Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58166.t1 | XP_003630119.1 | 98.1 | 209 | 4 | 0 | 1 | 209 | 1 | 209 | 3.10E-117 | 431 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58166.t1 | Q43463 | 79.0 | 205 | 42 | 1 | 6 | 209 | 2 | 206 | 2.7e-93 | 342.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58166.t1 | G7LBB5 | 98.1 | 209 | 4 | 0 | 1 | 209 | 1 | 209 | 2.2e-117 | 431.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene58166 | 0.802154 | 6.42E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene58166 | 0.805346 | 1.40E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene58166 | 0.824137 | 9.50E-54 | -1.69E-46 |
| MS.gene049910 | MS.gene58166 | 0.805666 | 1.20E-49 | -1.69E-46 |
| MS.gene049915 | MS.gene58166 | 0.813156 | 2.95E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene58166 | 0.826294 | 2.94E-54 | -1.69E-46 |
| MS.gene050227 | MS.gene58166 | 0.820999 | 5.10E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene58166 | 0.818945 | 1.50E-52 | -1.69E-46 |
| MS.gene050398 | MS.gene58166 | 0.809803 | 1.58E-50 | -1.69E-46 |
| MS.gene050516 | MS.gene58166 | 0.80672 | 7.17E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene58166 | -0.837412 | 5.28E-57 | -1.69E-46 |
| MS.gene050642 | MS.gene58166 | 0.840644 | 7.68E-58 | -1.69E-46 |
| MS.gene050762 | MS.gene58166 | 0.818112 | 2.32E-52 | -1.69E-46 |
| MS.gene050763 | MS.gene58166 | 0.821033 | 5.00E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene58166 | 0.812353 | 4.43E-51 | -1.69E-46 |
| MS.gene051983 | MS.gene58166 | 0.826074 | 3.31E-54 | -1.69E-46 |
| MS.gene052077 | MS.gene58166 | 0.813498 | 2.48E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene58166 | 0.821167 | 4.66E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene58166 | 0.809177 | 2.15E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene58166 | 0.835811 | 1.35E-56 | -1.69E-46 |
| MS.gene054184 | MS.gene58166 | 0.833622 | 4.80E-56 | -1.69E-46 |
| MS.gene054185 | MS.gene58166 | 0.830602 | 2.68E-55 | -1.69E-46 |
| MS.gene054379 | MS.gene58166 | 0.826085 | 3.29E-54 | -1.69E-46 |
| MS.gene054930 | MS.gene58166 | 0.831088 | 2.04E-55 | -1.69E-46 |
| MS.gene055133 | MS.gene58166 | 0.812908 | 3.35E-51 | -1.69E-46 |
| MS.gene056875 | MS.gene58166 | 0.801232 | 9.92E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene58166 | 0.831177 | 1.94E-55 | -1.69E-46 |
| MS.gene057750 | MS.gene58166 | 0.803864 | 2.84E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene58166 | 0.835403 | 1.71E-56 | -1.69E-46 |
| MS.gene058002 | MS.gene58166 | 0.814846 | 1.25E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene58166 | 0.827435 | 1.57E-54 | -1.69E-46 |
| MS.gene058142 | MS.gene58166 | 0.80098 | 1.12E-48 | -1.69E-46 |
| MS.gene058710 | MS.gene58166 | 0.804021 | 2.64E-49 | -1.69E-46 |
| MS.gene058749 | MS.gene58166 | 0.816885 | 4.39E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene58166 | 0.805261 | 1.45E-49 | -1.69E-46 |
| MS.gene059124 | MS.gene58166 | 0.80255 | 5.32E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene58166 | 0.835124 | 2.01E-56 | -1.69E-46 |
| MS.gene060084 | MS.gene58166 | 0.813823 | 2.11E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene58166 | 0.818265 | 2.15E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58166.t1 | MTR_8g092020 | 98.086 | 209 | 4 | 0 | 1 | 209 | 1 | 209 | 6.16e-157 | 432 |
| MS.gene58166.t1 | MTR_1g097420 | 74.757 | 206 | 50 | 1 | 6 | 209 | 2 | 207 | 2.02e-115 | 327 |
| MS.gene58166.t1 | MTR_1g097420 | 66.094 | 233 | 50 | 2 | 6 | 209 | 2 | 234 | 3.51e-109 | 313 |
| MS.gene58166.t1 | MTR_2g101890 | 65.700 | 207 | 71 | 0 | 3 | 209 | 1 | 207 | 2.26e-102 | 294 |
| MS.gene58166.t1 | MTR_4g012940 | 65.686 | 204 | 70 | 0 | 6 | 209 | 2 | 205 | 1.26e-101 | 292 |
| MS.gene58166.t1 | MTR_4g069850 | 67.488 | 203 | 65 | 1 | 8 | 209 | 4 | 206 | 1.29e-100 | 290 |
| MS.gene58166.t1 | MTR_6g039490 | 69.652 | 201 | 61 | 0 | 9 | 209 | 5 | 205 | 7.57e-100 | 288 |
| MS.gene58166.t1 | MTR_1452s0010 | 75.789 | 95 | 23 | 0 | 32 | 126 | 1 | 95 | 4.04e-49 | 155 |
| MS.gene58166.t1 | MTR_4g079350 | 42.593 | 162 | 86 | 3 | 12 | 173 | 13 | 167 | 1.94e-38 | 132 |
| MS.gene58166.t1 | MTR_5g013900 | 37.019 | 208 | 108 | 6 | 14 | 209 | 11 | 207 | 2.45e-38 | 132 |
| MS.gene58166.t1 | MTR_1g052475 | 42.424 | 165 | 88 | 3 | 12 | 176 | 15 | 172 | 2.95e-38 | 132 |
| MS.gene58166.t1 | MTR_3g064390 | 36.598 | 194 | 116 | 4 | 14 | 207 | 12 | 198 | 6.01e-38 | 130 |
| MS.gene58166.t1 | MTR_2g014990 | 41.975 | 162 | 87 | 3 | 12 | 173 | 13 | 167 | 1.15e-37 | 130 |
| MS.gene58166.t1 | MTR_4g088090 | 41.975 | 162 | 87 | 3 | 12 | 173 | 13 | 167 | 1.53e-37 | 130 |
| MS.gene58166.t1 | MTR_7g405790 | 41.317 | 167 | 91 | 3 | 12 | 178 | 15 | 174 | 1.54e-37 | 130 |
| MS.gene58166.t1 | MTR_8g036220 | 41.718 | 163 | 88 | 3 | 12 | 174 | 16 | 171 | 1.70e-37 | 130 |
| MS.gene58166.t1 | MTR_2g096550 | 40.120 | 167 | 95 | 3 | 12 | 178 | 15 | 176 | 4.91e-37 | 128 |
