Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58277.t1 | XP_003609438.2 | 79.9 | 623 | 14 | 1 | 1 | 512 | 171 | 793 | 4.90E-257 | 896.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58277.t1 | Q6S5G3 | 45.4 | 623 | 221 | 5 | 1 | 511 | 160 | 775 | 3.5e-147 | 523.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58277.t1 | A0A072USQ8 | 79.9 | 623 | 14 | 1 | 1 | 512 | 36 | 658 | 3.5e-257 | 896.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene58277 | 0.811928 | 5.48E-51 | -1.69E-46 |
| MS.gene049491 | MS.gene58277 | 0.823028 | 1.73E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene58277 | 0.802018 | 6.85E-49 | -1.69E-46 |
| MS.gene049662 | MS.gene58277 | 0.802276 | 6.06E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene58277 | 0.826783 | 2.24E-54 | -1.69E-46 |
| MS.gene050076 | MS.gene58277 | 0.818792 | 1.63E-52 | -1.69E-46 |
| MS.gene050128 | MS.gene58277 | 0.813243 | 2.82E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene58277 | 0.814843 | 1.25E-51 | -1.69E-46 |
| MS.gene050404 | MS.gene58277 | 0.807228 | 5.60E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene58277 | 0.82417 | 9.33E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene58277 | 0.801399 | 9.17E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene58277 | 0.802123 | 6.51E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene58277 | 0.805911 | 1.06E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene58277 | 0.870913 | 1.02E-66 | -1.69E-46 |
| MS.gene052078 | MS.gene58277 | 0.817882 | 2.62E-52 | -1.69E-46 |
| MS.gene052178 | MS.gene58277 | 0.825889 | 3.66E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene58277 | 0.836315 | 1.01E-56 | -1.69E-46 |
| MS.gene052290 | MS.gene58277 | 0.840482 | 8.47E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene58277 | 0.862314 | 5.53E-64 | -1.69E-46 |
| MS.gene052326 | MS.gene58277 | 0.840302 | 9.44E-58 | -1.69E-46 |
| MS.gene052340 | MS.gene58277 | 0.829691 | 4.47E-55 | -1.69E-46 |
| MS.gene053073 | MS.gene58277 | 0.816552 | 5.22E-52 | -1.69E-46 |
| MS.gene053103 | MS.gene58277 | 0.800181 | 1.63E-48 | -1.69E-46 |
| MS.gene053557 | MS.gene58277 | 0.860137 | 2.55E-63 | -1.69E-46 |
| MS.gene053836 | MS.gene58277 | 0.809303 | 2.02E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene58277 | 0.86427 | 1.37E-64 | -1.69E-46 |
| MS.gene054376 | MS.gene58277 | 0.813015 | 3.17E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene58277 | 0.83721 | 5.94E-57 | -1.69E-46 |
| MS.gene055397 | MS.gene58277 | 0.800026 | 1.75E-48 | -1.69E-46 |
| MS.gene055422 | MS.gene58277 | 0.818427 | 1.97E-52 | -1.69E-46 |
| MS.gene055428 | MS.gene58277 | 0.827265 | 1.72E-54 | -1.69E-46 |
| MS.gene055896 | MS.gene58277 | 0.854813 | 9.59E-62 | -1.69E-46 |
| MS.gene056609 | MS.gene58277 | 0.84915 | 3.89E-60 | -1.69E-46 |
| MS.gene056612 | MS.gene58277 | 0.819618 | 1.06E-52 | -1.69E-46 |
| MS.gene056719 | MS.gene58277 | 0.824703 | 6.99E-54 | -1.69E-46 |
| MS.gene05702 | MS.gene58277 | 0.827927 | 1.19E-54 | -1.69E-46 |
| MS.gene057123 | MS.gene58277 | 0.812051 | 5.15E-51 | -1.69E-46 |
| MS.gene057927 | MS.gene58277 | 0.833853 | 4.20E-56 | -1.69E-46 |
| MS.gene058002 | MS.gene58277 | 0.80653 | 7.87E-50 | -1.69E-46 |
| MS.gene058082 | MS.gene58277 | 0.80886 | 2.52E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene58277 | 0.806977 | 6.33E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene58277 | 0.830604 | 2.67E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene58277 | 0.816466 | 5.45E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene58277 | 0.839538 | 1.49E-57 | -1.69E-46 |
| MS.gene059597 | MS.gene58277 | 0.858694 | 6.91E-63 | -1.69E-46 |
| MS.gene05959 | MS.gene58277 | 0.862752 | 4.06E-64 | -1.69E-46 |
| MS.gene059676 | MS.gene58277 | 0.839179 | 1.85E-57 | -1.69E-46 |
| MS.gene059692 | MS.gene58277 | 0.804439 | 2.16E-49 | -1.69E-46 |
| MS.gene059708 | MS.gene58277 | 0.854128 | 1.51E-61 | -1.69E-46 |
| MS.gene059894 | MS.gene58277 | 0.87004 | 1.97E-66 | -1.69E-46 |
| MS.gene059960 | MS.gene58277 | 0.821679 | 3.55E-53 | -1.69E-46 |
| MS.gene060407 | MS.gene58277 | 0.817193 | 3.74E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene58277 | 0.808614 | 2.84E-50 | -1.69E-46 |
