTT+AGG | 0.323657 | 1.4:-60497225 | MS.gene51454:CDS |
| ACAACAACAAAACGCATTAC+TGG | 0.333831 | 1.4:-60495912 | MS.gene51454:CDS |
| GGAAGGAATGGTGAGGAAAA+TGG | 0.336491 | 1.4:-60497097 | MS.gene51454:CDS |
| ATTTGGAAGATTGCATGAAA+TGG | 0.336800 | 1.4:-60495871 | MS.gene51454:CDS |
| AGGAGTTTGTATAGTAAAAT+GGG | 0.339974 | 1.4:-60497054 | MS.gene51454:CDS |
| TTGTGCAAGCAGTTTCAATT+TGG | 0.348203 | 1.4:-60495888 | MS.gene51454:CDS |
| TAGAAGAAGTTTCAAGCAAA+AGG | 0.354356 | 1.4:+60497496 | None:intergenic |
| GTTATAGATGTGAATGAATT+GGG | 0.361108 | 1.4:-60497138 | MS.gene51454:CDS |
| TAGCTTAAGGTTATCTTTGA+AGG | 0.361906 | 1.4:-60496206 | MS.gene51454:CDS |
| GTTTAATATTTGCACTTACT+TGG | 0.364850 | 1.4:+60497523 | None:intergenic |
| GTTACAATTTGAGTTCAATT+GGG | 0.373341 | 1.4:-60496666 | MS.gene51454:CDS |
| CATTCCATGAAAAGTCTTCC+AGG | 0.373626 | 1.4:+60496547 | None:intergenic |
| TGCAAGAGGGGCATCATATA+TGG | 0.376522 | 1.4:+60496153 | None:intergenic |
| TCTTGAACTCAGAGGGTGTT+AGG | 0.377364 | 1.4:-60497323 | MS.gene51454:CDS |
| TGTTATAGATGTGAATGAAT+TGG | 0.381186 | 1.4:-60497139 | MS.gene51454:CDS |
| CGCAGTCATAGCAAGAAAAC+TGG | 0.386237 | 1.4:-60496688 | MS.gene51454:CDS |
| GGTTTGAGCAGAGGCTTGTA+TGG | 0.386287 | 1.4:-60496960 | MS.gene51454:CDS |
| ACAATATTTCCAATCCCAAT+AGG | 0.393961 | 1.4:+60496427 | None:intergenic |
| AATAAGAAAGTAGAAACTAT+AGG | 0.400565 | 1.4:-60497441 | MS.gene51454:CDS |
| GCACATCCTCCAAGAGTAGA+AGG | 0.403510 | 1.4:+60496337 | None:intergenic |
| TGATAAGGTTGTTGAGTTGT+TGG | 0.404841 | 1.4:-60496884 | MS.gene51454:CDS |
| TCAACCTTTGGTCCAAATAG+TGG | 0.405123 | 1.4:-60496382 | MS.gene51454:CDS |
| AGATGTTGCCAACTAGCTTA+AGG | 0.410569 | 1.4:-60496219 | MS.gene51454:CDS |
| CAAGCTCTCAAAGTCCTATT+GGG | 0.410774 | 1.4:-60496441 | MS.gene51454:CDS |
| AAAGATAACCTTAAGCTAGT+TGG | 0.416185 | 1.4:+60496211 | None:intergenic |
| GAGGAATTGAACCGTGTTGC+TGG | 0.417423 | 1.4:-60497243 | MS.gene51454:CDS |
| TTCAGAATAATAGCCAGAAT+GGG | 0.425837 | 1.4:-60496996 | MS.gene51454:CDS |
| GACTGGAAGGCGACTCTTGA+CGG | 0.432150 | 1.4:-60496127 | MS.gene51454:CDS |
| ATGCCCCTCTTGCACATGAC+TGG | 0.436871 | 1.4:-60496144 | MS.gene51454:CDS |
| TTTCCTTGTGGAACAAGTCC+TGG | 0.437137 | 1.4:-60496565 | MS.gene51454:CDS |
| AATCTGAGATAGCAAAGTTA+AGG | 0.437201 | 1.4:-60497353 | MS.gene51454:CDS |
| TTGCTCATAATATGATGAAA+TGG | 0.441213 | 1.4:-60496081 | MS.gene51454:CDS |
| CAATGATTTATAAAGTTGAA+TGG | 0.441919 | 1.4:+60497380 | None:intergenic |
| GAGCACTTATGCTCAACCTT+TGG | 0.443046 | 1.4:-60496394 | MS.gene51454:CDS |
| TTTCAGAATAATAGCCAGAA+TGG | 0.444882 | 1.4:-60496997 | MS.gene51454:CDS |