| MS.gene58166.t1 | MTR_5g076590 | 36.082 | 194 | 117 | 4 | 14 | 207 | 12 | 198 | 1.33e-36 | 127 |
| MS.gene58166.t1 | MTR_0262s0050 | 41.212 | 165 | 90 | 3 | 12 | 176 | 15 | 172 | 2.27e-36 | 127 |
| MS.gene58166.t1 | MTR_8g089985 | 37.791 | 172 | 100 | 3 | 5 | 176 | 10 | 174 | 2.50e-36 | 127 |
| MS.gene58166.t1 | MTR_1686s0010 | 63.855 | 83 | 30 | 0 | 32 | 114 | 1 | 83 | 3.90e-36 | 122 |
| MS.gene58166.t1 | MTR_3g087160 | 33.498 | 203 | 121 | 4 | 14 | 209 | 11 | 206 | 4.95e-36 | 125 |
| MS.gene58166.t1 | MTR_1g068730 | 39.881 | 168 | 93 | 3 | 12 | 178 | 15 | 175 | 5.15e-36 | 126 |
| MS.gene58166.t1 | MTR_2g090865 | 40.606 | 165 | 91 | 3 | 12 | 176 | 11 | 168 | 5.41e-36 | 126 |
| MS.gene58166.t1 | MTR_1g115325 | 35.437 | 206 | 116 | 4 | 12 | 207 | 15 | 213 | 5.41e-36 | 126 |
| MS.gene58166.t1 | MTR_8g090215 | 33.824 | 204 | 120 | 4 | 14 | 209 | 11 | 207 | 6.23e-36 | 125 |
| MS.gene58166.t1 | MTR_6g021790 | 38.857 | 175 | 100 | 3 | 12 | 186 | 6 | 173 | 6.43e-36 | 125 |
| MS.gene58166.t1 | MTR_2g005510 | 40.123 | 162 | 90 | 3 | 12 | 173 | 15 | 169 | 7.40e-36 | 125 |
| MS.gene58166.t1 | MTR_4g064897 | 36.471 | 170 | 101 | 2 | 7 | 176 | 7 | 169 | 7.63e-36 | 125 |
| MS.gene58166.t1 | MTR_2g075950 | 34.848 | 198 | 112 | 4 | 12 | 209 | 13 | 193 | 1.58e-35 | 125 |
| MS.gene58166.t1 | MTR_1g068740 | 39.286 | 168 | 94 | 3 | 12 | 178 | 15 | 175 | 1.77e-35 | 124 |
| MS.gene58166.t1 | MTR_7g100020 | 38.202 | 178 | 102 | 3 | 12 | 188 | 15 | 185 | 2.37e-35 | 124 |
| MS.gene58166.t1 | MTR_3g086980 | 38.182 | 165 | 95 | 3 | 12 | 176 | 16 | 173 | 2.49e-35 | 124 |
| MS.gene58166.t1 | MTR_4g098950 | 35.096 | 208 | 111 | 7 | 14 | 209 | 11 | 206 | 6.41e-35 | 123 |
| MS.gene58166.t1 | MTR_8g103550 | 37.356 | 174 | 102 | 4 | 5 | 178 | 2 | 168 | 1.32e-34 | 122 |
| MS.gene58166.t1 | MTR_3g069510 | 36.364 | 165 | 98 | 2 | 12 | 176 | 12 | 169 | 2.52e-34 | 121 |
| MS.gene58166.t1 | MTR_7g051940 | 37.725 | 167 | 97 | 3 | 12 | 178 | 13 | 172 | 4.83e-34 | 120 |
| MS.gene58166.t1 | MTR_8g006970 | 38.554 | 166 | 95 | 3 | 12 | 177 | 8 | 166 | 5.24e-34 | 120 |
| MS.gene58166.t1 | MTR_2g027660 | 37.952 | 166 | 96 | 2 | 12 | 177 | 6 | 164 | 6.76e-34 | 120 |
| MS.gene58166.t1 | MTR_8g006970 | 38.554 | 166 | 95 | 3 | 12 | 177 | 22 | 180 | 1.02e-33 | 120 |
| MS.gene58166.t1 | MTR_2g083860 | 38.889 | 162 | 92 | 2 | 12 | 173 | 13 | 167 | 1.63e-33 | 119 |
| MS.gene58166.t1 | MTR_7g081700 | 37.952 | 166 | 96 | 3 | 12 | 177 | 8 | 166 | 4.73e-33 | 118 |
| MS.gene58166.t1 | MTR_1g078200 | 37.725 | 167 | 97 | 2 | 12 | 178 | 14 | 173 | 9.65e-33 | 117 |
| MS.gene58166.t1 | MTR_8g031680 | 37.427 | 171 | 100 | 2 | 13 | 183 | 7 | 170 | 1.34e-32 | 117 |
| MS.gene58166.t1 | MTR_8g027220 | 34.579 | 214 | 117 | 6 | 12 | 209 | 26 | 232 | 8.05e-32 | 115 |
| MS.gene58166.t1 | MTR_2g005500 | 36.416 | 173 | 103 | 3 | 5 | 177 | 2 | 167 | 9.80e-32 | 114 |
| MS.gene58166.t1 | MTR_4g063160 | 36.232 | 207 | 114 | 6 | 12 | 207 | 15 | 214 | 9.89e-32 | 115 |
| MS.gene58166.t1 | MTR_1663s0010 | 66.667 | 75 | 25 | 0 | 114 | 188 | 1 | 75 | 1.03e-31 | 110 |
| MS.gene58166.t1 | MTR_6g079550 | 39.264 | 163 | 92 | 4 | 12 | 174 | 12 | 167 | 1.20e-31 | 114 |
| MS.gene58166.t1 | MTR_8g031870 | 35.542 | 166 | 100 | 2 | 13 | 178 | 7 | 165 | 5.88e-31 | 112 |
| MS.gene58166.t1 | MTR_2g102060 | 35.758 | 165 | 99 | 2 | 14 | 178 | 12 | 169 | 1.16e-29 | 109 |
| MS.gene58166.t1 | MTR_8g107070 | 35.979 | 189 | 109 | 5 | 12 | 198 | 14 | 192 | 1.37e-29 | 110 |
| MS.gene58166.t1 | MTR_7g117910 | 38.514 | 148 | 83 | 3 | 12 | 159 | 20 | 159 | 2.85e-29 | 108 |
| MS.gene58166.t1 | MTR_3g064390 | 41.860 | 129 | 69 | 3 | 14 | 142 | 12 | 134 | 1.60e-28 | 105 |
| MS.gene58166.t1 | MTR_1g094220 | 34.503 | 171 | 104 | 5 | 9 | 178 | 28 | 191 | 1.10e-27 | 104 |
| MS.gene58166.t1 | MTR_8g031660 | 32.584 | 178 | 113 | 2 | 12 | 189 | 6 | 176 | 1.34e-27 | 104 |
| MS.gene58166.t1 | MTR_1g068730 | 41.985 | 131 | 68 | 3 | 12 | 141 | 15 | 138 | 1.97e-27 | 102 |
| MS.gene58166.t1 | MTR_1g068740 | 41.985 | 131 | 68 | 3 | 12 | 141 | 15 | 138 | 2.54e-27 | 103 |
| MS.gene58166.t1 | MTR_8g031830 | 32.275 | 189 | 115 | 6 | 13 | 201 | 7 | 182 | 8.23e-27 | 102 |
| MS.gene58166.t1 | MTR_7g103070 | 38.509 | 161 | 92 | 5 | 14 | 173 | 18 | 172 | 1.00e-26 | 102 |
| MS.gene58166.t1 | MTR_1g029450 | 39.634 | 164 | 89 | 6 | 12 | 173 | 17 | 172 | 1.12e-26 | 102 |
| MS.gene58166.t1 | MTR_1g094220 | 34.337 | 166 | 101 | 5 | 9 | 173 | 28 | 186 | 1.29e-26 | 101 |
| MS.gene58166.t1 | MTR_8g093740 | 38.068 | 176 | 98 | 7 | 1 | 173 | 1 | 168 | 1.65e-26 | 101 |
| MS.gene58166.t1 | MTR_1g094220 | 34.337 | 166 | 101 | 5 | 9 | 173 | 28 | 186 | 2.56e-26 | 100 |
| MS.gene58166.t1 | MTR_3g107717 | 31.325 | 166 | 104 | 3 | 13 | 178 | 14 | 169 | 2.94e-26 | 100 |
| MS.gene58166.t1 | MTR_3g107707 | 31.325 | 166 | 104 | 3 | 13 | 178 | 14 | 169 | 2.97e-26 | 100 |
