AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene53435


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53435.t1 MTR_2g008225 74.688 320 80 1 4 322 144 463 8.26e-179 503
MS.gene53435.t1 MTR_2g008220 73.684 323 84 1 1 322 140 462 8.84e-178 500
MS.gene53435.t1 MTR_6g036650 67.692 325 102 2 1 322 144 468 4.72e-159 453
MS.gene53435.t1 MTR_4g077960 67.284 324 99 4 1 322 117 435 1.38e-157 448
MS.gene53435.t1 MTR_2g046620 63.467 323 111 3 1 321 141 458 7.44e-152 434
MS.gene53435.t1 MTR_6g042310 62.963 324 113 3 1 322 143 461 2.23e-146 421
MS.gene53435.t1 MTR_4g123553 61.846 325 115 3 1 322 140 458 2.25e-146 420
MS.gene53435.t1 MTR_2g008226 56.061 330 134 5 1 322 141 467 1.40e-129 378
MS.gene53435.t1 MTR_3g435310 53.538 325 98 5 1 322 143 417 6.73e-111 328
MS.gene53435.t1 MTR_8g068330 37.994 329 188 7 1 318 134 457 1.94e-65 213
MS.gene53435.t1 MTR_8g068360 36.228 334 192 6 1 321 138 463 1.19e-63 209
MS.gene53435.t1 MTR_8g068340 35.455 330 195 6 1 318 138 461 1.89e-59 197
MS.gene53435.t1 MTR_7g067330 40.230 261 146 4 59 318 171 422 2.37e-59 196
MS.gene53435.t1 MTR_7g067120 39.033 269 154 4 51 318 163 422 3.11e-56 188
MS.gene53435.t1 MTR_8g007650 34.043 329 204 8 3 321 137 462 1.99e-52 179
MS.gene53435.t1 MTR_8g007565 33.739 329 205 8 3 321 137 462 1.10e-51 177
MS.gene53435.t1 MTR_5g066410 39.676 247 135 6 87 321 194 438 4.91e-46 162
MS.gene53435.t1 MTR_2g014900 32.927 328 202 8 3 321 134 452 1.54e-42 152
MS.gene53435.t1 MTR_4g079250 34.139 331 188 14 1 317 136 450 1.51e-37 139
MS.gene53435.t1 MTR_4g079270 33.553 304 181 11 25 317 157 450 2.70e-37 139
MS.gene53435.t1 MTR_1g090270 32.258 310 188 8 25 321 161 461 6.73e-35 132
MS.gene53435.t1 MTR_4g059370 30.769 312 186 12 25 321 92 388 4.14e-33 126
MS.gene53435.t1 MTR_6g023665 32.491 277 163 7 40 301 180 447 4.48e-29 116
MS.gene53435.t1 MTR_2g083430 31.902 326 200 11 4 317 135 450 8.35e-29 115
MS.gene53435.t1 MTR_8g009050 32.877 219 125 5 100 302 231 443 6.69e-28 113
MS.gene53435.t1 MTR_6g488280 31.295 278 165 7 40 301 173 440 1.60e-27 112
MS.gene53435.t1 MTR_0428s0010 31.295 278 165 7 40 301 173 440 1.60e-27 112
MS.gene53435.t1 MTR_8g009055 29.338 317 188 11 7 302 142 443 3.17e-27 111
MS.gene53435.t1 MTR_1g019520 34.409 186 108 1 132 303 5 190 4.24e-27 106
MS.gene53435.t1 MTR_8g008990 32.727 220 126 3 100 302 231 445 4.64e-27 110
MS.gene53435.t1 MTR_8g012745 34.171 199 112 4 120 303 252 446 8.52e-27 110
MS.gene53435.t1 MTR_1g019510 29.167 264 161 6 59 303 185 441 9.08e-27 110
MS.gene53435.t1 MTR_0078s0060 31.890 254 144 8 77 308 205 451 2.23e-26 108
MS.gene53435.t1 MTR_8g012635 32.489 237 128 7 84 300 222 446 2.71e-26 108
MS.gene53435.t1 MTR_8g008970 35.106 188 109 2 132 306 258 445 4.68e-26 108
MS.gene53435.t1 MTR_8g008970 31.707 205 131 4 100 303 570 766 1.12e-20 93.2
MS.gene53435.t1 MTR_1g107350 29.801 302 180 11 38 316 175 467 6.11e-26 107
MS.gene53435.t1 MTR_8g009063 31.364 220 129 4 100 303 238 451 9.57e-26 107
MS.gene53435.t1 MTR_2g083480 30.097 309 195 10 25 322 157 455 1.19e-25 106
MS.gene53435.t1 MTR_8g009067 32.979 188 113 2 132 306 140 327 3.67e-25 103
MS.gene53435.t1 MTR_7g046490 31.925 213 123 4 103 300 233 438 4.07e-25 105
MS.gene53435.t1 MTR_8g012730 33.838 198 112 4 121 300 87 283 4.74e-25 102
MS.gene53435.t1 MTR_8g009067 32.979 188 113 2 132 306 258 445 8.04e-25 104
MS.gene53435.t1 MTR_8g006220 30.672 238 133 7 72 285 204 433 8.15e-25 104
MS.gene53435.t1 MTR_1g107375 29.880 251 156 7 80 316 208 452 1.72e-24 103
MS.gene53435.t1 MTR_0184s0040 31.535 241 143 7 77 300 220 455 1.78e-24 103
MS.gene53435.t1 MTR_0078s0190 31.535 241 143 7 77 300 220 455 1.78e-24 103
MS.gene53435.t1 MTR_5g019580 32.468 231 131 6 98 309 237 461 1.89e-24 103
MS.gene53435.t1 MTR_5g019580 32.468 231 131 6 98 309 261 485 1.97e-24 103
MS.gene53435.t1 MTR_8g006710 31.325 249 150 6 68 301 199 441 2.86e-24 102
MS.gene53435.t1 MTR_4g031800 35.023 217 123 7 103 302 234 449 3.78e-24 102
MS.gene53435.t1 MTR_8g465670 33.668 199 109 6 103 285 235 426 4.06e-24 102
MS.gene53435.t1 MTR_0184s0030 32.787 183 107 3 133 300 261 442 5.40e-24 102
MS.gene53435.t1 MTR_8g006730 30.544 239 145 6 78 301 210 442 5.77e-24 102
MS.gene53435.t1 MTR_2g083380 31.270 307 184 10 25 317 174 467 5.91e-24 102
MS.gene53435.t1 MTR_8g012630 33.333 186 105 4 133 300 206 390 7.17e-24 101
MS.gene53435.t1 MTR_8g009073 31.500 200 121 3 120 306 120 316 7.50e-24 100
MS.gene53435.t1 MTR_8g012650 30.380 237 133 7 84 300 222 446 7.74e-24 101
MS.gene53435.t1 MTR_5g035560 31.414 191 124 3 132 318 261 448 9.45e-24 101
MS.gene53435.t1 MTR_8g027885 30.769 234 137 6 87 303 225 450 1.15e-23 101
MS.gene53435.t1 MTR_8g009073 31.500 200 121 3 120 306 249 445 1.40e-23 100
MS.gene53435.t1 MTR_7g117170 30.769 221 133 3 116 317 252 471 1.68e-23 100
MS.gene53435.t1 MTR_8g027870 30.901 233 136 6 87 302 225 449 2.46e-23 100
MS.gene53435.t1 MTR_5g045960 33.333 231 131 8 94 303 234 462 3.03e-23 100
MS.gene53435.t1 MTR_0078s0010 32.418 182 108 4 133 300 260 440 3.68e-23 99.8
MS.gene53435.t1 MTR_8g006270 30.417 240 144 6 77 298 202 436 4.09e-23 99.8
MS.gene53435.t1 MTR_5g035580 29.885 261 163 9 70 315 196 451 6.78e-23 99.0
MS.gene53435.t1 MTR_8g064870 29.658 263 159 8 80 319 216 475 6.84e-23 99.0
MS.gene53435.t1 MTR_7g047030 28.736 261 162 8 59 300 185 440 6.88e-23 99.0
MS.gene53435.t1 MTR_7g047270 28.736 261 162 8 59 300 185 440 6.88e-23 99.0