| GCAAGATGTGAGGCAGCTTA+AGG | 0.445171 | 1.4:-60496932 | MS.gene51454:CDS |
| TGTTCTGTGCCTGCTTTGCA+AGG | 0.446637 | 1.4:-60497195 | MS.gene51454:CDS |
| GCTCCTCCTTCTACTCTTGG+AGG | 0.447412 | 1.4:-60496343 | MS.gene51454:CDS |
| AGAAGAAGTTTCAAGCAAAA+GGG | 0.448546 | 1.4:+60497497 | None:intergenic |
| TGCTCAAACCCTTGCAAAGC+AGG | 0.449040 | 1.4:+60497186 | None:intergenic |
| CTGGTGTGGTTTCTAGGTTA+GGG | 0.450011 | 1.4:-60497224 | MS.gene51454:CDS |
| GCAAGAATCTGTATGGTCTT+TGG | 0.454280 | 1.4:-60496838 | MS.gene51454:CDS |
| TAGCTATGGTTGCTGAAGCT+TGG | 0.455269 | 1.4:-60497563 | None:intergenic |
| CAAGGGTTTGAGCATGTGTA+TGG | 0.470411 | 1.4:-60497177 | MS.gene51454:CDS |
| CATACAGATTCTTGCATACA+AGG | 0.476054 | 1.4:+60496846 | None:intergenic |
| AGGAAGGATGGCCTTGGGAT+TGG | 0.480331 | 1.4:-60496802 | MS.gene51454:CDS |
| CAGAATGGGGAGAGTAGAAG+AGG | 0.480582 | 1.4:-60496982 | MS.gene51454:CDS |
| CTTGTATGCAAGAATCTGTA+TGG | 0.486624 | 1.4:-60496845 | MS.gene51454:CDS |
| TCTCAAAGTCCTATTGGGAT+TGG | 0.494966 | 1.4:-60496436 | MS.gene51454:CDS |
| GGGGAAATGGTAGTAGTAGT+AGG | 0.496717 | 1.4:-60496645 | MS.gene51454:CDS |
| ACAGTGAGGAAGGATGGCCT+TGG | 0.497066 | 1.4:-60496808 | MS.gene51454:CDS |
| AGTTAAGCATATGGAAGGAA+TGG | 0.497345 | 1.4:-60497109 | MS.gene51454:CDS |
| AGCTTGATACGCAACTGTAT+TGG | 0.501566 | 1.4:+60496458 | None:intergenic |
| GTGTATGGTGATATTGTTAG+TGG | 0.502554 | 1.4:-60497162 | MS.gene51454:CDS |
| ACTGGAAGGCGACTCTTGAC+GGG | 0.504468 | 1.4:-60496126 | MS.gene51454:CDS |
| CAACAACAAAACGCATTACT+GGG | 0.507166 | 1.4:-60495911 | MS.gene51454:CDS |
| CAGTGAGGAAGGATGGCCTT+GGG | 0.515523 | 1.4:-60496807 | MS.gene51454:CDS |
| AATTTGGTTTCTTCAGAAGA+GGG | 0.530169 | 1.4:-60497300 | MS.gene51454:CDS |
| ATAGGTATGTGAGTGCTACT+AGG | 0.530403 | 1.4:-60497074 | MS.gene51454:CDS |
| GTAGAAGAGGGTTTGAGCAG+AGG | 0.533791 | 1.4:-60496969 | MS.gene51454:CDS |
| GTCTAGCTTGATTAATGTTG+AGG | 0.536642 | 1.4:-60496734 | MS.gene51454:CDS |
| AGCAACGCGGAATAGTTAGC+AGG | 0.538226 | 1.4:-60496039 | MS.gene51454:CDS |
| CGTGCAAAATGAATGTGGTT+CGG | 0.539337 | 1.4:-60496758 | MS.gene51454:CDS |
| CTTGGGATTGGTAATTGTGA+AGG | 0.540837 | 1.4:-60496790 | MS.gene51454:CDS |
| CCCTCTTGCACATGACTGGA+AGG | 0.541581 | 1.4:-60496140 | MS.gene51454:CDS |
| TAATGTTGAGGTGAATTTGT+CGG | 0.544358 | 1.4:-60496722 | MS.gene51454:CDS |
| GTTCTGTGCCTGCTTTGCAA+GGG | 0.544878 | 1.4:-60497194 | MS.gene51454:CDS |
| TGGTGATTCTACAGTGAGGA+AGG | 0.551462 | 1.4:-60496818 | MS.gene51454:CDS |
| TTACAATTTGAGTTCAATTG+GGG | 0.555673 | 1.4:-60496665 | MS.gene51454:CDS |
| ATTGAACCGTGTTGCTGGTG+TGG | 0.556958 | 1.4:-60497238 | MS.gene51454:CDS |