| MS.gene58166.t1 | MTR_4g099470 | 37.956 | 137 | 78 | 2 | 41 | 177 | 13 | 142 | 3.01e-26 | 99.8 |
| MS.gene58166.t1 | MTR_3g107713 | 31.325 | 166 | 104 | 3 | 13 | 178 | 14 | 169 | 3.37e-26 | 100 |
| MS.gene58166.t1 | MTR_1g094220 | 34.337 | 166 | 101 | 5 | 9 | 173 | 28 | 186 | 4.27e-26 | 100 |
| MS.gene58166.t1 | MTR_3g096350 | 37.143 | 175 | 100 | 6 | 1 | 173 | 1 | 167 | 8.57e-26 | 99.4 |
| MS.gene58166.t1 | MTR_1g062760 | 34.653 | 202 | 120 | 6 | 13 | 209 | 15 | 209 | 7.36e-25 | 97.1 |
| MS.gene58166.t1 | MTR_1812s0010 | 64.062 | 64 | 23 | 0 | 123 | 186 | 10 | 73 | 1.41e-24 | 92.4 |
| MS.gene58166.t1 | MTR_1g090717 | 35.821 | 201 | 117 | 6 | 13 | 207 | 16 | 210 | 9.44e-24 | 94.4 |
| MS.gene58166.t1 | MTR_3g096350 | 39.552 | 134 | 74 | 4 | 1 | 132 | 1 | 129 | 6.33e-23 | 90.5 |
| MS.gene58166.t1 | MTR_3g096350 | 39.552 | 134 | 74 | 4 | 1 | 132 | 1 | 129 | 6.59e-23 | 90.5 |
| MS.gene58166.t1 | MTR_4g113620 | 28.655 | 171 | 103 | 4 | 13 | 183 | 14 | 165 | 6.43e-20 | 84.3 |
| MS.gene58166.t1 | MTR_8g093740 | 38.346 | 133 | 73 | 5 | 43 | 173 | 10 | 135 | 1.28e-18 | 79.7 |
| MS.gene58166.t1 | MTR_4g088055 | 29.775 | 178 | 110 | 4 | 12 | 180 | 6 | 177 | 2.59e-18 | 79.7 |
| MS.gene58166.t1 | MTR_5g036990 | 55.714 | 70 | 30 | 1 | 43 | 111 | 32 | 101 | 3.29e-18 | 77.4 |
| MS.gene58166.t1 | MTR_6g087980 | 28.986 | 207 | 123 | 6 | 12 | 208 | 6 | 198 | 5.98e-18 | 79.0 |
| MS.gene58166.t1 | MTR_2g090875 | 29.944 | 177 | 109 | 4 | 12 | 179 | 6 | 176 | 6.84e-18 | 78.6 |
| MS.gene58166.t1 | MTR_5g022600 | 28.824 | 170 | 108 | 3 | 12 | 173 | 6 | 170 | 5.54e-16 | 73.6 |
| MS.gene58166.t1 | MTR_4g073250 | 28.249 | 177 | 112 | 4 | 12 | 179 | 6 | 176 | 6.15e-16 | 73.2 |
| MS.gene58166.t1 | MTR_7g103070 | 38.843 | 121 | 67 | 5 | 54 | 173 | 2 | 116 | 8.03e-16 | 72.0 |
| MS.gene58166.t1 | MTR_3g078260 | 29.825 | 171 | 105 | 4 | 12 | 173 | 8 | 172 | 1.85e-15 | 72.4 |
| MS.gene58166.t1 | MTR_8g075240 | 29.412 | 170 | 107 | 4 | 12 | 173 | 6 | 170 | 3.08e-15 | 71.2 |
| MS.gene58166.t1 | MTR_2g093510 | 65.306 | 49 | 17 | 0 | 141 | 189 | 779 | 827 | 3.74e-15 | 73.9 |
| MS.gene58166.t1 | MTR_3g078260 | 31.405 | 121 | 76 | 3 | 12 | 131 | 8 | 122 | 1.94e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58166.t1 | AT1G22740 | 75.490 | 204 | 48 | 1 | 6 | 209 | 2 | 203 | 5.31e-113 | 321 |
| MS.gene58166.t1 | AT4G09720 | 71.429 | 203 | 57 | 1 | 8 | 209 | 4 | 206 | 4.09e-110 | 314 |
| MS.gene58166.t1 | AT4G09720 | 70.192 | 208 | 56 | 3 | 8 | 209 | 4 | 211 | 1.27e-106 | 305 |
| MS.gene58166.t1 | AT4G09720 | 67.757 | 214 | 57 | 2 | 8 | 209 | 4 | 217 | 2.12e-106 | 305 |
| MS.gene58166.t1 | AT2G21880 | 70.000 | 210 | 57 | 2 | 6 | 209 | 3 | 212 | 6.38e-103 | 296 |
| MS.gene58166.t1 | AT1G52280 | 67.317 | 205 | 66 | 1 | 6 | 209 | 2 | 206 | 9.58e-103 | 295 |
| MS.gene58166.t1 | AT3G16100 | 66.341 | 205 | 68 | 1 | 6 | 209 | 2 | 206 | 1.73e-101 | 292 |
| MS.gene58166.t1 | AT3G18820 | 67.488 | 203 | 65 | 1 | 8 | 209 | 4 | 206 | 3.67e-100 | 289 |
| MS.gene58166.t1 | AT1G49300 | 66.176 | 204 | 68 | 1 | 7 | 209 | 3 | 206 | 1.13e-99 | 288 |
| MS.gene58166.t1 | AT1G49300 | 66.176 | 204 | 68 | 1 | 7 | 209 | 3 | 206 | 1.13e-99 | 288 |
| MS.gene58166.t1 | AT2G21880 | 66.190 | 210 | 57 | 3 | 6 | 209 | 3 | 204 | 4.12e-93 | 271 |
| MS.gene58166.t1 | AT2G21880 | 67.914 | 187 | 54 | 2 | 29 | 209 | 1 | 187 | 2.06e-88 | 258 |
| MS.gene58166.t1 | AT2G21880 | 67.914 | 187 | 54 | 2 | 29 | 209 | 1 | 187 | 2.06e-88 | 258 |
| MS.gene58166.t1 | AT4G09720 | 67.836 | 171 | 54 | 1 | 40 | 209 | 2 | 172 | 2.78e-87 | 255 |
| MS.gene58166.t1 | AT4G09720 | 67.836 | 171 | 54 | 1 | 40 | 209 | 2 | 172 | 2.78e-87 | 255 |
| MS.gene58166.t1 | AT4G09720 | 67.836 | 171 | 54 | 1 | 40 | 209 | 2 | 172 | 2.78e-87 | 255 |
| MS.gene58166.t1 | AT5G39620 | 53.695 | 203 | 92 | 1 | 9 | 209 | 2 | 204 | 8.55e-77 | 229 |
| MS.gene58166.t1 | AT3G12160 | 43.030 | 165 | 87 | 3 | 12 | 176 | 15 | 172 | 3.76e-39 | 134 |
| MS.gene58166.t1 | AT3G15060 | 41.111 | 180 | 95 | 4 | 12 | 187 | 13 | 185 | 1.39e-38 | 132 |
| MS.gene58166.t1 | AT5G60860 | 41.975 | 162 | 87 | 3 | 12 | 173 | 13 | 167 | 2.90e-38 | 132 |
| MS.gene58166.t1 | AT1G28550 | 41.975 | 162 | 87 | 3 | 12 | 173 | 13 | 167 | 5.04e-38 | 131 |
| MS.gene58166.t1 | AT2G33870 | 40.606 | 165 | 91 | 3 | 12 | 176 | 13 | 170 | 8.46e-38 | 130 |
| MS.gene58166.t1 | AT2G44610 | 36.364 | 209 | 109 | 6 | 14 | 209 | 11 | 208 | 1.74e-37 | 129 |
| MS.gene58166.t1 | AT5G10260 | 35.096 | 208 | 112 | 5 | 14 | 209 | 11 | 207 | 3.56e-37 | 129 |
| MS.gene58166.t1 | AT5G45750 | 39.655 | 174 | 95 | 3 | 12 | 185 | 13 | 176 | 7.21e-37 | 128 |
| MS.gene58166.t1 | AT5G47960 | 40.606 | 165 | 91 | 3 | 12 | 176 | 15 | 172 | 1.05e-36 | 128 |
| MS.gene58166.t1 | AT5G59840 | 39.326 | 178 | 100 | 3 | 12 | 188 | 15 | 185 | 1.10e-36 | 127 |
| MS.gene58166.t1 | AT3G53610 | 37.853 | 177 | 104 | 2 | 12 | 188 | 15 | 185 | 1.33e-36 | 127 |
