Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60124.t1 | XP_003627843.1 | 95.3 | 192 | 9 | 0 | 1 | 192 | 1 | 192 | 2.30E-98 | 368.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60124.t1 | Q9LK88 | 74.9 | 187 | 47 | 0 | 5 | 191 | 10 | 196 | 5.3e-80 | 298.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60124.t1 | B7FMX0 | 95.3 | 192 | 9 | 0 | 1 | 192 | 1 | 192 | 1.6e-98 | 368.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene60124 | 0.806112 | 9.64E-50 | -1.69E-46 |
| MS.gene049150 | MS.gene60124 | 0.801004 | 1.10E-48 | -1.69E-46 |
| MS.gene049153 | MS.gene60124 | 0.813177 | 2.92E-51 | -1.69E-46 |
| MS.gene050398 | MS.gene60124 | 0.800545 | 1.37E-48 | -1.69E-46 |
| MS.gene050426 | MS.gene60124 | -0.830909 | 2.25E-55 | -1.69E-46 |
| MS.gene050464 | MS.gene60124 | 0.806071 | 9.83E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene60124 | 0.801585 | 8.40E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene60124 | 0.805244 | 1.47E-49 | -1.69E-46 |
| MS.gene051983 | MS.gene60124 | 0.822195 | 2.70E-53 | -1.69E-46 |
| MS.gene052011 | MS.gene60124 | -0.819952 | 8.86E-53 | -1.69E-46 |
| MS.gene052077 | MS.gene60124 | 0.841849 | 3.70E-58 | -1.69E-46 |
| MS.gene052135 | MS.gene60124 | 0.807261 | 5.51E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene60124 | 0.817477 | 3.23E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene60124 | 0.832302 | 1.02E-55 | -1.69E-46 |
| MS.gene05316 | MS.gene60124 | 0.829915 | 3.94E-55 | -1.69E-46 |
| MS.gene053494 | MS.gene60124 | 0.831388 | 1.72E-55 | -1.69E-46 |
| MS.gene054183 | MS.gene60124 | 0.834125 | 3.59E-56 | -1.69E-46 |
| MS.gene054349 | MS.gene60124 | 0.837648 | 4.59E-57 | -1.69E-46 |
| MS.gene054556 | MS.gene60124 | 0.806654 | 7.41E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene60124 | 0.80233 | 5.91E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene60124 | 0.847449 | 1.15E-59 | -1.69E-46 |
| MS.gene05556 | MS.gene60124 | 0.805126 | 1.55E-49 | -1.69E-46 |
| MS.gene056233 | MS.gene60124 | 0.835185 | 1.94E-56 | -1.69E-46 |
| MS.gene056447 | MS.gene60124 | 0.810042 | 1.40E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene60124 | 0.821663 | 3.58E-53 | -1.69E-46 |
| MS.gene056899 | MS.gene60124 | -0.811744 | 6.01E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene60124 | 0.815347 | 9.68E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene60124 | 0.839269 | 1.75E-57 | -1.69E-46 |
| MS.gene058142 | MS.gene60124 | 0.800474 | 1.42E-48 | -1.69E-46 |
| MS.gene059011 | MS.gene60124 | 0.814986 | 1.17E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene60124 | 0.803086 | 4.12E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene60124 | 0.819376 | 1.20E-52 | -1.69E-46 |
| MS.gene059462 | MS.gene60124 | 0.805972 | 1.03E-49 | -1.69E-46 |