MS.gene53435.t1 MTR_2g083490 30.211 331 200 13 3 317 135 450 7.02e-23 99.0
MS.gene53435.t1 MTR_3g049970 29.921 254 160 8 80 316 216 468 7.10e-23 99.0
MS.gene53435.t1 MTR_6g013990 28.136 295 185 10 21 302 174 454 7.75e-23 99.0
MS.gene53435.t1 MTR_1g090280 37.222 180 101 5 153 321 133 311 1.24e-22 96.3
MS.gene53435.t1 MTR_3g008010 28.571 280 178 9 36 303 186 455 1.25e-22 98.2
MS.gene53435.t1 MTR_1g032490 30.153 262 157 9 80 320 217 473 3.95e-22 96.7
MS.gene53435.t1 MTR_4g128690 31.395 258 140 8 38 294 200 421 5.10e-22 96.3
MS.gene53435.t1 MTR_6g005600 33.508 191 106 5 133 306 259 445 5.90e-22 96.3
MS.gene53435.t1 MTR_7g102450 29.960 247 148 7 80 303 205 449 7.62e-22 95.9
MS.gene53435.t1 MTR_8g006260 29.961 257 147 7 78 311 209 455 1.02e-21 95.5
MS.gene53435.t1 MTR_8g071070 34.872 195 110 6 80 263 221 409 1.07e-21 95.5
MS.gene53435.t1 MTR_1g107285 29.804 255 153 9 80 316 216 462 1.17e-21 95.5
MS.gene53435.t1 MTR_8g077590 32.663 199 117 4 115 300 247 441 1.26e-21 95.5
MS.gene53435.t1 MTR_2g083420 28.483 323 192 12 8 322 140 431 1.31e-21 95.1
MS.gene53435.t1 MTR_1g107360 28.685 251 159 7 80 318 216 458 1.43e-21 95.1
MS.gene53435.t1 MTR_4g485630 30.986 213 130 5 108 303 239 451 1.92e-21 94.7
MS.gene53435.t1 MTR_6g033615 34.078 179 104 5 132 304 252 422 2.59e-21 94.4
MS.gene53435.t1 MTR_4g128720 32.812 256 137 7 39 294 204 424 3.00e-21 94.0
MS.gene53435.t1 MTR_6g033625 34.706 170 104 4 132 295 266 434 3.53e-21 94.0
MS.gene53435.t1 MTR_6g038230 28.358 268 174 8 67 321 192 454 3.96e-21 94.0
MS.gene53435.t1 MTR_1g107365 28.854 253 155 7 80 316 247 490 5.50e-21 93.6
MS.gene53435.t1 MTR_0891s0010 28.226 248 149 8 71 302 32 266 6.38e-21 91.3
MS.gene53435.t1 MTR_5g090610 29.644 253 142 10 76 301 193 436 6.60e-21 93.2
MS.gene53435.t1 MTR_3g009510 31.364 220 127 7 107 302 237 456 8.92e-21 92.8
MS.gene53435.t1 MTR_2g083390 27.157 313 189 12 18 322 150 431 1.23e-20 92.4
MS.gene53435.t1 MTR_4g485590 30.435 230 145 7 42 264 159 380 1.27e-20 92.0
MS.gene53435.t1 MTR_2g035040 30.415 217 127 8 110 302 147 363 1.77e-20 91.3
MS.gene53435.t1 MTR_1g107315 29.297 256 159 8 80 316 215 467 2.99e-20 91.3
MS.gene53435.t1 MTR_8g066610 28.033 239 154 6 80 303 220 455 3.06e-20 91.3
MS.gene53435.t1 MTR_4g008630 27.568 185 121 3 133 305 259 442 4.72e-20 90.9
MS.gene53435.t1 MTR_8g064880 29.004 231 150 6 80 297 218 447 4.76e-20 90.9
MS.gene53435.t1 MTR_3g479520 31.169 231 129 8 36 247 189 408 8.68e-20 90.1
MS.gene53435.t1 MTR_6g033660 30.542 203 134 3 104 300 237 438 1.00e-19 89.7
MS.gene53435.t1 MTR_6g033725 29.557 203 136 3 104 300 235 436 1.06e-19 89.7
MS.gene53435.t1 MTR_6g014220 26.690 281 180 9 36 302 186 454 1.39e-19 89.4
MS.gene53435.t1 MTR_0036s0220 29.297 256 161 8 34 275 185 434 1.81e-19 89.0
MS.gene53435.t1 MTR_3g479610 28.077 260 163 9 80 322 62 314 1.90e-19 87.4
MS.gene53435.t1 MTR_5g090580 29.804 255 141 11 76 302 207 451 1.91e-19 89.0
MS.gene53435.t1 MTR_5g072810 28.077 260 155 10 77 319 207 451 2.23e-19 88.6
MS.gene53435.t1 MTR_0009s0240 32.642 193 116 5 80 263 212 399 2.28e-19 88.6
MS.gene53435.t1 MTR_5g090660 31.225 253 140 11 76 302 205 449 2.39e-19 89.0
MS.gene53435.t1 MTR_6g033675 38.028 142 82 3 132 267 266 407 3.27e-19 88.2
MS.gene53435.t1 MTR_5g045970 30.412 194 119 4 132 309 282 475 3.90e-19 88.2
MS.gene53435.t1 MTR_6g038240 27.632 228 151 8 78 297 205 426 4.00e-19 87.8
MS.gene53435.t1 MTR_1g107380 27.843 255 167 8 80 320 223 474 4.45e-19 87.8
MS.gene53435.t1 MTR_2g034990 32.759 174 105 4 105 267 242 414 4.59e-19 87.8
MS.gene53435.t1 MTR_7g117405 30.418 263 157 9 58 303 202 455 4.61e-19 87.8
MS.gene53435.t1 MTR_5g087620 28.455 246 158 7 73 301 221 465 5.11e-19 87.8
MS.gene53435.t1 MTR_7g102460 36.585 164 87 6 126 275 272 432 8.31e-19 87.0
MS.gene53435.t1 MTR_3g079480 28.448 232 143 7 80 297 238 460 1.31e-18 86.7
MS.gene53435.t1 MTR_7g070610 28.856 201 125 5 118 303 267 464 1.38e-18 86.7
MS.gene53435.t1 MTR_8g074550 28.679 265 145 7 75 302 204 461 1.76e-18 86.3
MS.gene53435.t1 MTR_5g090630 30.830 253 139 10 77 302 199 442 2.04e-18 85.9
MS.gene53435.t1 MTR_1g029540 25.806 186 125 3 133 306 256 440 2.06e-18 85.9
MS.gene53435.t1 MTR_7g070660 31.522 184 109 5 133 300 272 454 2.21e-18 85.9
MS.gene53435.t1 MTR_4g485620 29.213 178 118 4 133 303 256 432 2.91e-18 85.5
MS.gene53435.t1 MTR_6g014290 26.724 232 155 6 80 302 229 454 3.17e-18 85.5
MS.gene53435.t1 MTR_7g102490 32.520 246 137 8 54 275 194 434 3.30e-18 85.5
MS.gene53435.t1 MTR_6g014310 30.636 173 111 4 133 302 291 457 3.58e-18 85.1
MS.gene53435.t1 MTR_7g012120 35.616 146 82 4 133 267 272 416 4.40e-18 85.1
MS.gene53435.t1 MTR_8g059425 30.058 173 112 4 133 302 288 454 5.24e-18 84.7
MS.gene53435.t1 MTR_7g070780 32.867 143 89 3 118 256 265 404 5.72e-18 84.7
MS.gene53435.t1 MTR_6g014250 27.039 233 155 6 80 303 229 455 6.28e-18 84.7
MS.gene53435.t1 MTR_8g090095 28.959 221 137 5 118 319 258 477 6.62e-18 84.3
MS.gene53435.t1 MTR_8g032950 28.440 218 136 5 105 302 240 457 6.91e-18 84.3
MS.gene53435.t1 MTR_7g070800 36.719 128 77 2 133 256 269 396 7.32e-18 84.3
MS.gene53435.t1 MTR_4g117980 28.111 217 137 6 105 302 242 458 8.12e-18 84.3
MS.gene53435.t1 MTR_6g011340 26.429 280 181 10 36 302 189 456 8.43e-18 84.3
MS.gene53435.t1 MTR_2g035020 31.214 173 109 3 105 267 242 414 9.12e-18 84.0
MS.gene53435.t1 MTR_6g014190 26.695 236 151 6 81 304 40 265 1.02e-17 82.4