| MS.gene58166.t1 | AT3G53610 | 37.853 | 177 | 104 | 2 | 12 | 188 | 15 | 185 | 1.33e-36 | 127 |
| MS.gene58166.t1 | AT3G53610 | 37.853 | 177 | 104 | 2 | 12 | 188 | 15 | 185 | 1.33e-36 | 127 |
| MS.gene58166.t1 | AT4G18430 | 38.788 | 165 | 94 | 3 | 12 | 176 | 13 | 170 | 3.27e-36 | 126 |
| MS.gene58166.t1 | AT1G05810 | 38.798 | 183 | 96 | 3 | 8 | 190 | 8 | 174 | 6.47e-36 | 125 |
| MS.gene58166.t1 | AT1G09630 | 38.788 | 165 | 94 | 3 | 12 | 176 | 12 | 169 | 7.32e-36 | 125 |
| MS.gene58166.t1 | AT2G43130 | 38.922 | 167 | 95 | 3 | 12 | 178 | 12 | 171 | 7.53e-36 | 125 |
| MS.gene58166.t1 | AT1G73640 | 38.043 | 184 | 98 | 5 | 12 | 186 | 13 | 189 | 1.08e-35 | 125 |
| MS.gene58166.t1 | AT5G59150 | 38.788 | 165 | 94 | 3 | 12 | 176 | 12 | 169 | 1.20e-35 | 125 |
| MS.gene58166.t1 | AT1G05810 | 38.798 | 183 | 96 | 3 | 8 | 190 | 54 | 220 | 1.78e-35 | 126 |
| MS.gene58166.t1 | AT5G45130 | 38.636 | 176 | 101 | 4 | 3 | 178 | 1 | 169 | 2.96e-35 | 124 |
| MS.gene58166.t1 | AT2G31680 | 38.323 | 167 | 96 | 2 | 12 | 178 | 12 | 171 | 4.90e-35 | 124 |
| MS.gene58166.t1 | AT3G46060 | 37.640 | 178 | 103 | 3 | 12 | 188 | 15 | 185 | 5.68e-35 | 123 |
| MS.gene58166.t1 | AT3G46060 | 37.640 | 178 | 103 | 3 | 12 | 188 | 15 | 185 | 5.68e-35 | 123 |
| MS.gene58166.t1 | AT3G46060 | 37.640 | 178 | 103 | 3 | 12 | 188 | 15 | 185 | 5.68e-35 | 123 |
| MS.gene58166.t1 | AT5G64990 | 37.321 | 209 | 107 | 8 | 14 | 209 | 9 | 206 | 8.23e-35 | 122 |
| MS.gene58166.t1 | AT5G65270 | 39.394 | 165 | 93 | 3 | 12 | 176 | 17 | 174 | 8.36e-35 | 123 |
| MS.gene58166.t1 | AT4G18800 | 38.889 | 162 | 92 | 2 | 12 | 173 | 13 | 167 | 1.05e-34 | 122 |
| MS.gene58166.t1 | AT2G22290 | 33.981 | 206 | 117 | 5 | 14 | 209 | 11 | 207 | 2.11e-34 | 121 |
| MS.gene58166.t1 | AT1G07410 | 35.882 | 170 | 102 | 3 | 7 | 176 | 7 | 169 | 2.79e-34 | 121 |
| MS.gene58166.t1 | AT4G35860 | 37.143 | 175 | 103 | 4 | 12 | 186 | 6 | 173 | 2.87e-34 | 121 |
| MS.gene58166.t1 | AT1G18200 | 39.394 | 165 | 93 | 4 | 12 | 176 | 13 | 170 | 4.32e-34 | 121 |
| MS.gene58166.t1 | AT1G16920 | 40.123 | 162 | 90 | 3 | 12 | 173 | 13 | 167 | 7.24e-34 | 120 |
| MS.gene58166.t1 | AT1G06400 | 38.889 | 162 | 92 | 2 | 12 | 173 | 13 | 167 | 7.48e-34 | 120 |
| MS.gene58166.t1 | AT4G17170 | 37.952 | 166 | 96 | 3 | 12 | 177 | 6 | 164 | 9.67e-34 | 120 |
| MS.gene58166.t1 | AT3G09900 | 36.683 | 199 | 118 | 3 | 12 | 208 | 15 | 207 | 9.96e-34 | 120 |
| MS.gene58166.t1 | AT4G19640 | 36.932 | 176 | 104 | 4 | 3 | 178 | 1 | 169 | 1.01e-33 | 119 |
| MS.gene58166.t1 | AT4G39990 | 37.654 | 162 | 94 | 3 | 12 | 173 | 17 | 171 | 1.04e-33 | 120 |
| MS.gene58166.t1 | AT4G39890 | 37.870 | 169 | 91 | 4 | 13 | 177 | 10 | 168 | 1.13e-33 | 120 |
| MS.gene58166.t1 | AT3G46830 | 36.364 | 165 | 98 | 3 | 12 | 176 | 12 | 169 | 1.66e-33 | 119 |
| MS.gene58166.t1 | AT3G46830 | 36.364 | 165 | 98 | 3 | 12 | 176 | 12 | 169 | 1.66e-33 | 119 |
| MS.gene58166.t1 | AT5G45130 | 39.264 | 163 | 92 | 4 | 16 | 178 | 22 | 177 | 6.66e-33 | 117 |
| MS.gene58166.t1 | AT4G17160 | 34.314 | 204 | 118 | 5 | 13 | 207 | 7 | 203 | 6.93e-33 | 117 |
| MS.gene58166.t1 | AT1G01200 | 38.650 | 163 | 94 | 3 | 12 | 174 | 28 | 184 | 6.94e-33 | 118 |
| MS.gene58166.t1 | AT1G02130 | 36.257 | 171 | 102 | 3 | 12 | 182 | 8 | 171 | 1.00e-32 | 117 |
| MS.gene58166.t1 | AT5G03520 | 38.542 | 192 | 100 | 5 | 12 | 202 | 15 | 189 | 1.09e-32 | 117 |
| MS.gene58166.t1 | AT3G07410 | 38.323 | 167 | 96 | 2 | 12 | 178 | 12 | 171 | 1.74e-32 | 117 |
| MS.gene58166.t1 | AT4G17530 | 36.970 | 165 | 97 | 2 | 12 | 176 | 8 | 165 | 1.90e-32 | 116 |
| MS.gene58166.t1 | AT5G47200 | 36.970 | 165 | 97 | 2 | 12 | 176 | 8 | 165 | 3.38e-32 | 115 |
| MS.gene58166.t1 | AT5G64990 | 36.111 | 216 | 107 | 9 | 14 | 209 | 9 | 213 | 3.99e-32 | 116 |
| MS.gene58166.t1 | AT3G11730 | 37.952 | 166 | 96 | 3 | 12 | 177 | 8 | 166 | 5.74e-32 | 115 |
| MS.gene58166.t1 | AT5G47520 | 35.329 | 167 | 101 | 3 | 12 | 178 | 14 | 173 | 1.33e-30 | 112 |
| MS.gene58166.t1 | AT4G19640 | 38.462 | 143 | 82 | 3 | 3 | 145 | 1 | 137 | 9.28e-29 | 105 |
| MS.gene58166.t1 | AT3G54840 | 35.714 | 168 | 100 | 5 | 9 | 175 | 30 | 190 | 1.74e-28 | 106 |
| MS.gene58166.t1 | AT4G19640 | 33.708 | 178 | 108 | 6 | 14 | 191 | 12 | 179 | 4.18e-28 | 105 |
| MS.gene58166.t1 | AT3G54840 | 35.088 | 171 | 103 | 5 | 9 | 178 | 30 | 193 | 7.83e-28 | 104 |
| MS.gene58166.t1 | AT3G54840 | 35.152 | 165 | 99 | 5 | 15 | 178 | 2 | 159 | 3.87e-27 | 102 |
| MS.gene58166.t1 | AT1G43890 | 39.634 | 164 | 89 | 6 | 12 | 173 | 13 | 168 | 5.14e-27 | 102 |
| MS.gene58166.t1 | AT1G43890 | 39.634 | 164 | 89 | 6 | 12 | 173 | 13 | 168 | 5.14e-27 | 102 |
| MS.gene58166.t1 | AT1G43890 | 39.634 | 164 | 89 | 6 | 12 | 173 | 13 | 168 | 5.14e-27 | 102 |
| MS.gene58166.t1 | AT5G03530 | 34.826 | 201 | 119 | 6 | 14 | 209 | 15 | 208 | 9.28e-27 | 102 |
| MS.gene58166.t1 | AT5G03530 | 34.826 | 201 | 119 | 6 | 14 | 209 | 15 | 208 | 9.28e-27 | 102 |
| MS.gene58166.t1 | AT5G20010 | 30.688 | 189 | 115 | 5 | 13 | 201 | 14 | 186 | 2.65e-26 | 101 |