| MS.gene059609 | MS.gene60124 | 0.820571 | 6.39E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene60124 | 0.816415 | 5.60E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene60124 | 0.809465 | 1.87E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene60124 | 0.863273 | 2.80E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60124.t1 | MTR_8g039090 | 95.312 | 192 | 9 | 0 | 1 | 192 | 1 | 192 | 5.43e-136 | 378 |
| MS.gene60124.t1 | MTR_3g019160 | 76.316 | 190 | 45 | 0 | 3 | 192 | 2 | 191 | 1.40e-108 | 308 |
| MS.gene60124.t1 | MTR_3g019090 | 71.579 | 190 | 54 | 0 | 3 | 192 | 2 | 191 | 2.76e-104 | 298 |
| MS.gene60124.t1 | MTR_3g019150 | 72.632 | 190 | 51 | 1 | 3 | 192 | 2 | 190 | 2.33e-101 | 290 |
| MS.gene60124.t1 | MTR_3g019120 | 62.304 | 191 | 69 | 1 | 3 | 190 | 2 | 192 | 6.79e-85 | 256 |
| MS.gene60124.t1 | MTR_3g019120 | 62.304 | 191 | 69 | 1 | 3 | 190 | 2 | 192 | 1.17e-83 | 256 |
| MS.gene60124.t1 | MTR_3g019090 | 71.831 | 142 | 40 | 0 | 51 | 192 | 1 | 142 | 8.30e-78 | 229 |
| MS.gene60124.t1 | MTR_3g019120 | 65.132 | 152 | 53 | 0 | 39 | 190 | 1 | 152 | 4.32e-71 | 223 |
| MS.gene60124.t1 | MTR_3g019150 | 75.000 | 100 | 25 | 0 | 93 | 192 | 35 | 134 | 1.21e-53 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60124.t1 | AT3G27890 | 74.866 | 187 | 47 | 0 | 5 | 191 | 10 | 196 | 1.26e-101 | 291 |
Find 43 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAAGTGGCAGCTCTTTC+TGG | 0.186880 | 8.4:+59202674 | MS.gene60124:CDS |
| CCATCATCATTGAACTTTGC+AGG | 0.314182 | 8.4:-59203952 | None:intergenic |
| CGTCTAGACCACCAAATGTT+TGG | 0.318819 | 8.4:+59203788 | MS.gene60124:CDS |
| CATTGAAGAATGCAATTGAT+TGG | 0.367565 | 8.4:+59203764 | MS.gene60124:CDS |
| GTCTAGACCACCAAATGTTT+GGG | 0.381599 | 8.4:+59203789 | MS.gene60124:CDS |
| GCTTTGCCAGCCCAAACATT+TGG | 0.411118 | 8.4:-59203799 | None:intergenic |
| CAATCAATTGCATTCTTCAA+TGG | 0.420729 | 8.4:-59203763 | None:intergenic |
| GCATTTACCCTAAGGCTTCA+AGG | 0.432027 | 8.4:+59204033 | MS.gene60124:CDS |
| ATTGAAGAATGCAATTGATT+GGG | 0.454057 | 8.4:+59203765 | MS.gene60124:CDS |
| TTGCCAGCCCAAACATTTGG+TGG | 0.456284 | 8.4:-59203796 | None:intergenic |
| ATAAGCACTGGAGGAGACTT+TGG | 0.465806 | 8.4:+59203832 | MS.gene60124:CDS |
| GCACTGGAGGAGACTTTGGC+GGG | 0.469020 | 8.4:+59203836 | MS.gene60124:CDS |
| AAGACGAACCAGCACGGATA+AGG | 0.470569 | 8.4:-59202727 | None:intergenic |
| CTTTGCAGGCATTTACCCTA+AGG | 0.478396 | 8.4:+59204025 | MS.gene60124:CDS |
| CATTCAGGCCTTATCCGTGC+TGG | 0.509003 | 8.4:+59202719 | MS.gene60124:CDS |
| CAACACTGATCTTGAAAACA+AGG | 0.510617 | 8.4:+59202907 | MS.gene60124:CDS |
| CCTGCAAAGTTCAATGATGA+TGG | 0.528301 | 8.4:+59203952 | MS.gene60124:CDS |
| GCAGCTGCAATCATAAGCAC+TGG | 0.542454 | 8.4:+59203820 | MS.gene60124:CDS |
| TTTGATTGATGAAGGGGCTA+AGG | 0.544643 | 8.4:+59203978 | MS.gene60124:CDS |
| GCAGCAATTGAGTTGAGTAA+AGG | 0.545033 | 8.4:+59202830 | MS.gene60124:intron |
