Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060512.t1 | AET01997.2 | 95.1 | 142 | 7 | 0 | 1 | 142 | 1 | 142 | 1.30E-69 | 272.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060512.t1 | P40934 | 55.1 | 136 | 58 | 2 | 1 | 136 | 1 | 133 | 9.8e-39 | 161.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060512.t1 | G7LAT8 | 95.1 | 142 | 7 | 0 | 1 | 142 | 1 | 142 | 9.0e-70 | 272.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene060512 | 0.815225 | 1.03E-51 | -1.69E-46 |
| MS.gene04920 | MS.gene060512 | 0.815281 | 1.00E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene060512 | 0.813231 | 2.84E-51 | -1.69E-46 |
| MS.gene05985 | MS.gene060512 | -0.820327 | 7.27E-53 | -1.69E-46 |
| MS.gene059901 | MS.gene060512 | -0.840805 | 6.97E-58 | -1.69E-46 |
| MS.gene060512 | MS.gene061100 | 0.82006 | 8.37E-53 | -1.69E-46 |
| MS.gene060512 | MS.gene061707 | 0.820614 | 6.25E-53 | -1.69E-46 |
| MS.gene060512 | MS.gene062288 | 0.808695 | 2.73E-50 | -1.69E-46 |
| MS.gene060512 | MS.gene064838 | -0.817095 | 3.94E-52 | -1.69E-46 |
| MS.gene060512 | MS.gene065510 | 0.827613 | 1.42E-54 | -1.69E-46 |
| MS.gene060512 | MS.gene067697 | 0.802331 | 5.90E-49 | -1.69E-46 |
| MS.gene060512 | MS.gene070029 | 0.802982 | 4.33E-49 | -1.69E-46 |
| MS.gene060512 | MS.gene25991 | 0.806308 | 8.76E-50 | -1.69E-46 |
| MS.gene060512 | MS.gene28918 | 0.808156 | 3.56E-50 | -1.69E-46 |
| MS.gene060512 | MS.gene32182 | 0.812491 | 4.13E-51 | -1.69E-46 |
| MS.gene060512 | MS.gene32965 | 0.810177 | 1.31E-50 | -1.69E-46 |
| MS.gene060512 | MS.gene33159 | 0.800754 | 1.24E-48 | -1.69E-46 |
| MS.gene060512 | MS.gene33650 | 0.805888 | 1.07E-49 | -1.69E-46 |
| MS.gene060512 | MS.gene34508 | 0.813638 | 2.31E-51 | -1.69E-46 |
| MS.gene060512 | MS.gene34950 | 0.803028 | 4.24E-49 | -1.69E-46 |
| MS.gene060512 | MS.gene37090 | 0.807589 | 4.70E-50 | -1.69E-46 |
| MS.gene060512 | MS.gene39406 | 0.805831 | 1.10E-49 | -1.69E-46 |
| MS.gene060512 | MS.gene39835 | -0.802639 | 5.10E-49 | -1.69E-46 |
| MS.gene060512 | MS.gene47276 | 0.800461 | 1.43E-48 | -1.69E-46 |
| MS.gene060512 | MS.gene48037 | 0.800091 | 1.70E-48 | -1.69E-46 |
| MS.gene060512 | MS.gene50394 | 0.801122 | 1.04E-48 | -1.69E-46 |
| MS.gene060512 | MS.gene51454 | 0.800839 | 1.19E-48 | -1.69E-46 |
| MS.gene060512 | MS.gene52122 | 0.81183 | 5.75E-51 | -1.69E-46 |
| MS.gene060512 | MS.gene52849 | 0.816651 | 4.95E-52 | -1.69E-46 |
| MS.gene060512 | MS.gene57343 | 0.806858 | 6.71E-50 | -1.69E-46 |
| MS.gene060512 | MS.gene58719 | 0.817837 | 2.68E-52 | -1.69E-46 |
| MS.gene060512 | MS.gene61184 | 0.83786 | 4.05E-57 | -1.69E-46 |
| MS.gene060512 | MS.gene62676 | 0.805576 | 1.25E-49 | -1.69E-46 |
| MS.gene060512 | MS.gene62677 | 0.835752 | 1.40E-56 | -1.69E-46 |
| MS.gene060512 | MS.gene62926 | 0.804176 | 2.45E-49 | -1.69E-46 |
| MS.gene060512 | MS.gene63430 | 0.824859 | 6.42E-54 | -1.69E-46 |
| MS.gene060512 | MS.gene68198 | 0.820793 | 5.68E-53 | -1.69E-46 |
| MS.gene060512 | MS.gene68654 | 0.800714 | 1.27E-48 | -1.69E-46 |
| MS.gene060512 | MS.gene68663 | 0.800779 | 1.23E-48 | -1.69E-46 |
| MS.gene060512 | MS.gene68725 | -0.829744 | 4.34E-55 | -1.69E-46 |
| MS.gene060512 | MS.gene70656 | 0.814583 | 1.43E-51 | -1.69E-46 |
| MS.gene060512 | MS.gene71891 | -0.805763 | 1.14E-49 | -1.69E-46 |
| MS.gene060512 | MS.gene72369 | -0.803596 | 3.23E-49 | -1.69E-46 |
| MS.gene060512 | MS.gene74537 | 0.829017 | 6.51E-55 | -1.69E-46 |
| MS.gene060512 | MS.gene76244 | 0.810532 | 1.10E-50 | -1.69E-46 |
| MS.gene060512 | MS.gene84179 | 0.819421 | 1.17E-52 | -1.69E-46 |
| MS.gene060512 | MS.gene84834 | 0.877666 | 5.23E-69 | -1.69E-46 |
| MS.gene060512 | MS.gene90786 | -0.844735 | 6.29E-59 | -1.69E-46 |
| MS.gene060512 | MS.gene92076 | 0.802557 | 5.30E-49 | -1.69E-46 |
| MS.gene060512 | MS.gene95614 | 0.815212 | 1.04E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060512.t1 | MTR_8g027080 | 95.070 | 142 | 7 | 0 | 1 | 142 | 1 | 142 | 1.10e-99 | 282 |
| MS.gene060512.t1 | MTR_8g027080 | 95.070 | 142 | 7 | 0 | 1 | 142 | 1 | 142 | 1.16e-99 | 283 |
| MS.gene060512.t1 | MTR_8g027080 | 95.070 | 142 | 7 | 0 | 1 | 142 | 1 | 142 | 1.30e-99 | 282 |
| MS.gene060512.t1 | MTR_8g027080 | 95.070 | 142 | 7 | 0 | 1 | 142 | 1 | 142 | 1.33e-99 | 282 |
| MS.gene060512.t1 | MTR_3g092095 | 57.353 | 136 | 55 | 1 | 1 | 136 | 1 | 133 | 8.17e-55 | 168 |
| MS.gene060512.t1 | MTR_7g117990 | 59.286 | 140 | 56 | 1 | 3 | 142 | 4 | 142 | 4.59e-53 | 164 |
| MS.gene060512.t1 | MTR_4g022350 | 49.275 | 138 | 67 | 2 | 1 | 138 | 14 | 148 | 3.57e-49 | 155 |
| MS.gene060512.t1 | MTR_4g022350 | 49.275 | 138 | 67 | 2 | 1 | 138 | 1 | 135 | 4.55e-49 | 154 |
| MS.gene060512.t1 | MTR_3g092095 | 58.000 | 100 | 39 | 1 | 37 | 136 | 1 | 97 | 6.98e-37 | 122 |
