Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53464.t1 | XP_003613201.1 | 97.4 | 302 | 8 | 0 | 1 | 302 | 27 | 328 | 5.40E-171 | 610.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53464.t1 | G7K078 | 97.4 | 302 | 8 | 0 | 1 | 302 | 27 | 328 | 3.9e-171 | 610.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene53464 | 0.807216 | 5.63E-50 | -1.69E-46 |
| MS.gene049419 | MS.gene53464 | -0.824924 | 6.20E-54 | -1.69E-46 |
| MS.gene049983 | MS.gene53464 | 0.868166 | 7.99E-66 | -1.69E-46 |
| MS.gene050646 | MS.gene53464 | 0.826942 | 2.06E-54 | -1.69E-46 |
| MS.gene050654 | MS.gene53464 | 0.815272 | 1.01E-51 | -1.69E-46 |
| MS.gene050737 | MS.gene53464 | 0.827923 | 1.20E-54 | -1.69E-46 |
| MS.gene050941 | MS.gene53464 | 0.832622 | 8.51E-56 | -1.69E-46 |
| MS.gene051122 | MS.gene53464 | 0.839307 | 1.71E-57 | -1.69E-46 |
| MS.gene052674 | MS.gene53464 | 0.835904 | 1.28E-56 | -1.69E-46 |
| MS.gene052675 | MS.gene53464 | 0.830063 | 3.63E-55 | -1.69E-46 |
| MS.gene052677 | MS.gene53464 | 0.831553 | 1.56E-55 | -1.69E-46 |
| MS.gene05350 | MS.gene53464 | 0.817768 | 2.78E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene53464 | 0.800523 | 1.38E-48 | -1.69E-46 |
| MS.gene053726 | MS.gene53464 | 0.802263 | 6.10E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene53464 | 0.810869 | 9.30E-51 | -1.69E-46 |
| MS.gene056480 | MS.gene53464 | 0.819917 | 9.03E-53 | -1.69E-46 |
| MS.gene056699 | MS.gene53464 | 0.837632 | 4.64E-57 | -1.69E-46 |
| MS.gene05686 | MS.gene53464 | 0.804279 | 2.33E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene53464 | 0.82189 | 3.17E-53 | -1.69E-46 |
| MS.gene057371 | MS.gene53464 | 0.808457 | 3.07E-50 | -1.69E-46 |
| MS.gene058009 | MS.gene53464 | 0.803341 | 3.65E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene53464 | 0.801658 | 8.12E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene53464 | 0.844719 | 6.35E-59 | -1.69E-46 |
| MS.gene058095 | MS.gene53464 | 0.800505 | 1.40E-48 | -1.69E-46 |
| MS.gene058429 | MS.gene53464 | 0.800303 | 1.54E-48 | -1.69E-46 |
| MS.gene058781 | MS.gene53464 | 0.82743 | 1.57E-54 | -1.69E-46 |
| MS.gene058783 | MS.gene53464 | 0.82241 | 2.40E-53 | -1.69E-46 |
| MS.gene060259 | MS.gene53464 | 0.807128 | 5.88E-50 | -1.69E-46 |
| MS.gene060840 | MS.gene53464 | 0.811394 | 7.16E-51 | -1.69E-46 |
| MS.gene060850 | MS.gene53464 | 0.809425 | 1.90E-50 | -1.69E-46 |
| MS.gene060851 | MS.gene53464 | 0.819284 | 1.26E-52 | -1.69E-46 |
| MS.gene060852 | MS.gene53464 | 0.816844 | 4.48E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene53464 | 0.816164 | 6.37E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene53464 | 0.8354 | 1.72E-56 | -1.69E-46 |
| MS.gene060937 | MS.gene53464 | 0.828006 | 1.14E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene022308 | MS.gene53464 | PPI |
| MS.gene70636 | MS.gene53464 | PPI |
| MS.gene25973 | MS.gene53464 | PPI |
| MS.gene29367 | MS.gene53464 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53464.t1 | MTR_5g033940 | 97.351 | 302 | 8 | 0 | 1 | 302 | 27 | 328 | 0.0 | 607 |
| MS.gene53464.t1 | MTR_8g069820 | 63.072 | 306 | 107 | 2 | 1 | 302 | 42 | 345 | 2.43e-137 | 392 |
| MS.gene53464.t1 | MTR_8g069805 | 60.912 | 307 | 112 | 3 | 1 | 302 | 57 | 360 | 2.84e-132 | 380 |
| MS.gene53464.t1 | MTR_4g105600 | 50.814 | 307 | 142 | 4 | 4 | 302 | 45 | 350 | 2.20e-105 | 311 |
| MS.gene53464.t1 | MTR_3g077630 | 51.768 | 311 | 133 | 4 | 5 | 302 | 46 | 352 | 1.65e-100 | 299 |
| MS.gene53464.t1 | MTR_7g035095 | 49.498 | 299 | 139 | 5 | 1 | 299 | 31 | 317 | 1.55e-96 | 287 |
| MS.gene53464.t1 | MTR_1g086330 | 44.643 | 280 | 145 | 4 | 15 | 294 | 52 | 321 | 6.90e-74 | 230 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53464.t1 | AT1G70505 | 58.586 | 297 | 117 | 4 | 3 | 295 | 29 | 323 | 4.94e-119 | 345 |
| MS.gene53464.t1 | AT1G70505 | 58.586 | 297 | 117 | 4 | 3 | 295 | 55 | 349 | 5.88e-119 | 346 |
| MS.gene53464.t1 | AT1G10660 | 56.902 | 297 | 112 | 5 | 3 | 292 | 29 | 316 | 2.53e-109 | 320 |
| MS.gene53464.t1 | AT1G10660 | 56.902 | 297 | 112 | 5 | 3 | 292 | 29 | 316 | 2.53e-109 | 320 |
| MS.gene53464.t1 | AT1G10660 | 56.902 | 297 | 112 | 5 | 3 | 292 | 29 | 316 | 2.53e-109 | 320 |
| MS.gene53464.t1 | AT1G10660 | 56.902 | 297 | 112 | 5 | 3 | 292 | 29 | 316 | 2.53e-109 | 320 |
| MS.gene53464.t1 | AT5G62960 | 48.026 | 304 | 145 | 3 | 3 | 302 | 53 | 347 | 9.99e-100 | 296 |
| MS.gene53464.t1 | AT5G62960 | 46.617 | 266 | 129 | 3 | 3 | 264 | 53 | 309 | 2.69e-83 | 253 |