MS.gene53435.t1 MTR_5g090620 32.653 196 106 6 130 302 260 452 1.04e-17 84.0
MS.gene53435.t1 MTR_7g470610 34.416 154 93 4 132 278 133 285 1.12e-17 82.0
MS.gene53435.t1 MTR_7g070583 34.416 154 93 4 132 278 133 285 1.12e-17 82.0
MS.gene53435.t1 MTR_7g102520 39.837 123 70 2 129 247 277 399 1.21e-17 84.0
MS.gene53435.t1 MTR_6g038200 26.937 271 174 8 67 321 192 454 1.63e-17 83.2
MS.gene53435.t1 MTR_6g013440 25.483 259 175 7 55 302 206 457 1.75e-17 83.2
MS.gene53435.t1 MTR_3g009490 33.133 166 91 4 157 302 3 168 1.91e-17 79.3
MS.gene53435.t1 MTR_7g080935 26.335 281 190 9 52 321 175 449 1.91e-17 83.2
MS.gene53435.t1 MTR_2g046820 29.876 241 137 8 80 302 206 432 2.03e-17 82.8
MS.gene53435.t1 MTR_1g062380 31.461 178 106 4 133 294 284 461 2.10e-17 83.2
MS.gene53435.t1 MTR_6g013900 25.177 282 186 10 36 304 188 457 2.28e-17 82.8
MS.gene53435.t1 MTR_4g117960 29.224 219 133 7 105 302 240 457 2.39e-17 82.8
MS.gene53435.t1 MTR_7g070940 28.571 252 140 7 81 296 217 464 2.55e-17 82.8
MS.gene53435.t1 MTR_5g004940 30.814 172 109 3 133 295 199 369 2.69e-17 82.4
MS.gene53435.t1 MTR_5g090600 29.752 242 141 12 76 302 203 430 3.34e-17 82.4
MS.gene53435.t1 MTR_0288s0020 27.876 226 139 6 80 302 233 437 3.50e-17 82.4
MS.gene53435.t1 MTR_8g088560 26.087 230 160 6 77 299 205 431 3.51e-17 82.4
MS.gene53435.t1 MTR_3g479470 30.698 215 127 8 80 277 230 439 4.40e-17 82.0
MS.gene53435.t1 MTR_7g070810 29.333 225 134 8 42 256 185 394 5.48e-17 81.6
MS.gene53435.t1 MTR_2g046750 28.037 214 137 5 102 302 233 442 5.51e-17 81.6
MS.gene53435.t1 MTR_5g464810 27.309 249 157 9 36 269 187 426 6.25e-17 81.6
MS.gene53435.t1 MTR_5g064240 27.309 249 157 9 36 269 187 426 6.25e-17 81.6
MS.gene53435.t1 MTR_4g024020 35.758 165 88 6 126 275 274 435 7.55e-17 81.3
MS.gene53435.t1 MTR_7g071040 31.383 188 109 6 133 303 284 468 7.57e-17 81.3
MS.gene53435.t1 MTR_6g014170 27.111 225 149 6 89 304 222 440 7.89e-17 81.3
MS.gene53435.t1 MTR_5g029800 24.898 245 163 7 35 267 175 410 8.40e-17 81.3
MS.gene53435.t1 MTR_4g117890 28.736 174 113 3 105 267 234 407 8.74e-17 81.3
MS.gene53435.t1 MTR_5g027210 28.365 208 117 5 80 257 213 418 8.78e-17 81.3
MS.gene53435.t1 MTR_6g014020 27.586 232 152 6 80 302 232 456 9.59e-17 80.9
MS.gene53435.t1 MTR_7g011470 28.814 177 117 4 129 302 272 442 9.89e-17 80.9
MS.gene53435.t1 MTR_5g090670 27.309 249 149 8 80 302 211 453 1.04e-16 80.9
MS.gene53435.t1 MTR_7g011470 28.902 173 114 4 133 302 272 438 1.05e-16 80.9
MS.gene53435.t1 MTR_5g098930 28.514 249 146 9 80 302 202 444 1.21e-16 80.9
MS.gene53435.t1 MTR_6g014270 27.273 231 154 6 80 302 231 455 1.25e-16 80.9
MS.gene53435.t1 MTR_6g038220 26.568 271 175 8 67 321 191 453 1.29e-16 80.5
MS.gene53435.t1 MTR_7g070930 34.483 145 90 3 132 272 280 423 1.41e-16 80.5
MS.gene53435.t1 MTR_6g035185 27.556 225 134 8 108 307 240 460 1.65e-16 80.5
MS.gene53435.t1 MTR_5g040030 29.592 196 121 7 121 302 272 464 1.67e-16 80.5
MS.gene53435.t1 MTR_5g016660 31.500 200 113 9 119 301 267 459 1.72e-16 80.1
MS.gene53435.t1 MTR_7g070860 34.677 124 71 2 133 256 270 383 2.14e-16 80.1
MS.gene53435.t1 MTR_7g102550 31.068 206 116 7 129 316 273 470 2.58e-16 79.7
MS.gene53435.t1 MTR_7g055710 32.867 143 89 3 118 256 265 404 2.64e-16 79.7
MS.gene53435.t1 MTR_7g080940 24.828 290 188 11 54 322 177 457 2.97e-16 79.3
MS.gene53435.t1 MTR_5g058320 26.840 231 155 6 80 302 217 441 3.07e-16 79.3
MS.gene53435.t1 MTR_5g090700 29.952 207 118 6 77 263 210 409 3.16e-16 79.3
MS.gene53435.t1 MTR_6g014200 29.480 173 113 4 133 302 287 453 3.58e-16 79.3
MS.gene53435.t1 MTR_6g013450 25.974 231 157 6 80 302 233 457 3.66e-16 79.3
MS.gene53435.t1 MTR_4g117950 28.111 217 136 5 105 303 226 440 3.88e-16 79.3
MS.gene53435.t1 MTR_6g035265 26.009 223 141 6 105 307 233 451 4.27e-16 79.0
MS.gene53435.t1 MTR_5g067170 28.042 189 117 6 133 302 268 456 5.05e-16 79.0
MS.gene53435.t1 MTR_5g016480 30.653 199 123 6 133 318 275 471 5.28e-16 79.0
MS.gene53435.t1 MTR_6g014050 25.957 235 152 6 80 302 233 457 5.35e-16 79.0
MS.gene53435.t1 MTR_6g013960 25.306 245 164 7 71 303 220 457 5.49e-16 79.0
MS.gene53435.t1 MTR_8g466240 32.515 163 99 4 129 280 257 419 6.00e-16 78.6
MS.gene53435.t1 MTR_4g485640 31.633 196 109 7 62 242 389 574 6.66e-16 79.0
MS.gene53435.t1 MTR_4g118000 32.215 149 90 3 132 272 257 402 8.28e-16 78.2
MS.gene53435.t1 MTR_6g038300 23.016 252 179 7 78 318 205 452 8.44e-16 78.2
MS.gene53435.t1 MTR_4g108250 32.639 144 92 3 133 272 281 423 1.14e-15 77.8
MS.gene53435.t1 MTR_2g059240 33.333 156 94 3 133 280 280 433 1.41e-15 77.4
MS.gene53435.t1 MTR_2g098430 27.386 241 157 9 78 304 216 452 1.47e-15 77.4
MS.gene53435.t1 MTR_2g008210 30.857 175 113 4 133 303 284 454 1.50e-15 77.4
MS.gene53435.t1 MTR_0536s0010 27.982 218 135 7 105 303 240 454 1.51e-15 77.4
MS.gene53435.t1 MTR_6g014187 25.322 233 160 6 80 304 232 458 1.57e-15 77.4
MS.gene53435.t1 MTR_7g080900 26.721 247 147 7 78 295 206 447 1.66e-15 77.4
MS.gene53435.t1 MTR_7g070870 28.571 224 135 9 42 255 192 400 2.11e-15 77.0
MS.gene53435.t1 MTR_5g090690 36.054 147 74 5 103 234 166 307 3.16e-15 76.3
MS.gene53435.t1 MTR_3g479490 25.532 282 184 10 36 302 180 450 3.27e-15 76.3
MS.gene53435.t1 MTR_2g040530 28.426 197 126 5 80 263 208 402 3.36e-15 76.3
MS.gene53435.t1 MTR_7g102560 31.183 186 110 6 133 301 275 459 3.36e-15 76.3
MS.gene53435.t1 MTR_4g064987 31.492 181 111 5 132 305 257 431 3.48e-15 76.3