| MS.gene060512.t1 | MTR_5g045630 | 60.000 | 90 | 35 | 1 | 1 | 90 | 1 | 89 | 3.25e-35 | 119 |
| MS.gene060512.t1 | MTR_3g102780 | 32.824 | 131 | 77 | 2 | 12 | 136 | 90 | 215 | 6.20e-24 | 92.8 |
| MS.gene060512.t1 | MTR_5g045630 | 63.492 | 63 | 22 | 1 | 29 | 91 | 15 | 76 | 7.97e-24 | 89.4 |
| MS.gene060512.t1 | MTR_3g073180 | 33.333 | 135 | 69 | 2 | 1 | 115 | 521 | 654 | 1.32e-18 | 81.3 |
| MS.gene060512.t1 | MTR_3g073150 | 48.684 | 76 | 38 | 1 | 5 | 80 | 516 | 590 | 6.57e-18 | 79.3 |
| MS.gene060512.t1 | MTR_6g088690 | 42.857 | 70 | 39 | 1 | 12 | 81 | 50 | 118 | 2.94e-17 | 72.8 |
| MS.gene060512.t1 | MTR_5g059820 | 43.902 | 82 | 45 | 1 | 1 | 82 | 513 | 593 | 5.16e-17 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060512.t1 | AT5G53560 | 53.676 | 136 | 60 | 2 | 1 | 136 | 1 | 133 | 1.72e-53 | 165 |
| MS.gene060512.t1 | AT5G48810 | 52.593 | 135 | 63 | 1 | 1 | 135 | 1 | 134 | 3.71e-51 | 159 |
| MS.gene060512.t1 | AT2G32720 | 54.074 | 135 | 59 | 2 | 1 | 135 | 1 | 132 | 2.25e-50 | 157 |
| MS.gene060512.t1 | AT2G32720 | 55.263 | 114 | 48 | 2 | 22 | 135 | 22 | 132 | 2.06e-38 | 127 |
| MS.gene060512.t1 | AT2G46650 | 50.000 | 130 | 62 | 2 | 8 | 136 | 5 | 132 | 1.22e-35 | 120 |
| MS.gene060512.t1 | AT1G26340 | 45.192 | 104 | 51 | 1 | 1 | 98 | 1 | 104 | 1.17e-32 | 112 |
| MS.gene060512.t1 | AT1G60660 | 46.377 | 69 | 36 | 1 | 12 | 80 | 53 | 120 | 1.06e-18 | 76.6 |
| MS.gene060512.t1 | AT1G37130 | 43.750 | 80 | 44 | 1 | 1 | 80 | 538 | 616 | 1.91e-18 | 80.9 |
| MS.gene060512.t1 | AT1G77760 | 42.500 | 80 | 45 | 1 | 1 | 80 | 541 | 619 | 4.74e-17 | 77.0 |
| MS.gene060512.t1 | AT2G46210 | 39.474 | 76 | 45 | 1 | 3 | 78 | 5 | 79 | 9.09e-12 | 61.6 |
Find 30 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGGTGCCATTGCTGATAT+TGG | 0.277424 | 8.1:+75314132 | MS.gene060512:CDS |
| GCATTTGCTCTTCAGTACTA+TGG | 0.296249 | 8.1:+75314160 | MS.gene060512:CDS |
| ATTCATTACTTAAGATTCAT+TGG | 0.334499 | 8.1:-75314197 | None:intergenic |
| AGAAGATTGATTGCTGCTTA+TGG | 0.334533 | 8.1:-75314083 | None:intergenic |
| ATCAGAGACTTTAACCTTTG+AGG | 0.335279 | 8.1:+75309712 | MS.gene060512:CDS |
| GACTTTAACCTTTGAGGATG+TGG | 0.376866 | 8.1:+75309718 | MS.gene060512:CDS |
| ATAAGCAGCAATCAATCTTC+TGG | 0.400727 | 8.1:+75314085 | MS.gene060512:CDS |
| TGATGGAAAAGTACTATGTC+GGG | 0.401001 | 8.1:+75313993 | MS.gene060512:CDS |
| CTTATGGTAGATGCTTGAAT+TGG | 0.417094 | 8.1:-75314067 | None:intergenic |
| GATGCTTGAATTGGTGCTGT+TGG | 0.425349 | 8.1:-75314058 | None:intergenic |
| CTGGATCATAGTCAACAAAA+AGG | 0.426357 | 8.1:+75309766 | MS.gene060512:CDS |
| GGATTGTTCTTAGCTGCTGC+TGG | 0.435494 | 8.1:-75314037 | None:intergenic |
| CTGGTGCCATTGCTGATATT+GGG | 0.444522 | 8.1:+75314133 | MS.gene060512:CDS |
| GTGGCCAACATCTTCAAAAT+CGG | 0.455103 | 8.1:-75313951 | None:intergenic |
| ACAATAACAAGAACGATTGC+TGG | 0.477730 | 8.1:+75309747 | MS.gene060512:CDS |
| GTTGAAGTTCTTGCAGTACC+TGG | 0.488377 | 8.1:+75314114 | MS.gene060512:CDS |
| GAGGCTTTACTTTCTGCTAC+AGG | 0.508240 | 8.1:+75313460 | MS.gene060512:CDS |
| AGTAAAGCCTCGTCACCTCC+AGG | 0.530291 | 8.1:-75313448 | None:intergenic |
| TGACTCGGCAACAGAGATGA+TGG | 0.533371 | 8.1:+75313976 | MS.gene060512:CDS |
| ATGATGGAAAAGTACTATGT+CGG | 0.538408 | 8.1:+75313992 | MS.gene060512:CDS |
| CCAATATCAGCAATGGCACC+AGG | 0.539402 | 8.1:-75314132 | None:intergenic |
| AGCTGCTGCTGGAAGAGTGT+TGG | 0.552849 | 8.1:-75314026 | None:intergenic |
| GTGCTTAGCCACATCCTCAA+AGG | 0.580670 | 8.1:-75309726 | None:intergenic |
| AGATGTTGGCCACAGTGACT+CGG | 0.590642 | 8.1:+75313961 | MS.gene060512:CDS |
| GCAGATCCCAATATCAGCAA+TGG | 0.611023 | 8.1:-75314139 | None:intergenic |
| GCCAACATCTTCAAAATCGG+TGG | 0.624406 | 8.1:-75313948 | None:intergenic |
| TGATCATCCTGGAGGTGACG+AGG | 0.626429 | 8.1:+75313441 | MS.gene060512:CDS |
| GATGGAAAAGTACTATGTCG+GGG | 0.689368 | 8.1:+75313994 | MS.gene060512:CDS |
| TCTCTGTTGCCGAGTCACTG+TGG | 0.717695 | 8.1:-75313970 | None:intergenic |
| GGAAAAGTACTATGTCGGGG+AGG | 0.724893 | 8.1:+75313997 | MS.gene060512:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAAATATATTTTATTTT+GGG | - | chr8.1:75312191-75312210 | None:intergenic | 0.0% |
| !!! | TATTAAAATATATTTTATTT+TGG | - | chr8.1:75312192-75312211 | None:intergenic | 0.0% |
| !! | AACATAAAAAAATTATGTTA+TGG | + | chr8.1:75310097-75310116 | MS.gene060512:intron | 10.0% |
| !! | AAGTAATGAAATTTATATTT+AGG | + | chr8.1:75313167-75313186 | MS.gene060512:intron | 10.0% |
| !! | ATTGAAAAAAAAAAACTAAA+TGG | - | chr8.1:75310329-75310348 | None:intergenic | 10.0% |
| !! | ATTGTAGTTAAAAAAAAATT+GGG | + | chr8.1:75310934-75310953 | MS.gene060512:intron | 10.0% |
| !! | TATTGTAGTTAAAAAAAAAT+TGG | + | chr8.1:75310933-75310952 | MS.gene060512:intron | 10.0% |