| MS.gene060818 | MS.gene58277 | 0.811334 | 7.37E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene58277 | 0.816462 | 5.46E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene58277 | 0.831925 | 1.27E-55 | -1.69E-46 |
| MS.gene061051 | MS.gene58277 | -0.846002 | 2.85E-59 | -1.69E-46 |
| MS.gene061112 | MS.gene58277 | 0.80328 | 3.76E-49 | -1.69E-46 |
| MS.gene061265 | MS.gene58277 | 0.805331 | 1.41E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58277.t1 | MTR_4g115710 | 99.035 | 311 | 3 | 0 | 202 | 512 | 482 | 792 | 0.0 | 642 |
| MS.gene58277.t1 | MTR_4g115710 | 99.010 | 202 | 2 | 0 | 1 | 202 | 170 | 371 | 2.44e-141 | 426 |
| MS.gene58277.t1 | MTR_4g115710 | 99.035 | 311 | 3 | 0 | 202 | 512 | 483 | 793 | 0.0 | 642 |
| MS.gene58277.t1 | MTR_4g115710 | 99.010 | 202 | 2 | 0 | 1 | 202 | 171 | 372 | 2.32e-141 | 426 |
| MS.gene58277.t1 | MTR_4g115710 | 99.035 | 311 | 3 | 0 | 202 | 512 | 438 | 748 | 0.0 | 642 |
| MS.gene58277.t1 | MTR_4g115710 | 99.010 | 202 | 2 | 0 | 1 | 202 | 126 | 327 | 8.27e-142 | 426 |
| MS.gene58277.t1 | MTR_4g115710 | 99.035 | 311 | 3 | 0 | 202 | 512 | 348 | 658 | 0.0 | 640 |
| MS.gene58277.t1 | MTR_4g115710 | 99.010 | 202 | 2 | 0 | 1 | 202 | 36 | 237 | 1.69e-142 | 425 |
| MS.gene58277.t1 | MTR_2g030630 | 54.271 | 199 | 90 | 1 | 4 | 202 | 701 | 898 | 3.83e-68 | 238 |
| MS.gene58277.t1 | MTR_2g030630 | 41.346 | 312 | 176 | 4 | 202 | 507 | 1016 | 1326 | 1.37e-65 | 231 |
| MS.gene58277.t1 | MTR_8g088370 | 41.424 | 309 | 172 | 4 | 205 | 506 | 1066 | 1372 | 2.01e-64 | 227 |
| MS.gene58277.t1 | MTR_8g088370 | 49.010 | 202 | 97 | 2 | 6 | 202 | 741 | 941 | 3.70e-57 | 206 |
| MS.gene58277.t1 | MTR_2g030160 | 39.672 | 305 | 180 | 3 | 205 | 506 | 534 | 837 | 3.40e-61 | 216 |
| MS.gene58277.t1 | MTR_2g030160 | 45.588 | 204 | 105 | 2 | 4 | 202 | 206 | 408 | 4.09e-50 | 184 |
| MS.gene58277.t1 | MTR_4g119910 | 45.274 | 201 | 104 | 2 | 6 | 201 | 622 | 821 | 2.78e-49 | 182 |
| MS.gene58277.t1 | MTR_7g088050 | 31.500 | 200 | 123 | 4 | 7 | 201 | 39 | 229 | 7.33e-21 | 94.0 |
| MS.gene58277.t1 | MTR_3g090160 | 27.473 | 273 | 172 | 7 | 7 | 272 | 40 | 293 | 7.75e-21 | 94.0 |
| MS.gene58277.t1 | MTR_7g088050 | 30.102 | 196 | 123 | 4 | 7 | 197 | 39 | 225 | 1.80e-18 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58277.t1 | AT5G20300 | 54.369 | 309 | 134 | 3 | 202 | 509 | 343 | 645 | 4.62e-114 | 352 |
| MS.gene58277.t1 | AT5G20300 | 63.184 | 201 | 73 | 1 | 1 | 201 | 32 | 231 | 2.39e-89 | 288 |
| MS.gene58277.t1 | AT5G20300 | 54.369 | 309 | 134 | 3 | 202 | 509 | 471 | 773 | 1.54e-112 | 352 |
| MS.gene58277.t1 | AT5G20300 | 63.184 | 201 | 73 | 1 | 1 | 201 | 160 | 359 | 7.84e-88 | 286 |
| MS.gene58277.t1 | AT5G20300 | 54.369 | 309 | 134 | 3 | 202 | 509 | 471 | 773 | 1.54e-112 | 352 |
| MS.gene58277.t1 | AT5G20300 | 63.184 | 201 | 73 | 1 | 1 | 201 | 160 | 359 | 7.84e-88 | 286 |
| MS.gene58277.t1 | AT5G20300 | 54.369 | 309 | 134 | 3 | 202 | 509 | 471 | 773 | 1.54e-112 | 352 |
| MS.gene58277.t1 | AT5G20300 | 63.184 | 201 | 73 | 1 | 1 | 201 | 160 | 359 | 7.84e-88 | 286 |
| MS.gene58277.t1 | AT5G20300 | 54.369 | 309 | 134 | 3 | 202 | 509 | 471 | 773 | 1.54e-112 | 352 |
| MS.gene58277.t1 | AT5G20300 | 63.184 | 201 | 73 | 1 | 1 | 201 | 160 | 359 | 7.84e-88 | 286 |
| MS.gene58277.t1 | AT2G16640 | 40.385 | 312 | 179 | 4 | 202 | 507 | 885 | 1195 | 3.51e-70 | 244 |
| MS.gene58277.t1 | AT2G16640 | 54.271 | 199 | 90 | 1 | 4 | 202 | 571 | 768 | 1.85e-65 | 230 |
| MS.gene58277.t1 | AT2G16640 | 40.385 | 312 | 179 | 4 | 202 | 507 | 885 | 1195 | 3.51e-70 | 244 |
| MS.gene58277.t1 | AT2G16640 | 54.271 | 199 | 90 | 1 | 4 | 202 | 571 | 768 | 1.85e-65 | 230 |
| MS.gene58277.t1 | AT2G16640 | 40.385 | 312 | 179 | 4 | 202 | 507 | 885 | 1195 | 3.51e-70 | 244 |
| MS.gene58277.t1 | AT2G16640 | 54.271 | 199 | 90 | 1 | 4 | 202 | 571 | 768 | 1.85e-65 | 230 |
| MS.gene58277.t1 | AT3G16620 | 39.744 | 312 | 181 | 4 | 202 | 507 | 767 | 1077 | 9.29e-69 | 239 |
| MS.gene58277.t1 | AT3G16620 | 55.276 | 199 | 88 | 1 | 4 | 202 | 453 | 650 | 2.49e-67 | 235 |
| MS.gene58277.t1 | AT4G02510 | 40.000 | 305 | 175 | 4 | 205 | 502 | 1180 | 1483 | 2.70e-60 | 215 |