MS.gene53435.t1 MTR_4g064987 31.492 181 111 5 132 305 251 425 3.49e-15 76.3
MS.gene53435.t1 MTR_3g084540 26.360 239 155 7 80 299 211 447 4.11e-15 76.3
MS.gene53435.t1 MTR_7g070910 35.115 131 77 3 132 256 277 405 4.63e-15 75.9
MS.gene53435.t1 MTR_6g013920 25.267 281 187 10 36 304 188 457 4.69e-15 75.9
MS.gene53435.t1 MTR_8g009840 31.250 160 93 1 147 289 332 491 5.16e-15 75.9
MS.gene53435.t1 MTR_7g013180 28.102 274 166 11 61 318 183 441 5.83e-15 75.5
MS.gene53435.t1 MTR_0536s0020 32.432 148 90 3 105 242 239 386 5.84e-15 75.9
MS.gene53435.t1 MTR_5g072830 25.969 258 167 10 75 319 200 446 5.89e-15 75.5
MS.gene53435.t1 MTR_5g464760 28.194 227 137 8 80 283 230 453 5.94e-15 75.5
MS.gene53435.t1 MTR_7g070740 32.432 148 89 4 132 272 276 419 6.09e-15 75.5
MS.gene53435.t1 MTR_5g039900 30.653 199 121 8 117 302 266 460 6.27e-15 75.5
MS.gene53435.t1 MTR_0477s0010 28.249 177 120 3 128 302 122 293 7.32e-15 74.3
MS.gene53435.t1 MTR_7g071050 28.054 221 141 7 115 322 215 430 7.42e-15 75.1
MS.gene53435.t1 MTR_1g040310 30.709 127 85 1 133 256 279 405 9.23e-15 75.1
MS.gene53435.t1 MTR_4g094220 23.944 284 188 10 36 302 183 455 9.93e-15 75.1
MS.gene53435.t1 MTR_8g007585 28.902 173 114 4 133 302 202 368 1.53e-14 73.9
MS.gene53435.t1 MTR_7g039550 29.817 218 128 9 107 302 24 238 1.76e-14 72.8
MS.gene53435.t1 MTR_6g035295 33.858 127 81 2 133 256 279 405 1.78e-14 74.3
MS.gene53435.t1 MTR_8g044140 32.168 143 87 3 119 256 233 370 1.83e-14 74.3
MS.gene53435.t1 MTR_3g084520 26.160 237 157 6 80 299 211 446 2.10e-14 73.9
MS.gene53435.t1 MTR_8g043470 27.485 171 115 4 133 300 188 352 6.05e-14 72.4
MS.gene53435.t1 MTR_7g013240 30.000 150 101 4 133 281 252 398 7.43e-14 72.4
MS.gene53435.t1 MTR_6g014040 24.910 277 189 8 36 302 190 457 8.66e-14 72.0
MS.gene53435.t1 MTR_8g083290 25.203 246 164 7 70 299 196 437 8.82e-14 72.0
MS.gene53435.t1 MTR_3g069690 27.684 177 116 5 132 302 256 426 1.00e-13 72.0
MS.gene53435.t1 MTR_4g095008 27.451 255 163 10 64 303 195 442 1.24e-13 71.6
MS.gene53435.t1 MTR_6g014150 32.479 117 76 2 133 247 287 402 2.24e-13 70.9
MS.gene53435.t1 MTR_2g086283 29.560 159 90 4 164 317 187 328 2.41e-13 70.1
MS.gene53435.t1 MTR_5g072820 30.041 243 144 10 75 305 200 428 2.65e-13 70.5
MS.gene53435.t1 MTR_7g013260 27.059 170 120 4 133 301 253 419 3.59e-13 70.1
MS.gene53435.t1 MTR_5g098960 33.858 127 78 4 133 256 262 385 5.80e-13 69.7
MS.gene53435.t1 MTR_7g080950 26.804 194 132 5 133 321 259 447 5.93e-13 69.7
MS.gene53435.t1 MTR_5g070040 27.861 201 135 7 80 271 215 414 8.57e-13 68.9
MS.gene53435.t1 MTR_3g031400 26.991 226 151 7 80 300 208 424 9.88e-13 68.9
MS.gene53435.t1 MTR_7g013220 29.048 210 134 7 79 277 200 405 1.48e-12 68.2
MS.gene53435.t1 MTR_4g082810 30.247 162 101 5 102 256 240 396 1.65e-12 68.2
MS.gene53435.t1 MTR_5g072860 24.199 281 189 9 36 306 180 446 2.20e-12 67.8
MS.gene53435.t1 MTR_4g082820 28.947 190 120 5 80 256 207 394 2.40e-12 67.8
MS.gene53435.t1 MTR_3g031450 27.074 229 151 7 80 300 206 426 4.85e-12 67.0
MS.gene53435.t1 MTR_5g070090 26.360 239 148 9 80 302 215 441 6.51e-12 66.2
MS.gene53435.t1 MTR_7g013200 28.477 151 104 3 133 282 252 399 7.05e-12 66.2
MS.gene53435.t1 MTR_2086s0010 26.623 154 103 4 153 302 1 148 9.88e-11 60.5
MS.gene53435.t1 MTR_1996s0010 26.623 154 103 4 153 302 1 148 9.88e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53435.t1 AT2G22590 40.199 301 166 6 30 321 171 466 7.83e-72 230
MS.gene53435.t1 AT5G65550 38.188 309 170 5 24 321 161 459 2.59e-71 228
MS.gene53435.t1 AT5G49690 34.969 326 197 6 2 322 137 452 2.82e-62 205
MS.gene53435.t1 AT2G22930 33.840 263 148 8 70 318 184 434 8.03e-36 134
MS.gene53435.t1 AT4G09500 33.080 263 150 8 70 318 184 434 3.46e-35 132
MS.gene53435.t1 AT5G53990 35.433 254 147 6 76 321 193 437 4.73e-34 130
MS.gene53435.t1 AT1G64910 35.039 254 148 6 76 321 193 437 4.11e-32 124
MS.gene53435.t1 AT3G29630 29.878 328 194 8 4 318 133 437 5.69e-32 124
MS.gene53435.t1 AT4G27570 34.387 253 149 8 78 322 201 444 7.62e-32 124
MS.gene53435.t1 AT4G27560 33.725 255 152 8 76 322 199 444 5.16e-31 121
MS.gene53435.t1 AT5G54010 33.465 254 152 8 76 321 199 443 1.04e-30 120
MS.gene53435.t1 AT4G09500 31.418 261 132 7 70 318 184 409 3.45e-30 119
MS.gene53435.t1 AT1G64920 32.558 258 153 7 76 321 193 441 8.74e-30 118
MS.gene53435.t1 AT3G29630 28.704 324 177 8 4 318 133 411 2.52e-28 114
MS.gene53435.t1 AT1G50580 30.888 259 154 7 76 321 192 438 1.50e-27 112
MS.gene53435.t1 AT3G21790 34.156 243 136 8 80 302 217 455 1.03e-26 110
MS.gene53435.t1 AT4G36770 34.247 219 118 4 100 302 232 440 6.66e-26 107
MS.gene53435.t1 AT3G50740 28.958 259 150 6 70 302 199 449 6.69e-26 107
MS.gene53435.t1 AT1G30530 34.031 191 119 4 132 321 263 447 4.48e-25 105
MS.gene53435.t1 AT2G18570 34.259 216 120 5 99 300 234 441 3.06e-24 102
MS.gene53435.t1 AT4G15490 31.602 231 150 6 74 298 211 439 6.61e-24 102
MS.gene53435.t1 AT1G01420 33.019 212 125 4 105 302 235 443 7.65e-24 101
MS.gene53435.t1 AT1G01420 33.019 212 125 4 105 302 238 446 7.71e-24 102
MS.gene53435.t1 AT2G31790 29.181 281 174 13 61 321 181 456 9.16e-24 101
MS.gene53435.t1 AT2G15490 31.933 238 145 9 80 303 221 455 1.35e-23 101
MS.gene53435.t1 AT1G51210 31.092 238 142 4 71 300 209 432 3.61e-23 99.4
MS.gene53435.t1 AT3G21800 32.927 246 136 9 80 302 213 452 4.14e-23 99.8
MS.gene53435.t1 AT1G07250 33.617 235 135 9 80 301 222 448 4.41e-23 99.8
MS.gene53435.t1 AT4G15260 30.882 272 144 10 80 318 95 355 6.31e-23 97.8