| MS.gene53464.t1 | AT3G27770 | 41.869 | 289 | 146 | 7 | 7 | 287 | 37 | 311 | 1.92e-73 | 228 |
| MS.gene53464.t1 | AT3G27770 | 43.678 | 261 | 130 | 6 | 39 | 291 | 21 | 272 | 5.89e-70 | 218 |
| MS.gene53464.t1 | AT1G70505 | 52.055 | 219 | 99 | 4 | 3 | 217 | 29 | 245 | 9.89e-69 | 214 |
| MS.gene53464.t1 | AT1G70505 | 52.036 | 221 | 100 | 4 | 3 | 219 | 55 | 273 | 1.47e-67 | 215 |
| MS.gene53464.t1 | AT2G47115 | 39.863 | 291 | 144 | 4 | 17 | 297 | 28 | 297 | 3.02e-59 | 191 |
Find 61 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTATTCAAATATTATTTC+AGG | 0.227394 | 5.3:-23049048 | MS.gene53464:intron |
| TTAAAGGAATTCATCCTAAT+TGG | 0.227419 | 5.3:-23050050 | MS.gene53464:CDS |
| TGCTCACTGACCTTGTATTC+TGG | 0.268288 | 5.3:-23047412 | MS.gene53464:CDS |
| AATATCCAGACGGAAGTCTT+TGG | 0.329675 | 5.3:+23047364 | None:intergenic |
| GCATGGAATACATGTGTTAA+AGG | 0.347362 | 5.3:-23050066 | MS.gene53464:CDS |
| ATAATGCACATTCCATGTTA+TGG | 0.360858 | 5.3:-23045691 | MS.gene53464:CDS |
| CTGTAAGCAAGCAACCAATT+AGG | 0.371298 | 5.3:+23050036 | None:intergenic |
| CATCACCATATGCACCCTTA+TGG | 0.375914 | 5.3:-23046199 | MS.gene53464:intron |
| GTTAAAGCAACTTCTATAGA+AGG | 0.385635 | 5.3:+23049223 | None:intergenic |
| TTAAATATGTAGACTTGTGC+AGG | 0.402756 | 5.3:-23047443 | MS.gene53464:intron |
| CTGGTTCTTGTCAGTTTCTA+CGG | 0.409172 | 5.3:-23045615 | MS.gene53464:CDS |
| TTTGGTCACTATTTACTTTG+CGG | 0.416580 | 5.3:-23049486 | MS.gene53464:intron |
| TCCATGCCGTTGTTTCGCTT+TGG | 0.416933 | 5.3:-23046329 | MS.gene53464:intron |
| TATGTGGCTCCAACTCTTGA+TGG | 0.421734 | 5.3:-23049155 | MS.gene53464:CDS |
| TAAGAGTTCGTATGCCAATC+AGG | 0.423869 | 5.3:-23049108 | MS.gene53464:CDS |
| GAACAGATGGACATTTACTT+TGG | 0.448713 | 5.3:-23049504 | MS.gene53464:intron |
| CTTTAACCACAAGGAATTTG+AGG | 0.453242 | 5.3:-23049207 | MS.gene53464:CDS |
| ACTGCTAATATAGTTGTTGA+TGG | 0.456333 | 5.3:-23049979 | MS.gene53464:CDS |
| ACATACCATAAGGGTGCATA+TGG | 0.457897 | 5.3:+23046194 | None:intergenic |
| GACAAATCAAGGAAAGGATA+AGG | 0.477562 | 5.3:+23046221 | None:intergenic |
| GTTAACGCTGTGCTCCTCCT+TGG | 0.480961 | 5.3:-23046529 | MS.gene53464:CDS |
| TGGTTGTCGAGATTGTTCTC+TGG | 0.487176 | 5.3:-23045634 | MS.gene53464:CDS |
| TTTAACCACAAGGAATTTGA+GGG | 0.490528 | 5.3:-23049206 | MS.gene53464:CDS |
| TCGATTGAGAGATTCCTGAT+TGG | 0.495840 | 5.3:+23049094 | None:intergenic |
| TCGAAATACAGCTGGTGTGT+GGG | 0.497509 | 5.3:-23049075 | MS.gene53464:CDS |
| GGAAGAAGGGCGACGAGAAA+CGG | 0.502040 | 5.3:-23050112 | MS.gene53464:CDS |
| AAGTCTTTGGATGTCATAAA+CGG | 0.506515 | 5.3:+23047377 | None:intergenic |
| CATATGGTGATGACAAATCA+AGG | 0.512911 | 5.3:+23046210 | None:intergenic |
| GACATCCAAAGACTTCCGTC+TGG | 0.516324 | 5.3:-23047369 | MS.gene53464:CDS |
| ATGTGGCTCCAACTCTTGAT+GGG | 0.523828 | 5.3:-23049154 | MS.gene53464:CDS |
| GAAATGAGAGGGTGGAAGAA+GGG | 0.524860 | 5.3:-23050125 | MS.gene53464:CDS |
| AAATAACAAGCCAGAATACA+AGG | 0.530867 | 5.3:+23047402 | None:intergenic |
| AGAAATGAGAGGGTGGAAGA+AGG | 0.535700 | 5.3:-23050126 | MS.gene53464:CDS |
| TTCAATTTGCAGTTCACCGT+TGG | 0.536989 | 5.3:-23046562 | MS.gene53464:intron |
| AAATATGCAAATCGAAACAC+TGG | 0.545569 | 5.3:+23046393 | None:intergenic |
| ATCGAAATACAGCTGGTGTG+TGG | 0.547035 | 5.3:-23049076 | MS.gene53464:CDS |
| TCTCTCAATCGAAATACAGC+TGG | 0.561952 | 5.3:-23049083 | MS.gene53464:CDS |
| GAAGGGCGACGAGAAACGGT+TGG | 0.569856 | 5.3:-23050108 | MS.gene53464:CDS |
| TCAGAAATCCCATCAAGAGT+TGG | 0.569985 | 5.3:+23049146 | None:intergenic |
| AATATAGTTGTTGATGGAGG+TGG | 0.572071 | 5.3:-23049973 | MS.gene53464:CDS |
| TGCTATATGAAGATGAAGCA+TGG | 0.572936 | 5.3:-23050083 | MS.gene53464:CDS |
| CGTTTCCCTCAAATTCCTTG+TGG | 0.579761 | 5.3:+23049201 | None:intergenic |
| AATTTAAGAACATACCATAA+GGG | 0.580153 | 5.3:+23046185 | None:intergenic |
| TACGAACTCTTAGATAAGAC+AGG | 0.588267 | 5.3:+23049119 | None:intergenic |
| CGAAATACAGCTGGTGTGTG+GGG | 0.596310 | 5.3:-23049074 | MS.gene53464:CDS |
| GGTGATGACAAATCAAGGAA+AGG | 0.602090 | 5.3:+23046215 | None:intergenic |
| TAGTGAAGTTGAAGCACTTG+TGG | 0.603098 | 5.3:-23045654 | MS.gene53464:CDS |
| TACAGAACGAGGCACTTATG+TGG | 0.604278 | 5.3:-23049171 | MS.gene53464:CDS |
| TCAGTAAATCAAGAAATGAG+AGG | 0.605968 | 5.3:-23050137 | MS.gene53464:CDS |
| CAGTAAATCAAGAAATGAGA+GGG | 0.619640 | 5.3:-23050136 | MS.gene53464:CDS |
| AATGCAAAGAAGCCATAACA+TGG | 0.621242 | 5.3:+23045679 | None:intergenic |