| GAATTTGGTTTCTTCAGAAG+AGG | 0.557080 | 1.4:-60497301 | MS.gene51454:CDS |
| TAATCCACTATTTGGACCAA+AGG | 0.563309 | 1.4:+60496378 | None:intergenic |
| GGAGTTTGTATAGTAAAATG+GGG | 0.565248 | 1.4:-60497053 | MS.gene51454:CDS |
| GAGTTTGTATAGTAAAATGG+GGG | 0.573559 | 1.4:-60497052 | MS.gene51454:CDS |
| CCTTCCAGTCATGTGCAAGA+GGG | 0.574005 | 1.4:+60496140 | None:intergenic |
| GCCTTCCAGTCATGTGCAAG+AGG | 0.575283 | 1.4:+60496139 | None:intergenic |
| CTCTTGACGGGATACTTCGG+TGG | 0.576945 | 1.4:-60496114 | MS.gene51454:CDS |
| GATTCTACAGTGAGGAAGGA+TGG | 0.578251 | 1.4:-60496814 | MS.gene51454:CDS |
| AGGTTGTTGAGTTGTTGGCT+AGG | 0.583359 | 1.4:-60496879 | MS.gene51454:CDS |
| CGACTCTTGACGGGATACTT+CGG | 0.583427 | 1.4:-60496117 | MS.gene51454:CDS |
| TTATAGATGTGAATGAATTG+GGG | 0.583468 | 1.4:-60497137 | MS.gene51454:CDS |
| TTCATCATATTATGAGCAAG+CGG | 0.586075 | 1.4:+60496085 | None:intergenic |
| GAATGGTGAGGAAAATGGAT+AGG | 0.586857 | 1.4:-60497092 | MS.gene51454:CDS |
| CTTTCCACATTTAATTGGCG+AGG | 0.591587 | 1.4:-60496263 | MS.gene51454:CDS |
| AATGAGATCTTGAACTCAGA+GGG | 0.592154 | 1.4:-60497330 | MS.gene51454:CDS |
| TGATGAAATGGCAAAGTGAG+AGG | 0.594896 | 1.4:-60496069 | MS.gene51454:CDS |
| CGCAACTGTATTGGTCCTCA+CGG | 0.599401 | 1.4:+60496467 | None:intergenic |
| CTTCCAGTCATGTGCAAGAG+GGG | 0.606461 | 1.4:+60496141 | None:intergenic |
| AGCTTAAGGAGATTTCACTT+TGG | 0.607378 | 1.4:-60496918 | MS.gene51454:CDS |
| GCTTCCTCGCCAATTAAATG+TGG | 0.610343 | 1.4:+60496259 | None:intergenic |
| CTTCCAGGACTTGTTCCACA+AGG | 0.627608 | 1.4:+60496562 | None:intergenic |
| TCTTCTACTAGTAGAAAACA+TGG | 0.643423 | 1.4:-60497480 | MS.gene51454:CDS |
| AGCATATGGAAGGAATGGTG+AGG | 0.646265 | 1.4:-60497104 | MS.gene51454:CDS |
| CCACTCGTGCAAAATGAATG+TGG | 0.648437 | 1.4:-60496763 | MS.gene51454:CDS |
| TACAATTTGAGTTCAATTGG+GGG | 0.659607 | 1.4:-60496664 | MS.gene51454:CDS |
| AGTTTGTATAGTAAAATGGG+GGG | 0.660331 | 1.4:-60497051 | MS.gene51454:CDS |
| AGAATGGGGAGAGTAGAAGA+GGG | 0.664493 | 1.4:-60496981 | MS.gene51454:CDS |
| CTTCACAATTACCAATCCCA+AGG | 0.665664 | 1.4:+60496791 | None:intergenic |
| TCTCATATAGATATGAAGAG+AGG | 0.666893 | 1.4:-60496622 | MS.gene51454:CDS |
| TCAGAATAATAGCCAGAATG+GGG | 0.670464 | 1.4:-60496995 | MS.gene51454:CDS |
| TAGAAACCACACCAGCAACA+CGG | 0.680939 | 1.4:+60497232 | None:intergenic |
| TGCTGATAAGATAAAGACAG+AGG | 0.688697 | 1.4:-60495984 | MS.gene51454:CDS |
| TGATAAGATAAAGACAGAGG+AGG | 0.690818 | 1.4:-60495981 | MS.gene51454:CDS |
| CATCCTCCAAGAGTAGAAGG+AGG | 0.691868 | 1.4:+60496340 | None:intergenic |
| GAATGAGATCTTGAACTCAG+AGG | 0.696161 | 1.4:-60497331 | MS.gene51454:CDS |