MS.gene53435.t1 AT4G01070 31.944 216 128 3 102 303 235 445 1.09e-22 98.6
MS.gene53435.t1 AT2G15490 31.950 241 144 10 80 303 221 458 1.36e-22 98.2
MS.gene53435.t1 AT3G53150 33.480 227 126 8 80 283 232 456 2.19e-22 97.8
MS.gene53435.t1 AT1G05680 25.681 257 174 8 77 321 201 452 3.01e-22 97.1
MS.gene53435.t1 AT5G14860 30.000 230 149 6 80 303 229 452 4.49e-22 96.7
MS.gene53435.t1 AT4G34131 27.719 285 182 10 57 319 199 481 6.95e-22 96.3
MS.gene53435.t1 AT5G26310 29.008 262 146 6 70 300 188 440 1.33e-21 95.5
MS.gene53435.t1 AT2G15480 31.698 265 140 9 80 307 224 484 1.86e-21 95.1
MS.gene53435.t1 AT3G21760 29.630 243 148 6 80 302 218 457 2.08e-21 94.7
MS.gene53435.t1 AT3G16520 29.524 210 132 5 103 301 237 441 2.37e-21 94.4
MS.gene53435.t1 AT3G16520 29.524 210 132 5 103 301 237 441 2.61e-21 94.4
MS.gene53435.t1 AT5G17050 32.057 209 127 6 95 303 241 434 2.68e-21 94.4
MS.gene53435.t1 AT5G54060 27.483 302 200 10 26 317 166 458 2.79e-21 94.4
MS.gene53435.t1 AT2G16890 29.070 258 156 9 60 303 200 444 2.84e-21 94.4
MS.gene53435.t1 AT5G66690 29.317 249 142 5 77 300 201 440 2.90e-21 94.4
MS.gene53435.t1 AT3G16520 29.524 210 132 5 103 301 237 441 3.10e-21 94.4
MS.gene53435.t1 AT2G18560 31.148 244 139 6 78 300 116 351 3.66e-21 93.2
MS.gene53435.t1 AT4G15280 30.769 273 144 11 80 318 213 474 3.74e-21 94.0
MS.gene53435.t1 AT4G15280 30.769 273 144 11 80 318 245 506 4.01e-21 94.0
MS.gene53435.t1 AT2G29750 38.889 162 90 7 129 282 273 433 6.04e-21 93.6
MS.gene53435.t1 AT4G34135 30.055 183 122 3 80 257 225 406 8.98e-21 92.8
MS.gene53435.t1 AT3G21780 32.645 242 140 9 80 302 208 445 1.19e-20 92.4
MS.gene53435.t1 AT2G15480 30.037 273 144 7 80 307 224 494 1.28e-20 92.4
MS.gene53435.t1 AT4G15500 31.111 225 147 7 80 298 213 435 2.00e-20 92.0
MS.gene53435.t1 AT1G07260 31.489 235 143 9 80 302 220 448 2.15e-20 91.7
MS.gene53435.t1 AT3G53160 29.773 309 176 11 30 315 176 466 2.58e-20 91.7
MS.gene53435.t1 AT4G34138 30.040 253 147 10 80 309 224 469 3.41e-20 91.3
MS.gene53435.t1 AT2G29730 31.667 180 117 4 129 304 264 441 5.10e-20 90.5
MS.gene53435.t1 AT2G36970 31.792 173 112 4 133 302 278 447 5.77e-20 90.5
MS.gene53435.t1 AT1G05675 26.407 231 157 6 77 299 201 426 9.88e-20 89.7
MS.gene53435.t1 AT5G03490 29.134 254 146 8 45 282 192 427 2.39e-19 88.6
MS.gene53435.t1 AT2G29710 29.572 257 168 8 56 304 190 441 2.94e-19 88.6
MS.gene53435.t1 AT1G01390 31.658 199 118 2 132 312 260 458 6.58e-19 87.4
MS.gene53435.t1 AT1G01390 31.658 199 118 2 132 312 277 475 6.85e-19 87.4
MS.gene53435.t1 AT5G59590 31.429 210 131 5 99 304 228 428 7.65e-19 87.0
MS.gene53435.t1 AT2G31750 25.000 256 173 9 78 319 202 452 9.42e-19 87.0
MS.gene53435.t1 AT2G31750 25.000 256 173 9 78 319 202 452 1.10e-18 87.0
MS.gene53435.t1 AT5G12890 29.675 246 149 9 75 304 221 458 1.60e-18 86.3
MS.gene53435.t1 AT1G22400 33.333 174 107 5 133 303 291 458 2.86e-18 85.5
MS.gene53435.t1 AT1G22360 26.910 301 195 10 26 312 174 463 3.16e-18 85.5
MS.gene53435.t1 AT2G36780 33.690 187 112 5 80 256 224 408 3.32e-18 85.5
MS.gene53435.t1 AT1G10400 29.474 190 123 4 117 303 258 439 3.79e-18 85.1
MS.gene53435.t1 AT5G17030 30.409 171 113 3 133 303 269 433 4.06e-18 85.1
MS.gene53435.t1 AT2G36800 36.719 128 77 1 133 256 280 407 4.26e-18 85.1
MS.gene53435.t1 AT3G46670 28.400 250 157 8 80 318 207 445 4.37e-18 85.1
MS.gene53435.t1 AT3G21750 29.388 245 143 8 80 300 205 443 5.12e-18 84.7
MS.gene53435.t1 AT2G43840 27.706 231 151 8 77 297 194 418 6.94e-18 84.3
MS.gene53435.t1 AT2G30140 25.275 273 183 10 55 318 187 447 8.29e-18 84.0
MS.gene53435.t1 AT2G30140 25.275 273 183 10 55 318 188 448 8.56e-18 84.0
MS.gene53435.t1 AT2G43840 27.706 231 151 8 77 297 194 418 9.03e-18 84.0
MS.gene53435.t1 AT4G15480 27.632 228 151 5 80 297 227 450 9.22e-18 84.0
MS.gene53435.t1 AT2G43820 27.778 234 151 8 77 299 194 420 9.65e-18 84.0
MS.gene53435.t1 AT2G36760 31.217 189 114 5 80 256 224 408 1.52e-17 83.6
MS.gene53435.t1 AT1G22340 25.817 306 195 11 36 322 187 479 2.39e-17 82.8
MS.gene53435.t1 AT2G36770 31.016 187 117 4 80 256 224 408 3.58e-17 82.4
MS.gene53435.t1 AT1G22360 28.094 299 189 11 26 304 174 466 3.92e-17 82.0
MS.gene53435.t1 AT1G07240 37.324 142 83 3 127 263 268 408 3.96e-17 82.0
MS.gene53435.t1 AT2G29740 32.812 192 116 5 80 263 225 411 5.26e-17 81.6
MS.gene53435.t1 AT5G17040 29.825 171 114 3 133 303 253 417 6.14e-17 81.6
MS.gene53435.t1 AT5G17040 29.651 172 115 3 132 303 150 315 7.20e-17 80.5
MS.gene53435.t1 AT1G73880 32.824 131 85 1 130 257 270 400 8.35e-17 81.3
MS.gene53435.t1 AT2G16890 28.700 223 136 8 60 272 200 409 1.11e-16 80.5
MS.gene53435.t1 AT2G30150 28.627 255 158 9 80 321 197 440 1.21e-16 80.5
MS.gene53435.t1 AT5G59580 27.381 252 165 7 76 318 202 444 1.49e-16 80.5
MS.gene53435.t1 AT2G30150 28.627 255 158 9 80 321 213 456 1.53e-16 80.5
MS.gene53435.t1 AT2G23260 28.017 232 156 6 80 303 203 431 1.63e-16 80.5
MS.gene53435.t1 AT2G23250 27.155 232 159 5 80 306 190 416 2.55e-16 79.7
MS.gene53435.t1 AT2G36750 32.022 178 109 4 80 247 219 394 2.70e-16 79.7
MS.gene53435.t1 AT1G22380 26.370 292 190 9 26 303 177 457 4.86e-16 79.0
MS.gene53435.t1 AT2G28080 32.680 153 98 3 133 282 281 431 4.98e-16 79.0
MS.gene53435.t1 AT5G38040 27.668 253 161 8 80 321 208 449 5.83e-16 78.6
MS.gene53435.t1 AT1G78270 30.058 173 115 4 133 303 289 457 6.92e-16 78.6
MS.gene53435.t1 AT5G05880 27.717 184 122 4 133 311 257 434 1.01e-15 77.8