| TAGAAGTTGCTTTAACCACA+AGG | 0.639755 | 5.3:-23049216 | MS.gene53464:CDS |
| TAAATCAAGAAATGAGAGGG+TGG | 0.641595 | 5.3:-23050133 | MS.gene53464:CDS |
| ACCAAAGCGAAACAACGGCA+TGG | 0.646417 | 5.3:+23046328 | None:intergenic |
| CGAAACATCATTGAACTGCA+TGG | 0.659943 | 5.3:-23046506 | MS.gene53464:intron |
| AGTTCAATGATGTTTCGCCA+AGG | 0.672652 | 5.3:+23046512 | None:intergenic |
| TCAATGATGTTTCGCCAAGG+AGG | 0.685866 | 5.3:+23046515 | None:intergenic |
| GCTAATATAGTTGTTGATGG+AGG | 0.698631 | 5.3:-23049976 | MS.gene53464:CDS |
| GTTAACAGAGTGCATACCAA+CGG | 0.699109 | 5.3:+23046546 | None:intergenic |
| TTGTACTTACAATATCCAGA+CGG | 0.715608 | 5.3:+23047354 | None:intergenic |
| AACGCATTAGATACAGAACG+AGG | 0.781639 | 5.3:-23049182 | MS.gene53464:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATTCAAATATTATTTC+AGG | - | chr5.3:23046741-23046760 | MS.gene53464:intron | 10.0% |
| !!! | AAATTTAAAGTATATAATTG+AGG | + | chr5.3:23049343-23049362 | None:intergenic | 10.0% |
| !!! | TCTAATTTTATAAAAAAATG+TGG | + | chr5.3:23047692-23047711 | None:intergenic | 10.0% |
| !! | AAATATATGTCAAATATTAG+AGG | + | chr5.3:23049678-23049697 | None:intergenic | 15.0% |
| !! | ATATTTGACATATATTTCAA+CGG | - | chr5.3:23049681-23049700 | MS.gene53464:intron | 15.0% |
| !! | TATATAATATAACACCTTAA+AGG | - | chr5.3:23047412-23047431 | MS.gene53464:CDS | 15.0% |
| !!! | AAGCATATTATTTTTAAATC+TGG | - | chr5.3:23048109-23048128 | MS.gene53464:intron | 15.0% |
| !!! | AATTGTTTTATTGATTGAAA+AGG | - | chr5.3:23047019-23047038 | MS.gene53464:intron | 15.0% |
| !!! | AATTTTATTGTGTTATTAAC+TGG | - | chr5.3:23048282-23048301 | MS.gene53464:intron | 15.0% |
| !!! | AATTTTCAATTAGAACTTAA+AGG | + | chr5.3:23047127-23047146 | None:intergenic | 15.0% |
| !!! | AGCATATTATTTTTAAATCT+GGG | - | chr5.3:23048110-23048129 | MS.gene53464:intron | 15.0% |
| !!! | ATTACTCTTATTGATTTTAT+TGG | - | chr5.3:23046767-23046786 | MS.gene53464:intron | 15.0% |
| !!! | ATTTCTTCTTTTCTTTAATT+TGG | + | chr5.3:23047002-23047021 | None:intergenic | 15.0% |
| !!! | TCATTTTTAAAAAATCTAAC+TGG | + | chr5.3:23049909-23049928 | None:intergenic | 15.0% |
| !!! | TTTCTTCTTTTCTTTAATTT+GGG | + | chr5.3:23047001-23047020 | None:intergenic | 15.0% |
| !! | AAATTGGATATAATTGAAGA+TGG | - | chr5.3:23046944-23046963 | MS.gene53464:intron | 20.0% |
| !! | AATAGTATTTGATCAAATCA+TGG | - | chr5.3:23047730-23047749 | MS.gene53464:intron | 20.0% |
| !! | ATGATATCAATTTCAAAATG+CGG | - | chr5.3:23045992-23046011 | MS.gene53464:intron | 20.0% |
| !! | CAGCATATTTATAACAAAAA+GGG | + | chr5.3:23046241-23046260 | None:intergenic | 20.0% |
| !! | CATTAATTACAAATTTCATG+CGG | + | chr5.3:23049048-23049067 | None:intergenic | 20.0% |
| !! | CTAACAAAAGATATTTAGAT+TGG | - | chr5.3:23047277-23047296 | MS.gene53464:intron | 20.0% |
| !! | TAACCAATGAAATTGTTTAT+TGG | + | chr5.3:23046155-23046174 | None:intergenic | 20.0% |
| !! | TAGATTGGAGAAAAAAAAAT+GGG | - | chr5.3:23047292-23047311 | MS.gene53464:intron | 20.0% |
| !! | TATGTGCATACATTTAATTA+GGG | + | chr5.3:23048620-23048639 | None:intergenic | 20.0% |
| !! | TCAGCATATTTATAACAAAA+AGG | + | chr5.3:23046242-23046261 | None:intergenic | 20.0% |
| !! | TTAGATTGGAGAAAAAAAAA+TGG | - | chr5.3:23047291-23047310 | MS.gene53464:intron | 20.0% |
| !!! | AATTTCTTTTTTTGTGCTTT+TGG | - | chr5.3:23045779-23045798 | MS.gene53464:intron | 20.0% |
| !!! | AGAATTGATTTTAACATGTT+TGG | + | chr5.3:23048874-23048893 | None:intergenic | 20.0% |
| !!! | ATTAGTTTTGTGAAAGAAAT+TGG | - | chr5.3:23046928-23046947 | MS.gene53464:intron | 20.0% |
| !!! | ATTTCTTTTTTTGTGCTTTT+GGG | - | chr5.3:23045780-23045799 | MS.gene53464:intron | 20.0% |
| !!! | TATATTATCTATTGCTGATT+CGG | - | chr5.3:23049839-23049858 | MS.gene53464:intron | 20.0% |
| !!! | TCATTAACTTTTCATCATTA+AGG | + | chr5.3:23049091-23049110 | None:intergenic | 20.0% |
| !!! | TGATTTTGTGAAATTGATTA+TGG | - | chr5.3:23048705-23048724 | MS.gene53464:intron | 20.0% |
| !!! | TTCAAGTATAACTTTTGTTT+AGG | - | chr5.3:23046872-23046891 | MS.gene53464:intron | 20.0% |
| ! | AAAAAGAAATTCAACAAAGC+TGG | + | chr5.3:23047620-23047639 | None:intergenic | 25.0% |
| ! | AAAAGCAATAGAAAGAAGAT+GGG | + | chr5.3:23049499-23049518 | None:intergenic | 25.0% |
| ! | AAACATACATGAAAACTGTT+TGG | - | chr5.3:23048937-23048956 | MS.gene53464:intron | 25.0% |
| ! | AAAGGAGATATGTTATAGAA+AGG | - | chr5.3:23047037-23047056 | MS.gene53464:intron | 25.0% |
| ! | AAGACAGCAATATATTATAC+AGG | + | chr5.3:23045881-23045900 | None:intergenic | 25.0% |