| !! | TTGAAAAAAAAAAACTAAAT+GGG | - | chr8.1:75310328-75310347 | None:intergenic | 10.0% |
| !! | AAATGATGAGAAAAAAAAAA+TGG | - | chr8.1:75311171-75311190 | None:intergenic | 15.0% |
| !! | ATCAATAAAACTATAATACT+AGG | + | chr8.1:75311460-75311479 | MS.gene060512:intron | 15.0% |
| !! | TTGTAGTTAAAAAAAAATTG+GGG | + | chr8.1:75310935-75310954 | MS.gene060512:intron | 15.0% |
| !!! | AATATGTTTTGATAATTAGA+CGG | - | chr8.1:75311126-75311145 | None:intergenic | 15.0% |
| !!! | AGAGATTTTAAAAAGTAAAT+AGG | - | chr8.1:75312618-75312637 | None:intergenic | 15.0% |
| !!! | TTTCTGTTTTTTTTCTTTTT+CGG | - | chr8.1:75312037-75312056 | None:intergenic | 15.0% |
| !!! | TTTGTACTTTTATTATTAGT+AGG | + | chr8.1:75313342-75313361 | MS.gene060512:intron | 15.0% |
| !!! | TTTTCTAAATATTAGTATTG+TGG | + | chr8.1:75311505-75311524 | MS.gene060512:intron | 15.0% |
| !! | AAAAAAAAACAGTAGAATTG+TGG | + | chr8.1:75312128-75312147 | MS.gene060512:intron | 20.0% |
| !! | AAAAAAAACAGTAGAATTGT+GGG | + | chr8.1:75312129-75312148 | MS.gene060512:intron | 20.0% |
| !! | AAAAACTAAATGGGAATAAA+AGG | - | chr8.1:75310319-75310338 | None:intergenic | 20.0% |
| !! | AATTTGAAAAGATTTAACCA+GGG | - | chr8.1:75311837-75311856 | None:intergenic | 20.0% |
| !! | ATGAATATGAATATGATTCA+TGG | + | chr8.1:75309971-75309990 | MS.gene060512:intron | 20.0% |
| !! | CACTAAAAGTTAAAAATCAT+TGG | - | chr8.1:75311388-75311407 | None:intergenic | 20.0% |
| !! | CATATTTATACTGTGAAAAT+TGG | + | chr8.1:75311140-75311159 | MS.gene060512:intron | 20.0% |
| !! | GTATTCCTATGTTTATTATA+GGG | - | chr8.1:75313260-75313279 | None:intergenic | 20.0% |
| !! | TAAAAATTGGATAAGTTACA+TGG | + | chr8.1:75311059-75311078 | MS.gene060512:intron | 20.0% |
| !! | TATTTAAACTAGTAAACTCT+TGG | + | chr8.1:75311623-75311642 | MS.gene060512:intron | 20.0% |
| !! | TATTTATTAGTAGCAATGTA+GGG | - | chr8.1:75312783-75312802 | None:intergenic | 20.0% |
| !! | TGTAGTTAAAAAAAAATTGG+GGG | + | chr8.1:75310936-75310955 | MS.gene060512:intron | 20.0% |
| !! | TGTATTCCTATGTTTATTAT+AGG | - | chr8.1:75313261-75313280 | None:intergenic | 20.0% |
| !! | TTAAACTCTATTTATATCAG+TGG | - | chr8.1:75311026-75311045 | None:intergenic | 20.0% |
| !! | TTATTTATTAGTAGCAATGT+AGG | - | chr8.1:75312784-75312803 | None:intergenic | 20.0% |
| !!! | ATTTTTCACATGACTAAAAT+GGG | - | chr8.1:75313547-75313566 | None:intergenic | 20.0% |
| !!! | CTTTCTGTTTTTTTCTTTTT+CGG | + | chr8.1:75312442-75312461 | MS.gene060512:intron | 20.0% |
| !!! | GACATTTTGATTTTTACAAA+TGG | - | chr8.1:75310710-75310729 | None:intergenic | 20.0% |
| !!! | GTTGTTATTTATTATTCTCA+GGG | + | chr8.1:75313719-75313738 | MS.gene060512:intron | 20.0% |
| !!! | TACTTTTTAAAATCTCTTAG+AGG | + | chr8.1:75312621-75312640 | MS.gene060512:intron | 20.0% |
| !!! | TAGATCTTTATTTAAAACCT+TGG | + | chr8.1:75310135-75310154 | MS.gene060512:intron | 20.0% |
| !!! | TTCTGTTTTTTTTCTTTTTC+GGG | - | chr8.1:75312036-75312055 | None:intergenic | 20.0% |
| !!! | TTTATACCAATTGGTTTAAA+AGG | + | chr8.1:75310997-75311016 | MS.gene060512:intron | 20.0% |
| !!! | TTTCTGTTTTTTTCTTTTTC+GGG | + | chr8.1:75312443-75312462 | MS.gene060512:intron | 20.0% |
| !!! | TTTGAATTTGCTGTAAAAAT+TGG | + | chr8.1:75311046-75311065 | MS.gene060512:intron | 20.0% |
| !!! | TTTTAAACTTTCTCGATTTT+GGG | - | chr8.1:75310476-75310495 | None:intergenic | 20.0% |
| !!! | TTTTTAAACTTTCTCGATTT+TGG | - | chr8.1:75310477-75310496 | None:intergenic | 20.0% |
| !!! | TTTTTCAATTTTTTTTGGCT+TGG | + | chr8.1:75310340-75310359 | MS.gene060512:intron | 20.0% |
| ! | AAAAAAAAACAGTAGAACTG+TGG | - | chr8.1:75312357-75312376 | None:intergenic | 25.0% |
| ! | AAAAAAAACAGTAGAACTGT+GGG | - | chr8.1:75312356-75312375 | None:intergenic | 25.0% |
| ! | AACTTGTATTCCATTGTAAT+AGG | + | chr8.1:75313393-75313412 | MS.gene060512:intron | 25.0% |
| ! | AAGAAAAAAACAGAAAGACA+CGG | - | chr8.1:75312439-75312458 | None:intergenic | 25.0% |
| ! | AATACAATCTTTCATATGAG+TGG | + | chr8.1:75312968-75312987 | MS.gene060512:intron | 25.0% |
| ! | ACAATACTAAAGCAAAATGT+TGG | - | chr8.1:75310963-75310982 | None:intergenic | 25.0% |
| ! | ACATCATATACCTATTACAA+TGG | - | chr8.1:75313406-75313425 | None:intergenic | 25.0% |
| ! | ACCACTAATTATTTCGTTTA+AGG | + | chr8.1:75312822-75312841 | MS.gene060512:intron | 25.0% |
| ! | ACTATACACACAATAAAATG+TGG | + | chr8.1:75311563-75311582 | MS.gene060512:intron | 25.0% |
| ! | AGAAAAAAAACAGAAAGACA+CGG | + | chr8.1:75312041-75312060 | MS.gene060512:intron | 25.0% |
| ! | ATGATGCAAAAAAACTGTAA+TGG | - | chr8.1:75310676-75310695 | None:intergenic | 25.0% |
| ! | ATGATTAATCTATTAACAGC+TGG | - | chr8.1:75311747-75311766 | None:intergenic | 25.0% |
| ! | ATTACAATGGAATACAAGTT+AGG | - | chr8.1:75313393-75313412 | None:intergenic | 25.0% |