| MS.gene58277.t1 | AT4G02510 | 49.756 | 205 | 97 | 2 | 3 | 202 | 851 | 1054 | 1.23e-57 | 207 |
| MS.gene58277.t1 | AT4G02510 | 40.000 | 305 | 175 | 4 | 205 | 502 | 1180 | 1483 | 2.70e-60 | 215 |
| MS.gene58277.t1 | AT4G02510 | 49.756 | 205 | 97 | 2 | 3 | 202 | 851 | 1054 | 1.23e-57 | 207 |
| MS.gene58277.t1 | AT4G02510 | 40.000 | 305 | 175 | 4 | 205 | 502 | 1180 | 1483 | 2.70e-60 | 215 |
| MS.gene58277.t1 | AT4G02510 | 49.756 | 205 | 97 | 2 | 3 | 202 | 851 | 1054 | 1.23e-57 | 207 |
| MS.gene58277.t1 | AT4G02510 | 40.000 | 305 | 175 | 4 | 205 | 502 | 1180 | 1483 | 2.70e-60 | 215 |
| MS.gene58277.t1 | AT4G02510 | 49.756 | 205 | 97 | 2 | 3 | 202 | 851 | 1054 | 1.23e-57 | 207 |
| MS.gene58277.t1 | AT5G05000 | 33.000 | 200 | 120 | 4 | 7 | 201 | 38 | 228 | 4.68e-24 | 103 |
| MS.gene58277.t1 | AT5G05000 | 33.000 | 200 | 120 | 4 | 7 | 201 | 38 | 228 | 4.68e-24 | 103 |
| MS.gene58277.t1 | AT5G05000 | 33.000 | 200 | 120 | 4 | 7 | 201 | 38 | 228 | 4.68e-24 | 103 |
| MS.gene58277.t1 | AT1G02280 | 28.692 | 237 | 155 | 4 | 7 | 238 | 36 | 263 | 1.95e-23 | 100 |
| MS.gene58277.t1 | AT1G02280 | 28.692 | 237 | 155 | 4 | 7 | 238 | 36 | 263 | 1.95e-23 | 100 |
| MS.gene58277.t1 | AT4G15810 | 29.412 | 221 | 146 | 6 | 4 | 221 | 626 | 839 | 5.03e-15 | 78.6 |
Find 114 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTTCTCTTCACATTAT+TGG | 0.185965 | 8.3:+10672210 | None:intergenic |
| TAGCACTAACAGTTGCTTTC+AGG | 0.215246 | 8.3:+10670693 | None:intergenic |
| TCAGTGCCCTAGAAATATTT+TGG | 0.225345 | 8.3:-10671861 | MS.gene58277:CDS |
| AAACTCATAACCGAGGTATT+TGG | 0.236608 | 8.3:-10672076 | MS.gene58277:CDS |
| CGGCTTGATCTGATCAATTC+TGG | 0.269125 | 8.3:-10672121 | MS.gene58277:CDS |
| TGACAGTTCCCACAATTTCT+TGG | 0.276558 | 8.3:+10672284 | None:intergenic |
| TAATCTAAATAGTCGCAAAA+TGG | 0.302676 | 8.3:-10670672 | MS.gene58277:CDS |
| TCTGGTAACTGAACAGGTTC+TGG | 0.320411 | 8.3:+10671364 | None:intergenic |
| ATCTGTTGGTGGTAAAGATA+TGG | 0.331588 | 8.3:-10671050 | MS.gene58277:CDS |
| GGTGTTTCTTTGACATCTTT+CGG | 0.338289 | 8.3:-10670968 | MS.gene58277:CDS |
| GTATATCCGTTAGGTCCTTC+TGG | 0.339162 | 8.3:+10671998 | None:intergenic |
| CTTGAGGATACTTTGCTAAT+CGG | 0.340373 | 8.3:-10670920 | MS.gene58277:CDS |
| AGGTATTTGGTGCGGCAATC+TGG | 0.352278 | 8.3:-10672063 | MS.gene58277:CDS |
| GTAATTTACAATCTGAGTTC+AGG | 0.359349 | 8.3:-10670727 | MS.gene58277:CDS |
| CATTTGTTTCTTTAAGTAAA+GGG | 0.362091 | 8.3:+10671477 | None:intergenic |
| TGCTGGCCGTATGGAAGGTC+AGG | 0.366462 | 8.3:-10670873 | MS.gene58277:CDS |
| ACCTGTTCAGTTACCAGATA+TGG | 0.371990 | 8.3:-10671359 | MS.gene58277:CDS |
| GAAGGTTCTGTTACATAGAA+AGG | 0.373015 | 8.3:-10670579 | MS.gene58277:CDS |
| AATCTAAATAGTCGCAAAAT+GGG | 0.373823 | 8.3:-10670671 | MS.gene58277:CDS |
| TGATAATTCTGATGATCAAC+AGG | 0.375448 | 8.3:-10671392 | MS.gene58277:CDS |
| CTTAGAGGAACAGCCATATC+TGG | 0.378915 | 8.3:+10671346 | None:intergenic |
| GAACAGGTCTCACAAGTAAT+TGG | 0.381848 | 8.3:+10671272 | None:intergenic |
| ATACTTGTCCTTGGTAAAAC+AGG | 0.383290 | 8.3:-10672391 | MS.gene58277:CDS |
| GATCTCCAAACCTGTCCATT+AGG | 0.394376 | 8.3:+10671824 | None:intergenic |
| CAATCTGAATCAAAACTTAG+AGG | 0.397923 | 8.3:+10671331 | None:intergenic |
| TTAAAATTTGTGATTAATGC+TGG | 0.411220 | 8.3:-10670890 | MS.gene58277:CDS |
| GGGGAGAAAATCCTTCCTAA+TGG | 0.412001 | 8.3:-10671839 | MS.gene58277:CDS |
| TCAAAGTACAAAACGATGTC+TGG | 0.432440 | 8.3:+10672145 | None:intergenic |
| CCACATCGTGATCCCATCCT+TGG | 0.434462 | 8.3:+10671242 | None:intergenic |
| TCATTTGTTTCTTTAAGTAA+AGG | 0.434781 | 8.3:+10671476 | None:intergenic |
| CACATCGTGATCCCATCCTT+GGG | 0.436716 | 8.3:+10671243 | None:intergenic |
| GGCAGCTGGTATGCCTCAAT+TGG | 0.440174 | 8.3:-10672428 | None:intergenic |
| CACAATTTCTTGGATGCAAT+CGG | 0.444607 | 8.3:+10672294 | None:intergenic |
| GCCATATCTGGTAACTGAAC+AGG | 0.446797 | 8.3:+10671358 | None:intergenic |
| ATCAAATATAGAGTTTATAG+TGG | 0.457971 | 8.3:+10672354 | None:intergenic |
| ACCAAGGACAAGTATTCTGC+AGG | 0.459184 | 8.3:+10672399 | None:intergenic |
| GCTTAAGTTGTCATTTCTGA+TGG | 0.467696 | 8.3:+10670796 | None:intergenic |
| TCCTGCAGAATACTTGTCCT+TGG | 0.471790 | 8.3:-10672400 | MS.gene58277:CDS |
| AATTGAGAAAACTGCAACCA+AGG | 0.474454 | 8.3:+10670604 | None:intergenic |