| TGTTCGACGTGAGAAGCTCG+AGG | 0.696638 | 1.4:-60497262 | MS.gene51454:CDS |
| TATGGCAGAAGCAAGATGTG+AGG | 0.708787 | 1.4:-60496942 | MS.gene51454:CDS |
| TGATGTTGCTATCGACCGTG+AGG | 0.708973 | 1.4:-60496482 | MS.gene51454:CDS |
| TCTTTGGTGATTCTACAGTG+AGG | 0.750317 | 1.4:-60496822 | MS.gene51454:CDS |
| ATGAAATGGAAATTGCAGTG+CGG | 0.848060 | 1.4:-60495857 | MS.gene51454:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGAAAGTAGAAACTAT+AGG | - | chr1.4:60495955-60495974 | MS.gene51454:CDS | 20.0% |
| !! | CAATGATTTATAAAGTTGAA+TGG | + | chr1.4:60496019-60496038 | None:intergenic | 20.0% |
| !!! | TTTATAAAGTTGAATGGTTT+TGG | + | chr1.4:60496013-60496032 | None:intergenic | 20.0% |
| ! | AGGAGTTTGTATAGTAAAAT+GGG | - | chr1.4:60496342-60496361 | MS.gene51454:CDS | 25.0% |
| ! | GTTATAGATGTGAATGAATT+GGG | - | chr1.4:60496258-60496277 | MS.gene51454:CDS | 25.0% |
| ! | GTTTAATATTTGCACTTACT+TGG | + | chr1.4:60495876-60495895 | None:intergenic | 25.0% |
| ! | TAAGACATATGTCAAGAATT+TGG | - | chr1.4:60497220-60497239 | MS.gene51454:CDS | 25.0% |
| ! | TAGGAGTTTGTATAGTAAAA+TGG | - | chr1.4:60496341-60496360 | MS.gene51454:CDS | 25.0% |
| ! | TGGAAATATTGTCAAGAAAA+AGG | - | chr1.4:60496980-60496999 | MS.gene51454:CDS | 25.0% |
| ! | TGTTATAGATGTGAATGAAT+TGG | - | chr1.4:60496257-60496276 | MS.gene51454:CDS | 25.0% |
| ! | TTATAGATGTGAATGAATTG+GGG | - | chr1.4:60496259-60496278 | MS.gene51454:CDS | 25.0% |
| ! | TTGCTCATAATATGATGAAA+TGG | - | chr1.4:60497315-60497334 | MS.gene51454:CDS | 25.0% |
| !! | GTTACAATTTGAGTTCAATT+GGG | - | chr1.4:60496730-60496749 | MS.gene51454:CDS | 25.0% |
| !! | TATGTTCAACTTGAAGATTT+TGG | - | chr1.4:60496807-60496826 | MS.gene51454:CDS | 25.0% |
| !! | TTACAATTTGAGTTCAATTG+GGG | - | chr1.4:60496731-60496750 | MS.gene51454:CDS | 25.0% |
| !! | TTCTTATTCTCTTTCCTTTT+AGG | + | chr1.4:60495943-60495962 | None:intergenic | 25.0% |
| !!! | TTTTTAGTTAAGCATATGGA+AGG | - | chr1.4:60496282-60496301 | MS.gene51454:CDS | 25.0% |
| AAAGATAACCTTAAGCTAGT+TGG | + | chr1.4:60497188-60497207 | None:intergenic | 30.0% | |
| ACAATATTTCCAATCCCAAT+AGG | + | chr1.4:60496972-60496991 | None:intergenic | 30.0% | |
| AGAAGAAGTTTCAAGCAAAA+GGG | + | chr1.4:60495902-60495921 | None:intergenic | 30.0% | |
| AGTTTGTATAGTAAAATGGG+GGG | - | chr1.4:60496345-60496364 | MS.gene51454:CDS | 30.0% | |
| ATTTGGAAGATTGCATGAAA+TGG | - | chr1.4:60497525-60497544 | MS.gene51454:CDS | 30.0% | |
| CTTGACATATGTCTTAAGTT+TGG | + | chr1.4:60497216-60497235 | None:intergenic | 30.0% | |
| GAGTTTGTATAGTAAAATGG+GGG | - | chr1.4:60496344-60496363 | MS.gene51454:CDS | 30.0% | |
| GCTATATGTGAACTTCTTAA+AGG | - | chr1.4:60497437-60497456 | MS.gene51454:CDS | 30.0% | |