| MS.gene58166.t1 | AT5G55190 | 31.325 | 166 | 104 | 3 | 13 | 178 | 14 | 169 | 3.25e-26 | 100 |
| MS.gene58166.t1 | AT5G20020 | 31.325 | 166 | 104 | 3 | 13 | 178 | 14 | 169 | 3.65e-26 | 100 |
| MS.gene58166.t1 | AT5G03520 | 38.462 | 156 | 78 | 5 | 48 | 202 | 41 | 179 | 2.91e-25 | 98.2 |
| MS.gene58166.t1 | AT5G55080 | 28.994 | 169 | 104 | 4 | 13 | 178 | 14 | 169 | 2.94e-23 | 93.2 |
| MS.gene58166.t1 | AT4G35860 | 36.090 | 133 | 78 | 4 | 54 | 186 | 2 | 127 | 7.64e-22 | 88.2 |
| MS.gene58166.t1 | AT5G59150 | 38.017 | 121 | 68 | 3 | 56 | 176 | 5 | 118 | 2.42e-20 | 84.3 |
| MS.gene58166.t1 | AT3G09910 | 35.185 | 162 | 97 | 6 | 13 | 173 | 14 | 168 | 3.54e-19 | 82.0 |
| MS.gene58166.t1 | AT3G09910 | 35.185 | 162 | 97 | 6 | 13 | 173 | 14 | 168 | 3.54e-19 | 82.0 |
| MS.gene58166.t1 | AT3G09910 | 35.185 | 162 | 97 | 6 | 13 | 173 | 14 | 168 | 3.54e-19 | 82.0 |
| MS.gene58166.t1 | AT3G09910 | 34.286 | 175 | 107 | 5 | 13 | 186 | 14 | 181 | 4.13e-19 | 81.6 |
| MS.gene58166.t1 | AT3G09910 | 34.286 | 175 | 107 | 5 | 13 | 186 | 14 | 181 | 4.13e-19 | 81.6 |
| MS.gene58166.t1 | AT4G28950 | 28.922 | 204 | 126 | 6 | 12 | 208 | 6 | 197 | 1.80e-18 | 80.5 |
| MS.gene58166.t1 | AT5G45970 | 29.944 | 177 | 111 | 4 | 12 | 180 | 6 | 177 | 1.91e-18 | 80.1 |
| MS.gene58166.t1 | AT2G44690 | 29.825 | 171 | 105 | 4 | 12 | 173 | 18 | 182 | 4.28e-17 | 76.6 |
| MS.gene58166.t1 | AT1G20090 | 28.652 | 178 | 112 | 4 | 12 | 180 | 5 | 176 | 1.11e-16 | 75.1 |
| MS.gene58166.t1 | AT1G75840 | 28.652 | 178 | 112 | 4 | 12 | 180 | 6 | 177 | 1.64e-16 | 74.7 |
| MS.gene58166.t1 | AT3G51300 | 30.000 | 170 | 106 | 3 | 12 | 173 | 6 | 170 | 1.94e-16 | 74.7 |
| MS.gene58166.t1 | AT2G17800 | 30.000 | 170 | 106 | 3 | 12 | 173 | 6 | 170 | 2.48e-16 | 74.3 |
| MS.gene58166.t1 | AT2G17800 | 30.000 | 170 | 106 | 3 | 12 | 173 | 6 | 170 | 2.48e-16 | 74.3 |
| MS.gene58166.t1 | AT4G35950 | 30.000 | 170 | 106 | 3 | 12 | 173 | 6 | 170 | 3.15e-16 | 73.9 |
| MS.gene58166.t1 | AT4G35020 | 27.684 | 177 | 113 | 4 | 12 | 179 | 6 | 176 | 1.16e-15 | 72.8 |
| MS.gene58166.t1 | AT4G35020 | 27.684 | 177 | 113 | 4 | 12 | 179 | 6 | 176 | 1.16e-15 | 72.8 |
| MS.gene58166.t1 | AT4G35020 | 27.684 | 177 | 113 | 4 | 12 | 179 | 6 | 176 | 1.16e-15 | 72.8 |
| MS.gene58166.t1 | AT3G48040 | 29.775 | 178 | 110 | 4 | 12 | 180 | 8 | 179 | 1.53e-15 | 72.4 |
| MS.gene58166.t1 | AT5G62880 | 29.825 | 171 | 105 | 4 | 12 | 173 | 8 | 172 | 3.25e-15 | 71.6 |
| MS.gene58166.t1 | AT3G48040 | 29.444 | 180 | 110 | 5 | 12 | 182 | 8 | 179 | 6.91e-15 | 70.1 |
| MS.gene58166.t1 | AT5G62880 | 29.480 | 173 | 107 | 4 | 12 | 175 | 8 | 174 | 1.02e-14 | 70.1 |
| MS.gene58166.t1 | AT4G35020 | 29.752 | 121 | 78 | 3 | 12 | 131 | 6 | 120 | 2.37e-12 | 62.4 |
| MS.gene58166.t1 | AT4G35020 | 29.752 | 121 | 78 | 3 | 12 | 131 | 6 | 120 | 2.37e-12 | 62.4 |
Find 45 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCAGAGGTTTCAAAATA+TGG | 0.212498 | 4.2:+10146814 | None:intergenic |
| CTAGGGAATGGTGTGCTTCT+AGG | 0.247665 | 4.2:-10146846 | MS.gene58166:CDS |
| GCATTTCCCTTTGTATTACT+TGG | 0.328430 | 4.2:-10147030 | MS.gene58166:CDS |
| AGGGGCAGATTGTTGTGTTT+TGG | 0.341202 | 4.2:-10147608 | MS.gene58166:CDS |
| GTCATTGTCCTTGGAGATAG+TGG | 0.363454 | 4.2:-10148501 | MS.gene58166:CDS |
| TGATAAACTCGTAACCTTGC+AGG | 0.369262 | 4.2:-10147796 | MS.gene58166:intron |
| CAACAGTATAAAGCCACAAT+TGG | 0.380292 | 4.2:-10147852 | MS.gene58166:CDS |
| CATTTGATACATTAAACAAT+TGG | 0.385874 | 4.2:-10147561 | MS.gene58166:CDS |
| TAGATGGTGGAAACAGTAGA+AGG | 0.386136 | 4.2:-10146993 | MS.gene58166:CDS |
| AAAATGCAGCTCCAAGACTA+TGG | 0.389043 | 4.2:+10147635 | None:intergenic |
| TTGCTTAAGGTCATTGTCCT+TGG | 0.394981 | 4.2:-10148510 | MS.gene58166:CDS |
| AACAGTATAAAGCCACAATT+GGG | 0.408620 | 4.2:-10147851 | MS.gene58166:CDS |
| TAGGGAATGGTGTGCTTCTA+GGG | 0.415556 | 4.2:-10146845 | MS.gene58166:CDS |
| CAGAAAGAGAACTTTGCTTA+AGG | 0.420667 | 4.2:-10148523 | MS.gene58166:CDS |
| CAATTGTGGCTTTATACTGT+TGG | 0.421726 | 4.2:+10147853 | None:intergenic |
| CTTTGTATTACTTGGGAACA+AGG | 0.440726 | 4.2:-10147022 | MS.gene58166:CDS |
| CTTCGTTGTTCTGCTTCTGA+AGG | 0.452987 | 4.2:+10146577 | None:intergenic |
| TTCGTTGTTCTGCTTCTGAA+GGG | 0.456355 | 4.2:+10146578 | None:intergenic |
| GGGAACAAGGTTGATATAGA+TGG | 0.470323 | 4.2:-10147009 | MS.gene58166:CDS |
| CAGGAAAGGTTCCATAGTCT+TGG | 0.475873 | 4.2:-10147646 | MS.gene58166:CDS |
| GCATGATGACTTTCTTAAGC+AGG | 0.480067 | 4.2:-10147539 | MS.gene58166:intron |
| AATTGATCTCAGGCAGATAC+AGG | 0.484106 | 4.2:-10147063 | MS.gene58166:intron |
| CATTTCCCTTTGTATTACTT+GGG | 0.485534 | 4.2:-10147029 | MS.gene58166:CDS |
| AGGTTACAGAGAAGAAAGCT+AGG | 0.511353 | 4.2:-10146864 | MS.gene58166:CDS |
| AATACAAAGGGAAATGCCTC+AGG | 0.512303 | 4.2:+10147036 | None:intergenic |
| TTTAAAATTACTCACCTGCA+AGG | 0.529499 | 4.2:+10147782 | None:intergenic |
| TTTGAAACCTCTGCAAAAGA+GGG | 0.539597 | 4.2:-10146808 | MS.gene58166:CDS |