| ! | AATTACTTGTATACTCTCAT+TGG | - | chr5.3:23047587-23047606 | MS.gene53464:intron | 25.0% |
| ! | CATACATTTAATTAGGGATT+AGG | + | chr5.3:23048614-23048633 | None:intergenic | 25.0% |
| ! | CGCATGAAATTTGTAATTAA+TGG | - | chr5.3:23049046-23049065 | MS.gene53464:intron | 25.0% |
| ! | CTATGTGCATACATTTAATT+AGG | + | chr5.3:23048621-23048640 | None:intergenic | 25.0% |
| ! | GGTCTTTATTACAAACAAAA+GGG | + | chr5.3:23047671-23047690 | None:intergenic | 25.0% |
| ! | GTTATTAACTGGTTAAACTT+GGG | - | chr5.3:23048293-23048312 | MS.gene53464:intron | 25.0% |
| ! | TACATATTATGTTATGGTCT+AGG | - | chr5.3:23049749-23049768 | MS.gene53464:intron | 25.0% |
| ! | TCAATTAGAACTTAAAGGTT+TGG | + | chr5.3:23047122-23047141 | None:intergenic | 25.0% |
| ! | TCTTTGCCAAGAAATTTAAT+TGG | - | chr5.3:23048007-23048026 | MS.gene53464:intron | 25.0% |
| ! | TGGTAGTACATATTATGTTA+TGG | - | chr5.3:23049743-23049762 | MS.gene53464:intron | 25.0% |
| ! | TGGTCTTTATTACAAACAAA+AGG | + | chr5.3:23047672-23047691 | None:intergenic | 25.0% |
| ! | TGTTATTAACTGGTTAAACT+TGG | - | chr5.3:23048292-23048311 | MS.gene53464:intron | 25.0% |
| ! | TTAAAGGAATTCATCCTAAT+TGG | - | chr5.3:23045739-23045758 | MS.gene53464:intron | 25.0% |
| ! | TTAGTAGTTTCATTCTTGTT+TGG | - | chr5.3:23048664-23048683 | MS.gene53464:intron | 25.0% |
| ! | TTCTGACCAATTAAATTTCT+TGG | + | chr5.3:23048016-23048035 | None:intergenic | 25.0% |
| ! | TTTACTCTGTTTGAAAGAAT+GGG | - | chr5.3:23047385-23047404 | MS.gene53464:CDS | 25.0% |
| !! | AATATCTTTTGTTAGAAACC+TGG | + | chr5.3:23047272-23047291 | None:intergenic | 25.0% |
| !! | AATGTATGCACATAGTTTTT+AGG | - | chr5.3:23048626-23048645 | MS.gene53464:intron | 25.0% |
| !! | ACTGATTAGATAAAGCTTTT+GGG | - | chr5.3:23048515-23048534 | MS.gene53464:intron | 25.0% |
| !! | ATGTATGCACATAGTTTTTA+GGG | - | chr5.3:23048627-23048646 | MS.gene53464:intron | 25.0% |
| !! | ATTTTCTAACCTTTTGTTAC+AGG | - | chr5.3:23049542-23049561 | MS.gene53464:intron | 25.0% |
| !! | GATTTGCATATTTTATCTTG+TGG | - | chr5.3:23049406-23049425 | MS.gene53464:intron | 25.0% |
| !! | TTTTACTCTGTTTGAAAGAA+TGG | - | chr5.3:23047384-23047403 | MS.gene53464:CDS | 25.0% |
| !!! | AATAACGGGTTGTTAAAATT+AGG | + | chr5.3:23047809-23047828 | None:intergenic | 25.0% |
| !!! | ATATTATCTATTGCTGATTC+GGG | - | chr5.3:23049840-23049859 | MS.gene53464:intron | 25.0% |
| !!! | ATTTGAGTATTGATGACTAA+TGG | + | chr5.3:23049630-23049649 | None:intergenic | 25.0% |
| !!! | GTAATTTTTTTCCTTTTGCA+TGG | + | chr5.3:23049656-23049675 | None:intergenic | 25.0% |
| !!! | TACTGATTAGATAAAGCTTT+TGG | - | chr5.3:23048514-23048533 | MS.gene53464:intron | 25.0% |
| !!! | TGCGTTTTTTTCATCTTTTT+GGG | - | chr5.3:23046367-23046386 | MS.gene53464:CDS | 25.0% |
| !!! | TGTTCGAATTTTTTGGTATA+TGG | + | chr5.3:23049958-23049977 | None:intergenic | 25.0% |
| !!! | TTCAGTTCTAAAAGAAATGT+CGG | - | chr5.3:23049159-23049178 | MS.gene53464:CDS | 25.0% |
| !!! | TTGCGTTTTTTTCATCTTTT+TGG | - | chr5.3:23046366-23046385 | MS.gene53464:CDS | 25.0% |
| AAAAGTTTGTCTGTTTGAGA+TGG | - | chr5.3:23047357-23047376 | MS.gene53464:intron | 30.0% | |
| AAAGCTAGTTGAAACCTTTA+AGG | + | chr5.3:23047429-23047448 | None:intergenic | 30.0% | |
| AAATAACAAGCCAGAATACA+AGG | + | chr5.3:23048390-23048409 | None:intergenic | 30.0% | |
| AAATATGCAAATCGAAACAC+TGG | + | chr5.3:23049399-23049418 | None:intergenic | 30.0% | |
| AAGTCTTTGGATGTCATAAA+CGG | + | chr5.3:23048415-23048434 | None:intergenic | 30.0% | |
| AAGTTAATGAAGATGCAGAA+AGG | - | chr5.3:23049101-23049120 | MS.gene53464:CDS | 30.0% | |
| ACAGTGCTATAACGTTATTA+CGG | + | chr5.3:23047876-23047895 | None:intergenic | 30.0% | |
| ACTGCTAATATAGTTGTTGA+TGG | - | chr5.3:23045810-23045829 | MS.gene53464:intron | 30.0% | |
| AGAATCAACAGAAAAAGAAG+AGG | - | chr5.3:23048579-23048598 | MS.gene53464:intron | 30.0% | |
| AGATATCGGAAGAAAAAAAG+TGG | + | chr5.3:23047920-23047939 | None:intergenic | 30.0% | |
| AGTAAGTAACTAAACTTCCA+AGG | - | chr5.3:23045951-23045970 | MS.gene53464:intron | 30.0% | |
| ATAATGCACATTCCATGTTA+TGG | - | chr5.3:23050098-23050117 | MS.gene53464:CDS | 30.0% | |
| ATGTTTGGATCAGTGATATA+GGG | - | chr5.3:23049864-23049883 | MS.gene53464:intron | 30.0% | |
| ATTCTGCTATATGCTTAGAT+TGG | - | chr5.3:23047968-23047987 | MS.gene53464:intron | 30.0% | |
| CAATGAAATTGTTTATTGGC+TGG | + | chr5.3:23046151-23046170 | None:intergenic | 30.0% | |
| CAGCCAATAAACAATTTCAT+TGG | - | chr5.3:23046149-23046168 | MS.gene53464:intron | 30.0% | |