| GGAGTTTGTATAGTAAAATG+GGG | - | chr1.4:60496343-60496362 | MS.gene51454:CDS | 30.0% | |
| TAATGTTGAGGTGAATTTGT+CGG | - | chr1.4:60496674-60496693 | MS.gene51454:CDS | 30.0% | |
| TAGAAGAAGTTTCAAGCAAA+AGG | + | chr1.4:60495903-60495922 | None:intergenic | 30.0% | |
| TAGCTTAAGGTTATCTTTGA+AGG | - | chr1.4:60497190-60497209 | MS.gene51454:CDS | 30.0% | |
| TCTCATATAGATATGAAGAG+AGG | - | chr1.4:60496774-60496793 | MS.gene51454:CDS | 30.0% | |
| TCTTCTACTAGTAGAAAACA+TGG | - | chr1.4:60495916-60495935 | MS.gene51454:CDS | 30.0% | |
| TTCAGAATAATAGCCAGAAT+GGG | - | chr1.4:60496400-60496419 | MS.gene51454:CDS | 30.0% | |
| TTCATCATATTATGAGCAAG+CGG | + | chr1.4:60497314-60497333 | None:intergenic | 30.0% | |
| TTTCAGAATAATAGCCAGAA+TGG | - | chr1.4:60496399-60496418 | MS.gene51454:CDS | 30.0% | |
| ! | AATCTGAGATAGCAAAGTTA+AGG | - | chr1.4:60496043-60496062 | MS.gene51454:CDS | 30.0% |
| ! | AATTTGGTTTCTTCAGAAGA+GGG | - | chr1.4:60496096-60496115 | MS.gene51454:CDS | 30.0% |
| ! | CTTAGCTTTCCACATTTAAT+TGG | - | chr1.4:60497128-60497147 | MS.gene51454:CDS | 30.0% |
| ! | GGTTACAATTTGAGTTCAAT+TGG | - | chr1.4:60496729-60496748 | MS.gene51454:CDS | 30.0% |
| ! | TACAATTTGAGTTCAATTGG+GGG | - | chr1.4:60496732-60496751 | MS.gene51454:CDS | 30.0% |
| ! | TTGGAATCAGACTTTTGATA+AGG | - | chr1.4:60496497-60496516 | MS.gene51454:CDS | 30.0% |
| AATGAGATCTTGAACTCAGA+GGG | - | chr1.4:60496066-60496085 | MS.gene51454:CDS | 35.0% | |
| ACAACAACAAAACGCATTAC+TGG | - | chr1.4:60497484-60497503 | MS.gene51454:CDS | 35.0% | |
| ACAACAGCTAATCCACTATT+TGG | + | chr1.4:60497029-60497048 | None:intergenic | 35.0% | |
| AGCTTAAGGAGATTTCACTT+TGG | - | chr1.4:60496478-60496497 | MS.gene51454:CDS | 35.0% | |
| AGTTAAGCATATGGAAGGAA+TGG | - | chr1.4:60496287-60496306 | MS.gene51454:CDS | 35.0% | |
| ATGAAATGGAAATTGCAGTG+CGG | - | chr1.4:60497539-60497558 | MS.gene51454:CDS | 35.0% | |
| CAACAACAAAACGCATTACT+GGG | - | chr1.4:60497485-60497504 | MS.gene51454:CDS | 35.0% | |
| CATACAGATTCTTGCATACA+AGG | + | chr1.4:60496553-60496572 | None:intergenic | 35.0% | |
| CTTGTATGCAAGAATCTGTA+TGG | - | chr1.4:60496551-60496570 | MS.gene51454:CDS | 35.0% | |
| GTAGAAAACATGGTCCTAAA+AGG | - | chr1.4:60495926-60495945 | MS.gene51454:CDS | 35.0% | |
| GTGTATGGTGATATTGTTAG+TGG | - | chr1.4:60496234-60496253 | MS.gene51454:CDS | 35.0% | |
| TAATCCACTATTTGGACCAA+AGG | + | chr1.4:60497021-60497040 | None:intergenic | 35.0% | |
| TCAGAATAATAGCCAGAATG+GGG | - | chr1.4:60496401-60496420 | MS.gene51454:CDS | 35.0% | |
| TGATAAGATAAAGACAGAGG+AGG | - | chr1.4:60497415-60497434 | MS.gene51454:CDS | 35.0% | |