| GATTTGGGATACTGCAGGAC+AGG | 0.541113 | 4.2:-10147665 | MS.gene58166:CDS |
| AACAAAATCAGCCCCAATTG+TGG | 0.543201 | 4.2:+10147839 | None:intergenic |
| CTTGTTCCCAAGTAATACAA+AGG | 0.556095 | 4.2:+10147023 | None:intergenic |
| TTTCTTGGCAGTTATTTCCG+TGG | 0.558899 | 4.2:-10146613 | MS.gene58166:intron |
| AACAAGGTTGATATAGATGG+TGG | 0.570432 | 4.2:-10147006 | MS.gene58166:CDS |
| CAGAGAAGAAAGCTAGGGAA+TGG | 0.574138 | 4.2:-10146858 | MS.gene58166:CDS |
| TTGTTCCCAAGTAATACAAA+GGG | 0.581722 | 4.2:+10147024 | None:intergenic |
| TCGTTGTTCTGCTTCTGAAG+GGG | 0.584150 | 4.2:+10146579 | None:intergenic |
| TGGCAGATTTGGGATACTGC+AGG | 0.587071 | 4.2:-10147670 | MS.gene58166:intron |
| GGGATACTGCAGGACAGGAA+AGG | 0.587274 | 4.2:-10147660 | MS.gene58166:CDS |
| AAGGGGTTTCAGATATTCCA+CGG | 0.600915 | 4.2:+10146596 | None:intergenic |
| GGTTACAGAGAAGAAAGCTA+GGG | 0.611053 | 4.2:-10146863 | MS.gene58166:CDS |
| TCATTGTCCTTGGAGATAGT+GGG | 0.622102 | 4.2:-10148500 | MS.gene58166:intron |
| AGATGGTGGAAACAGTAGAA+GGG | 0.623050 | 4.2:-10146992 | MS.gene58166:intron |
| TAACATACCCACTATCTCCA+AGG | 0.630039 | 4.2:+10148493 | None:intergenic |
| GGCAGATACAGGCAATCCTG+AGG | 0.655656 | 4.2:-10147052 | MS.gene58166:CDS |
| AGGGAATGGTGTGCTTCTAG+GGG | 0.665067 | 4.2:-10146844 | MS.gene58166:CDS |
| ACAGTATAAAGCCACAATTG+GGG | 0.725981 | 4.2:-10147850 | MS.gene58166:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATAGTACTTTTATTTTT+AGG | - | chr4.2:10147379-10147398 | MS.gene58166:intron | 10.0% |
| !!! | TTATAGTACTTTTATTTTTA+GGG | - | chr4.2:10147380-10147399 | MS.gene58166:intron | 10.0% |
| !! | AATTTACATTATCCTAAAAA+AGG | + | chr4.2:10147012-10147031 | None:intergenic | 15.0% |
| !! | ATGATATTATTATTACTTGA+TGG | - | chr4.2:10146672-10146691 | MS.gene58166:intron | 15.0% |
| !! | CAATTATAGAAAATATATTG+TGG | - | chr4.2:10147187-10147206 | MS.gene58166:intron | 15.0% |
| !!! | TATAGTACTTTTATTTTTAG+GGG | - | chr4.2:10147381-10147400 | MS.gene58166:intron | 15.0% |
| !!! | TCCAAATGATTAATTTTTTT+GGG | - | chr4.2:10146850-10146869 | MS.gene58166:CDS | 15.0% |
| !!! | TTCCAAATGATTAATTTTTT+TGG | - | chr4.2:10146849-10146868 | MS.gene58166:CDS | 15.0% |
| !! | AAAAAAGGAACAAAACAAAA+GGG | + | chr4.2:10146892-10146911 | None:intergenic | 20.0% |
| !! | AACAAAAATTTACAATGGTA+TGG | - | chr4.2:10147414-10147433 | MS.gene58166:intron | 20.0% |
| !! | CATTTGATACATTAAACAAT+TGG | - | chr4.2:10147543-10147562 | MS.gene58166:CDS | 20.0% |
| !! | GAATGAACAAAAATTTACAA+TGG | - | chr4.2:10147409-10147428 | MS.gene58166:intron | 20.0% |
| !! | TAAAAAAGGAACAAAACAAA+AGG | + | chr4.2:10146893-10146912 | None:intergenic | 20.0% |
| !! | TCCCAAAAAAATTAATCATT+TGG | + | chr4.2:10146854-10146873 | None:intergenic | 20.0% |
| !!! | AAACTTAAGTGATTTGTTTT+AGG | - | chr4.2:10146815-10146834 | MS.gene58166:CDS | 20.0% |
| !!! | AAATTCTGATATTTTGTTTC+AGG | - | chr4.2:10146722-10146741 | MS.gene58166:intron | 20.0% |
| !!! | AAATTTGGTCGTTTTAAAAA+AGG | + | chr4.2:10146907-10146926 | None:intergenic | 20.0% |
| !!! | AATTCTGATATTTTGTTTCA+GGG | - | chr4.2:10146723-10146742 | MS.gene58166:intron | 20.0% |
| !!! | AGAGAAATGTTTAAAATCAT+TGG | - | chr4.2:10147723-10147742 | MS.gene58166:intron | 20.0% |
| !!! | TAACTTTCTTTTTTCTTGTT+AGG | - | chr4.2:10148397-10148416 | MS.gene58166:intron | 20.0% |
| !!! | TTTAAAATCATTGGATCAAA+TGG | - | chr4.2:10147732-10147751 | MS.gene58166:intron | 20.0% |
| !!! | TTTTTTAAAACGACCAAATT+TGG | - | chr4.2:10146906-10146925 | MS.gene58166:intron | 20.0% |
| ! | AAATTATGGTATCTCACATT+TGG | - | chr4.2:10147160-10147179 | MS.gene58166:intron | 25.0% |
| ! | AACTTGTACAAATAGAAAAG+TGG | + | chr4.2:10147631-10147650 | None:intergenic | 25.0% |
| ! | ATAAAAAATCCAAATCCTGT+TGG | - | chr4.2:10148453-10148472 | MS.gene58166:intron | 25.0% |
| ! | ATATGCTGAAATTGGTTATA+CGG | - | chr4.2:10147117-10147136 | MS.gene58166:intron | 25.0% |
| ! | ATCTAAACATATGCTGAAAT+TGG | - | chr4.2:10147109-10147128 | MS.gene58166:intron | 25.0% |
| ! | GTTTAGATTGCATGTAAATT+TGG | + | chr4.2:10147097-10147116 | None:intergenic | 25.0% |
| ! | TAAGCTCACACAAAAAATTT+AGG | - | chr4.2:10148424-10148443 | MS.gene58166:intron | 25.0% |
| ! | TATCCTAAAAAAGGATCTAT+TGG | + | chr4.2:10147003-10147022 | None:intergenic | 25.0% |
| !!! | GTTTTATTGAAAATGCCAAA+TGG | + | chr4.2:10146778-10146797 | None:intergenic | 25.0% |
| !!! | TGACCAATATTGTTATTTCT+TGG | - | chr4.2:10148476-10148495 | MS.gene58166:intron | 25.0% |
| AACAGTATAAAGCCACAATT+GGG | - | chr4.2:10147253-10147272 | MS.gene58166:intron | 30.0% | |
| AATCATTGGATCAAATGGAA+CGG | - | chr4.2:10147737-10147756 | MS.gene58166:intron | 30.0% | |
| CATTTCCCTTTGTATTACTT+GGG | - | chr4.2:10148075-10148094 | MS.gene58166:intron | 30.0% | |
| CTGCCAAGAAATAACAATAT+TGG | + | chr4.2:10148482-10148501 | None:intergenic | 30.0% | |
| GACATGAAAACATATGAAGA+AGG | + | chr4.2:10146646-10146665 | None:intergenic | 30.0% | |