| ! | GAATATGATTCATGGTATTA+GGG | + | chr8.1:75309979-75309998 | MS.gene060512:intron | 25.0% |
| ! | GAATTTGAAAAGATTTAACC+AGG | - | chr8.1:75311838-75311857 | None:intergenic | 25.0% |
| ! | GTATTTATCATGTTACTGAT+GGG | - | chr8.1:75312953-75312972 | None:intergenic | 25.0% |
| ! | TAAACATTCACTCTCTTATT+GGG | - | chr8.1:75310601-75310620 | None:intergenic | 25.0% |
| ! | TAAATGGGAATAAAAGGTTA+TGG | - | chr8.1:75310313-75310332 | None:intergenic | 25.0% |
| ! | TACTTTAAACAAACGCATTT+CGG | - | chr8.1:75313152-75313171 | None:intergenic | 25.0% |
| ! | TCCTTAAACGAAATAATTAG+TGG | - | chr8.1:75312826-75312845 | None:intergenic | 25.0% |
| ! | TGAATATGATTCATGGTATT+AGG | + | chr8.1:75309978-75309997 | MS.gene060512:intron | 25.0% |
| ! | TGTATTTATCATGTTACTGA+TGG | - | chr8.1:75312954-75312973 | None:intergenic | 25.0% |
| ! | TTAAACATTCACTCTCTTAT+TGG | - | chr8.1:75310602-75310621 | None:intergenic | 25.0% |
| ! | TTAATACTCACTCTCTAATT+GGG | + | chr8.1:75310536-75310555 | MS.gene060512:intron | 25.0% |
| ! | TTAGATGACATAAACTACAT+TGG | + | chr8.1:75313123-75313142 | MS.gene060512:intron | 25.0% |
| ! | TTAGATTTATACAGAAGTGA+AGG | + | chr8.1:75312262-75312281 | MS.gene060512:intron | 25.0% |
| !! | AAAACAAAAATCTGAAGTGA+AGG | - | chr8.1:75312230-75312249 | None:intergenic | 25.0% |
| !! | ATGTAGTCATTCTAATTTGT+AGG | - | chr8.1:75310425-75310444 | None:intergenic | 25.0% |
| !! | CATTTTTCACATGACTAAAA+TGG | - | chr8.1:75313548-75313567 | None:intergenic | 25.0% |
| !! | GCATCTAATTTTATACCAAT+TGG | + | chr8.1:75310988-75311007 | MS.gene060512:intron | 25.0% |
| !! | GGAAATTTATACTCTTTTTG+AGG | - | chr8.1:75310643-75310662 | None:intergenic | 25.0% |
| !! | TTAAATCAATGTGAAGTGTT+GGG | + | chr8.1:75310559-75310578 | MS.gene060512:intron | 25.0% |
| !! | TTATGTTATGGTCTAGATTT+TGG | + | chr8.1:75310109-75310128 | MS.gene060512:intron | 25.0% |
| !! | TTTTGCTTTAGTATTGTATG+TGG | + | chr8.1:75310966-75310985 | MS.gene060512:intron | 25.0% |
| !!! | ACAGTTCTACTGTTTTTTTT+TGG | + | chr8.1:75312356-75312375 | MS.gene060512:intron | 25.0% |
| !!! | ATAAGTTACATGGTTTTAGA+AGG | + | chr8.1:75311069-75311088 | MS.gene060512:intron | 25.0% |
| !!! | ATTTCTCTCTAGGATTAAAA+CGG | - | chr8.1:75313033-75313052 | None:intergenic | 25.0% |
| !!! | ATTTGATCTGTTTTAGTATC+TGG | + | chr8.1:75309862-75309881 | MS.gene060512:intron | 25.0% |
| !!! | CAGTTCTACTGTTTTTTTTT+GGG | + | chr8.1:75312357-75312376 | MS.gene060512:intron | 25.0% |
| !!! | CATTTTAGTCATGTGAAAAA+TGG | + | chr8.1:75313546-75313565 | MS.gene060512:intron | 25.0% |
| !!! | CGTTGTTATTTATTATTCTC+AGG | + | chr8.1:75313718-75313737 | MS.gene060512:intron | 25.0% |
| !!! | TCTACTGTTTTTTTTTCCTT+GGG | - | chr8.1:75312124-75312143 | None:intergenic | 25.0% |
| !!! | TTCTACTGTTTTTTTTTCCT+TGG | - | chr8.1:75312125-75312144 | None:intergenic | 25.0% |
| !!! | TTTGATCTGTTTTAGTATCT+GGG | + | chr8.1:75309863-75309882 | MS.gene060512:intron | 25.0% |
| !!! | TTTTTAAAATCTCTTAGAGG+AGG | + | chr8.1:75312624-75312643 | MS.gene060512:intron | 25.0% |
| !!! | TTTTTCTCATCATTTTGACA+TGG | + | chr8.1:75311176-75311195 | MS.gene060512:intron | 25.0% |
| AAATATCCAACATTCCAACT+TGG | - | chr8.1:75311543-75311562 | None:intergenic | 30.0% | |
| AACACATTCACATGAATGAA+TGG | - | chr8.1:75313294-75313313 | None:intergenic | 30.0% | |
| AACTGTAATGGTTAACATCA+CGG | - | chr8.1:75310664-75310683 | None:intergenic | 30.0% | |
| AATTGCTTAAGAGTGAAGAA+CGG | - | chr8.1:75311339-75311358 | None:intergenic | 30.0% | |
| ACACATTCACATGAATGAAT+GGG | - | chr8.1:75313293-75313312 | None:intergenic | 30.0% | |
| ACATTCAACTAACAATCTTC+TGG | + | chr8.1:75313901-75313920 | MS.gene060512:intron | 30.0% | |
| AGTAGTATGAAATACTTCAG+TGG | - | chr8.1:75312725-75312744 | None:intergenic | 30.0% | |
| GTTAAATCAATGTGAAGTGT+TGG | + | chr8.1:75310558-75310577 | MS.gene060512:intron | 30.0% | |
| GTTAATACTCACTCTCTAAT+TGG | + | chr8.1:75310535-75310554 | MS.gene060512:intron | 30.0% | |
| TAGCACCCTATAATAAACAT+AGG | + | chr8.1:75313252-75313271 | MS.gene060512:intron | 30.0% | |
| TAGCATAAACATTGAATCCA+AGG | - | chr8.1:75310155-75310174 | None:intergenic | 30.0% | |
| TGAGTTGCTGAAAAAAACTA+CGG | - | chr8.1:75313758-75313777 | None:intergenic | 30.0% | |
| TGATCTGTCAATAAGTTGTA+TGG | + | chr8.1:75310212-75310231 | MS.gene060512:intron | 30.0% | |
| ! | ATATGATGTTACCCCATTTT+TGG | + | chr8.1:75313417-75313436 | MS.gene060512:CDS | 30.0% |
| ! | CTGAAGTATTTCATACTACT+CGG | + | chr8.1:75312725-75312744 | MS.gene060512:intron | 30.0% |
| ! | GCTGATTATGAAGATTGTTT+TGG | - | chr8.1:75311909-75311928 | None:intergenic | 30.0% |
| ! | TCATGTCTTTAAAGAAGGTA+GGG | + | chr8.1:75313660-75313679 | MS.gene060512:intron | 30.0% |
| ! | TCATGTTTTGTCCAGTATTA+TGG | + | chr8.1:75311763-75311782 | MS.gene060512:intron | 30.0% |