| TGCTGATAAGATAAAGACAG+AGG | - | chr1.4:60497412-60497431 | MS.gene51454:CDS | 35.0% | |
| TTGTGCAAGCAGTTTCAATT+TGG | - | chr1.4:60497508-60497527 | MS.gene51454:CDS | 35.0% | |
| ! | GAATTTGGTTTCTTCAGAAG+AGG | - | chr1.4:60496095-60496114 | MS.gene51454:CDS | 35.0% |
| ! | GTCTAGCTTGATTAATGTTG+AGG | - | chr1.4:60496662-60496681 | MS.gene51454:CDS | 35.0% |
| ! | TGATAAGGTTGTTGAGTTGT+TGG | - | chr1.4:60496512-60496531 | MS.gene51454:CDS | 35.0% |
| !! | GAAGCTTGGATTTTGAAGAT+GGG | - | chr1.4:60495847-60495866 | MS.gene51454:CDS | 35.0% |
| !! | TGAAGCTTGGATTTTGAAGA+TGG | - | chr1.4:60495846-60495865 | MS.gene51454:CDS | 35.0% |
| !!! | GAAGATTTTGGTTTTCCTTG+TGG | - | chr1.4:60496819-60496838 | MS.gene51454:CDS | 35.0% |
| !!! | GGGGTTTTTAGTTAAGCATA+TGG | - | chr1.4:60496278-60496297 | MS.gene51454:CDS | 35.0% |
| AGCTTGATACGCAACTGTAT+TGG | + | chr1.4:60496941-60496960 | None:intergenic | 40.0% | |
| CAAGCTCTCAAAGTCCTATT+GGG | - | chr1.4:60496955-60496974 | MS.gene51454:CDS | 40.0% | |
| CATTCCATGAAAAGTCTTCC+AGG | + | chr1.4:60496852-60496871 | None:intergenic | 40.0% | |
| CGTGCAAAATGAATGTGGTT+CGG | - | chr1.4:60496638-60496657 | MS.gene51454:CDS | 40.0% | |
| CTTCACAATTACCAATCCCA+AGG | + | chr1.4:60496608-60496627 | None:intergenic | 40.0% | |
| CTTTCCACATTTAATTGGCG+AGG | - | chr1.4:60497133-60497152 | MS.gene51454:CDS | 40.0% | |
| GAATGAGATCTTGAACTCAG+AGG | - | chr1.4:60496065-60496084 | MS.gene51454:CDS | 40.0% | |
| GAATGGTGAGGAAAATGGAT+AGG | - | chr1.4:60496304-60496323 | MS.gene51454:CDS | 40.0% | |
| GCAAGAATCTGTATGGTCTT+TGG | - | chr1.4:60496558-60496577 | MS.gene51454:CDS | 40.0% | |
| TCAACCTTTGGTCCAAATAG+TGG | - | chr1.4:60497014-60497033 | MS.gene51454:CDS | 40.0% | |
| TCAAGCTCTCAAAGTCCTAT+TGG | - | chr1.4:60496954-60496973 | MS.gene51454:CDS | 40.0% | |
| TCTCAAAGTCCTATTGGGAT+TGG | - | chr1.4:60496960-60496979 | MS.gene51454:CDS | 40.0% | |
| TGATGAAATGGCAAAGTGAG+AGG | - | chr1.4:60497327-60497346 | MS.gene51454:CDS | 40.0% | |
| TTGAGTTCAATTGGGGGAAA+TGG | - | chr1.4:60496738-60496757 | MS.gene51454:CDS | 40.0% | |
| ! | AAGTCCTGGAAGACTTTTCA+TGG | - | chr1.4:60496845-60496864 | MS.gene51454:CDS | 40.0% |
| ! | AGATGTTGCCAACTAGCTTA+AGG | - | chr1.4:60497177-60497196 | MS.gene51454:CDS | 40.0% |
| ! | ATAGGTATGTGAGTGCTACT+AGG | - | chr1.4:60496322-60496341 | MS.gene51454:CDS | 40.0% |
| ! | CTTGGGATTGGTAATTGTGA+AGG | - | chr1.4:60496606-60496625 | MS.gene51454:CDS | 40.0% |
| ! | TCTTTGGTGATTCTACAGTG+AGG | - | chr1.4:60496574-60496593 | MS.gene51454:CDS | 40.0% |
| AATGGGGGGTTTGAATGAGT+TGG | - | chr1.4:60496359-60496378 | MS.gene51454:CDS | 45.0% | |
