Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60374.t1 | AES90851.2 | 89 | 73 | 8 | 0 | 1 | 73 | 281 | 353 | 8.80E-27 | 129 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60374.t1 | Q9FUR2 | 46.3 | 108 | 21 | 2 | 2 | 73 | 5 | 111 | 4.0e-12 | 71.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60374.t1 | G7JHN0 | 89.0 | 73 | 8 | 0 | 1 | 73 | 281 | 353 | 6.3e-27 | 129.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene60374 | 0.810627 | 1.05E-50 | -1.69E-46 |
| MS.gene049166 | MS.gene60374 | 0.820936 | 5.27E-53 | -1.69E-46 |
| MS.gene04917 | MS.gene60374 | 0.808947 | 2.41E-50 | -1.69E-46 |
| MS.gene049801 | MS.gene60374 | 0.813804 | 2.13E-51 | -1.69E-46 |
| MS.gene049822 | MS.gene60374 | 0.803038 | 4.22E-49 | -1.69E-46 |
| MS.gene04984 | MS.gene60374 | 0.821891 | 3.17E-53 | -1.69E-46 |
| MS.gene04991 | MS.gene60374 | -0.823223 | 1.55E-53 | -1.69E-46 |
| MS.gene050084 | MS.gene60374 | 0.800332 | 1.51E-48 | -1.69E-46 |
| MS.gene050085 | MS.gene60374 | 0.8146 | 1.42E-51 | -1.69E-46 |
| MS.gene050114 | MS.gene60374 | 0.857202 | 1.92E-62 | -1.69E-46 |
| MS.gene050317 | MS.gene60374 | 0.845514 | 3.87E-59 | -1.69E-46 |
| MS.gene050654 | MS.gene60374 | 0.834904 | 2.29E-56 | -1.69E-46 |
| MS.gene050941 | MS.gene60374 | 0.817927 | 2.56E-52 | -1.69E-46 |
| MS.gene051184 | MS.gene60374 | 0.822123 | 2.80E-53 | -1.69E-46 |
| MS.gene051245 | MS.gene60374 | 0.806499 | 7.98E-50 | -1.69E-46 |
| MS.gene051452 | MS.gene60374 | 0.815011 | 1.15E-51 | -1.69E-46 |
| MS.gene051655 | MS.gene60374 | 0.82206 | 2.90E-53 | -1.69E-46 |
| MS.gene051831 | MS.gene60374 | 0.822983 | 1.77E-53 | -1.69E-46 |
| MS.gene052434 | MS.gene60374 | 0.856212 | 3.75E-62 | -1.69E-46 |
| MS.gene053058 | MS.gene60374 | 0.814589 | 1.43E-51 | -1.69E-46 |
| MS.gene053381 | MS.gene60374 | 0.814114 | 1.82E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene60374 | -0.810491 | 1.12E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene60374 | 0.809075 | 2.26E-50 | -1.69E-46 |
| MS.gene054823 | MS.gene60374 | 0.814537 | 1.46E-51 | -1.69E-46 |
| MS.gene055311 | MS.gene60374 | 0.821119 | 4.78E-53 | -1.69E-46 |
| MS.gene055441 | MS.gene60374 | 0.801797 | 7.60E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene60374 | 0.80114 | 1.04E-48 | -1.69E-46 |
| MS.gene056097 | MS.gene60374 | 0.805278 | 1.44E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene60374 | 0.829643 | 4.59E-55 | -1.69E-46 |
| MS.gene056787 | MS.gene60374 | 0.857727 | 1.34E-62 | -1.69E-46 |
| MS.gene056849 | MS.gene60374 | 0.872963 | 2.12E-67 | -1.69E-46 |
| MS.gene057055 | MS.gene60374 | 0.801035 | 1.09E-48 | -1.69E-46 |
| MS.gene057999 | MS.gene60374 | 0.80538 | 1.37E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene60374 | 0.801165 | 1.02E-48 | -1.69E-46 |
| MS.gene058278 | MS.gene60374 | 0.812048 | 5.16E-51 | -1.69E-46 |
| MS.gene058646 | MS.gene60374 | 0.81933 | 1.23E-52 | -1.69E-46 |
| MS.gene058654 | MS.gene60374 | 0.837332 | 5.53E-57 | -1.69E-46 |