| GCAACAATTAAAAAGGCAAA+TGG | + | chr4.2:10148220-10148239 | None:intergenic | 30.0% | |
| GTAACCTGCAACAATTAAAA+AGG | + | chr4.2:10148227-10148246 | None:intergenic | 30.0% | |
| TAGATTGCATGTAAATTTGG+TGG | + | chr4.2:10147094-10147113 | None:intergenic | 30.0% | |
| TTGTTCCCAAGTAATACAAA+GGG | + | chr4.2:10148083-10148102 | None:intergenic | 30.0% | |
| TTTATCTTCCGATAGAATCT+TGG | - | chr4.2:10147911-10147930 | MS.gene58166:intron | 30.0% | |
| TTTGATGTGAAATTGATCTC+AGG | - | chr4.2:10148031-10148050 | MS.gene58166:intron | 30.0% | |
| TTTGCAGAGGTTTCAAAATA+TGG | + | chr4.2:10148293-10148312 | None:intergenic | 30.0% | |
| ! | TTGGCAATCTTTTTACTTGT+GGG | - | chr4.2:10146937-10146956 | MS.gene58166:intron | 30.0% |
| ! | TTTAAAATTACTCACCTGCA+AGG | + | chr4.2:10147325-10147344 | None:intergenic | 30.0% |
| !! | CATGGTTCAATTGATTTGAT+CGG | + | chr4.2:10147942-10147961 | None:intergenic | 30.0% |
| !! | TGATATTTTGTTTCAGGGTT+GGG | - | chr4.2:10146728-10146747 | MS.gene58166:intron | 30.0% |
| !! | TTTGCCTTTTTAATTGTTGC+AGG | - | chr4.2:10148220-10148239 | MS.gene58166:intron | 30.0% |
| !!! | AGTTGTTTTTGCTCTTTGTT+TGG | - | chr4.2:10147647-10147666 | MS.gene58166:CDS | 30.0% |
| !!! | TGTCCAATAGATCCTTTTTT+AGG | - | chr4.2:10146997-10147016 | MS.gene58166:CDS | 30.0% |
| ACAGTATAAAGCCACAATTG+GGG | - | chr4.2:10147254-10147273 | MS.gene58166:intron | 35.0% | |
| ATCCAAGTTACATTGCAGTT+GGG | - | chr4.2:10147794-10147813 | MS.gene58166:intron | 35.0% | |
| CAACAGTATAAAGCCACAAT+TGG | - | chr4.2:10147252-10147271 | MS.gene58166:intron | 35.0% | |
| CAGAAAGAGAACTTTGCTTA+AGG | - | chr4.2:10146581-10146600 | MS.gene58166:CDS | 35.0% | |
| CTTGTTCCCAAGTAATACAA+AGG | + | chr4.2:10148084-10148103 | None:intergenic | 35.0% | |
| CTTTGTATTACTTGGGAACA+AGG | - | chr4.2:10148082-10148101 | MS.gene58166:intron | 35.0% | |
| GCATTTCCCTTTGTATTACT+TGG | - | chr4.2:10148074-10148093 | MS.gene58166:intron | 35.0% | |
| GTGAACACTTTGCATGAAAA+AGG | + | chr4.2:10148198-10148217 | None:intergenic | 35.0% | |
| TAACAATATTGGTCACCAAC+AGG | + | chr4.2:10148471-10148490 | None:intergenic | 35.0% | |
| TACAATGGTATGGCAGATTT+GGG | - | chr4.2:10147424-10147443 | MS.gene58166:intron | 35.0% | |
| TGAAAATGCCAAATGGATAC+TGG | + | chr4.2:10146771-10146790 | None:intergenic | 35.0% | |
| TTACAATGGTATGGCAGATT+TGG | - | chr4.2:10147423-10147442 | MS.gene58166:intron | 35.0% | |
| TTGATGAACCAGTATCCATT+TGG | - | chr4.2:10146760-10146779 | MS.gene58166:CDS | 35.0% | |
| TTGCATACCCAAAATCGTAT+CGG | + | chr4.2:10147979-10147998 | None:intergenic | 35.0% | |
| ! | GTTGGCAATCTTTTTACTTG+TGG | - | chr4.2:10146936-10146955 | MS.gene58166:intron | 35.0% |
| ! | TGGCAATCTTTTTACTTGTG+GGG | - | chr4.2:10146938-10146957 | MS.gene58166:intron | 35.0% |
| ! | TTTGAAACCTCTGCAAAAGA+GGG | - | chr4.2:10148296-10148315 | MS.gene58166:intron | 35.0% |
| !! | AACAAGGTTGATATAGATGG+TGG | - | chr4.2:10148098-10148117 | MS.gene58166:intron | 35.0% |
| !! | CAATTGTGGCTTTATACTGT+TGG | + | chr4.2:10147254-10147273 | None:intergenic | 35.0% |
| !! | CTGATATTTTGTTTCAGGGT+TGG | - | chr4.2:10146727-10146746 | MS.gene58166:intron | 35.0% |
| !! | TAACTAGCTTTCGTTTCAAC+CGG | + | chr4.2:10147768-10147787 | None:intergenic | 35.0% |
| !!! | TTTTGAAACCTCTGCAAAAG+AGG | - | chr4.2:10148295-10148314 | MS.gene58166:intron | 35.0% |
| AAAATGCAGCTCCAAGACTA+TGG | + | chr4.2:10147472-10147491 | None:intergenic | 40.0% | |
| AACAAAATCAGCCCCAATTG+TGG | + | chr4.2:10147268-10147287 | None:intergenic | 40.0% | |
| AACCCAACTGCAATGTAACT+TGG | + | chr4.2:10147799-10147818 | None:intergenic | 40.0% | |
| AAGGGGTTTCAGATATTCCA+CGG | + | chr4.2:10148511-10148530 | None:intergenic | 40.0% | |
| AATACAAAGGGAAATGCCTC+AGG | + | chr4.2:10148071-10148090 | None:intergenic | 40.0% | |
| AATTGATCTCAGGCAGATAC+AGG | - | chr4.2:10148041-10148060 | MS.gene58166:intron | 40.0% | |
| AGGTTACAGAGAAGAAAGCT+AGG | - | chr4.2:10148240-10148259 | MS.gene58166:intron | 40.0% | |
| ATCAAATGGAACGGCTTAAC+CGG | - | chr4.2:10147746-10147765 | MS.gene58166:intron | 40.0% | |
| CGGTTCAACCAAGATTCTAT+CGG | + | chr4.2:10147922-10147941 | None:intergenic | 40.0% | |
| GATCCAAGTTACATTGCAGT+TGG | - | chr4.2:10147793-10147812 | MS.gene58166:intron | 40.0% | |
| GCATGATGACTTTCTTAAGC+AGG | - | chr4.2:10147565-10147584 | MS.gene58166:CDS | 40.0% | |
| GGTTACAGAGAAGAAAGCTA+GGG | - | chr4.2:10148241-10148260 | MS.gene58166:intron | 40.0% | |
| TAACATACCCACTATCTCCA+AGG | + | chr4.2:10146614-10146633 | None:intergenic | 40.0% | |
| TATTGGTCACCAACAGGATT+TGG | + | chr4.2:10148465-10148484 | None:intergenic | 40.0% | |
| TCATTGTCCTTGGAGATAGT+GGG | - | chr4.2:10146604-10146623 | MS.gene58166:CDS | 40.0% | |
| TGATAAACTCGTAACCTTGC+AGG | - | chr4.2:10147308-10147327 | MS.gene58166:intron | 40.0% | |
| TTCGTTGTTCTGCTTCTGAA+GGG | + | chr4.2:10148529-10148548 | None:intergenic | 40.0% | |
| TTGCTTAAGGTCATTGTCCT+TGG | - | chr4.2:10146594-10146613 | MS.gene58166:CDS | 40.0% | |