| AGAATGGGGAGAGTAGAAGA+GGG | - | chr1.4:60496415-60496434 | MS.gene51454:CDS | 45.0% | |
| AGCATATGGAAGGAATGGTG+AGG | - | chr1.4:60496292-60496311 | MS.gene51454:CDS | 45.0% | |
| CAAGGGTTTGAGCATGTGTA+TGG | - | chr1.4:60496219-60496238 | MS.gene51454:CDS | 45.0% | |
| CCACTCGTGCAAAATGAATG+TGG | - | chr1.4:60496633-60496652 | MS.gene51454:CDS | 45.0% | |
| CGCAGTCATAGCAAGAAAAC+TGG | - | chr1.4:60496708-60496727 | MS.gene51454:CDS | 45.0% | |
| GAGCACTTATGCTCAACCTT+TGG | - | chr1.4:60497002-60497021 | MS.gene51454:CDS | 45.0% | |
| GATTCTACAGTGAGGAAGGA+TGG | - | chr1.4:60496582-60496601 | MS.gene51454:CDS | 45.0% | |
| GCTTCCTCGCCAATTAAATG+TGG | + | chr1.4:60497140-60497159 | None:intergenic | 45.0% | |
| GGAAGGAATGGTGAGGAAAA+TGG | - | chr1.4:60496299-60496318 | MS.gene51454:CDS | 45.0% | |
| GGGGAAATGGTAGTAGTAGT+AGG | - | chr1.4:60496751-60496770 | MS.gene51454:CDS | 45.0% | |
| TAGAAACCACACCAGCAACA+CGG | + | chr1.4:60496167-60496186 | None:intergenic | 45.0% | |
| TATGCTCCTCCTTCTACTCT+TGG | - | chr1.4:60497050-60497069 | MS.gene51454:CDS | 45.0% | |
| TATGGCAGAAGCAAGATGTG+AGG | - | chr1.4:60496454-60496473 | MS.gene51454:CDS | 45.0% | |
| TGGTGATTCTACAGTGAGGA+AGG | - | chr1.4:60496578-60496597 | MS.gene51454:CDS | 45.0% | |
| TTTCCTTGTGGAACAAGTCC+TGG | - | chr1.4:60496831-60496850 | MS.gene51454:CDS | 45.0% | |
| ! | AGGTTGTTGAGTTGTTGGCT+AGG | - | chr1.4:60496517-60496536 | MS.gene51454:CDS | 45.0% |
| ! | CCACATTCATTTTGCACGAG+TGG | + | chr1.4:60496636-60496655 | None:intergenic | 45.0% |
| ! | CTGGTGTGGTTTCTAGGTTA+GGG | - | chr1.4:60496172-60496191 | MS.gene51454:CDS | 45.0% |
| ! | GAGAGGAATTTTGAGCAACG+CGG | - | chr1.4:60497344-60497363 | MS.gene51454:CDS | 45.0% |
| !! | CTCAGAGGGTGTTAGGAATT+TGG | - | chr1.4:60496080-60496099 | MS.gene51454:CDS | 45.0% |
| !! | TCTTGAACTCAGAGGGTGTT+AGG | - | chr1.4:60496073-60496092 | MS.gene51454:CDS | 45.0% |
| !! | TGCAAGAGGGGCATCATATA+TGG | + | chr1.4:60497246-60497265 | None:intergenic | 45.0% |
| AGCAACGCGGAATAGTTAGC+AGG | - | chr1.4:60497357-60497376 | MS.gene51454:CDS | 50.0% | |
| CAGAATGGGGAGAGTAGAAG+AGG | - | chr1.4:60496414-60496433 | MS.gene51454:CDS | 50.0% | |
| CATCCTCCAAGAGTAGAAGG+AGG | + | chr1.4:60497059-60497078 | None:intergenic | 50.0% | |
| CCTTCCAGTCATGTGCAAGA+GGG | + | chr1.4:60497259-60497278 | None:intergenic | 50.0% | |
| CGACTCTTGACGGGATACTT+CGG | - | chr1.4:60497279-60497298 | MS.gene51454:CDS | 50.0% | |
| CTCTTCTACTCTCCCCATTC+TGG | + | chr1.4:60496416-60496435 | None:intergenic | 50.0% | |
| CTTCCAGTCATGTGCAAGAG+GGG | + | chr1.4:60497258-60497277 | None:intergenic | 50.0% | |