| AAGAGAGGACTGTCATTGTC+AGG | 0.475241 | 8.3:+10670774 | None:intergenic |
| CATTATTGGTAGAGGAAGGC+AGG | 0.481129 | 8.3:+10672224 | None:intergenic |
| ATCAGGCAATGTTAGATTCA+AGG | 0.481132 | 8.3:-10671919 | MS.gene58277:CDS |
| TCTTGGATGCAATCGGTAGC+AGG | 0.484735 | 8.3:+10672301 | None:intergenic |
| CATCCTTGGGGATCAAGAAC+AGG | 0.487336 | 8.3:+10671256 | None:intergenic |
| GTAGAGGAAGGCAGGAAACC+AGG | 0.489089 | 8.3:+10672232 | None:intergenic |
| AAATTGTGGGAACTGTCAAC+GGG | 0.494864 | 8.3:-10672279 | MS.gene58277:CDS |
| GAAAATCCTTCCTAATGGAC+AGG | 0.496835 | 8.3:-10671834 | MS.gene58277:intron |
| TGAGCATTTACAAATTGCCT+TGG | 0.501650 | 8.3:-10670621 | MS.gene58277:CDS |
| TCTCTTCACATTATTGGTAG+AGG | 0.504702 | 8.3:+10672216 | None:intergenic |
| CGATTGCATCCAAGAAATTG+TGG | 0.509792 | 8.3:-10672293 | MS.gene58277:CDS |
| TGCAGCCTATGTCAATCCGA+TGG | 0.518557 | 8.3:-10671104 | MS.gene58277:CDS |
| GAAATTGTGGGAACTGTCAA+CGG | 0.521304 | 8.3:-10672280 | MS.gene58277:CDS |
| CTGTTCTTGATCCCCAAGGA+TGG | 0.521612 | 8.3:-10671255 | MS.gene58277:CDS |
| TATTTCTAGGGCACTGAGGA+TGG | 0.523674 | 8.3:+10671867 | None:intergenic |
| ATAACGTTTATTGATACCCC+TGG | 0.524878 | 8.3:-10672250 | MS.gene58277:CDS |
| AATGTATATGCCTCTGTTGT+GGG | 0.528781 | 8.3:-10671175 | MS.gene58277:CDS |
| AATACAGCAGTATATACATC+AGG | 0.529432 | 8.3:-10671936 | MS.gene58277:CDS |
| CTTAAGTTGTCATTTCTGAT+GGG | 0.530243 | 8.3:+10670797 | None:intergenic |
| CGGTTATGAGTTTCAAAAGT+GGG | 0.531512 | 8.3:+10672086 | None:intergenic |
| GTAACTTCTCCTTGCGTCTA+CGG | 0.535519 | 8.3:+10671443 | None:intergenic |
| GTCCTTGGTAAAACAGGAGT+TGG | 0.536410 | 8.3:-10672385 | MS.gene58277:CDS |
| ACAAATGCATAAGAATAAGC+AGG | 0.543429 | 8.3:-10671152 | MS.gene58277:CDS |
| TAATTAACAGTATATCCGTT+AGG | 0.548451 | 8.3:+10671989 | None:intergenic |
| ATAATGTGAAGAGAAATAAG+AGG | 0.552411 | 8.3:-10672207 | MS.gene58277:CDS |
| TTCACATTATTGGTAGAGGA+AGG | 0.558967 | 8.3:+10672220 | None:intergenic |
| GGTGTTGACGTTCAATCTGT+TGG | 0.564246 | 8.3:-10671064 | MS.gene58277:CDS |
| GAATGTATATGCCTCTGTTG+TGG | 0.564521 | 8.3:-10671176 | MS.gene58277:CDS |
| TCCAAACCTGTCCATTAGGA+AGG | 0.569812 | 8.3:+10671828 | None:intergenic |
| GGTCAGGGACAAGTGGCGCA+CGG | 0.574870 | 8.3:-10670857 | MS.gene58277:CDS |
| ATATACATTCTTCTTTACTT+CGG | 0.576190 | 8.3:+10671189 | None:intergenic |
| TAGAGGAAGGCAGGAAACCA+GGG | 0.579361 | 8.3:+10672233 | None:intergenic |
| CCGTCTCTTTATTGAAAGAG+AGG | 0.581560 | 8.3:+10670759 | None:intergenic |
| GATTGCATCCAAGAAATTGT+GGG | 0.583925 | 8.3:-10672292 | MS.gene58277:CDS |
| AGGACCCATCGGATTGACAT+AGG | 0.584731 | 8.3:+10671099 | None:intergenic |
| GTTGACGTTCAATCTGTTGG+TGG | 0.589125 | 8.3:-10671061 | MS.gene58277:CDS |
| TGTTCTTGATCCCCAAGGAT+GGG | 0.591666 | 8.3:-10671254 | MS.gene58277:CDS |
| ATGGGTCCTAGTTACTCTAT+CGG | 0.592824 | 8.3:-10671085 | MS.gene58277:CDS |
| TGTGATTAATGCTGGCCGTA+TGG | 0.596004 | 8.3:-10670882 | MS.gene58277:CDS |
| ATTAATGCTGGCCGTATGGA+AGG | 0.596929 | 8.3:-10670878 | MS.gene58277:CDS |
| CTACGTGGGTGCAAAACTTG+AGG | 0.597691 | 8.3:-10670936 | MS.gene58277:CDS |
| CCAAGGATGGGATCACGATG+TGG | 0.599335 | 8.3:-10671242 | MS.gene58277:CDS |
| AATAAAGAGACGGTGTTGAG+TGG | 0.600052 | 8.3:-10670749 | MS.gene58277:CDS |
| AGAAGAGTACCGTAGACGCA+AGG | 0.608546 | 8.3:-10671452 | MS.gene58277:CDS |
| GCAGCCTATGTCAATCCGAT+GGG | 0.610969 | 8.3:-10671103 | MS.gene58277:CDS |
| TATGGAAGGTCAGGGACAAG+TGG | 0.611077 | 8.3:-10670864 | MS.gene58277:CDS |
| TCGGTTATGAGTTTCAAAAG+TGG | 0.613599 | 8.3:+10672085 | None:intergenic |
| TCATCCTCATCTATTCCAGA+AGG | 0.615247 | 8.3:-10672013 | MS.gene58277:CDS |
| CTGCAGGAGAAGTCCAATTG+AGG | 0.616507 | 8.3:+10672415 | None:intergenic |
| CCTCTCTTTCAATAAAGAGA+CGG | 0.623279 | 8.3:-10670759 | MS.gene58277:CDS |
| TCTATTCCAGAAGGACCTAA+CGG | 0.628397 | 8.3:-10672004 | MS.gene58277:CDS |
| GGTCATTATCAACAAGGCAG+CGG | 0.634552 | 8.3:+10671293 | None:intergenic |
| AGGTCCTTCTGGAATAGATG+AGG | 0.635072 | 8.3:+10672009 | None:intergenic |
| TCAACACCGATAGAGTAACT+AGG | 0.636344 | 8.3:+10671079 | None:intergenic |
| CTTGTCCCTGACCTTCCATA+CGG | 0.638607 | 8.3:+10670867 | None:intergenic |