| MS.gene058758 | MS.gene60374 | 0.811203 | 7.87E-51 | -1.69E-46 |
| MS.gene059050 | MS.gene60374 | 0.823873 | 1.10E-53 | -1.69E-46 |
| MS.gene059360 | MS.gene60374 | 0.824609 | 7.36E-54 | -1.69E-46 |
| MS.gene060084 | MS.gene60374 | 0.83722 | 5.91E-57 | -1.69E-46 |
| MS.gene06010 | MS.gene60374 | 0.854988 | 8.53E-62 | -1.69E-46 |
| MS.gene060296 | MS.gene60374 | 0.839688 | 1.36E-57 | -1.69E-46 |
| MS.gene060297 | MS.gene60374 | 0.819858 | 9.31E-53 | -1.69E-46 |
| MS.gene060852 | MS.gene60374 | 0.800521 | 1.39E-48 | -1.69E-46 |
| MS.gene060869 | MS.gene60374 | 0.844662 | 6.58E-59 | -1.69E-46 |
| MS.gene060870 | MS.gene60374 | 0.853604 | 2.14E-61 | -1.69E-46 |
| MS.gene06121 | MS.gene60374 | 0.806651 | 7.42E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60374.t1 | MTR_4g098850 | 94.521 | 73 | 4 | 0 | 1 | 73 | 281 | 353 | 1.44e-42 | 146 |
| MS.gene60374.t1 | MTR_5g014090 | 53.398 | 103 | 16 | 2 | 2 | 73 | 5 | 106 | 6.97e-23 | 90.1 |
| MS.gene60374.t1 | MTR_5g014090 | 53.398 | 103 | 16 | 2 | 2 | 73 | 5 | 106 | 8.97e-23 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60374.t1 | AT4G18010 | 46.296 | 108 | 21 | 2 | 2 | 73 | 5 | 111 | 1.35e-19 | 80.9 |
| MS.gene60374.t1 | AT4G18010 | 46.296 | 108 | 21 | 2 | 2 | 73 | 5 | 111 | 1.36e-19 | 80.9 |
Find 10 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCATTAATGCAGGTGTTT+TGG | 0.294116 | 8.1:+23796112 | MS.gene60374:intron |
| ATGGTTGAATATAAAGCAAA+AGG | 0.473863 | 8.1:+23796155 | MS.gene60374:CDS |
| AGCATCATACCTCACTTCCT+TGG | 0.478675 | 8.1:-23797933 | None:intergenic |
| CATCCACAGTGATGAAGAAA+TGG | 0.502176 | 8.1:+23796136 | MS.gene60374:CDS |
| ACATAAATACCAAGGAAGTG+AGG | 0.640425 | 8.1:+23797924 | MS.gene60374:CDS |
| ACTGATGAGAGTGAAGATGA+TGG | 0.645910 | 8.1:+23796213 | MS.gene60374:CDS |
| AGCACAATGAAAACAATGAG+GGG | 0.654951 | 8.1:+23795996 | None:intergenic |
| TGCTCAATACATAAATACCA+AGG | 0.661086 | 8.1:+23797916 | MS.gene60374:CDS |
| CAACCATTTCTTCATCACTG+TGG | 0.674705 | 8.1:-23796139 | None:intergenic |
| AATGAGGGGAAAACGCTCAG+AGG | 0.681871 | 8.1:+23796010 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATATGAACAACTAAA+AGG | - | chr8.1:23796278-23796297 | None:intergenic | 15.0% |
| !! | AAATTGTTAGTATTATATTG+AGG | + | chr8.1:23796450-23796469 | MS.gene60374:intron | 15.0% |
| !! | AATTGTTAGTATTATATTGA+GGG | + | chr8.1:23796451-23796470 | MS.gene60374:intron | 15.0% |
| !! | ATTAATGAAACCAAATTATA+AGG | - | chr8.1:23796102-23796121 | None:intergenic | 15.0% |
| !! | ATTAATTTCATATACTTTCT+CGG | - | chr8.1:23797745-23797764 | None:intergenic | 15.0% |
| !! | CTTATTTATTCATCTTAAAA+AGG | + | chr8.1:23796776-23796795 | MS.gene60374:intron | 15.0% |
| !!! | CTTTTTAAGATGAATAAATA+AGG | - | chr8.1:23796778-23796797 | None:intergenic | 15.0% |
| !!! | TATTTTGGATGTTTTTTAAT+TGG | + | chr8.1:23797189-23797208 | MS.gene60374:intron | 15.0% |
| !! | AATTTCTATTCTATTCTATG+AGG | + | chr8.1:23796054-23796073 | MS.gene60374:intron | 20.0% |