| TTGAGTAAAGGAGCAATTGA+AGG | 0.546127 | 8.4:+59202842 | MS.gene60124:CDS |
| CAGCACGGATAAGGCCTGAA+TGG | 0.546637 | 8.4:-59202718 | None:intergenic |
| AGACCACCAAATGTTTGGGC+TGG | 0.554510 | 8.4:+59203793 | MS.gene60124:CDS |
| GATGGCGATTTGATTGATGA+AGG | 0.564435 | 8.4:+59203970 | MS.gene60124:CDS |
| GAGTATAACTACTCTGTCAC+AGG | 0.571097 | 8.4:+59203004 | MS.gene60124:CDS |
| CACTATCATCTACGCCAAGT+TGG | 0.576435 | 8.4:+59203868 | MS.gene60124:CDS |
| CGAAAAGCTTCAACAAGAGG+TGG | 0.582016 | 8.4:-59202938 | None:intergenic |
| TCAAGATCAGTGTTGTACAT+TGG | 0.583062 | 8.4:-59202899 | None:intergenic |
| GATCAATATAAATTCCAACT+TGG | 0.584290 | 8.4:-59203882 | None:intergenic |
| AGCACTGGAGGAGACTTTGG+CGG | 0.584571 | 8.4:+59203835 | MS.gene60124:CDS |
| TGGCGAAAAGCTTCAACAAG+AGG | 0.594853 | 8.4:-59202941 | None:intergenic |
| ATGGCGATTTGATTGATGAA+GGG | 0.608092 | 8.4:+59203971 | MS.gene60124:CDS |
| CAAAAGAAGACGAACCAGCA+CGG | 0.622016 | 8.4:-59202733 | None:intergenic |
| ACTGGAGGAGACTTTGGCGG+GGG | 0.627120 | 8.4:+59203838 | MS.gene60124:CDS |
| AATGCTCTTAGAAAGAACTC+AGG | 0.630349 | 8.4:-59203922 | None:intergenic |
| TCATCATTGAACTTTGCAGG+TGG | 0.635212 | 8.4:-59203949 | None:intergenic |
| GTGACAGAGTAGTTATACTC+AGG | 0.639364 | 8.4:-59203001 | None:intergenic |
| TGGCGATTTGATTGATGAAG+GGG | 0.641939 | 8.4:+59203972 | MS.gene60124:CDS |
| CACTGGAGGAGACTTTGGCG+GGG | 0.645839 | 8.4:+59203837 | MS.gene60124:CDS |
| GCTGCAATCATAAGCACTGG+AGG | 0.650272 | 8.4:+59203823 | MS.gene60124:CDS |
| TATCAGCTTGAAGAATCTTG+TGG | 0.652286 | 8.4:-59202961 | None:intergenic |
| AACACTGATCTTGAAAACAA+GGG | 0.673165 | 8.4:+59202908 | MS.gene60124:CDS |
| GGCAGCAGCAGTGATCAAAG+TGG | 0.706403 | 8.4:+59202661 | MS.gene60124:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTAATTAAAAAATTGAT+AGG | - | chr8.4:59203664-59203683 | None:intergenic | 10.0% |
| !! | TATTATATAAATAGTTGCAA+AGG | - | chr8.4:59203176-59203195 | None:intergenic | 15.0% |
| !! | AAAAAATTGATAGGTAGAAA+TGG | - | chr8.4:59203655-59203674 | None:intergenic | 20.0% |
| ! | AACCCAAAATATTGCAATTA+TGG | - | chr8.4:59203304-59203323 | None:intergenic | 25.0% |
| ! | ATATAAATAGTTGCAAAGGT+AGG | - | chr8.4:59203172-59203191 | None:intergenic | 25.0% |
| ! | ATGACATATTTGATTGCAAA+TGG | + | chr8.4:59203257-59203276 | MS.gene60124:intron | 25.0% |
| ! | ATTGAAGAATGCAATTGATT+GGG | + | chr8.4:59203765-59203784 | MS.gene60124:CDS | 25.0% |
| ! | GATCAATATAAATTCCAACT+TGG | - | chr8.4:59203885-59203904 | None:intergenic | 25.0% |
| ! | TATAATACTATGATTCCTCT+TGG | + | chr8.4:59203189-59203208 | MS.gene60124:intron | 25.0% |
| ! | TGACACTATCAACATTTAAA+GGG | + | chr8.4:59203334-59203353 | MS.gene60124:intron | 25.0% |
| ! | TTGACACTATCAACATTTAA+AGG | + | chr8.4:59203333-59203352 | MS.gene60124:intron | 25.0% |
| ! | TTTGCAATCAAATATGTCAT+TGG | - | chr8.4:59203257-59203276 | None:intergenic | 25.0% |