| ATCTAAATAGTCGCAAAATG+GGG | 0.642485 | 8.3:-10670670 | MS.gene58277:CDS |
| CAAGGATGGGATCACGATGT+GGG | 0.648192 | 8.3:-10671241 | MS.gene58277:CDS |
| ATGCATTTGTCCCACAACAG+AGG | 0.649384 | 8.3:+10671165 | None:intergenic |
| GGTAACTGAACAGGTTCTGG+AGG | 0.651243 | 8.3:+10671367 | None:intergenic |
| GCTGGCCGTATGGAAGGTCA+GGG | 0.656209 | 8.3:-10670872 | MS.gene58277:CDS |
| AGAGGAAGGCAGGAAACCAG+GGG | 0.656772 | 8.3:+10672234 | None:intergenic |
| CATAACCGAGGTATTTGGTG+CGG | 0.667741 | 8.3:-10672071 | MS.gene58277:CDS |
| AAGTACAAAACGATGTCTGG+AGG | 0.667898 | 8.3:+10672148 | None:intergenic |
| ATAGAGTAACTAGGACCCAT+CGG | 0.669102 | 8.3:+10671088 | None:intergenic |
| AGGTTGAAAAGCATTAGTCG+TGG | 0.671619 | 8.3:+10672321 | None:intergenic |
| CAGGGACAAGTGGCGCACGG+TGG | 0.672342 | 8.3:-10670854 | MS.gene58277:CDS |
| AGACCTGTTCTTGATCCCCA+AGG | 0.680894 | 8.3:-10671259 | MS.gene58277:CDS |
| ACATCGTGATCCCATCCTTG+GGG | 0.684919 | 8.3:+10671244 | None:intergenic |
| GATTGCCGCACCAAATACCT+CGG | 0.694787 | 8.3:+10672066 | None:intergenic |
| AAAATATTTCTAGGGCACTG+AGG | 0.697500 | 8.3:+10671863 | None:intergenic |
| TTCGGAAAGAAATACTACGT+GGG | 0.706299 | 8.3:-10670950 | MS.gene58277:CDS |
| GATAATTCTGATGATCAACA+GGG | 0.708450 | 8.3:-10671391 | MS.gene58277:CDS |
| GTAATTGGTCATTATCAACA+AGG | 0.716359 | 8.3:+10671287 | None:intergenic |
| TTTCGGAAAGAAATACTACG+TGG | 0.732414 | 8.3:-10670951 | MS.gene58277:CDS |
| AAGCACAACATTGCTGACTG+TGG | 0.737708 | 8.3:-10670989 | MS.gene58277:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATACATTCTTCTTTACTT+CGG | + | chr8.3:10671803-10671822 | None:intergenic | 20.0% |
| !! | ATCAAATATAGAGTTTATAG+TGG | + | chr8.3:10670638-10670657 | None:intergenic | 20.0% |
| !! | TTAAAATTTGTGATTAATGC+TGG | - | chr8.3:10672099-10672118 | MS.gene58277:CDS | 20.0% |
| !!! | CATTTGTTTCTTTAAGTAAA+GGG | + | chr8.3:10671515-10671534 | None:intergenic | 20.0% |
| !!! | TCATTTGTTTCTTTAAGTAA+AGG | + | chr8.3:10671516-10671535 | None:intergenic | 20.0% |
| ! | AAGAAGATTATCTGATGAAT+TGG | - | chr8.3:10671478-10671497 | MS.gene58277:CDS | 25.0% |
| ! | AATCTAAATAGTCGCAAAAT+GGG | - | chr8.3:10672318-10672337 | MS.gene58277:CDS | 25.0% |
| ! | ATAATGTGAAGAGAAATAAG+AGG | - | chr8.3:10670782-10670801 | MS.gene58277:CDS | 25.0% |
| ! | TAATCTAAATAGTCGCAAAA+TGG | - | chr8.3:10672317-10672336 | MS.gene58277:CDS | 25.0% |
| ! | TAATTAACAGTATATCCGTT+AGG | + | chr8.3:10671003-10671022 | None:intergenic | 25.0% |
| !! | ATAATCTTCTTTTTGCAACT+TGG | + | chr8.3:10671469-10671488 | None:intergenic | 25.0% |
| !! | CTTATTTCTCTTCACATTAT+TGG | + | chr8.3:10670782-10670801 | None:intergenic | 25.0% |
| AATACAGCAGTATATACATC+AGG | - | chr8.3:10671053-10671072 | MS.gene58277:CDS | 30.0% | |
| ACAAATGCATAAGAATAAGC+AGG | - | chr8.3:10671837-10671856 | MS.gene58277:CDS | 30.0% | |
| ATCATCAATTCCACTTTGAT+TGG | + | chr8.3:10671346-10671365 | None:intergenic | 30.0% | |
| ATCTAAATAGTCGCAAAATG+GGG | - | chr8.3:10672319-10672338 | MS.gene58277:CDS | 30.0% | |
| CAATCTGAATCAAAACTTAG+AGG | + | chr8.3:10671661-10671680 | None:intergenic | 30.0% | |
| GATAATTCTGATGATCAACA+GGG | - | chr8.3:10671598-10671617 | MS.gene58277:intron | 30.0% | |
| GTAATTGGTCATTATCAACA+AGG | + | chr8.3:10671705-10671724 | None:intergenic | 30.0% | |
| GTAATTTACAATCTGAGTTC+AGG | - | chr8.3:10672262-10672281 | MS.gene58277:CDS | 30.0% | |
| TATCTGATGAATTGGAATAC+AGG | - | chr8.3:10671486-10671505 | MS.gene58277:intron | 30.0% | |
| TGATAATTCTGATGATCAAC+AGG | - | chr8.3:10671597-10671616 | MS.gene58277:intron | 30.0% | |
| TTACTTTCAGACAAAGAAGA+AGG | - | chr8.3:10671381-10671400 | MS.gene58277:CDS | 30.0% | |
| ! | ACATCGTTTTGTACTTTGAA+CGG | - | chr8.3:10670848-10670867 | MS.gene58277:CDS | 30.0% |
| ! | ACTTGGACAACTTTTCAAAT+TGG | + | chr8.3:10671452-10671471 | None:intergenic | 30.0% |
| ! | CTTAAGTTGTCATTTCTGAT+GGG | + | chr8.3:10672195-10672214 | None:intergenic | 30.0% |
| ! | CTTGGACAACTTTTCAAATT+GGG | + | chr8.3:10671451-10671470 | None:intergenic | 30.0% |
| ! | TGCAGTTTTCTCAATTTTGA+AGG | - | chr8.3:10672392-10672411 | MS.gene58277:CDS | 30.0% |
| ! | TTTCAAATTGGGATTTTGTC+AGG | + | chr8.3:10671440-10671459 | None:intergenic | 30.0% |