| ! | AAGTCTCACCGATACGATTT+TGG | - | chr4.2:10147968-10147987 | MS.gene58166:intron | 40.0% |
| ! | AATCGTATCGGTGAGACTTT+CGG | + | chr4.2:10147967-10147986 | None:intergenic | 40.0% |
| ! | AGTCTCACCGATACGATTTT+GGG | - | chr4.2:10147969-10147988 | MS.gene58166:intron | 40.0% |
| ! | ATCCATCATAATTTGCCAGC+TGG | + | chr4.2:10146978-10146997 | None:intergenic | 40.0% |
| ! | TTGGAGCTGCATTTTACAGA+GGG | - | chr4.2:10147477-10147496 | MS.gene58166:intron | 40.0% |
| ! | TTTCTTGGCAGTTATTTCCG+TGG | - | chr4.2:10148491-10148510 | MS.gene58166:intron | 40.0% |
| ! | TTTTTACTTGTGGGGAACAG+TGG | - | chr4.2:10146946-10146965 | MS.gene58166:intron | 40.0% |
| !! | ACCAAATTTGGTGCATGAGT+TGG | - | chr4.2:10146918-10146937 | MS.gene58166:intron | 40.0% |
| !! | AGATGGTGGAAACAGTAGAA+GGG | - | chr4.2:10148112-10148131 | MS.gene58166:intron | 40.0% |
| !! | GGGAACAAGGTTGATATAGA+TGG | - | chr4.2:10148095-10148114 | MS.gene58166:intron | 40.0% |
| !! | TAGATGGTGGAAACAGTAGA+AGG | - | chr4.2:10148111-10148130 | MS.gene58166:intron | 40.0% |
| !! | TGGGGCTGATTTTGTTACAA+AGG | - | chr4.2:10147272-10147291 | MS.gene58166:intron | 40.0% |
| CAGAGAAGAAAGCTAGGGAA+TGG | - | chr4.2:10148246-10148265 | MS.gene58166:intron | 45.0% | |
| CAGGAAAGGTTCCATAGTCT+TGG | - | chr4.2:10147458-10147477 | MS.gene58166:intron | 45.0% | |
| CTTCGTTGTTCTGCTTCTGA+AGG | + | chr4.2:10148530-10148549 | None:intergenic | 45.0% | |
| GCCAACTCATGCACCAAATT+TGG | + | chr4.2:10146922-10146941 | None:intergenic | 45.0% | |
| GTCATTGTCCTTGGAGATAG+TGG | - | chr4.2:10146603-10146622 | MS.gene58166:CDS | 45.0% | |
| GTCCAGCTGGCAAATTATGA+TGG | - | chr4.2:10146973-10146992 | MS.gene58166:intron | 45.0% | |
| TAGGGAATGGTGTGCTTCTA+GGG | - | chr4.2:10148259-10148278 | MS.gene58166:intron | 45.0% | |
| ! | AGGGGCAGATTGTTGTGTTT+TGG | - | chr4.2:10147496-10147515 | MS.gene58166:intron | 45.0% |
| ! | ATCGTATCGGTGAGACTTTC+GGG | + | chr4.2:10147966-10147985 | None:intergenic | 45.0% |
| ! | ATTGTAGCCCTCTTTTGCAG+AGG | + | chr4.2:10148306-10148325 | None:intergenic | 45.0% |
| ! | CTTGGAGCTGCATTTTACAG+AGG | - | chr4.2:10147476-10147495 | MS.gene58166:intron | 45.0% |
| ! | TCGTTGTTCTGCTTCTGAAG+GGG | + | chr4.2:10148528-10148547 | None:intergenic | 45.0% |
| ! | TGGAGCTGCATTTTACAGAG+GGG | - | chr4.2:10147478-10147497 | MS.gene58166:intron | 45.0% |
| !! | AATAATTGTAAAAAATAAAA+AGG | + | chr4.2:10148153-10148172 | None:intergenic | 5.0% |
| !!! | AAATTTTTAACATAAAATTA+TGG | - | chr4.2:10147146-10147165 | MS.gene58166:intron | 5.0% |
| AGGGAATGGTGTGCTTCTAG+GGG | - | chr4.2:10148260-10148279 | MS.gene58166:intron | 50.0% | |
| CTAGGGAATGGTGTGCTTCT+AGG | - | chr4.2:10148258-10148277 | MS.gene58166:intron | 50.0% | |
| ! | GATTTGGGATACTGCAGGAC+AGG | - | chr4.2:10147439-10147458 | MS.gene58166:intron | 50.0% |
| ! | TGGCAGATTTGGGATACTGC+AGG | - | chr4.2:10147434-10147453 | MS.gene58166:intron | 50.0% |
| GAACAGTGGTTCAGTCCAGC+TGG | - | chr4.2:10146960-10146979 | MS.gene58166:intron | 55.0% | |
| GGCAGATACAGGCAATCCTG+AGG | - | chr4.2:10148052-10148071 | MS.gene58166:intron | 55.0% | |
| GGGATACTGCAGGACAGGAA+AGG | - | chr4.2:10147444-10147463 | MS.gene58166:intron | 55.0% | |
| ! | TCGGTGAGACTTTCGGGTCA+TGG | + | chr4.2:10147960-10147979 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 10146561 | 10148565 | 10146561 | ID=MS.gene58166 |
| chr4.2 | mRNA | 10146561 | 10148565 | 10146561 | ID=MS.gene58166.t1;Parent=MS.gene58166 |
| chr4.2 | exon | 10148501 | 10148565 | 10148501 | ID=MS.gene58166.t1.exon1;Parent=MS.gene58166.t1 |
| chr4.2 | CDS | 10148501 | 10148565 | 10148501 | ID=cds.MS.gene58166.t1;Parent=MS.gene58166.t1 |
| chr4.2 | exon | 10148356 | 10148382 | 10148356 | ID=MS.gene58166.t1.exon2;Parent=MS.gene58166.t1 |
| chr4.2 | CDS | 10148356 | 10148382 | 10148356 | ID=cds.MS.gene58166.t1;Parent=MS.gene58166.t1 |
| chr4.2 | exon | 10147797 | 10147896 | 10147797 | ID=MS.gene58166.t1.exon3;Parent=MS.gene58166.t1 |
| chr4.2 | CDS | 10147797 | 10147896 | 10147797 | ID=cds.MS.gene58166.t1;Parent=MS.gene58166.t1 |
| chr4.2 | exon | 10147540 | 10147686 | 10147540 | ID=MS.gene58166.t1.exon4;Parent=MS.gene58166.t1 |
| chr4.2 | CDS | 10147540 | 10147686 | 10147540 | ID=cds.MS.gene58166.t1;Parent=MS.gene58166.t1 |
| chr4.2 | exon | 10146993 | 10147073 | 10146993 | ID=MS.gene58166.t1.exon5;Parent=MS.gene58166.t1 |
| chr4.2 | CDS | 10146993 | 10147073 | 10146993 | ID=cds.MS.gene58166.t1;Parent=MS.gene58166.t1 |
| chr4.2 | exon | 10146739 | 10146884 | 10146739 | ID=MS.gene58166.t1.exon6;Parent=MS.gene58166.t1 |
| chr4.2 | CDS | 10146739 | 10146884 | 10146739 | ID=cds.MS.gene58166.t1;Parent=MS.gene58166.t1 |
| chr4.2 | exon | 10146561 | 10146624 | 10146561 | ID=MS.gene58166.t1.exon7;Parent=MS.gene58166.t1 |
| chr4.2 | CDS | 10146561 | 10146624 | 10146561 | ID=cds.MS.gene58166.t1;Parent=MS.gene58166.t1 |
| Gene Sequence |
| Protein sequence |