MS.gene53435.t1 AT5G38010 29.098 244 136 10 73 297 200 425 1.14e-15 77.8
MS.gene53435.t1 AT2G26480 31.068 206 122 7 101 297 223 417 1.73e-15 77.4
MS.gene53435.t1 AT1G24100 28.384 229 143 7 106 317 234 458 1.80e-15 77.0
MS.gene53435.t1 AT5G05870 26.316 228 148 8 80 298 211 427 5.76e-15 75.9
MS.gene53435.t1 AT3G46660 26.407 231 151 6 101 322 236 456 7.36e-15 75.5
MS.gene53435.t1 AT2G36790 36.719 128 77 1 133 256 280 407 1.34e-14 74.7
MS.gene53435.t1 AT1G06000 29.442 197 109 5 129 295 229 425 2.78e-14 73.6
MS.gene53435.t1 AT3G11340 29.319 191 102 5 132 295 252 436 6.44e-14 72.4
MS.gene53435.t1 AT5G05860 29.240 171 110 5 133 298 256 420 1.34e-13 71.6
MS.gene53435.t1 AT3G46700 29.341 167 107 4 133 294 253 413 1.62e-13 71.2
MS.gene53435.t1 AT5G05890 28.191 188 116 4 133 311 261 438 2.03e-13 70.9
MS.gene53435.t1 AT3G46680 26.754 228 151 6 76 297 204 421 2.20e-13 70.9
MS.gene53435.t1 AT3G46650 27.363 201 128 6 133 321 241 435 2.58e-13 70.5
MS.gene53435.t1 AT3G21560 22.957 257 177 6 80 321 222 472 2.80e-13 70.9
MS.gene53435.t1 AT4G14090 28.384 229 143 9 80 299 213 429 3.66e-13 70.1
MS.gene53435.t1 AT3G46690 28.492 179 105 5 76 242 203 370 4.74e-13 70.1
MS.gene53435.t1 AT1G05560 25.781 256 166 8 80 316 250 500 8.58e-13 69.3
MS.gene53435.t1 AT1G05560 25.781 256 166 8 80 316 200 450 9.21e-13 68.9
MS.gene53435.t1 AT3G55710 29.586 169 113 4 93 256 222 389 1.21e-12 68.6
MS.gene53435.t1 AT1G22370 24.918 305 192 11 36 316 12 303 3.30e-12 66.6
MS.gene53435.t1 AT3G46720 25.743 202 132 5 99 297 226 412 3.61e-12 67.4
MS.gene53435.t1 AT1G22370 24.918 305 192 11 36 316 182 473 4.11e-12 67.0
MS.gene53435.t1 AT5G37950 30.952 168 91 7 91 247 198 351 1.41e-11 65.1
MS.gene53435.t1 AT5G37950 30.952 168 91 7 91 247 192 345 1.43e-11 65.1
MS.gene53435.t1 AT5G05900 26.923 182 109 6 133 295 263 439 2.60e-11 64.7
MS.gene53435.t1 AT3G02100 27.027 185 97 7 133 304 279 438 3.29e-11 64.3

Find 82 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCATTGAGATGCTTAATTT+TGG 0.120179 3.2:-33567855 MS.gene53435:CDS
GCTCTTGGAATCGAGCTTTC+TGG 0.144798 3.2:-33568053 MS.gene53435:CDS
ATGTCTTCCGCCGTTAAATT+TGG 0.249812 3.2:+33568467 None:intergenic
CTTCAACATCTCTTATTTGC+AGG 0.281458 3.2:+33568201 None:intergenic
CCAAACAGTACCACGGTCTT+TGG 0.284498 3.2:+33567956 None:intergenic
TTTCTGGGTTACCTTTCTTT+TGG 0.292501 3.2:-33568037 MS.gene53435:CDS
ACATTTGTGGTCCACCAAAT+TGG 0.306616 3.2:-33568448 MS.gene53435:CDS
TGCTCCAAGCTGGGGTTATC+TGG 0.319120 3.2:+33568525 None:intergenic
CCATCATCTGTTCTGTTCAT+AGG 0.319211 3.2:-33568122 MS.gene53435:CDS
ATCTGTTCTGTTCATAGGAT+TGG 0.343144 3.2:-33568117 MS.gene53435:CDS
CTCTTGGAATCGAGCTTTCT+GGG 0.354413 3.2:-33568052 MS.gene53435:CDS
CTAATTCAGTTAGATCTTGT+TGG 0.356923 3.2:+33568075 None:intergenic
CTTTGATCCACCTAAGGATA+AGG 0.375321 3.2:-33568495 MS.gene53435:CDS
GCACGTTCTTGTTAACCTTC+CGG 0.377522 3.2:-33567832 MS.gene53435:CDS
AGTTGATTATAATCAAAATC+AGG 0.388002 3.2:+33568341 None:intergenic
GGCACCTCAACGGAAGATAT+TGG 0.399583 3.2:-33567925 MS.gene53435:CDS
ATATTGGCTGATGCGGCAAT+TGG 0.400336 3.2:-33567909 MS.gene53435:CDS
ATGAAGAAAACAACCCTGAT+TGG 0.404305 3.2:-33568178 MS.gene53435:CDS
CCAAAGACCGTGGTACTGTT+TGG 0.405274 3.2:-33567956 MS.gene53435:CDS
GGTACATTTGAATTACCATA+TGG 0.418070 3.2:-33567993 MS.gene53435:CDS
TAGATCTTGTTGGCTAAGCC+TGG 0.419179 3.2:+33568085 None:intergenic
TCTGTTCTGTTCATAGGATT+GGG 0.424084 3.2:-33568116 MS.gene53435:CDS
TATTGGCTGATGCGGCAATT+GGG 0.434541 3.2:-33567908 MS.gene53435:CDS
TGAATTACCATATGGATTTG+AGG 0.438114 3.2:-33567985 MS.gene53435:CDS
GATCTAACTGAATTAGCTCT+TGG 0.438358 3.2:-33568068 MS.gene53435:CDS
TTTGGCTTGACCTTATCCTT+AGG 0.439765 3.2:+33568485 None:intergenic
AGACATTGATCTAGCAAATC+CGG 0.453531 3.2:+33567813 None:intergenic
GTTCTATCCTCAAATCCATA+TGG 0.454878 3.2:+33567978 None:intergenic
AAGAAACATATGCTCCAAGC+TGG 0.465786 3.2:+33568515 None:intergenic
AAAGAGATGAGCAAGGTTAT+CGG 0.468485 3.2:-33567645 MS.gene53435:CDS
AGCAACCCCACTGGAACCAC+AGG 0.473461 3.2:+33568233 None:intergenic
GTGAAAATCAAGACATGGTT+GGG 0.476623 3.2:-33568155 MS.gene53435:CDS
ACATCTCTTATTTGCAGGGA+TGG 0.477539 3.2:+33568206 None:intergenic
TGAAGAAAACAACCCTGATT+GGG 0.479948 3.2:-33568177 MS.gene53435:CDS
TAGGATTGGGCAGCGAGTCC+AGG 0.485408 3.2:-33568103 MS.gene53435:CDS
GGCTTGACCTTATCCTTAGG+TGG 0.485820 3.2:+33568488 None:intergenic
AATGCTCTAATAATCTCATA+AGG 0.486118 3.2:+33568395 None:intergenic
GGAAGATGGGTCACTTACTA+AGG 0.486216 3.2:-33567736 MS.gene53435:CDS
ATTGGCTGATGCGGCAATTG+GGG 0.492288 3.2:-33567907 MS.gene53435:CDS
TAAGGTCAAGCCAAATTTAA+CGG 0.494570 3.2:-33568477 MS.gene53435:CDS
AGAAAAGAATGTAGCTATTG+AGG 0.495755 3.2:-33567772 MS.gene53435:CDS
TTCAACATCTCTTATTTGCA+GGG 0.503989 3.2:+33568202 None:intergenic
ATGTTTCTTTGATCCACCTA+AGG 0.509284 3.2:-33568501 MS.gene53435:CDS
TTAACGGCGGAAGACATTTG+TGG 0.515924 3.2:-33568461 MS.gene53435:CDS
GACCCATCTTCCTCACTCCT+TGG 0.516746 3.2:+33567747 None:intergenic
CTCAGCTCTTAAAGACGAGT+CGG 0.520788 3.2:-33568372 MS.gene53435:CDS
TTTACCAGATAACCCCAGCT+TGG 0.520805 3.2:-33568529 MS.gene53435:CDS
GTGGTACTGTTTGGAAAACA+TGG 0.534627 3.2:-33567947 MS.gene53435:CDS
TTGAAAGGAAGCCAATTTGG+TGG 0.536102 3.2:+33568437 None:intergenic
GGTGAAAATCAAGACATGGT+TGG 0.539378 3.2:-33568156 MS.gene53435:CDS
CTAGAGAACTTGAGGCAGAA+TGG 0.541461 3.2:-33568283 MS.gene53435:CDS
TACCAAGGAGTGAGGAAGAT+GGG 0.543111 3.2:-33567749 MS.gene53435:CDS