| ! | TCTAATTTGTAGGAAGATCA+AGG | - | chr8.1:75310415-75310434 | None:intergenic | 30.0% |
| ! | TGGAAACCTTTTAAACCAAT+TGG | - | chr8.1:75311006-75311025 | None:intergenic | 30.0% |
| ! | TTTTCTTGCTCTCTTCTTAT+AGG | - | chr8.1:75313850-75313869 | None:intergenic | 30.0% |
| !! | ATGATGGAAAAGTACTATGT+CGG | + | chr8.1:75313992-75314011 | MS.gene060512:CDS | 30.0% |
| !! | GTCTTGGTTTATTTTTCTCA+GGG | - | chr8.1:75313611-75313630 | None:intergenic | 30.0% |
| !! | TGTCTTGGTTTATTTTTCTC+AGG | - | chr8.1:75313612-75313631 | None:intergenic | 30.0% |
| !!! | AGTTGTATGGTTTTGAATTG+AGG | + | chr8.1:75310225-75310244 | MS.gene060512:intron | 30.0% |
| !!! | GGTATTAGGGTTTTAAATTG+CGG | + | chr8.1:75309992-75310011 | MS.gene060512:intron | 30.0% |
| AAACAAAACGATCTAACCCA+AGG | + | chr8.1:75312105-75312124 | MS.gene060512:intron | 35.0% | |
| ACAATAACAAGAACGATTGC+TGG | + | chr8.1:75309747-75309766 | MS.gene060512:CDS | 35.0% | |
| ACGAGTTCATATTTCTCTCT+AGG | - | chr8.1:75313043-75313062 | None:intergenic | 35.0% | |
| ACTAGTAAACTCTTGGTACT+TGG | + | chr8.1:75311630-75311649 | MS.gene060512:intron | 35.0% | |
| ACTGCTATGTAGGATTTGAA+AGG | - | chr8.1:75312185-75312166 | None:intergenic | 35.0% | |
| AGATTAGATTCTCCAAAGCA+AGG | - | chr8.1:75311702-75311721 | None:intergenic | 35.0% | |
| AGATTCAACTTGGTAGAGAT+AGG | - | chr8.1:75311289-75311308 | None:intergenic | 35.0% | |
| AGGATGATCATCCAAAAATG+GGG | - | chr8.1:75313431-75313450 | None:intergenic | 35.0% | |
| ATAAGCAGCAATCAATCTTC+TGG | + | chr8.1:75314085-75314104 | MS.gene060512:CDS | 35.0% | |
| ATCACATTCTCAGCTTCTTA+TGG | + | chr8.1:75311232-75311251 | MS.gene060512:intron | 35.0% | |
| ATCAGAGACTTTAACCTTTG+AGG | + | chr8.1:75309712-75309731 | MS.gene060512:CDS | 35.0% | |
| CAGGATGATCATCCAAAAAT+GGG | - | chr8.1:75313432-75313451 | None:intergenic | 35.0% | |
| CATTAGATCATGTCGTGATA+TGG | - | chr8.1:75310269-75310288 | None:intergenic | 35.0% | |
| CATTGAAGCTAGATTCAACT+TGG | - | chr8.1:75311299-75311318 | None:intergenic | 35.0% | |
| CTGGATCATAGTCAACAAAA+AGG | + | chr8.1:75309766-75309785 | MS.gene060512:CDS | 35.0% | |
| CTTATGGTAGATGCTTGAAT+TGG | - | chr8.1:75314070-75314089 | None:intergenic | 35.0% | |
| GAAGACTTTGCTACTCTAAA+CGG | - | chr8.1:75311809-75311828 | None:intergenic | 35.0% | |
| GACAGATCAAAATACTCTTG+TGG | - | chr8.1:75310201-75310220 | None:intergenic | 35.0% | |
| GAGAAATATGAACTCGTCAT+TGG | + | chr8.1:75313046-75313065 | MS.gene060512:intron | 35.0% | |
| GAGTTGCTGAAAAAAACTAC+GGG | - | chr8.1:75313757-75313776 | None:intergenic | 35.0% | |
| GTGAATGTTTAAGAGAGTCT+TGG | + | chr8.1:75310610-75310629 | MS.gene060512:intron | 35.0% | |
| TATGAAATACTTCAGTGGCT+TGG | - | chr8.1:75312720-75312739 | None:intergenic | 35.0% | |
| TATTTAGGAATTACTTCCCC+AGG | + | chr8.1:75313182-75313201 | MS.gene060512:intron | 35.0% | |
| TCACATTCTCAGCTTCTTAT+GGG | + | chr8.1:75311233-75311252 | MS.gene060512:intron | 35.0% | |
| TGCTATCAAACGATTTAGAG+AGG | + | chr8.1:75311096-75311115 | MS.gene060512:intron | 35.0% | |
| TTAGTGGTAGAACTTCTTAG+TGG | - | chr8.1:75312810-75312829 | None:intergenic | 35.0% | |
| TTGGTTACTTGAGCAAACTT+CGG | + | chr8.1:75313065-75313084 | MS.gene060512:intron | 35.0% | |
| TTTCAAAACGACTGCTATGT+AGG | + | chr8.1:75312156-75312175 | MS.gene060512:intron | 35.0% | |
| TTTCAAAACGACTGCTATGT+AGG | - | chr8.1:75312175-75312156 | None:intergenic | 35.0% | |
| ! | AATCTTCTGGTGTTTTACAC+AGG | + | chr8.1:75313914-75313933 | MS.gene060512:intron | 35.0% |
| ! | AGAAGATTGATTGCTGCTTA+TGG | - | chr8.1:75314086-75314105 | None:intergenic | 35.0% |
| ! | ATCTTCTGGTGTTTTACACA+GGG | + | chr8.1:75313915-75313934 | MS.gene060512:intron | 35.0% |
| ! | CATGTCTTTAAAGAAGGTAG+GGG | + | chr8.1:75313661-75313680 | MS.gene060512:intron | 35.0% |
| ! | CCTTGACAGCAAACTTTTAA+GGG | - | chr8.1:75312689-75312708 | None:intergenic | 35.0% |
| ! | CTACCTTCTTTAAAGACATG+AGG | - | chr8.1:75313661-75313680 | None:intergenic | 35.0% |
| ! | CTATAATACTAGGTCTTGTC+TGG | + | chr8.1:75311470-75311489 | MS.gene060512:intron | 35.0% |
| ! | CTCATGTCTTTAAAGAAGGT+AGG | + | chr8.1:75313659-75313678 | MS.gene060512:intron | 35.0% |
| ! | CTCGTACATATTAAGAGTGT+CGG | - | chr8.1:75310805-75310824 | None:intergenic | 35.0% |
| ! | TCATTACCAAGTTGGAATGT+TGG | + | chr8.1:75311534-75311553 | MS.gene060512:intron | 35.0% |
| ! | TGTATTTTGCACACTTGCAA+AGG | - | chr8.1:75311205-75311224 | None:intergenic | 35.0% |
| ! | TTGCCTCATGTCTTTAAAGA+AGG | + | chr8.1:75313655-75313674 | MS.gene060512:intron | 35.0% |
| !! | CCTTAAAAGTTTGCTGTCAA+GGG | + | chr8.1:75312687-75312706 | MS.gene060512:intron | 35.0% |
| !! | CTTAAAAGTTTGCTGTCAAG+GGG | + | chr8.1:75312688-75312707 | MS.gene060512:intron | 35.0% |