| !! | TCTTTTCTTCTTCTATTACA+AGG | - | chr8.4:59203084-59203103 | None:intergenic | 25.0% |
| AACACTGATCTTGAAAACAA+GGG | + | chr8.4:59202908-59202927 | MS.gene60124:CDS | 30.0% | |
| ACTATATCTCCGAATTTAGA+AGG | - | chr8.4:59203590-59203609 | None:intergenic | 30.0% | |
| AGAAAAACTTCATACCATTC+AGG | + | chr8.4:59202704-59202723 | MS.gene60124:CDS | 30.0% | |
| ATTGCAAAAACGATTGCATA+TGG | + | chr8.4:59203487-59203506 | MS.gene60124:intron | 30.0% | |
| CAATCAATTGCATTCTTCAA+TGG | - | chr8.4:59203766-59203785 | None:intergenic | 30.0% | |
| CATTGAAGAATGCAATTGAT+TGG | + | chr8.4:59203764-59203783 | MS.gene60124:CDS | 30.0% | |
| CTATATCTCCGAATTTAGAA+GGG | - | chr8.4:59203589-59203608 | None:intergenic | 30.0% | |
| ! | AATGGTATGAAGTTTTTCTG+AGG | - | chr8.4:59202703-59202722 | None:intergenic | 30.0% |
| ! | AGGCCATAATTGCAATATTT+TGG | + | chr8.4:59203298-59203317 | MS.gene60124:intron | 30.0% |
| ! | ATGGTATGAAGTTTTTCTGA+GGG | - | chr8.4:59202702-59202721 | None:intergenic | 30.0% |
| ! | CGATTTTTGTTCAAGAAGTT+CGG | + | chr8.4:59203131-59203150 | MS.gene60124:intron | 30.0% |
| ! | GGCCATAATTGCAATATTTT+GGG | + | chr8.4:59203299-59203318 | MS.gene60124:intron | 30.0% |
| ! | GTTGTAGTATTGAATTTGCA+TGG | + | chr8.4:59202795-59202814 | MS.gene60124:intron | 30.0% |
| !! | ATATGCAATCGTTTTTGCAA+TGG | - | chr8.4:59203488-59203507 | None:intergenic | 30.0% |
| !! | TATGCAATCGTTTTTGCAAT+GGG | - | chr8.4:59203487-59203506 | None:intergenic | 30.0% |
| AATGCTCTTAGAAAGAACTC+AGG | - | chr8.4:59203925-59203944 | None:intergenic | 35.0% | |
| ATGGCGATTTGATTGATGAA+GGG | + | chr8.4:59203971-59203990 | MS.gene60124:CDS | 35.0% | |
| CAACACTGATCTTGAAAACA+AGG | + | chr8.4:59202907-59202926 | MS.gene60124:CDS | 35.0% | |
| CACTAAGTCTGTGTTTGATA+AGG | - | chr8.4:59203630-59203649 | None:intergenic | 35.0% | |
| TATCAGCTTGAAGAATCTTG+TGG | - | chr8.4:59202964-59202983 | None:intergenic | 35.0% | |
| TCAAGATCAGTGTTGTACAT+TGG | - | chr8.4:59202902-59202921 | None:intergenic | 35.0% | |
| TGGAGCTAAACACAAAACAA+AGG | - | chr8.4:59203746-59203765 | None:intergenic | 35.0% | |
| TTGAGTAAAGGAGCAATTGA+AGG | + | chr8.4:59202842-59202861 | MS.gene60124:CDS | 35.0% | |
| ! | AAATATGTCATTGGTACCGA+GGG | - | chr8.4:59203248-59203267 | None:intergenic | 35.0% |
| ! | GCAAGTTCTTTTATCTTTGC+AGG | + | chr8.4:59204011-59204030 | MS.gene60124:CDS | 35.0% |
| !! | TTGCAGCTTTGAAATGATCA+CGG | - | chr8.4:59203430-59203449 | None:intergenic | 35.0% |
| AAACATGCGCTAAAGCTATC+AGG | - | chr8.4:59203367-59203386 | None:intergenic | 40.0% | |
| AAACGATTGCATATGGCTCA+CGG | + | chr8.4:59203494-59203513 | MS.gene60124:intron | 40.0% | |
| AACTGCAGCCCTTCTAAATT+CGG | + | chr8.4:59203578-59203597 | MS.gene60124:intron | 40.0% | |
| ACTATGATTCCTCTTGGTCT+TGG | + | chr8.4:59203195-59203214 | MS.gene60124:intron | 40.0% | |