CCTATGAACAGAACAGATGA+TGG 0.550040 3.2:+33568122 None:intergenic
AACGTGCCTGTGGTTCCAGT+GGG 0.554315 3.2:-33568239 MS.gene53435:CDS
GTACCAAGGAGTGAGGAAGA+TGG 0.559085 3.2:-33567750 MS.gene53435:CDS
TCTCTTATTTGCAGGGATGG+TGG 0.563649 3.2:+33568209 None:intergenic
AGAAACATATGCTCCAAGCT+GGG 0.567837 3.2:+33568516 None:intergenic
TCAGCTCTTAAAGACGAGTC+GGG 0.567866 3.2:-33568371 MS.gene53435:CDS
GAACGTGCCTGTGGTTCCAG+TGG 0.580508 3.2:-33568240 MS.gene53435:CDS
TGTAGCACAAACGTTGAGGT+TGG 0.582590 3.2:-33567709 MS.gene53435:CDS
GGAAAACATGGGCACCTCAA+CGG 0.588382 3.2:-33567935 MS.gene53435:CDS
TTGGCTGATGCGGCAATTGG+GGG 0.590327 3.2:-33567906 MS.gene53435:CDS
TTCTGCCTCAAGTTCTCTAG+AGG 0.591066 3.2:+33568286 None:intergenic
GATGGTGGAAGCAACCCCAC+TGG 0.591159 3.2:+33568224 None:intergenic
ACGGAAGATATTGGCTGATG+CGG 0.597377 3.2:-33567916 MS.gene53435:CDS
AAGAACCTCTAGAGAACTTG+AGG 0.597416 3.2:-33568291 MS.gene53435:CDS
GAGGTTGGCAATAGTTCATG+AGG 0.613513 3.2:-33567694 MS.gene53435:CDS
GAAACATATGCTCCAAGCTG+GGG 0.622470 3.2:+33568517 None:intergenic
CTCTTACATGAACGTGCCTG+TGG 0.622831 3.2:-33568249 MS.gene53435:CDS
GTTGGCAATAGTTCATGAGG+AGG 0.649153 3.2:-33567691 MS.gene53435:CDS
ATGTAGCTATTGAGGTACCA+AGG 0.657055 3.2:-33567764 MS.gene53435:CDS
TATTGAGGTACCAAGGAGTG+AGG 0.657416 3.2:-33567757 MS.gene53435:CDS
TCAGCCAATATCTTCCGTTG+AGG 0.660112 3.2:+33567921 None:intergenic
TTGGCAATAGTTCATGAGGA+GGG 0.663002 3.2:-33567690 MS.gene53435:CDS
TGGTACTGTTTGGAAAACAT+GGG 0.672461 3.2:-33567946 MS.gene53435:CDS
ATTGATCTAGCAAATCCGGA+AGG 0.695349 3.2:+33567817 None:intergenic
CAACGCAAAAGAGATGAGCA+AGG 0.695920 3.2:-33567652 MS.gene53435:CDS
AAAGTGTAGCACAAACGTTG+AGG 0.696867 3.2:-33567713 MS.gene53435:CDS
GGTCAAGCCAAATTTAACGG+CGG 0.720602 3.2:-33568474 MS.gene53435:CDS
GAGGATAGAACCAAAGACCG+TGG 0.733010 3.2:-33567966 MS.gene53435:CDS
ATTGGGTGAAAATCAAGACA+TGG 0.744368 3.2:-33568160 MS.gene53435:CDS
ACGTGCCTGTGGTTCCAGTG+GGG 0.775314 3.2:-33568238 MS.gene53435:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTTTAAAAAATCTAAAAGA+GGG - chr3.2:33568113-33568132 MS.gene53435:CDS 15.0%
!! AGTTGATTATAATCAAAATC+AGG + chr3.2:33567789-33567808 None:intergenic 20.0%
!!! GTCTTTAAAAAATCTAAAAG+AGG - chr3.2:33568112-33568131 MS.gene53435:CDS 20.0%
!!! TTTTTTAAAGACCAAAAGAA+AGG + chr3.2:33568104-33568123 None:intergenic 20.0%
! AATGCTCTAATAATCTCATA+AGG + chr3.2:33567735-33567754 None:intergenic 25.0%
!! TCATTGAGATGCTTAATTTT+GGG - chr3.2:33568273-33568292 MS.gene53435:CDS 25.0%
!!! AGATGAATAGTTGTTTTGAA+AGG + chr3.2:33567708-33567727 None:intergenic 25.0%
AGAAAAGAATGTAGCTATTG+AGG - chr3.2:33568355-33568374 MS.gene53435:CDS 30.0%
CTAATTCAGTTAGATCTTGT+TGG + chr3.2:33568055-33568074 None:intergenic 30.0%
GGTACATTTGAATTACCATA+TGG - chr3.2:33568134-33568153 MS.gene53435:CDS 30.0%
TAAGGTCAAGCCAAATTTAA+CGG - chr3.2:33567650-33567669 MS.gene53435:CDS 30.0%
TGAATTACCATATGGATTTG+AGG - chr3.2:33568142-33568161 MS.gene53435:CDS 30.0%
! GTCATTGAGATGCTTAATTT+TGG - chr3.2:33568272-33568291 MS.gene53435:CDS 30.0%
! TTCAACATCTCTTATTTGCA+GGG + chr3.2:33567928-33567947 None:intergenic 30.0%
AAAGAGATGAGCAAGGTTAT+CGG - chr3.2:33568482-33568501 MS.gene53435:CDS 35.0%
AGACATTGATCTAGCAAATC+CGG + chr3.2:33568317-33568336 None:intergenic 35.0%
ATCTGTTCTGTTCATAGGAT+TGG - chr3.2:33568010-33568029 MS.gene53435:CDS 35.0%
ATGAAGAAAACAACCCTGAT+TGG - chr3.2:33567949-33567968 MS.gene53435:CDS 35.0%
ATGTTTCTTTGATCCACCTA+AGG - chr3.2:33567626-33567645 MS.gene53435:CDS 35.0%
ATTGGGTGAAAATCAAGACA+TGG - chr3.2:33567967-33567986 MS.gene53435:CDS 35.0%
GTGAAAATCAAGACATGGTT+GGG - chr3.2:33567972-33567991 MS.gene53435:CDS 35.0%
GTTCTATCCTCAAATCCATA+TGG + chr3.2:33568152-33568171 None:intergenic 35.0%
TCTGTTCTGTTCATAGGATT+GGG - chr3.2:33568011-33568030 MS.gene53435:CDS 35.0%
TGAAGAAAACAACCCTGATT+GGG - chr3.2:33567950-33567969 MS.gene53435:CDS 35.0%
TGGTACTGTTTGGAAAACAT+GGG - chr3.2:33568181-33568200 MS.gene53435:CDS 35.0%
! ATGTTTTCCAAACAGTACCA+CGG + chr3.2:33568181-33568200 None:intergenic 35.0%
! CTTCAACATCTCTTATTTGC+AGG + chr3.2:33567929-33567948 None:intergenic 35.0%
! GATCTAACTGAATTAGCTCT+TGG - chr3.2:33568059-33568078 MS.gene53435:CDS 35.0%
! TCTTGATTTTCACCCAATCA+GGG + chr3.2:33567965-33567984 None:intergenic 35.0%
! TTTCTGGGTTACCTTTCTTT+TGG - chr3.2:33568090-33568109 MS.gene53435:CDS 35.0%
!!! GTTTTGAAAGGAAGCCAATT+TGG + chr3.2:33567696-33567715 None:intergenic 35.0%
AAAGTGTAGCACAAACGTTG+AGG - chr3.2:33568414-33568433 MS.gene53435:CDS 40.0%
AAGAAACATATGCTCCAAGC+TGG + chr3.2:33567615-33567634 None:intergenic 40.0%
ACATTTGTGGTCCACCAAAT+TGG - chr3.2:33567679-33567698 MS.gene53435:CDS 40.0%
AGAAACATATGCTCCAAGCT+GGG + chr3.2:33567614-33567633 None:intergenic 40.0%
ATGTCTTCCGCCGTTAAATT+TGG + chr3.2:33567663-33567682 None:intergenic 40.0%
ATTGATCTAGCAAATCCGGA+AGG + chr3.2:33568313-33568332 None:intergenic 40.0%
CCATCATCTGTTCTGTTCAT+AGG - chr3.2:33568005-33568024 MS.gene53435:CDS 40.0%
CCTATGAACAGAACAGATGA+TGG + chr3.2:33568008-33568027 None:intergenic 40.0%
CTTTGATCCACCTAAGGATA+AGG - chr3.2:33567632-33567651 MS.gene53435:CDS 40.0%
GGTGAAAATCAAGACATGGT+TGG - chr3.2:33567971-33567990 MS.gene53435:CDS 40.0%
GTGGTACTGTTTGGAAAACA+TGG - chr3.2:33568180-33568199 MS.gene53435:CDS 40.0%
TTGAAAGGAAGCCAATTTGG+TGG + chr3.2:33567693-33567712 None:intergenic 40.0%
TTGGCAATAGTTCATGAGGA+GGG - chr3.2:33568437-33568456 MS.gene53435:CDS 40.0%