| !! | CAATTTTGTGTTGCTATGAA+CGG | + | chr8.3:10671971-10671990 | None:intergenic | 30.0% |
| !! | TGGAATTGATGATGAAATTG+AGG | - | chr8.3:10671353-10671372 | MS.gene58277:CDS | 30.0% |
| AATGTATATGCCTCTGTTGT+GGG | - | chr8.3:10671814-10671833 | MS.gene58277:intron | 35.0% | |
| AATTGAGAAAACTGCAACCA+AGG | + | chr8.3:10672388-10672407 | None:intergenic | 35.0% | |
| ATAACGTTTATTGATACCCC+TGG | - | chr8.3:10670739-10670758 | MS.gene58277:CDS | 35.0% | |
| ATACTTGTCCTTGGTAAAAC+AGG | - | chr8.3:10670598-10670617 | MS.gene58277:CDS | 35.0% | |
| ATCAGGCAATGTTAGATTCA+AGG | - | chr8.3:10671070-10671089 | MS.gene58277:CDS | 35.0% | |
| ATTTACGTCACCTAGAACTT+TGG | + | chr8.3:10671217-10671236 | None:intergenic | 35.0% | |
| CACAATTTCTTGGATGCAAT+CGG | + | chr8.3:10670698-10670717 | None:intergenic | 35.0% | |
| CCTCTCTTTCAATAAAGAGA+CGG | - | chr8.3:10672230-10672249 | MS.gene58277:CDS | 35.0% | |
| CGGTTATGAGTTTCAAAAGT+GGG | + | chr8.3:10670906-10670925 | None:intergenic | 35.0% | |
| CTTGAGGATACTTTGCTAAT+CGG | - | chr8.3:10672069-10672088 | MS.gene58277:CDS | 35.0% | |
| GAAGGTTCTGTTACATAGAA+AGG | - | chr8.3:10672410-10672429 | MS.gene58277:CDS | 35.0% | |
| GATTGCATCCAAGAAATTGT+GGG | - | chr8.3:10670697-10670716 | MS.gene58277:CDS | 35.0% | |
| GGTGTTTCTTTGACATCTTT+CGG | - | chr8.3:10672021-10672040 | MS.gene58277:CDS | 35.0% | |
| TCAAAGTACAAAACGATGTC+TGG | + | chr8.3:10670847-10670866 | None:intergenic | 35.0% | |
| TCGGTTATGAGTTTCAAAAG+TGG | + | chr8.3:10670907-10670926 | None:intergenic | 35.0% | |
| TCTCTTCACATTATTGGTAG+AGG | + | chr8.3:10670776-10670795 | None:intergenic | 35.0% | |
| TGAGCATTTACAAATTGCCT+TGG | - | chr8.3:10672368-10672387 | MS.gene58277:CDS | 35.0% | |
| TGCATTTGTACCAAAGTTCT+AGG | - | chr8.3:10671204-10671223 | MS.gene58277:CDS | 35.0% | |
| TTCACATTATTGGTAGAGGA+AGG | + | chr8.3:10670772-10670791 | None:intergenic | 35.0% | |
| TTCGGAAAGAAATACTACGT+GGG | - | chr8.3:10672039-10672058 | MS.gene58277:CDS | 35.0% | |
| TTCTCCCCCAAAATATTTCT+AGG | + | chr8.3:10671138-10671157 | None:intergenic | 35.0% | |
| TTTCAGAATGGTGTGGAATT+AGG | - | chr8.3:10671249-10671268 | MS.gene58277:CDS | 35.0% | |
| TTTCGGAAAGAAATACTACG+TGG | - | chr8.3:10672038-10672057 | MS.gene58277:CDS | 35.0% | |
| ! | AAACTCATAACCGAGGTATT+TGG | - | chr8.3:10670913-10670932 | MS.gene58277:CDS | 35.0% |
| ! | AGTGCCCTAGAAATATTTTG+GGG | - | chr8.3:10671130-10671149 | MS.gene58277:CDS | 35.0% |
| ! | CAGTGCCCTAGAAATATTTT+GGG | - | chr8.3:10671129-10671148 | MS.gene58277:CDS | 35.0% |
| ! | GCTTAAGTTGTCATTTCTGA+TGG | + | chr8.3:10672196-10672215 | None:intergenic | 35.0% |
| ! | TCAGTGCCCTAGAAATATTT+TGG | - | chr8.3:10671128-10671147 | MS.gene58277:CDS | 35.0% |
| ! | TCTCCCCCAAAATATTTCTA+GGG | + | chr8.3:10671137-10671156 | None:intergenic | 35.0% |
| !! | AAAATATTTCTAGGGCACTG+AGG | + | chr8.3:10671129-10671148 | None:intergenic | 35.0% |
| !! | ACCATTCTGAAACTTAAGGA+GGG | + | chr8.3:10671241-10671260 | None:intergenic | 35.0% |
| !! | ATCTGTTGGTGGTAAAGATA+TGG | - | chr8.3:10671939-10671958 | MS.gene58277:CDS | 35.0% |
| !! | GGGTTTTGATGGTATAAACT+TGG | - | chr8.3:10671768-10671787 | MS.gene58277:intron | 35.0% |
| !!! | ACTTTTGAAACTCATAACCG+AGG | - | chr8.3:10670906-10670925 | MS.gene58277:CDS | 35.0% |
| !!! | AGTTTTGAAGCTTGTTTACG+AGG | - | chr8.3:10672159-10672178 | MS.gene58277:CDS | 35.0% |
| !!! | GTTTTGAAGCTTGTTTACGA+GGG | - | chr8.3:10672160-10672179 | MS.gene58277:CDS | 35.0% |
| !!! | TTTTGAAGCTTGTTTACGAG+GGG | - | chr8.3:10672161-10672180 | MS.gene58277:CDS | 35.0% |
| AAATTGTGGGAACTGTCAAC+GGG | - | chr8.3:10670710-10670729 | MS.gene58277:CDS | 40.0% | |
| AAGTACAAAACGATGTCTGG+AGG | + | chr8.3:10670844-10670863 | None:intergenic | 40.0% | |
| ACCTGTTCAGTTACCAGATA+TGG | - | chr8.3:10671630-10671649 | MS.gene58277:intron | 40.0% | |
| ATAGAGTAACTAGGACCCAT+CGG | + | chr8.3:10671904-10671923 | None:intergenic | 40.0% | |
| ATGGGTCCTAGTTACTCTAT+CGG | - | chr8.3:10671904-10671923 | MS.gene58277:CDS | 40.0% | |
| CCGTCTCTTTATTGAAAGAG+AGG | + | chr8.3:10672233-10672252 | None:intergenic | 40.0% | |
| CCTTAAGTTTCAGAATGGTG+TGG | - | chr8.3:10671242-10671261 | MS.gene58277:CDS | 40.0% | |
| CGATTGCATCCAAGAAATTG+TGG | - | chr8.3:10670696-10670715 | MS.gene58277:CDS | 40.0% | |