| CAGTAAATCAAGAAATGAGA+GGG | - | chr5.3:23045653-23045672 | MS.gene53464:CDS | 30.0% | |
| CAGTGACTCAAACTTATTAA+GGG | - | chr5.3:23047560-23047579 | MS.gene53464:intron | 30.0% | |
| GAAAAGCAATAGAAAGAAGA+TGG | + | chr5.3:23049500-23049519 | None:intergenic | 30.0% | |
| GCATACAAATTTATGAACCT+TGG | + | chr5.3:23045971-23045990 | None:intergenic | 30.0% | |
| GCCTAAAAATCAAATTGTAG+AGG | - | chr5.3:23048801-23048820 | MS.gene53464:intron | 30.0% | |
| GCTGAAATTGAAATTAAGAG+TGG | + | chr5.3:23046531-23046550 | None:intergenic | 30.0% | |
| GTGTTGTAAATCACAGATAT+CGG | + | chr5.3:23047934-23047953 | None:intergenic | 30.0% | |
| GTTAAAGCAACTTCTATAGA+AGG | + | chr5.3:23046569-23046588 | None:intergenic | 30.0% | |
| TATCAATTTCAAAATGCGGA+CGG | - | chr5.3:23045996-23046015 | MS.gene53464:intron | 30.0% | |
| TATCTGTGATTTACAACACT+TGG | - | chr5.3:23047935-23047954 | MS.gene53464:intron | 30.0% | |
| TATGTTCATATACTCCATAG+AGG | - | chr5.3:23046438-23046457 | MS.gene53464:intron | 30.0% | |
| TATGTTTGGATCAGTGATAT+AGG | - | chr5.3:23049863-23049882 | MS.gene53464:intron | 30.0% | |
| TCAGTAAATCAAGAAATGAG+AGG | - | chr5.3:23045652-23045671 | MS.gene53464:CDS | 30.0% | |
| TCAGTGACTCAAACTTATTA+AGG | - | chr5.3:23047559-23047578 | MS.gene53464:intron | 30.0% | |
| TGAAAGAGATAAAAGCTGAT+AGG | - | chr5.3:23046973-23046992 | MS.gene53464:intron | 30.0% | |
| TGAGGAGAAATATAAGCAAA+AGG | + | chr5.3:23049325-23049344 | None:intergenic | 30.0% | |
| TGATTATGGCTAAAAGTGAT+TGG | - | chr5.3:23048719-23048738 | MS.gene53464:intron | 30.0% | |
| TGTGATTTCTTCATTTGGTT+GGG | - | chr5.3:23048476-23048495 | MS.gene53464:intron | 30.0% | |
| TTAAATATGTAGACTTGTGC+AGG | - | chr5.3:23048346-23048365 | MS.gene53464:intron | 30.0% | |
| TTGAACTGATACAAGTTTGT+TGG | - | chr5.3:23050040-23050059 | MS.gene53464:CDS | 30.0% | |
| TTGTACTTACAATATCCAGA+CGG | + | chr5.3:23048438-23048457 | None:intergenic | 30.0% | |
| TTTAACCACAAGGAATTTGA+GGG | - | chr5.3:23046583-23046602 | MS.gene53464:intron | 30.0% | |
| TTTGGTCACTATTTACTTTG+CGG | - | chr5.3:23046303-23046322 | MS.gene53464:intron | 30.0% | |
| ! | AAAGGGAAAGTACAACTAAA+AGG | + | chr5.3:23047654-23047673 | None:intergenic | 30.0% |
| ! | CTGATTAGATAAAGCTTTTG+GGG | - | chr5.3:23048516-23048535 | MS.gene53464:intron | 30.0% |
| ! | TATCAGCTTTTATCTCTTTC+AGG | + | chr5.3:23046974-23046993 | None:intergenic | 30.0% |
| ! | TGCATATTTTATCTTGTGGA+CGG | - | chr5.3:23049410-23049429 | MS.gene53464:intron | 30.0% |
| !! | CTACATTTGTGATTTTTCAG+TGG | - | chr5.3:23049433-23049452 | MS.gene53464:intron | 30.0% |
| !! | GCCTCTACAATTTGATTTTT+AGG | + | chr5.3:23048805-23048824 | None:intergenic | 30.0% |
| !! | GCTTAGGATCATTTTTGATA+TGG | - | chr5.3:23045616-23045635 | MS.gene53464:CDS | 30.0% |
| !! | TCTTTCTATTGCTTTTCAGT+TGG | - | chr5.3:23049503-23049522 | MS.gene53464:intron | 30.0% |
| !!! | AGGTTTCAACTAGCTTTTTA+AGG | - | chr5.3:23047432-23047451 | MS.gene53464:CDS | 30.0% |
| !!! | CACATTGAAACTTTTTTGAC+TGG | - | chr5.3:23049723-23049742 | MS.gene53464:intron | 30.0% |
| !!! | CGTTTTTTTCATCTTTTTGG+GGG | - | chr5.3:23046369-23046388 | MS.gene53464:CDS | 30.0% |
| !!! | GCGTTTTTTTCATCTTTTTG+GGG | - | chr5.3:23046368-23046387 | MS.gene53464:CDS | 30.0% |
| !!! | GTTTTTTTCATCTTTTTGGG+GGG | - | chr5.3:23046370-23046389 | MS.gene53464:CDS | 30.0% |
| !!! | TCGAATTTTTTGGTATATGG+TGG | + | chr5.3:23049955-23049974 | None:intergenic | 30.0% |
| !!! | TTCATTCTTGTTTGGTTTTG+CGG | - | chr5.3:23048672-23048691 | MS.gene53464:intron | 30.0% |
| AAAAATTCGAACACACCCTA+AGG | - | chr5.3:23049965-23049984 | MS.gene53464:CDS | 35.0% | |
| AAGCACAAATGCTTTCATGT+TGG | + | chr5.3:23048999-23049018 | None:intergenic | 35.0% | |
| AAGTAAATGTCCATCTGTTC+AGG | + | chr5.3:23046285-23046304 | None:intergenic | 35.0% | |
| AAGTGTGCTAAATAAGGAGT+CGG | + | chr5.3:23047231-23047250 | None:intergenic | 35.0% | |
| AATGCAAAGAAGCCATAACA+TGG | + | chr5.3:23050113-23050132 | None:intergenic | 35.0% | |
| ACTCAAATACACCATGCAAA+AGG | - | chr5.3:23049642-23049661 | MS.gene53464:intron | 35.0% | |
| AGAGAGTTAGAGAAGTGAAA+TGG | + | chr5.3:23046331-23046350 | None:intergenic | 35.0% | |
| ATTAACTGGTTAAACTTGGG+AGG | - | chr5.3:23048296-23048315 | MS.gene53464:intron | 35.0% | |
| CAAACACGTAATTGAGAATG+TGG | - | chr5.3:23046092-23046111 | MS.gene53464:intron | 35.0% | |
| CAACCAAATGAAGAAATCAC+AGG | + | chr5.3:23048477-23048496 | None:intergenic | 35.0% | |