| CAAATATGTCATTGGTACCG+AGG | - | chr8.4:59203249-59203268 | None:intergenic | 40.0% | |
| CCATCATCATTGAACTTTGC+AGG | - | chr8.4:59203955-59203974 | None:intergenic | 40.0% | |
| CCTGCAAAGTTCAATGATGA+TGG | + | chr8.4:59203952-59203971 | MS.gene60124:CDS | 40.0% | |
| CGCATGTTTAGTAATGCGTT+GGG | + | chr8.4:59203378-59203397 | MS.gene60124:intron | 40.0% | |
| GAGTATAACTACTCTGTCAC+AGG | + | chr8.4:59203004-59203023 | MS.gene60124:CDS | 40.0% | |
| GATGGCGATTTGATTGATGA+AGG | + | chr8.4:59203970-59203989 | MS.gene60124:CDS | 40.0% | |
| GCTGCAAATTGTCAAAGTGA+AGG | + | chr8.4:59203443-59203462 | MS.gene60124:intron | 40.0% | |
| GTCAAAGTGAAGGAACGTAA+CGG | + | chr8.4:59203453-59203472 | MS.gene60124:intron | 40.0% | |
| GTCTAGACCACCAAATGTTT+GGG | + | chr8.4:59203789-59203808 | MS.gene60124:CDS | 40.0% | |
| GTGACAGAGTAGTTATACTC+AGG | - | chr8.4:59203004-59203023 | None:intergenic | 40.0% | |
| GTTGCAAAGGTAGGAATCAT+TGG | - | chr8.4:59203163-59203182 | None:intergenic | 40.0% | |
| TCATCATTGAACTTTGCAGG+TGG | - | chr8.4:59203952-59203971 | None:intergenic | 40.0% | |
| TGGCGATTTGATTGATGAAG+GGG | + | chr8.4:59203972-59203991 | MS.gene60124:CDS | 40.0% | |
| TTTGATTGATGAAGGGGCTA+AGG | + | chr8.4:59203978-59203997 | MS.gene60124:CDS | 40.0% | |
| ! | AGTTTTTGCCTTGAAGCCTT+AGG | - | chr8.4:59204044-59204063 | None:intergenic | 40.0% |
| ! | GTTTTTGCCTTGAAGCCTTA+GGG | - | chr8.4:59204043-59204062 | None:intergenic | 40.0% |
| !! | GAAATGATCACGGTGTTGTT+GGG | - | chr8.4:59203420-59203439 | None:intergenic | 40.0% |
| !! | GCAGCAATTGAGTTGAGTAA+AGG | + | chr8.4:59202830-59202849 | MS.gene60124:intron | 40.0% |
| !! | GGATGACTCTAGTTTGTTCT+AGG | + | chr8.4:59203278-59203297 | MS.gene60124:intron | 40.0% |
| !! | TGAAATGATCACGGTGTTGT+TGG | - | chr8.4:59203421-59203440 | None:intergenic | 40.0% |
| AAAGTGAAGGAACGTAACGG+TGG | + | chr8.4:59203456-59203475 | MS.gene60124:intron | 45.0% | |
| ATCAAAGTGGCAGCTCTTTC+TGG | + | chr8.4:59202674-59202693 | MS.gene60124:CDS | 45.0% | |
| ATGCGCTAAAGCTATCAGGT+AGG | - | chr8.4:59203363-59203382 | None:intergenic | 45.0% | |
| CAAAAGAAGACGAACCAGCA+CGG | - | chr8.4:59202736-59202755 | None:intergenic | 45.0% | |
| CACTATCATCTACGCCAAGT+TGG | + | chr8.4:59203868-59203887 | MS.gene60124:CDS | 45.0% | |
| CGAAAAGCTTCAACAAGAGG+TGG | - | chr8.4:59202941-59202960 | None:intergenic | 45.0% | |
| CGTCTAGACCACCAAATGTT+TGG | + | chr8.4:59203788-59203807 | MS.gene60124:CDS | 45.0% | |
| CTTTGCAGGCATTTACCCTA+AGG | + | chr8.4:59204025-59204044 | MS.gene60124:CDS | 45.0% | |
| GCATTTACCCTAAGGCTTCA+AGG | + | chr8.4:59204033-59204052 | MS.gene60124:CDS | 45.0% | |
| GCGCATGTTTAGTAATGCGT+TGG | + | chr8.4:59203377-59203396 | MS.gene60124:intron | 45.0% | |
| TGCGCTAAAGCTATCAGGTA+GGG | - | chr8.4:59203362-59203381 | None:intergenic | 45.0% | |