| GAAATTGTGGGAACTGTCAA+CGG | - | chr8.3:10670709-10670728 | MS.gene58277:CDS | 40.0% | |
| GAACAGGTCTCACAAGTAAT+TGG | + | chr8.3:10671720-10671739 | None:intergenic | 40.0% | |
| GAATGTATATGCCTCTGTTG+TGG | - | chr8.3:10671813-10671832 | MS.gene58277:intron | 40.0% | |
| TCAACACCGATAGAGTAACT+AGG | + | chr8.3:10671913-10671932 | None:intergenic | 40.0% | |
| TCATCCTCATCTATTCCAGA+AGG | - | chr8.3:10670976-10670995 | MS.gene58277:CDS | 40.0% | |
| TCCCTCCTTAAGTTTCAGAA+TGG | - | chr8.3:10671237-10671256 | MS.gene58277:CDS | 40.0% | |
| TCTATTCCAGAAGGACCTAA+CGG | - | chr8.3:10670985-10671004 | MS.gene58277:CDS | 40.0% | |
| TGACAGTTCCCACAATTTCT+TGG | + | chr8.3:10670708-10670727 | None:intergenic | 40.0% | |
| TTTGATTGGATACAGAGCGA+TGG | + | chr8.3:10671332-10671351 | None:intergenic | 40.0% | |
| TTTGTCAGGATTCGTATGGA+TGG | + | chr8.3:10671426-10671445 | None:intergenic | 40.0% | |
| ! | AATAAAGAGACGGTGTTGAG+TGG | - | chr8.3:10672240-10672259 | MS.gene58277:CDS | 40.0% |
| ! | GAAAATCCTTCCTAATGGAC+AGG | - | chr8.3:10671155-10671174 | MS.gene58277:CDS | 40.0% |
| ! | GGATTTTGTCAGGATTCGTA+TGG | + | chr8.3:10671430-10671449 | None:intergenic | 40.0% |
| ! | GGTTCTCAACAAAAAGTGCA+GGG | + | chr8.3:10671104-10671123 | None:intergenic | 40.0% |
| ! | TAGCACTAACAGTTGCTTTC+AGG | + | chr8.3:10672299-10672318 | None:intergenic | 40.0% |
| ! | TGGTTCTCAACAAAAAGTGC+AGG | + | chr8.3:10671105-10671124 | None:intergenic | 40.0% |
| ! | TTCCAACTCCTGTTTTACCA+AGG | + | chr8.3:10670609-10670628 | None:intergenic | 40.0% |
| !! | AGGTTGAAAAGCATTAGTCG+TGG | + | chr8.3:10670671-10670690 | None:intergenic | 40.0% |
| !! | CACCATTCTGAAACTTAAGG+AGG | + | chr8.3:10671242-10671261 | None:intergenic | 40.0% |
| !! | CCACACCATTCTGAAACTTA+AGG | + | chr8.3:10671245-10671264 | None:intergenic | 40.0% |
| !! | GTGCCCTAGAAATATTTTGG+GGG | - | chr8.3:10671131-10671150 | MS.gene58277:CDS | 40.0% |
| AAGAGAGGACTGTCATTGTC+AGG | + | chr8.3:10672218-10672237 | None:intergenic | 45.0% | |
| ACCAAGGACAAGTATTCTGC+AGG | + | chr8.3:10670593-10670612 | None:intergenic | 45.0% | |
| ATGCATTTGTCCCACAACAG+AGG | + | chr8.3:10671827-10671846 | None:intergenic | 45.0% | |
| ATTAATGCTGGCCGTATGGA+AGG | - | chr8.3:10672111-10672130 | MS.gene58277:CDS | 45.0% | |
| CATTATTGGTAGAGGAAGGC+AGG | + | chr8.3:10670768-10670787 | None:intergenic | 45.0% | |
| CGCTCTGTATCCAATCAAAG+TGG | - | chr8.3:10671333-10671352 | MS.gene58277:CDS | 45.0% | |
| CGGCTTGATCTGATCAATTC+TGG | - | chr8.3:10670868-10670887 | MS.gene58277:CDS | 45.0% | |
| CTTAGAGGAACAGCCATATC+TGG | + | chr8.3:10671646-10671665 | None:intergenic | 45.0% | |
| GATCTCCAAACCTGTCCATT+AGG | + | chr8.3:10671168-10671187 | None:intergenic | 45.0% | |
| GCCATATCTGGTAACTGAAC+AGG | + | chr8.3:10671634-10671653 | None:intergenic | 45.0% | |
| GGGGAGAAAATCCTTCCTAA+TGG | - | chr8.3:10671150-10671169 | MS.gene58277:CDS | 45.0% | |
| GGTCATTATCAACAAGGCAG+CGG | + | chr8.3:10671699-10671718 | None:intergenic | 45.0% | |
| GTAACTTCTCCTTGCGTCTA+CGG | + | chr8.3:10671549-10671568 | None:intergenic | 45.0% | |
| GTATATCCGTTAGGTCCTTC+TGG | + | chr8.3:10670994-10671013 | None:intergenic | 45.0% | |
| GTCCTTGGTAAAACAGGAGT+TGG | - | chr8.3:10670604-10670623 | MS.gene58277:CDS | 45.0% | |
| GTTGACGTTCAATCTGTTGG+TGG | - | chr8.3:10671928-10671947 | MS.gene58277:CDS | 45.0% | |
| TAACAGGGACGAAAGGAGAT+GGG | + | chr8.3:10671307-10671326 | None:intergenic | 45.0% | |
| TCCAAACCTGTCCATTAGGA+AGG | + | chr8.3:10671164-10671183 | None:intergenic | 45.0% | |
| TCCTGCAGAATACTTGTCCT+TGG | - | chr8.3:10670589-10670608 | MS.gene58277:CDS | 45.0% | |
| TCTGGTAACTGAACAGGTTC+TGG | + | chr8.3:10671628-10671647 | None:intergenic | 45.0% | |
| TGTGATTAATGCTGGCCGTA+TGG | - | chr8.3:10672107-10672126 | MS.gene58277:CDS | 45.0% | |
| TGTTCTTGATCCCCAAGGAT+GGG | - | chr8.3:10671735-10671754 | MS.gene58277:intron | 45.0% | |
| ! | AAGCACAACATTGCTGACTG+TGG | - | chr8.3:10672000-10672019 | MS.gene58277:CDS | 45.0% |
| ! | CATAACCGAGGTATTTGGTG+CGG | - | chr8.3:10670918-10670937 | MS.gene58277:CDS | 45.0% |
| ! | TCCTTCCTAATGGACAGGTT+TGG | - | chr8.3:10671160-10671179 | MS.gene58277:CDS | 45.0% |