| !! | ATTACATAAATATGTGTATG+CGG | - | chr8.1:23797047-23797066 | None:intergenic | 20.0% |
| !! | TCAAATTATCCTTATTAGAA+TGG | + | chr8.1:23797557-23797576 | MS.gene60374:intron | 20.0% |
| !! | TTTGTTGAAACCTTATAATT+TGG | + | chr8.1:23796089-23796108 | MS.gene60374:intron | 20.0% |
| !!! | ATTAAGCAGTTTTTAGATTT+AGG | - | chr8.1:23797131-23797150 | None:intergenic | 20.0% |
| !!! | GGGTATTTTTTTATAAACAT+GGG | + | chr8.1:23797381-23797400 | MS.gene60374:intron | 20.0% |
| !!! | TCTTTTCATAGTTAAAATGT+GGG | + | chr8.1:23797302-23797321 | MS.gene60374:intron | 20.0% |
| !!! | TGGGTATTTTTTTATAAACA+TGG | + | chr8.1:23797380-23797399 | MS.gene60374:intron | 20.0% |
| !!! | TTTTTTATAAACATGGGTAT+GGG | + | chr8.1:23797387-23797406 | MS.gene60374:intron | 20.0% |
| !!! | TTTTTTTATAAACATGGGTA+TGG | + | chr8.1:23797386-23797405 | MS.gene60374:intron | 20.0% |
| ! | AATTACCCACAAATTTAAGT+GGG | + | chr8.1:23796979-23796998 | MS.gene60374:intron | 25.0% |
| ! | AATTATCCTTATTAGAATGG+TGG | + | chr8.1:23797560-23797579 | MS.gene60374:intron | 25.0% |
| ! | ATAGTTAAAATGTGGGTAAT+GGG | + | chr8.1:23797309-23797328 | MS.gene60374:intron | 25.0% |
| ! | ATATGAACAACTAAAAGGAA+AGG | - | chr8.1:23796273-23796292 | None:intergenic | 25.0% |
| ! | ATGATCAAATAGACATTCTA+AGG | - | chr8.1:23797456-23797475 | None:intergenic | 25.0% |
| ! | ATGGTTGAATATAAAGCAAA+AGG | + | chr8.1:23796155-23796174 | MS.gene60374:CDS | 25.0% |
| ! | ATTGATGAGATATGAATAGA+AGG | + | chr8.1:23796329-23796348 | MS.gene60374:intron | 25.0% |
| ! | TAATTACCCACAAATTTAAG+TGG | + | chr8.1:23796978-23796997 | MS.gene60374:intron | 25.0% |
| ! | TCATAAAATAGTAAGAATCG+TGG | - | chr8.1:23797222-23797241 | None:intergenic | 25.0% |
| ! | TTACATAAATATGTGTATGC+GGG | - | chr8.1:23797046-23797065 | None:intergenic | 25.0% |
| !! | GTCTTTTCATAGTTAAAATG+TGG | + | chr8.1:23797301-23797320 | MS.gene60374:intron | 25.0% |
| !! | TAATTTGGTTTCATTAATGC+AGG | + | chr8.1:23796104-23796123 | MS.gene60374:intron | 25.0% |
| !!! | ACAGTTTTTTAGGGATATTT+TGG | + | chr8.1:23797174-23797193 | MS.gene60374:intron | 25.0% |
| !!! | ATTGAAAGTGACTTGTTTTT+TGG | - | chr8.1:23796831-23796850 | None:intergenic | 25.0% |
| AAAAAATATCCTCATTGGGT+AGG | + | chr8.1:23796928-23796947 | MS.gene60374:intron | 30.0% | |
| AAAAAGCCACCATTCTAATA+AGG | - | chr8.1:23797569-23797588 | None:intergenic | 30.0% | |
| AAAAATATCCTCATTGGGTA+GGG | + | chr8.1:23796929-23796948 | MS.gene60374:intron | 30.0% | |
| AGACAATGCATAATATATGC+GGG | + | chr8.1:23796728-23796747 | MS.gene60374:intron | 30.0% | |
| AGATGAATAAATAAGGTGTG+TGG | - | chr8.1:23796771-23796790 | None:intergenic | 30.0% | |
| ATATGAATAGAAGGAAAGAG+AGG | + | chr8.1:23796338-23796357 | MS.gene60374:intron | 30.0% | |
| ATGAATAAATAAGGTGTGTG+GGG | - | chr8.1:23796769-23796788 | None:intergenic | 30.0% | |
| CATAGTTAAAATGTGGGTAA+TGG | + | chr8.1:23797308-23797327 | MS.gene60374:intron | 30.0% | |