| CATAACCAATTGTTGCCTTA+GGG | + | chr5.3:23049983-23050002 | None:intergenic | 35.0% | |
| CATACATGAAAACTGTTTGG+AGG | - | chr5.3:23048940-23048959 | MS.gene53464:intron | 35.0% | |
| CATTCTCAATTACGTGTTTG+TGG | + | chr5.3:23046092-23046111 | None:intergenic | 35.0% | |
| CGCATATTGCAGAACAATAA+CGG | + | chr5.3:23047824-23047843 | None:intergenic | 35.0% | |
| CTGTGATTTCTTCATTTGGT+TGG | - | chr5.3:23048475-23048494 | MS.gene53464:intron | 35.0% | |
| CTTCATTCAAATAGTTGACC+AGG | + | chr5.3:23048057-23048076 | None:intergenic | 35.0% | |
| CTTTAACCACAAGGAATTTG+AGG | - | chr5.3:23046582-23046601 | MS.gene53464:intron | 35.0% | |
| GAAAAACAAAGTCGATGAAC+AGG | + | chr5.3:23046475-23046494 | None:intergenic | 35.0% | |
| GAACAGATGGACATTTACTT+TGG | - | chr5.3:23046285-23046304 | MS.gene53464:intron | 35.0% | |
| GACAAATCAAGGAAAGGATA+AGG | + | chr5.3:23049571-23049590 | None:intergenic | 35.0% | |
| GCATATTGCAGAACAATAAC+GGG | + | chr5.3:23047823-23047842 | None:intergenic | 35.0% | |
| GCATGGAATACATGTGTTAA+AGG | - | chr5.3:23045723-23045742 | MS.gene53464:intron | 35.0% | |
| GCTATAGTACTTTAGTGTAG+CGG | + | chr5.3:23046034-23046053 | None:intergenic | 35.0% | |
| GCTATTATTTCATGGCATTG+TGG | + | chr5.3:23046058-23046077 | None:intergenic | 35.0% | |
| GGATCTAGTTGTTACAATAC+TGG | - | chr5.3:23047475-23047494 | MS.gene53464:intron | 35.0% | |
| GGATGTGAAGTAGTTATGTT+TGG | - | chr5.3:23048740-23048759 | MS.gene53464:intron | 35.0% | |
| GTAACAGAGAGACTGAATAA+TGG | + | chr5.3:23048180-23048199 | None:intergenic | 35.0% | |
| GTGTCAGAATTTATCATCGA+TGG | - | chr5.3:23047454-23047473 | MS.gene53464:intron | 35.0% | |
| TAAATCAAGAAATGAGAGGG+TGG | - | chr5.3:23045656-23045675 | MS.gene53464:CDS | 35.0% | |
| TACGAACTCTTAGATAAGAC+AGG | + | chr5.3:23046673-23046692 | None:intergenic | 35.0% | |
| TCAGGAGCCAAAAAAAGAAA+GGG | + | chr5.3:23046267-23046286 | None:intergenic | 35.0% | |
| TCATAACCAATTGTTGCCTT+AGG | + | chr5.3:23049984-23050003 | None:intergenic | 35.0% | |
| TGATATAGGGTGGAATGAAA+TGG | - | chr5.3:23049877-23049896 | MS.gene53464:intron | 35.0% | |
| TGCTATATGAAGATGAAGCA+TGG | - | chr5.3:23045706-23045725 | MS.gene53464:CDS | 35.0% | |
| TGTTGACAAAGACTCAAAGT+TGG | + | chr5.3:23046838-23046857 | None:intergenic | 35.0% | |
| TTACAACACTTGGCTGAAAA+AGG | - | chr5.3:23047945-23047964 | MS.gene53464:intron | 35.0% | |
| TTCAGGAGCCAAAAAAAGAA+AGG | + | chr5.3:23046268-23046287 | None:intergenic | 35.0% | |
| ! | AATATAGTTGTTGATGGAGG+TGG | - | chr5.3:23045816-23045835 | MS.gene53464:intron | 35.0% |
| ! | CATATGGTGATGACAAATCA+AGG | + | chr5.3:23049582-23049601 | None:intergenic | 35.0% |
| ! | CCTTATTTAGCACACTTGTT+GGG | - | chr5.3:23047234-23047253 | MS.gene53464:intron | 35.0% |
| ! | GCTAATATAGTTGTTGATGG+AGG | - | chr5.3:23045813-23045832 | MS.gene53464:intron | 35.0% |
| ! | GTTTTACCAAAGCGAAACAA+CGG | + | chr5.3:23049469-23049488 | None:intergenic | 35.0% |
| ! | TAGAAGTTGCTTTAACCACA+AGG | - | chr5.3:23046573-23046592 | MS.gene53464:intron | 35.0% |
| ! | TCCTTATTTAGCACACTTGT+TGG | - | chr5.3:23047233-23047252 | MS.gene53464:intron | 35.0% |
| ! | TGGTATATGGTGGAATGAAA+TGG | + | chr5.3:23049945-23049964 | None:intergenic | 35.0% |
| ! | TGTATGTTTGCTTCCACTTT+TGG | + | chr5.3:23048926-23048945 | None:intergenic | 35.0% |
| ! | TGTCGTGTGCTATTATTTCA+TGG | + | chr5.3:23046066-23046085 | None:intergenic | 35.0% |
| ! | TGTTTATTGGCTGGAAAACA+CGG | + | chr5.3:23046142-23046161 | None:intergenic | 35.0% |
| ! | TTCTAACCTTTTGTTACAGG+TGG | - | chr5.3:23049545-23049564 | MS.gene53464:intron | 35.0% |
| !! | ACATAGTTTTTAGGGACTGT+TGG | - | chr5.3:23048635-23048654 | MS.gene53464:intron | 35.0% |
| !! | GTATGTTTGCTTCCACTTTT+GGG | + | chr5.3:23048925-23048944 | None:intergenic | 35.0% |
| !! | TATGTTTGCTTCCACTTTTG+GGG | + | chr5.3:23048924-23048943 | None:intergenic | 35.0% |
| !! | TTGTTGGACTTTTAGGTACT+TGG | - | chr5.3:23050067-23050086 | MS.gene53464:CDS | 35.0% |
| !!! | GCTGATTCCCTTTCTTTTTT+TGG | - | chr5.3:23046257-23046276 | MS.gene53464:intron | 35.0% |
| !!! | TAGGGTGTGTTCGAATTTTT+TGG | + | chr5.3:23049965-23049984 | None:intergenic | 35.0% |
| AAATGAAGAAATCACAGGCC+AGG | + | chr5.3:23048472-23048491 | None:intergenic | 40.0% | |
| AACGCATTAGATACAGAACG+AGG | - | chr5.3:23046607-23046626 | MS.gene53464:intron | 40.0% | |
| AATATCCAGACGGAAGTCTT+TGG | + | chr5.3:23048428-23048447 | None:intergenic | 40.0% | |
| AATGAAGAAATCACAGGCCA+GGG | + | chr5.3:23048471-23048490 | None:intergenic | 40.0% | |