| !! | TATTTCATACTACTCGGTGT+GGG | + | chr8.1:75312731-75312750 | MS.gene060512:intron | 35.0% |
| !! | TGATGGAAAAGTACTATGTC+GGG | + | chr8.1:75313993-75314012 | MS.gene060512:CDS | 35.0% |
| !! | TTAAAAGTTTGCTGTCAAGG+GGG | + | chr8.1:75312689-75312708 | MS.gene060512:intron | 35.0% |
| !!! | CTTTTAGTGCTGTTTTTGTG+TGG | + | chr8.1:75311399-75311418 | MS.gene060512:intron | 35.0% |
| AATTCCCATCATTGCTTTCC+TGG | - | chr8.1:75313203-75313222 | None:intergenic | 40.0% | |
| ACTCTGCAAAAGACACAGTT+TGG | + | chr8.1:75312069-75312088 | MS.gene060512:intron | 40.0% | |
| AGACATGAGGCAAAGTTGTT+CGG | - | chr8.1:75313648-75313667 | None:intergenic | 40.0% | |
| AGCCATGTTCACTGAAGTAA+CGG | + | chr8.1:75311881-75311900 | MS.gene060512:intron | 40.0% | |
| AGTTCCTTACCTCTCATAAC+AGG | - | chr8.1:75310742-75310761 | None:intergenic | 40.0% | |
| ATTCCCATCATTGCTTTCCT+GGG | - | chr8.1:75313202-75313221 | None:intergenic | 40.0% | |
| CACTCTTAATATGTACGAGG+TGG | + | chr8.1:75310806-75310825 | MS.gene060512:intron | 40.0% | |
| CCAGGATGATCATCCAAAAA+TGG | - | chr8.1:75313433-75313452 | None:intergenic | 40.0% | |
| CGACACTCTTAATATGTACG+AGG | + | chr8.1:75310803-75310822 | MS.gene060512:intron | 40.0% | |
| CTTCTTATAGGCTATGACAG+AGG | - | chr8.1:75313838-75313857 | None:intergenic | 40.0% | |
| GACTTTGGACACCATAATAC+TGG | - | chr8.1:75311777-75311796 | None:intergenic | 40.0% | |
| GCATTTGCTCTTCAGTACTA+TGG | + | chr8.1:75314160-75314179 | MS.gene060512:CDS | 40.0% | |
| GGACAATTTGACAAATCACG+AGG | - | chr8.1:75311367-75311386 | None:intergenic | 40.0% | |
| GGTGCTAGAAAATTCACTCT+CGG | - | chr8.1:75313239-75313258 | None:intergenic | 40.0% | |
| GTGCTAGAAAATTCACTCTC+GGG | - | chr8.1:75313238-75313257 | None:intergenic | 40.0% | |
| GTGGCCAACATCTTCAAAAT+CGG | - | chr8.1:75313954-75313973 | None:intergenic | 40.0% | |
| GTTCCTTACCTCTCATAACA+GGG | - | chr8.1:75310741-75310760 | None:intergenic | 40.0% | |
| TAATATGTACGAGGTGGTGT+TGG | + | chr8.1:75310812-75310831 | MS.gene060512:intron | 40.0% | |
| TAGTAGCAATGTAGGGACTT+GGG | - | chr8.1:75312776-75312795 | None:intergenic | 40.0% | |
| TATTAACCCCCTGTTATGAG+AGG | + | chr8.1:75310730-75310749 | MS.gene060512:intron | 40.0% | |
| TGTAATTTAGTCTGAGCACC+TGG | + | chr8.1:75312651-75312670 | MS.gene060512:intron | 40.0% | |
| TTAGTAGCAATGTAGGGACT+TGG | - | chr8.1:75312777-75312796 | None:intergenic | 40.0% | |
| TTCCGTTACTTCAGTGAACA+TGG | - | chr8.1:75311886-75311905 | None:intergenic | 40.0% | |
| TTCCTTACCTCTCATAACAG+GGG | - | chr8.1:75310740-75310759 | None:intergenic | 40.0% | |
| TTCGGACAGGTTATGATATC+TGG | + | chr8.1:75313083-75313102 | MS.gene060512:intron | 40.0% | |
| ! | CAAAATACTCTTGTGGACTG+TGG | - | chr8.1:75310194-75310213 | None:intergenic | 40.0% |
| ! | CCCTTGACAGCAAACTTTTA+AGG | - | chr8.1:75312690-75312709 | None:intergenic | 40.0% |
| ! | CCTCAATTGTTGTCGTTTCA+CGG | + | chr8.1:75310067-75310086 | MS.gene060512:intron | 40.0% |
| ! | GACTTTAACCTTTGAGGATG+TGG | + | chr8.1:75309718-75309737 | MS.gene060512:CDS | 40.0% |
| ! | GTATTTCATACTACTCGGTG+TGG | + | chr8.1:75312730-75312749 | MS.gene060512:intron | 40.0% |
| ! | GTATTTGGAAGGTGCACATT+TGG | - | chr8.1:75312887-75312906 | None:intergenic | 40.0% |
| ! | TTCGTTTAAGGACTAGCATC+AGG | + | chr8.1:75312834-75312853 | MS.gene060512:intron | 40.0% |
| ! | TTTTTGGATGATCATCCTGG+AGG | + | chr8.1:75313433-75313452 | MS.gene060512:CDS | 40.0% |
| !! | ATGAGAAGAACTCTGAAGCA+CGG | - | chr8.1:75312540-75312559 | None:intergenic | 40.0% |
| !! | CCATTTTTGGATGATCATCC+TGG | + | chr8.1:75313430-75313449 | MS.gene060512:CDS | 40.0% |
| !! | CCCTTAAAAGTTTGCTGTCA+AGG | + | chr8.1:75312686-75312705 | MS.gene060512:intron | 40.0% |
| !! | GAAGTGTTGGGACATACATT+GGG | + | chr8.1:75310571-75310590 | MS.gene060512:intron | 40.0% |
| !! | GACAGCAAACTTTTAAGGGA+AGG | - | chr8.1:75312685-75312704 | None:intergenic | 40.0% |
| !! | GATGGAAAAGTACTATGTCG+GGG | + | chr8.1:75313994-75314013 | MS.gene060512:CDS | 40.0% |
| !! | TGAAGTGTTGGGACATACAT+TGG | + | chr8.1:75310570-75310589 | MS.gene060512:intron | 40.0% |
| !! | TTGAGTTGACAACCTTGCTT+TGG | + | chr8.1:75311687-75311706 | MS.gene060512:intron | 40.0% |
| !!! | ACCACCGATTTTGAAGATGT+TGG | + | chr8.1:75313947-75313966 | MS.gene060512:CDS | 40.0% |
| !!! | GTGAGGATAATGGGAGTTTT+AGG | + | chr8.1:75310902-75310921 | MS.gene060512:intron | 40.0% |
| !!! | TAATGGGAGTTTTAGGCACA+AGG | + | chr8.1:75310909-75310928 | MS.gene060512:intron | 40.0% |
| AAAACAGAAAGACACGGCAG+AGG | - | chr8.1:75312066-75312047 | None:intergenic | 45.0% | |
| AAACGGTGTGTATGCGACTT+TGG | - | chr8.1:75311792-75311811 | None:intergenic | 45.0% | |
| AAAGACACAGTTTGGCGACA+CGG | + | chr8.1:75312077-75312096 | MS.gene060512:intron | 45.0% | |