| CATGACATGAAAGCTTATAA+AGG | - | chr8.1:23796536-23796555 | None:intergenic | 30.0% | |
| CCGTAAAAAATATCCTCATT+GGG | + | chr8.1:23796924-23796943 | MS.gene60374:intron | 30.0% | |
| GAGACAATGCATAATATATG+CGG | + | chr8.1:23796727-23796746 | MS.gene60374:intron | 30.0% | |
| GATGAATAAATAAGGTGTGT+GGG | - | chr8.1:23796770-23796789 | None:intergenic | 30.0% | |
| TAAATTTGTGGGTAATTACC+CGG | - | chr8.1:23796976-23796995 | None:intergenic | 30.0% | |
| TAGTCTTCCAAAATTGACAT+GGG | + | chr8.1:23797660-23797679 | MS.gene60374:intron | 30.0% | |
| TGCTCAATACATAAATACCA+AGG | + | chr8.1:23797916-23797935 | MS.gene60374:CDS | 30.0% | |
| ! | AACATCTCATTTCTTTTCCA+AGG | - | chr8.1:23797609-23797628 | None:intergenic | 30.0% |
| ! | AAGAGGGAGTATAAAATAGT+TGG | - | chr8.1:23796642-23796661 | None:intergenic | 30.0% |
| ! | AGAGGGAGTATAAAATAGTT+GGG | - | chr8.1:23796641-23796660 | None:intergenic | 30.0% |
| ! | TCAAATAGACATTCTAAGGA+TGG | - | chr8.1:23797452-23797471 | None:intergenic | 30.0% |
| ! | TTAGTCTTCCAAAATTGACA+TGG | + | chr8.1:23797659-23797678 | MS.gene60374:intron | 30.0% |
| ! | TTTCATTAATGCAGGTGTTT+TGG | + | chr8.1:23796112-23796131 | MS.gene60374:intron | 30.0% |
| !!! | ACAATTGCTTTTTTCTGTTC+TGG | - | chr8.1:23796411-23796430 | None:intergenic | 30.0% |
| !!! | CCAATGAGGATATTTTTTAC+GGG | - | chr8.1:23796926-23796945 | None:intergenic | 30.0% |
| !!! | CCCAATGAGGATATTTTTTA+CGG | - | chr8.1:23796927-23796946 | None:intergenic | 30.0% |
| AATTTACAAGTGTGACGAAG+AGG | - | chr8.1:23796659-23796678 | None:intergenic | 35.0% | |
| ACAACTAGAGAGCAATATGA+TGG | - | chr8.1:23796302-23796321 | None:intergenic | 35.0% | |
| ATCCCTAAAAAACTGTACAC+AGG | - | chr8.1:23797170-23797189 | None:intergenic | 35.0% | |
| ATGAAGCTGAAATTGTTCCT+TGG | + | chr8.1:23797589-23797608 | MS.gene60374:intron | 35.0% | |
| ATTTACAAGTGTGACGAAGA+GGG | - | chr8.1:23796658-23796677 | None:intergenic | 35.0% | |
| CCATACCCACTTAAATTTGT+GGG | - | chr8.1:23796987-23797006 | None:intergenic | 35.0% | |
| CCCGTAAAAAATATCCTCAT+TGG | + | chr8.1:23796923-23796942 | MS.gene60374:intron | 35.0% | |
| CTAAAAAACTGTACACAGGA+GGG | - | chr8.1:23797166-23797185 | None:intergenic | 35.0% | |
| GACAATGCATAATATATGCG+GGG | + | chr8.1:23796729-23796748 | MS.gene60374:intron | 35.0% | |
| GAGTATGACACTAAAGTTGT+TGG | + | chr8.1:23797335-23797354 | MS.gene60374:intron | 35.0% | |
| GATTAACTGTTATCGTGATG+AGG | + | chr8.1:23797788-23797807 | MS.gene60374:intron | 35.0% | |
| TATAAAATAGTTGGGAGGAG+TGG | - | chr8.1:23796633-23796652 | None:intergenic | 35.0% | |
| TCATATTGCTCTCTAGTTGT+TGG | + | chr8.1:23796302-23796321 | MS.gene60374:intron | 35.0% | |
| TCCATACCCACTTAAATTTG+TGG | - | chr8.1:23796988-23797007 | None:intergenic | 35.0% | |
| TTATAAACATGGGTATGGGA+AGG | + | chr8.1:23797391-23797410 | MS.gene60374:intron | 35.0% | |
| ! | CTTAAAACGAGTGTCGTATA+GGG | + | chr8.1:23796871-23796890 | MS.gene60374:intron | 35.0% |
| ! | TCTTAAAACGAGTGTCGTAT+AGG | + | chr8.1:23796870-23796889 | MS.gene60374:intron | 35.0% |