| AGAACCGTCAATATACGAAG+AGG | + | chr5.3:23047175-23047194 | None:intergenic | 40.0% | |
| AGGTTCATCAGTTTCCTCTA+TGG | + | chr5.3:23046455-23046474 | None:intergenic | 40.0% | |
| AGTACAACTGATCTTATCCC+TGG | - | chr5.3:23048451-23048470 | MS.gene53464:intron | 40.0% | |
| AGTTCAATGATGTTTCGCCA+AGG | + | chr5.3:23049280-23049299 | None:intergenic | 40.0% | |
| AGTTGTGATCTAGGGATACA+AGG | + | chr5.3:23047069-23047088 | None:intergenic | 40.0% | |
| ATAAGGCCACCTGTAACAAA+AGG | + | chr5.3:23049554-23049573 | None:intergenic | 40.0% | |
| ATGCCCTCTTCGTATATTGA+CGG | - | chr5.3:23047168-23047187 | MS.gene53464:intron | 40.0% | |
| CCCAACAAGTGTGCTAAATA+AGG | + | chr5.3:23047237-23047256 | None:intergenic | 40.0% | |
| CGAAACATCATTGAACTGCA+TGG | - | chr5.3:23049283-23049302 | MS.gene53464:intron | 40.0% | |
| CTGTAAGCAAGCAACCAATT+AGG | + | chr5.3:23045756-23045775 | None:intergenic | 40.0% | |
| GAACCGTCAATATACGAAGA+GGG | + | chr5.3:23047174-23047193 | None:intergenic | 40.0% | |
| GAAGATGCAGAAAGGTGAAT+AGG | - | chr5.3:23049109-23049128 | MS.gene53464:CDS | 40.0% | |
| GGTGATGACAAATCAAGGAA+AGG | + | chr5.3:23049577-23049596 | None:intergenic | 40.0% | |
| GTTAACAGAGTGCATACCAA+CGG | + | chr5.3:23049246-23049265 | None:intergenic | 40.0% | |
| TAAGAGTTCGTATGCCAATC+AGG | - | chr5.3:23046681-23046700 | MS.gene53464:intron | 40.0% | |
| TCAGAAATCCCATCAAGAGT+TGG | + | chr5.3:23046646-23046665 | None:intergenic | 40.0% | |
| TCGATTGAGAGATTCCTGAT+TGG | + | chr5.3:23046698-23046717 | None:intergenic | 40.0% | |
| TCTCTCAATCGAAATACAGC+TGG | - | chr5.3:23046706-23046725 | MS.gene53464:intron | 40.0% | |
| TGGCCTGTGATTTCTTCATT+TGG | - | chr5.3:23048471-23048490 | MS.gene53464:intron | 40.0% | |
| TTAGGACATTGGTAGACATC+TGG | - | chr5.3:23047521-23047540 | MS.gene53464:intron | 40.0% | |
| TTCAATTTGCAGTTCACCGT+TGG | - | chr5.3:23049227-23049246 | MS.gene53464:CDS | 40.0% | |
| TTTATTACCTCCCCCAAAAG+TGG | - | chr5.3:23048910-23048929 | MS.gene53464:intron | 40.0% | |
| TTTGGATCAGTGATATAGGG+TGG | - | chr5.3:23049867-23049886 | MS.gene53464:intron | 40.0% | |
| ! | AATGACCAGTAGTTTGCAGA+AGG | - | chr5.3:23048154-23048173 | MS.gene53464:intron | 40.0% |
| ! | CTGGTTCTTGTCAGTTTCTA+CGG | - | chr5.3:23050174-23050193 | MS.gene53464:CDS | 40.0% |
| ! | CTTGATGTTGCTGTTGCATT+AGG | - | chr5.3:23047503-23047522 | MS.gene53464:intron | 40.0% |
| ! | GATAGTTAGTCTCTTCTCTG+AGG | + | chr5.3:23047092-23047111 | None:intergenic | 40.0% |
| ! | GTCGGTTTCATTTGCTAATC+TGG | + | chr5.3:23047213-23047232 | None:intergenic | 40.0% |
| ! | TAGTGAAGTTGAAGCACTTG+TGG | - | chr5.3:23050135-23050154 | MS.gene53464:CDS | 40.0% |
| ! | TGGCATCTTGTTGGACTTTT+AGG | - | chr5.3:23050060-23050079 | MS.gene53464:CDS | 40.0% |
| ! | TTGCTGTTGCATTAGGACAT+TGG | - | chr5.3:23047510-23047529 | MS.gene53464:intron | 40.0% |
| !! | ACTTTTAGGTACTTGGCTGT+TGG | - | chr5.3:23050074-23050093 | MS.gene53464:CDS | 40.0% |
| !! | ATGTTTGCTTCCACTTTTGG+GGG | + | chr5.3:23048923-23048942 | None:intergenic | 40.0% |
| !! | ATTGCTGATTCGGGTATGTT+TGG | - | chr5.3:23049849-23049868 | MS.gene53464:intron | 40.0% |
| !! | CAAGTTTGTTGGCATCTTGT+TGG | - | chr5.3:23050051-23050070 | MS.gene53464:CDS | 40.0% |
| !! | CTAATCTGGCAAGTTTGTTG+AGG | + | chr5.3:23047199-23047218 | None:intergenic | 40.0% |
| !! | TAAAGCTTTTGGGGACTGTT+CGG | - | chr5.3:23048525-23048544 | MS.gene53464:intron | 40.0% |
| !! | TTTCATCTTTTTGGGGGGTA+GGG | - | chr5.3:23046375-23046394 | MS.gene53464:CDS | 40.0% |
| !! | TTTTCATCTTTTTGGGGGGT+AGG | - | chr5.3:23046374-23046393 | MS.gene53464:CDS | 40.0% |
| !!! | TTTTTTGGCTCCTGAACAGA+TGG | - | chr5.3:23046272-23046291 | MS.gene53464:intron | 40.0% |
| AATGGCCTTCTGCAAACTAC+TGG | + | chr5.3:23048162-23048181 | None:intergenic | 45.0% | |
| ACACACCCTAAGGCAACAAT+TGG | - | chr5.3:23049975-23049994 | MS.gene53464:CDS | 45.0% | |
| AGAAATGAGAGGGTGGAAGA+AGG | - | chr5.3:23045663-23045682 | MS.gene53464:CDS | 45.0% | |
| ATCGAAATACAGCTGGTGTG+TGG | - | chr5.3:23046713-23046732 | MS.gene53464:intron | 45.0% | |
| ATGTGGCTCCAACTCTTGAT+GGG | - | chr5.3:23046635-23046654 | MS.gene53464:intron | 45.0% | |
| CCAGGACTTTCTGATCTAGA+AGG | + | chr5.3:23048039-23048058 | None:intergenic | 45.0% | |
| CCTTCTAGATCAGAAAGTCC+TGG | - | chr5.3:23048036-23048055 | MS.gene53464:intron | 45.0% | |
| CGTTTCCCTCAAATTCCTTG+TGG | + | chr5.3:23046591-23046610 | None:intergenic | 45.0% | |