| AACCAGCCAATCCACGTATT+TGG | - | chr8.1:75312902-75312921 | None:intergenic | 45.0% | |
| ACGCAACACGCTTAATGCTA+AGG | - | chr8.1:75310779-75310798 | None:intergenic | 45.0% | |
| AGCAAAGTCTTCGATATCCC+TGG | + | chr8.1:75311817-75311836 | MS.gene060512:intron | 45.0% | |
| AGCCAATCCACGTATTTGGA+AGG | - | chr8.1:75312898-75312917 | None:intergenic | 45.0% | |
| AGGTAAGGAACTATGACGCA+CGG | + | chr8.1:75310750-75310769 | MS.gene060512:intron | 45.0% | |
| ATGTGCACCTTCCAAATACG+TGG | + | chr8.1:75312888-75312907 | MS.gene060512:intron | 45.0% | |
| CACCTTCCAAATACGTGGAT+TGG | + | chr8.1:75312893-75312912 | MS.gene060512:intron | 45.0% | |
| CCGTGAAACGACAACAATTG+AGG | - | chr8.1:75310070-75310089 | None:intergenic | 45.0% | |
| GACAACAATTGAGGCCACAT+CGG | - | chr8.1:75310061-75310080 | None:intergenic | 45.0% | |
| GACATGAGGCAAAGTTGTTC+GGG | - | chr8.1:75313647-75313666 | None:intergenic | 45.0% | |
| GAGGCTTTACTTTCTGCTAC+AGG | + | chr8.1:75313460-75313479 | MS.gene060512:CDS | 45.0% | |
| GCAGATCCCAATATCAGCAA+TGG | - | chr8.1:75314142-75314161 | None:intergenic | 45.0% | |
| GCCAACATCTTCAAAATCGG+TGG | - | chr8.1:75313951-75313970 | None:intergenic | 45.0% | |
| GCTTGACAGGTGAGGATAAT+GGG | + | chr8.1:75310893-75310912 | MS.gene060512:intron | 45.0% | |
| GGGTAGGAACAAAGTTGTCT+TGG | - | chr8.1:75313627-75313646 | None:intergenic | 45.0% | |
| GTTGAAGTTCTTGCAGTACC+TGG | + | chr8.1:75314114-75314133 | MS.gene060512:CDS | 45.0% | |
| TACTTGAGCAAACTTCGGAC+AGG | + | chr8.1:75313070-75313089 | MS.gene060512:intron | 45.0% | |
| TCCTTACCTCTCATAACAGG+GGG | - | chr8.1:75310739-75310758 | None:intergenic | 45.0% | |
| TCTCAGCTTCTTATGGGAGA+TGG | + | chr8.1:75311239-75311258 | MS.gene060512:intron | 45.0% | |
| TGAGGTCGCAGTAATGATTG+TGG | + | chr8.1:75310243-75310262 | MS.gene060512:intron | 45.0% | |
| TGCTTGACAGGTGAGGATAA+TGG | + | chr8.1:75310892-75310911 | MS.gene060512:intron | 45.0% | |
| TTATCCTCACCTGTCAAGCA+CGG | - | chr8.1:75310892-75310911 | None:intergenic | 45.0% | |
| TTCCCATCATTGCTTTCCTG+GGG | - | chr8.1:75313201-75313220 | None:intergenic | 45.0% | |
| TTCCCCAGGAAAGCAATGAT+GGG | + | chr8.1:75313196-75313215 | MS.gene060512:intron | 45.0% | |
| ! | ATACTAGGTCTTGTCTGGTG+TGG | + | chr8.1:75311475-75311494 | MS.gene060512:intron | 45.0% |
| ! | GGCTTGCTTCATTACCAAGT+TGG | + | chr8.1:75311526-75311545 | MS.gene060512:intron | 45.0% |
| ! | TCTGGTGTTTTACACAGGGA+AGG | + | chr8.1:75313919-75313938 | MS.gene060512:intron | 45.0% |
| !! | CTGGTGCCATTGCTGATATT+GGG | + | chr8.1:75314133-75314152 | MS.gene060512:CDS | 45.0% |
| !! | GATGCTTGAATTGGTGCTGT+TGG | - | chr8.1:75314061-75314080 | None:intergenic | 45.0% |
| !! | TTCCAAATACGTGGATTGGC+TGG | + | chr8.1:75312897-75312916 | MS.gene060512:intron | 45.0% |
| !! | TTGGTACTTGGTAGTGTCTG+CGG | + | chr8.1:75311642-75311661 | MS.gene060512:intron | 45.0% |
| !!! | CTTTTTATATTAAATATATT+TGG | + | chr8.1:75312293-75312312 | MS.gene060512:intron | 5.0% |
| !!! | TTTTTTTTTTCAATTTTTTT+TGG | + | chr8.1:75310335-75310354 | MS.gene060512:intron | 5.0% |
| AAGGTGCACATTTGGCGACA+TGG | - | chr8.1:75312879-75312898 | None:intergenic | 50.0% | |
| ACCCCCTGTTATGAGAGGTA+AGG | + | chr8.1:75310735-75310754 | MS.gene060512:intron | 50.0% | |
| AGATGTTGGCCACAGTGACT+CGG | + | chr8.1:75313961-75313980 | MS.gene060512:CDS | 50.0% | |
| AGGTGCACATTTGGCGACAT+GGG | - | chr8.1:75312878-75312897 | None:intergenic | 50.0% | |
| CAGTGAACATGGCTTCTTGC+AGG | - | chr8.1:75311875-75311894 | None:intergenic | 50.0% | |
| CCAATATCAGCAATGGCACC+AGG | - | chr8.1:75314135-75314154 | None:intergenic | 50.0% | |
| CTTCCCCAGGAAAGCAATGA+TGG | + | chr8.1:75313195-75313214 | MS.gene060512:intron | 50.0% | |
| GACCAACAGATCTGCCTCTT+CGG | + | chr8.1:75312926-75312945 | MS.gene060512:intron | 50.0% | |
| GGAATCCGACACAACAGACA+CGG | - | chr8.1:75310871-75310890 | None:intergenic | 50.0% | |
| GGATTGTTCTTAGCTGCTGC+TGG | - | chr8.1:75314040-75314059 | None:intergenic | 50.0% | |
| GTGCTTAGCCACATCCTCAA+AGG | - | chr8.1:75309729-75309748 | None:intergenic | 50.0% | |
| TCACATCACGAGCGATCTGA+TGG | + | chr8.1:75310033-75310052 | MS.gene060512:intron | 50.0% | |
| TGAAGCACAGACACTGCTGT+TGG | + | chr8.1:75311941-75311960 | MS.gene060512:intron | 50.0% | |
| TGAGGCAAAGTTGTTCGGGT+AGG | - | chr8.1:75313643-75313662 | None:intergenic | 50.0% | |
| TGCGGTCTCAGTAACGATTG+TGG | + | chr8.1:75310010-75310029 | MS.gene060512:intron | 50.0% | |
| TGTCTCCGTGTCTGTTGTGT+CGG | + | chr8.1:75310863-75310882 | MS.gene060512:intron | 50.0% | |
| TGTGGGACTTTGGCACATCA+TGG | + | chr8.1:75312748-75312767 | MS.gene060512:intron | 50.0% | |
| TGTTACTGATGGGACCGAAG+AGG | - | chr8.1:75312943-75312962 | None:intergenic | 50.0% | |
| TTAGTCTGAGCACCTGGAGA+GGG | + | chr8.1:75312657-75312676 | MS.gene060512:intron | 50.0% | |