! AAGAACCTCTAGAGAACTTG+AGG - chr3.2:33567836-33567855 MS.gene53435:CDS 40.0%
! ACATCTCTTATTTGCAGGGA+TGG + chr3.2:33567924-33567943 None:intergenic 40.0%
! ATGTAGCTATTGAGGTACCA+AGG - chr3.2:33568363-33568382 MS.gene53435:CDS 40.0%
! GTCTTGATTTTCACCCAATC+AGG + chr3.2:33567966-33567985 None:intergenic 40.0%
!! TTTGGCTTGACCTTATCCTT+AGG + chr3.2:33567645-33567664 None:intergenic 40.0%
CAACGCAAAAGAGATGAGCA+AGG - chr3.2:33568475-33568494 MS.gene53435:CDS 45.0%
CTAGAGAACTTGAGGCAGAA+TGG - chr3.2:33567844-33567863 MS.gene53435:CDS 45.0%
CTCAGCTCTTAAAGACGAGT+CGG - chr3.2:33567755-33567774 MS.gene53435:CDS 45.0%
CTCTTGGAATCGAGCTTTCT+GGG - chr3.2:33568075-33568094 MS.gene53435:CDS 45.0%
GAAACATATGCTCCAAGCTG+GGG + chr3.2:33567613-33567632 None:intergenic 45.0%
GAGGTTGGCAATAGTTCATG+AGG - chr3.2:33568433-33568452 MS.gene53435:CDS 45.0%
GCACGTTCTTGTTAACCTTC+CGG - chr3.2:33568295-33568314 MS.gene53435:CDS 45.0%
GGAAGATGGGTCACTTACTA+AGG - chr3.2:33568391-33568410 MS.gene53435:CDS 45.0%
GGTCAAGCCAAATTTAACGG+CGG - chr3.2:33567653-33567672 MS.gene53435:CDS 45.0%
GTTGGCAATAGTTCATGAGG+AGG - chr3.2:33568436-33568455 MS.gene53435:CDS 45.0%
TACCAAGGAGTGAGGAAGAT+GGG - chr3.2:33568378-33568397 MS.gene53435:CDS 45.0%
TCAGCCAATATCTTCCGTTG+AGG + chr3.2:33568209-33568228 None:intergenic 45.0%
TCAGCTCTTAAAGACGAGTC+GGG - chr3.2:33567756-33567775 MS.gene53435:CDS 45.0%
TGTAGCACAAACGTTGAGGT+TGG - chr3.2:33568418-33568437 MS.gene53435:CDS 45.0%
TTAACGGCGGAAGACATTTG+TGG - chr3.2:33567666-33567685 MS.gene53435:CDS 45.0%
TTCTGCCTCAAGTTCTCTAG+AGG + chr3.2:33567844-33567863 None:intergenic 45.0%
TTTACCAGATAACCCCAGCT+TGG - chr3.2:33567598-33567617 MS.gene53435:CDS 45.0%
! ACGGAAGATATTGGCTGATG+CGG - chr3.2:33568211-33568230 MS.gene53435:CDS 45.0%
! ATATTGGCTGATGCGGCAAT+TGG - chr3.2:33568218-33568237 MS.gene53435:CDS 45.0%
! TAGATCTTGTTGGCTAAGCC+TGG + chr3.2:33568045-33568064 None:intergenic 45.0%
! TATTGAGGTACCAAGGAGTG+AGG - chr3.2:33568370-33568389 MS.gene53435:CDS 45.0%
! TATTGGCTGATGCGGCAATT+GGG - chr3.2:33568219-33568238 MS.gene53435:CDS 45.0%
! TCTCTTATTTGCAGGGATGG+TGG + chr3.2:33567921-33567940 None:intergenic 45.0%
ATTGGCTGATGCGGCAATTG+GGG - chr3.2:33568220-33568239 MS.gene53435:CDS 50.0%
CCAAACAGTACCACGGTCTT+TGG + chr3.2:33568174-33568193 None:intergenic 50.0%
CCAAAGACCGTGGTACTGTT+TGG - chr3.2:33568171-33568190 MS.gene53435:CDS 50.0%
CTCTTACATGAACGTGCCTG+TGG - chr3.2:33567878-33567897 MS.gene53435:CDS 50.0%
GAGGATAGAACCAAAGACCG+TGG - chr3.2:33568161-33568180 MS.gene53435:CDS 50.0%
GCTCTTGGAATCGAGCTTTC+TGG - chr3.2:33568074-33568093 MS.gene53435:CDS 50.0%
GGAAAACATGGGCACCTCAA+CGG - chr3.2:33568192-33568211 MS.gene53435:CDS 50.0%
GGCACCTCAACGGAAGATAT+TGG - chr3.2:33568202-33568221 MS.gene53435:CDS 50.0%
GGCTTGACCTTATCCTTAGG+TGG + chr3.2:33567642-33567661 None:intergenic 50.0%
GGGGGTTGCATTTGTCATTG+TGG - chr3.2:33568239-33568258 MS.gene53435:CDS 50.0%
GTACCAAGGAGTGAGGAAGA+TGG - chr3.2:33568377-33568396 MS.gene53435:CDS 50.0%
AACGTGCCTGTGGTTCCAGT+GGG - chr3.2:33567888-33567907 MS.gene53435:CDS 55.0%
GACCCATCTTCCTCACTCCT+TGG + chr3.2:33568383-33568402 None:intergenic 55.0%
TGCTCCAAGCTGGGGTTATC+TGG + chr3.2:33567605-33567624 None:intergenic 55.0%
TTGGCTGATGCGGCAATTGG+GGG - chr3.2:33568221-33568240 MS.gene53435:CDS 55.0%
ACGTGCCTGTGGTTCCAGTG+GGG - chr3.2:33567889-33567908 MS.gene53435:CDS 60.0%
AGCAACCCCACTGGAACCAC+AGG + chr3.2:33567897-33567916 None:intergenic 60.0%
GAACGTGCCTGTGGTTCCAG+TGG - chr3.2:33567887-33567906 MS.gene53435:CDS 60.0%
TAGGATTGGGCAGCGAGTCC+AGG - chr3.2:33568024-33568043 MS.gene53435:CDS 60.0%
!! GATGGTGGAAGCAACCCCAC+TGG + chr3.2:33567906-33567925 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 33567591 33568558 33567591 ID=MS.gene53435
chr3.2 mRNA 33567591 33568558 33567591 ID=MS.gene53435.t1;Parent=MS.gene53435
chr3.2 exon 33567591 33568558 33567591 ID=MS.gene53435.t1.exon1;Parent=MS.gene53435.t1
chr3.2 CDS 33567591 33568558 33567591 ID=cds.MS.gene53435.t1;Parent=MS.gene53435.t1
Gene Sequence

>MS.gene53435

TGTGCTTTTTACCAGATAACCCCAGCTTGGAGCATATGTTTCTTTGATCCACCTAAGGATAAGGTCAAGCCAAATTTAACGGCGGAAGACATTTGTGGTCCACCAAATTGGCTTCCTTTCAAAACAACTATTCATCTCAAGCCTTATGAGATTATTAGAGCATTCTCAGCTCTTAAAGACGAGTCGGGAAAAATGCCTGATTTTGATTATAATCAACTAAATTCAAGTTGTGACATACTTCTTCTAAGAACCTCTAGAGAACTTGAGGCAGAATGGTTAGATTATGTCTCTTACATGAACGTGCCTGTGGTTCCAGTGGGGTTGCTTCCACCATCCCTGCAAATAAGAGATGTTGAAGATGAAGAAAACAACCCTGATTGGGTGAAAATCAAGACATGGTTGGGAACAAGAGAACCATCATCTGTTCTGTTCATAGGATTGGGCAGCGAGTCCAGGCTTAGCCAACAAGATCTAACTGAATTAGCTCTTGGAATCGAGCTTTCTGGGTTACCTTTCTTTTGGTCTTTAAAAAATCTAAAAGAGGGTACATTTGAATTACCATATGGATTTGAGGATAGAACCAAAGACCGTGGTACTGTTTGGAAAACATGGGCACCTCAACGGAAGATATTGGCTGATGCGGCAATTGGGGGTTGCATTTGTCATTGTGGTGCAAGTTCTGTCATTGAGATGCTTAATTTTGGGCACGTTCTTGTTAACCTTCCGGATTTGCTAGATCAATGTCTGTTTTCAAGAGCACTAGTAGAAAAGAATGTAGCTATTGAGGTACCAAGGAGTGAGGAAGATGGGTCACTTACTAAGGAAAGTGTAGCACAAACGTTGAGGTTGGCAATAGTTCATGAGGAGGGAAGTACTTATAGAAACAACGCAAAAGAGATGAGCAAGGTTATCGGTTCAAAAGATCTTCACAATCAGTACATTGAAGATTTCATTGCGATTCTTCATAA

Protein sequence

>MS.gene53435.t1

CAFYQITPAWSICFFDPPKDKVKPNLTAEDICGPPNWLPFKTTIHLKPYEIIRAFSALKDESGKMPDFDYNQLNSSCDILLLRTSRELEAEWLDYVSYMNVPVVPVGLLPPSLQIRDVEDEENNPDWVKIKTWLGTREPSSVLFIGLGSESRLSQQDLTELALGIELSGLPFFWSLKNLKEGTFELPYGFEDRTKDRGTVWKTWAPQRKILADAAIGGCICHCGASSVIEMLNFGHVLVNLPDLLDQCLFSRALVEKNVAIEVPRSEEDGSLTKESVAQTLRLAIVHEEGSTYRNNAKEMSKVIGSKDLHNQYIEDFIAILH