| GAAATGAGAGGGTGGAAGAA+GGG | - | chr5.3:23045664-23045683 | MS.gene53464:CDS | 45.0% | |
| GAGTGGAAGTCACTTAGAGA+AGG | + | chr5.3:23046514-23046533 | None:intergenic | 45.0% | |
| GTCAATATACGAAGAGGGCA+TGG | + | chr5.3:23047169-23047188 | None:intergenic | 45.0% | |
| TAGTCAATGTCTAGCACAGG+CGG | + | chr5.3:23049025-23049044 | None:intergenic | 45.0% | |
| TATGTGGCTCCAACTCTTGA+TGG | - | chr5.3:23046634-23046653 | MS.gene53464:intron | 45.0% | |
| TCAATGATGTTTCGCCAAGG+AGG | + | chr5.3:23049277-23049296 | None:intergenic | 45.0% | |
| TCGAAATACAGCTGGTGTGT+GGG | - | chr5.3:23046714-23046733 | MS.gene53464:intron | 45.0% | |
| TGCTCACTGACCTTGTATTC+TGG | - | chr5.3:23048377-23048396 | MS.gene53464:intron | 45.0% | |
| TGGTTGTCGAGATTGTTCTC+TGG | - | chr5.3:23050155-23050174 | MS.gene53464:CDS | 45.0% | |
| ! | CTCTGAGGAGTTGTGATCTA+GGG | + | chr5.3:23047077-23047096 | None:intergenic | 45.0% |
| ! | TACAGAACGAGGCACTTATG+TGG | - | chr5.3:23046618-23046637 | MS.gene53464:intron | 45.0% |
| ! | TCTCTGAGGAGTTGTGATCT+AGG | + | chr5.3:23047078-23047097 | None:intergenic | 45.0% |
| ! | TTAGCACACTTGTTGGGCTT+AGG | - | chr5.3:23047240-23047259 | MS.gene53464:intron | 45.0% |
| ACCAAAGCGAAACAACGGCA+TGG | + | chr5.3:23049464-23049483 | None:intergenic | 50.0% | |
| AGTCAATGTCTAGCACAGGC+GGG | + | chr5.3:23049024-23049043 | None:intergenic | 50.0% | |
| CGAAATACAGCTGGTGTGTG+GGG | - | chr5.3:23046715-23046734 | MS.gene53464:intron | 50.0% | |
| CGGTAGTCAATGTCTAGCAC+AGG | + | chr5.3:23049028-23049047 | None:intergenic | 50.0% | |
| GACATCCAAAGACTTCCGTC+TGG | - | chr5.3:23048420-23048439 | MS.gene53464:intron | 50.0% | |
| ! | ATACGAAGAGGGCATGGTGA+AGG | + | chr5.3:23047163-23047182 | None:intergenic | 50.0% |
| ! | TACGAAGAGGGCATGGTGAA+GGG | + | chr5.3:23047162-23047181 | None:intergenic | 50.0% |
| ! | TCCATGCCGTTGTTTCGCTT+TGG | - | chr5.3:23049460-23049479 | MS.gene53464:intron | 50.0% |
| !! | TTTGCTTCCACTTTTGGGGG+AGG | + | chr5.3:23048920-23048939 | None:intergenic | 50.0% |
| GGAAGAAGGGCGACGAGAAA+CGG | - | chr5.3:23045677-23045696 | MS.gene53464:CDS | 55.0% | |
| GTTAACGCTGTGCTCCTCCT+TGG | - | chr5.3:23049260-23049279 | MS.gene53464:intron | 55.0% | |
| GTTGGGCTTAGGCACAAACC+AGG | - | chr5.3:23047251-23047270 | MS.gene53464:intron | 55.0% | |
| TTGGGGGGTAGGGTGGAATT+TGG | - | chr5.3:23046385-23046404 | MS.gene53464:CDS | 55.0% | |
| !! | CATCTTTTTGGGGGGTAGGG+TGG | - | chr5.3:23046378-23046397 | MS.gene53464:CDS | 55.0% |
| GAAGGGCGACGAGAAACGGT+TGG | - | chr5.3:23045681-23045700 | MS.gene53464:CDS | 60.0% | |
| ! | GAAGAGGGCATGGTGAAGGG+AGG | + | chr5.3:23047159-23047178 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 23045612 | 23050199 | 23045612 | ID=MS.gene53464 |
| chr5.3 | mRNA | 23045612 | 23050199 | 23045612 | ID=MS.gene53464.t1;Parent=MS.gene53464 |
| chr5.3 | exon | 23049952 | 23050199 | 23049952 | ID=MS.gene53464.t1.exon1;Parent=MS.gene53464.t1 |
| chr5.3 | CDS | 23049952 | 23050199 | 23049952 | ID=cds.MS.gene53464.t1;Parent=MS.gene53464.t1 |
| chr5.3 | exon | 23049487 | 23049520 | 23049487 | ID=MS.gene53464.t1.exon2;Parent=MS.gene53464.t1 |
| chr5.3 | CDS | 23049487 | 23049520 | 23049487 | ID=cds.MS.gene53464.t1;Parent=MS.gene53464.t1 |
| chr5.3 | exon | 23049049 | 23049261 | 23049049 | ID=MS.gene53464.t1.exon3;Parent=MS.gene53464.t1 |
| chr5.3 | CDS | 23049049 | 23049261 | 23049049 | ID=cds.MS.gene53464.t1;Parent=MS.gene53464.t1 |
| chr5.3 | exon | 23047364 | 23047453 | 23047364 | ID=MS.gene53464.t1.exon4;Parent=MS.gene53464.t1 |
| chr5.3 | CDS | 23047364 | 23047453 | 23047364 | ID=cds.MS.gene53464.t1;Parent=MS.gene53464.t1 |
| chr5.3 | exon | 23046507 | 23046572 | 23046507 | ID=MS.gene53464.t1.exon5;Parent=MS.gene53464.t1 |
| chr5.3 | CDS | 23046507 | 23046572 | 23046507 | ID=cds.MS.gene53464.t1;Parent=MS.gene53464.t1 |
| chr5.3 | exon | 23046330 | 23046421 | 23046330 | ID=MS.gene53464.t1.exon6;Parent=MS.gene53464.t1 |
| chr5.3 | CDS | 23046330 | 23046421 | 23046330 | ID=cds.MS.gene53464.t1;Parent=MS.gene53464.t1 |
| chr5.3 | exon | 23046200 | 23046247 | 23046200 | ID=MS.gene53464.t1.exon7;Parent=MS.gene53464.t1 |
| chr5.3 | CDS | 23046200 | 23046247 | 23046200 | ID=cds.MS.gene53464.t1;Parent=MS.gene53464.t1 |
| chr5.3 | exon | 23045612 | 23045729 | 23045612 | ID=MS.gene53464.t1.exon8;Parent=MS.gene53464.t1 |
| chr5.3 | CDS | 23045612 | 23045729 | 23045612 | ID=cds.MS.gene53464.t1;Parent=MS.gene53464.t1 |
| Gene Sequence |
| Protein sequence |