| TTTAGTCTGAGCACCTGGAG+AGG | + | chr8.1:75312656-75312675 | MS.gene060512:intron | 50.0% | |
| ! | TGACTCGGCAACAGAGATGA+TGG | + | chr8.1:75313976-75313995 | MS.gene060512:CDS | 50.0% |
| !! | AAAGACTCGGTTTGGCGACA+CGG | - | chr8.1:75312404-75312423 | None:intergenic | 50.0% |
| !! | AGAGTGAAGAACGGTGTCAC+TGG | - | chr8.1:75311330-75311349 | None:intergenic | 50.0% |
| !! | CCTGGTGCCATTGCTGATAT+TGG | + | chr8.1:75314132-75314151 | MS.gene060512:CDS | 50.0% |
| !! | GAGTGAAGAACGGTGTCACT+GGG | - | chr8.1:75311329-75311348 | None:intergenic | 50.0% |
| !! | GGAAAAGTACTATGTCGGGG+AGG | + | chr8.1:75313997-75314016 | MS.gene060512:CDS | 50.0% |
| !! | TACTACTCGGTGTGGGACTT+TGG | + | chr8.1:75312738-75312757 | MS.gene060512:intron | 50.0% |
| AGCACAGACACTGCTGTTGG+TGG | + | chr8.1:75311944-75311963 | MS.gene060512:intron | 55.0% | |
| AGTAAAGCCTCGTCACCTCC+AGG | - | chr8.1:75313451-75313470 | None:intergenic | 55.0% | |
| CAGCAGTGTCTGTGCTTCAG+AGG | - | chr8.1:75311940-75311959 | None:intergenic | 55.0% | |
| GACCGAAGAGGCAGATCTGT+TGG | - | chr8.1:75312931-75312950 | None:intergenic | 55.0% | |
| GATTCCGTGCTTGACAGGTG+AGG | + | chr8.1:75310885-75310904 | MS.gene060512:intron | 55.0% | |
| GCACAGACACTGCTGTTGGT+GGG | + | chr8.1:75311945-75311964 | MS.gene060512:intron | 55.0% | |
| GCTTCTGACACGTGTCGTAC+CGG | - | chr8.1:75312001-75312020 | None:intergenic | 55.0% | |
| GTACGACACGTGTCAGAAGC+AGG | + | chr8.1:75312001-75312020 | MS.gene060512:intron | 55.0% | |
| GTTAGACACGAGCCAGATGC+AGG | - | chr8.1:75312478-75312497 | None:intergenic | 55.0% | |
| TAAGGGAAGGAACCCTCTCC+AGG | - | chr8.1:75312672-75312691 | None:intergenic | 55.0% | |
| TCTCTGTTGCCGAGTCACTG+TGG | - | chr8.1:75313973-75313992 | None:intergenic | 55.0% | |
| TGAAGCACGGACACTGCTGT+TGG | - | chr8.1:75312527-75312546 | None:intergenic | 55.0% | |
| TGATCATCCTGGAGGTGACG+AGG | + | chr8.1:75313441-75313460 | MS.gene060512:CDS | 55.0% | |
| TGTCGGATTCCGTGCTTGAC+AGG | + | chr8.1:75310880-75310899 | MS.gene060512:intron | 55.0% | |
| TTGGCGACATGGGAATCAGC+AGG | - | chr8.1:75312868-75312887 | None:intergenic | 55.0% | |
| ! | AGCTGCTGCTGGAAGAGTGT+TGG | - | chr8.1:75314029-75314048 | None:intergenic | 55.0% |
| ! | GGCACTGCAAAGACTCGGTT+TGG | - | chr8.1:75312412-75312431 | None:intergenic | 55.0% |
| !! | GCAGAGGCACTGCAAAGACT+CGG | - | chr8.1:75312417-75312436 | None:intergenic | 55.0% |
| AGACACGAGCCAGATGCAGG+TGG | - | chr8.1:75312475-75312494 | None:intergenic | 60.0% | |
| AGCACGGACACTGCTGTTGG+TGG | - | chr8.1:75312524-75312543 | None:intergenic | 60.0% | |
| CACGTGTCAGAAGCAGGTGG+CGG | + | chr8.1:75312007-75312026 | MS.gene060512:intron | 60.0% | |
| CGACACGTGTCAGAAGCAGG+TGG | + | chr8.1:75312004-75312023 | MS.gene060512:intron | 60.0% | |
| GCGATCTGATGGAGCCGATG+TGG | + | chr8.1:75310044-75310063 | MS.gene060512:intron | 60.0% | |
| GTCTAACGCGTGTCCGACAC+CGG | + | chr8.1:75312491-75312510 | MS.gene060512:intron | 60.0% | |
| TCTAACGCGTGTCCGACACC+GGG | + | chr8.1:75312492-75312511 | MS.gene060512:intron | 60.0% | |
| ! | TGCTGTTGGTGGACGTGTCC+CGG | - | chr8.1:75312513-75312532 | None:intergenic | 60.0% |
| !! | TGCTGTTGGTGGGCTTGTCC+CGG | + | chr8.1:75311955-75311974 | MS.gene060512:intron | 60.0% |
| CACGAGCCAGATGCAGGTGG+TGG | - | chr8.1:75312472-75312491 | None:intergenic | 65.0% | |
| GGGACACCACCACCTGCATC+TGG | + | chr8.1:75312463-75312482 | MS.gene060512:intron | 65.0% | |
| GTCGGACACGCGTCAGACAC+CGG | + | chr8.1:75311979-75311998 | MS.gene060512:intron | 65.0% | |
| GTCTGACGCGTGTCCGACAC+CGG | - | chr8.1:75311977-75311996 | None:intergenic | 65.0% | |
| TCTGACGCGTGTCCGACACC+GGG | - | chr8.1:75311976-75311995 | None:intergenic | 65.0% | |
| ! | TGGTGGACGTGTCCCGGTGT+CGG | - | chr8.1:75312507-75312526 | None:intergenic | 65.0% |
| !! | TGGTGGGCTTGTCCCGGTGT+CGG | + | chr8.1:75311961-75311980 | MS.gene060512:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 75309701 | 75314210 | 75309701 | ID=MS.gene060512 |
| chr8.1 | mRNA | 75309701 | 75314210 | 75309701 | ID=MS.gene060512.t1;Parent=MS.gene060512 |
| chr8.1 | exon | 75309701 | 75309787 | 75309701 | ID=MS.gene060512.t1.exon1;Parent=MS.gene060512.t1 |
| chr8.1 | CDS | 75309701 | 75309787 | 75309701 | ID=cds.MS.gene060512.t1;Parent=MS.gene060512.t1 |
| chr8.1 | exon | 75313415 | 75313481 | 75313415 | ID=MS.gene060512.t1.exon2;Parent=MS.gene060512.t1 |
| chr8.1 | CDS | 75313415 | 75313481 | 75313415 | ID=cds.MS.gene060512.t1;Parent=MS.gene060512.t1 |
| chr8.1 | exon | 75313936 | 75314210 | 75313936 | ID=MS.gene060512.t1.exon3;Parent=MS.gene060512.t1 |
| chr8.1 | CDS | 75313936 | 75314210 | 75313936 | ID=cds.MS.gene060512.t1;Parent=MS.gene060512.t1 |
| Gene Sequence |
| Protein sequence |