| !! | AGGTCCTTCTGGAATAGATG+AGG | + | chr8.3:10670983-10671002 | None:intergenic | 45.0% |
| !! | GATCACGATGTGGGTTTTGA+TGG | - | chr8.3:10671757-10671776 | MS.gene58277:intron | 45.0% |
| !! | GGTGTTGACGTTCAATCTGT+TGG | - | chr8.3:10671925-10671944 | MS.gene58277:CDS | 45.0% |
| !! | TATTTCTAGGGCACTGAGGA+TGG | + | chr8.3:10671125-10671144 | None:intergenic | 45.0% |
| AACAGGGACGAAAGGAGATG+GGG | + | chr8.3:10671306-10671325 | None:intergenic | 50.0% | |
| ACATCGTGATCCCATCCTTG+GGG | + | chr8.3:10671748-10671767 | None:intergenic | 50.0% | |
| AGACCTGTTCTTGATCCCCA+AGG | - | chr8.3:10671730-10671749 | MS.gene58277:intron | 50.0% | |
| AGGACCCATCGGATTGACAT+AGG | + | chr8.3:10671893-10671912 | None:intergenic | 50.0% | |
| ATACAGAGCGATGGCGTAAC+AGG | + | chr8.3:10671323-10671342 | None:intergenic | 50.0% | |
| CAAGGATGGGATCACGATGT+GGG | - | chr8.3:10671748-10671767 | MS.gene58277:intron | 50.0% | |
| CACATCGTGATCCCATCCTT+GGG | + | chr8.3:10671749-10671768 | None:intergenic | 50.0% | |
| CATCCTTGGGGATCAAGAAC+AGG | + | chr8.3:10671736-10671755 | None:intergenic | 50.0% | |
| CTACGTGGGTGCAAAACTTG+AGG | - | chr8.3:10672053-10672072 | MS.gene58277:CDS | 50.0% | |
| CTGCAGGAGAAGTCCAATTG+AGG | + | chr8.3:10670577-10670596 | None:intergenic | 50.0% | |
| CTGTTCTTGATCCCCAAGGA+TGG | - | chr8.3:10671734-10671753 | MS.gene58277:intron | 50.0% | |
| CTTGTCCCTGACCTTCCATA+CGG | + | chr8.3:10672125-10672144 | None:intergenic | 50.0% | |
| GATTGCCGCACCAAATACCT+CGG | + | chr8.3:10670926-10670945 | None:intergenic | 50.0% | |
| GCAGCCTATGTCAATCCGAT+GGG | - | chr8.3:10671886-10671905 | MS.gene58277:CDS | 50.0% | |
| GTAACAGGGACGAAAGGAGA+TGG | + | chr8.3:10671308-10671327 | None:intergenic | 50.0% | |
| TACAGAGCGATGGCGTAACA+GGG | + | chr8.3:10671322-10671341 | None:intergenic | 50.0% | |
| TAGAGGAAGGCAGGAAACCA+GGG | + | chr8.3:10670759-10670778 | None:intergenic | 50.0% | |
| TATGGAAGGTCAGGGACAAG+TGG | - | chr8.3:10672125-10672144 | MS.gene58277:CDS | 50.0% | |
| TCTTGGATGCAATCGGTAGC+AGG | + | chr8.3:10670691-10670710 | None:intergenic | 50.0% | |
| TGCAGCCTATGTCAATCCGA+TGG | - | chr8.3:10671885-10671904 | MS.gene58277:CDS | 50.0% | |
| ! | GGTAACTGAACAGGTTCTGG+AGG | + | chr8.3:10671625-10671644 | None:intergenic | 50.0% |
| !! | AGAAGAGTACCGTAGACGCA+AGG | - | chr8.3:10671537-10671556 | MS.gene58277:intron | 50.0% |
| !! | AGGTATTTGGTGCGGCAATC+TGG | - | chr8.3:10670926-10670945 | MS.gene58277:CDS | 50.0% |
| AGAGGAAGGCAGGAAACCAG+GGG | + | chr8.3:10670758-10670777 | None:intergenic | 55.0% | |
| ATGGGGCAGAGAAGGAACTC+GGG | + | chr8.3:10671289-10671308 | None:intergenic | 55.0% | |
| CCAAGGATGGGATCACGATG+TGG | - | chr8.3:10671747-10671766 | MS.gene58277:intron | 55.0% | |
| CCACATCGTGATCCCATCCT+TGG | + | chr8.3:10671750-10671769 | None:intergenic | 55.0% | |
| GAAAGGAGATGGGGCAGAGA+AGG | + | chr8.3:10671297-10671316 | None:intergenic | 55.0% | |
| GATGGCGTAACAGGGACGAA+AGG | + | chr8.3:10671314-10671333 | None:intergenic | 55.0% | |
| GATGGGGCAGAGAAGGAACT+CGG | + | chr8.3:10671290-10671309 | None:intergenic | 55.0% | |
| GTAGAGGAAGGCAGGAAACC+AGG | + | chr8.3:10670760-10670779 | None:intergenic | 55.0% | |
| ! | GGAACTCGGGCACTGTTTGT+CGG | + | chr8.3:10671276-10671295 | None:intergenic | 55.0% |
| GCTGGCCGTATGGAAGGTCA+GGG | - | chr8.3:10672117-10672136 | MS.gene58277:CDS | 60.0% | |
| TGCTGGCCGTATGGAAGGTC+AGG | - | chr8.3:10672116-10672135 | MS.gene58277:CDS | 60.0% | |
| GGTCAGGGACAAGTGGCGCA+CGG | - | chr8.3:10672132-10672151 | MS.gene58277:CDS | 65.0% | |
| CAGGGACAAGTGGCGCACGG+TGG | - | chr8.3:10672135-10672154 | MS.gene58277:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 10670571 | 10672440 | 10670571 | ID=MS.gene58277 |
| chr8.3 | mRNA | 10670571 | 10672440 | 10670571 | ID=MS.gene58277.t1;Parent=MS.gene58277 |
| chr8.3 | exon | 10671835 | 10672440 | 10671835 | ID=MS.gene58277.t1.exon1;Parent=MS.gene58277.t1 |
| chr8.3 | CDS | 10671835 | 10672440 | 10671835 | ID=cds.MS.gene58277.t1;Parent=MS.gene58277.t1 |
| chr8.3 | exon | 10670571 | 10671503 | 10670571 | ID=MS.gene58277.t1.exon2;Parent=MS.gene58277.t1 |
| chr8.3 | CDS | 10670571 | 10671503 | 10670571 | ID=cds.MS.gene58277.t1;Parent=MS.gene58277.t1 |
| Gene Sequence |
| Protein sequence |