| TGGCGAAAAGCTTCAACAAG+AGG | - | chr8.4:59202944-59202963 | None:intergenic | 45.0% | |
| !! | ATAAGCACTGGAGGAGACTT+TGG | + | chr8.4:59203832-59203851 | MS.gene60124:CDS | 45.0% |
| !! | TGATTCCTCTTGGTCTTGGT+AGG | + | chr8.4:59203199-59203218 | MS.gene60124:intron | 45.0% |
| AAGACGAACCAGCACGGATA+AGG | - | chr8.4:59202730-59202749 | None:intergenic | 50.0% | |
| ACCGAGGGATGTATCAACGT+GGG | - | chr8.4:59203233-59203252 | None:intergenic | 50.0% | |
| AGACCACCAAATGTTTGGGC+TGG | + | chr8.4:59203793-59203812 | MS.gene60124:CDS | 50.0% | |
| GCAGCTGCAATCATAAGCAC+TGG | + | chr8.4:59203820-59203839 | MS.gene60124:CDS | 50.0% | |
| GCTTTGCCAGCCCAAACATT+TGG | - | chr8.4:59203802-59203821 | None:intergenic | 50.0% | |
| TACCGAGGGATGTATCAACG+TGG | - | chr8.4:59203234-59203253 | None:intergenic | 50.0% | |
| TTGCCAGCCCAAACATTTGG+TGG | - | chr8.4:59203799-59203818 | None:intergenic | 50.0% | |
| !! | GCTGCAATCATAAGCACTGG+AGG | + | chr8.4:59203823-59203842 | MS.gene60124:CDS | 50.0% |
| AGGGATGTATCAACGTGGGG+AGG | - | chr8.4:59203229-59203248 | None:intergenic | 55.0% | |
| CAGCACGGATAAGGCCTGAA+TGG | - | chr8.4:59202721-59202740 | None:intergenic | 55.0% | |
| CCCCACGTTGATACATCCCT+CGG | + | chr8.4:59203229-59203248 | MS.gene60124:intron | 55.0% | |
| CCGAGGGATGTATCAACGTG+GGG | - | chr8.4:59203232-59203251 | None:intergenic | 55.0% | |
| GGCAGCAGCAGTGATCAAAG+TGG | + | chr8.4:59202661-59202680 | MS.gene60124:CDS | 55.0% | |
| GGGATGTATCAACGTGGGGA+GGG | - | chr8.4:59203228-59203247 | None:intergenic | 55.0% | |
| GGTTGCCTACCAAGACCAAG+AGG | - | chr8.4:59203207-59203226 | None:intergenic | 55.0% | |
| ! | AGCACTGGAGGAGACTTTGG+CGG | + | chr8.4:59203835-59203854 | MS.gene60124:CDS | 55.0% |
| ! | CATTCAGGCCTTATCCGTGC+TGG | + | chr8.4:59202719-59202738 | MS.gene60124:CDS | 55.0% |
| ACTGGAGGAGACTTTGGCGG+GGG | + | chr8.4:59203838-59203857 | MS.gene60124:CDS | 60.0% | |
| CACTGGAGGAGACTTTGGCG+GGG | + | chr8.4:59203837-59203856 | MS.gene60124:CDS | 60.0% | |
| GCACTGGAGGAGACTTTGGC+GGG | + | chr8.4:59203836-59203855 | MS.gene60124:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 59202659 | 59204065 | 59202659 | ID=MS.gene60124 |
| chr8.4 | mRNA | 59202659 | 59204065 | 59202659 | ID=MS.gene60124.t1;Parent=MS.gene60124 |
| chr8.4 | exon | 59202659 | 59202740 | 59202659 | ID=MS.gene60124.t1.exon1;Parent=MS.gene60124.t1 |
| chr8.4 | CDS | 59202659 | 59202740 | 59202659 | ID=cds.MS.gene60124.t1;Parent=MS.gene60124.t1 |
| chr8.4 | exon | 59202834 | 59203025 | 59202834 | ID=MS.gene60124.t1.exon2;Parent=MS.gene60124.t1 |
| chr8.4 | CDS | 59202834 | 59203025 | 59202834 | ID=cds.MS.gene60124.t1;Parent=MS.gene60124.t1 |
| chr8.4 | exon | 59203761 | 59204065 | 59203761 | ID=MS.gene60124.t1.exon3;Parent=MS.gene60124.t1 |
| chr8.4 | CDS | 59203761 | 59204065 | 59203761 | ID=cds.MS.gene60124.t1;Parent=MS.gene60124.t1 |
| Gene Sequence |
| Protein sequence |