| GAGGAATTGAACCGTGTTGC+TGG | - | chr1.4:60496153-60496172 | MS.gene51454:CDS | 50.0% | |
| GCAAGATGTGAGGCAGCTTA+AGG | - | chr1.4:60496464-60496483 | MS.gene51454:CDS | 50.0% | |
| GCACATCCTCCAAGAGTAGA+AGG | + | chr1.4:60497062-60497081 | None:intergenic | 50.0% | |
| GGTTTGAGCAGAGGCTTGTA+TGG | - | chr1.4:60496436-60496455 | MS.gene51454:CDS | 50.0% | |
| GTAGAAGAGGGTTTGAGCAG+AGG | - | chr1.4:60496427-60496446 | MS.gene51454:CDS | 50.0% | |
| GTTCTGTGCCTGCTTTGCAA+GGG | - | chr1.4:60496202-60496221 | MS.gene51454:CDS | 50.0% | |
| TGATGTTGCTATCGACCGTG+AGG | - | chr1.4:60496914-60496933 | MS.gene51454:CDS | 50.0% | |
| TGCTCAAACCCTTGCAAAGC+AGG | + | chr1.4:60496213-60496232 | None:intergenic | 50.0% | |
| TGTTCTGTGCCTGCTTTGCA+AGG | - | chr1.4:60496201-60496220 | MS.gene51454:CDS | 50.0% | |
| ! | ATTGAACCGTGTTGCTGGTG+TGG | - | chr1.4:60496158-60496177 | MS.gene51454:CDS | 50.0% |
| ! | CGCAACTGTATTGGTCCTCA+CGG | + | chr1.4:60496932-60496951 | None:intergenic | 50.0% |
| ! | CTTCCAGGACTTGTTCCACA+AGG | + | chr1.4:60496837-60496856 | None:intergenic | 50.0% |
| ! | GCTGGTGTGGTTTCTAGGTT+AGG | - | chr1.4:60496171-60496190 | MS.gene51454:CDS | 50.0% |
| ! | GTGTTGCTGGTGTGGTTTCT+AGG | - | chr1.4:60496166-60496185 | MS.gene51454:CDS | 50.0% |
| ACAGTGAGGAAGGATGGCCT+TGG | - | chr1.4:60496588-60496607 | MS.gene51454:CDS | 55.0% | |
| ACTGGAAGGCGACTCTTGAC+GGG | - | chr1.4:60497270-60497289 | MS.gene51454:CDS | 55.0% | |
| ATGCCCCTCTTGCACATGAC+TGG | - | chr1.4:60497252-60497271 | MS.gene51454:CDS | 55.0% | |
| CAGTGAGGAAGGATGGCCTT+GGG | - | chr1.4:60496589-60496608 | MS.gene51454:CDS | 55.0% | |
| CCCTCTTGCACATGACTGGA+AGG | - | chr1.4:60497256-60497275 | MS.gene51454:CDS | 55.0% | |
| CTCTTGACGGGATACTTCGG+TGG | - | chr1.4:60497282-60497301 | MS.gene51454:CDS | 55.0% | |
| GACTGGAAGGCGACTCTTGA+CGG | - | chr1.4:60497269-60497288 | MS.gene51454:CDS | 55.0% | |
| GCCTTCCAGTCATGTGCAAG+AGG | + | chr1.4:60497260-60497279 | None:intergenic | 55.0% | |
| GCTCCTCCTTCTACTCTTGG+AGG | - | chr1.4:60497053-60497072 | MS.gene51454:CDS | 55.0% | |
| TGTTCGACGTGAGAAGCTCG+AGG | - | chr1.4:60496134-60496153 | MS.gene51454:CDS | 55.0% | |
| ! | AGGAAGGATGGCCTTGGGAT+TGG | - | chr1.4:60496594-60496613 | MS.gene51454:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 60495838 | 60497580 | 60495838 | ID=MS.gene51454 |
| chr1.4 | mRNA | 60495838 | 60497580 | 60495838 | ID=MS.gene51454.t1;Parent=MS.gene51454 |
| chr1.4 | exon | 60495838 | 60497580 | 60495838 | ID=MS.gene51454.t1.exon1;Parent=MS.gene51454.t1 |
| chr1.4 | CDS | 60495838 | 60497580 | 60495838 | ID=cds.MS.gene51454.t1;Parent=MS.gene51454.t1 |
| Gene Sequence |
| Protein sequence |