| ! | TTTGGAGTCTAGTAAACTAG+TGG | - | chr8.1:23796813-23796832 | None:intergenic | 35.0% |
| !! | TTCAAAGCATTGACATAGTC+TGG | - | chr8.1:23796602-23796621 | None:intergenic | 35.0% |
| !!! | ATACGACACTCGTTTTAAGA+CGG | - | chr8.1:23796870-23796889 | None:intergenic | 35.0% |
| !!! | CTCCTGTGTACAGTTTTTTA+GGG | + | chr8.1:23797165-23797184 | MS.gene60374:intron | 35.0% |
| !!! | TATTTTTTACGGGTGTCCAT+CGG | - | chr8.1:23796916-23796935 | None:intergenic | 35.0% |
| ACTGATGAGAGTGAAGATGA+TGG | + | chr8.1:23796213-23796232 | MS.gene60374:CDS | 40.0% | |
| ATAATATATGCGGGGAGTCA+GGG | + | chr8.1:23796737-23796756 | MS.gene60374:intron | 40.0% | |
| CAACCATTTCTTCATCACTG+TGG | - | chr8.1:23796142-23796161 | None:intergenic | 40.0% | |
| CACTATAGTACCTTACCGAT+AGG | + | chr8.1:23797416-23797435 | MS.gene60374:intron | 40.0% | |
| CATCCACAGTGATGAAGAAA+TGG | + | chr8.1:23796136-23796155 | MS.gene60374:CDS | 40.0% | |
| CCCACAAATTTAAGTGGGTA+TGG | + | chr8.1:23796984-23797003 | MS.gene60374:intron | 40.0% | |
| CCTAAAAAACTGTACACAGG+AGG | - | chr8.1:23797167-23797186 | None:intergenic | 40.0% | |
| CCTTCTCTGTAAACTAAACC+AGG | - | chr8.1:23796490-23796509 | None:intergenic | 40.0% | |
| GTCGTATAGGGATGGTAATT+GGG | + | chr8.1:23796883-23796902 | MS.gene60374:intron | 40.0% | |
| TGTCGTATAGGGATGGTAAT+TGG | + | chr8.1:23796882-23796901 | MS.gene60374:intron | 40.0% | |
| ! | AAATATGTGTATGCGGGTTG+CGG | - | chr8.1:23797040-23797059 | None:intergenic | 40.0% |
| ! | AGACATTCTAAGGATGGCAA+TGG | - | chr8.1:23797446-23797465 | None:intergenic | 40.0% |
| ! | CCTGGTTTAGTTTACAGAGA+AGG | + | chr8.1:23796487-23796506 | MS.gene60374:intron | 40.0% |
| ! | CGTTTCACCCATGTCAATTT+TGG | - | chr8.1:23797670-23797689 | None:intergenic | 40.0% |
| ! | GACATTCTAAGGATGGCAAT+GGG | - | chr8.1:23797445-23797464 | None:intergenic | 40.0% |
| ! | GGGAGTATAAAATAGTTGGG+AGG | - | chr8.1:23796638-23796657 | None:intergenic | 40.0% |
| !! | TGGTTTGGTGGTGTTAGTTT+AGG | - | chr8.1:23797709-23797728 | None:intergenic | 40.0% |
| !!! | CCTCCTGTGTACAGTTTTTT+AGG | + | chr8.1:23797164-23797183 | MS.gene60374:intron | 40.0% |
| AAACCCTGCTTTCATGGATC+CGG | + | chr8.1:23796954-23796973 | MS.gene60374:intron | 45.0% | |
| AAACTGTACACAGGAGGGAA+CGG | - | chr8.1:23797161-23797180 | None:intergenic | 45.0% | |
| AGGGTAAAACCCTGCTTTCA+TGG | + | chr8.1:23796948-23796967 | MS.gene60374:intron | 45.0% | |
| CAATGGGTATCCTATCGGTA+AGG | - | chr8.1:23797429-23797448 | None:intergenic | 45.0% | |
| CATAATATATGCGGGGAGTC+AGG | + | chr8.1:23796736-23796755 | MS.gene60374:intron | 45.0% | |
| GAGGGTGATTCTAATTGTCC+TGG | + | chr8.1:23796469-23796488 | MS.gene60374:intron | 45.0% | |
| GATGGCAATGGGTATCCTAT+CGG | - | chr8.1:23797434-23797453 | None:intergenic | 45.0% | |
| ! | AAACGAGTGTCGTATAGGGA+TGG | + | chr8.1:23796875-23796894 | MS.gene60374:intron | 45.0% |
| AACCCTGCTTTCATGGATCC+GGG | + | chr8.1:23796955-23796974 | MS.gene60374:intron | 50.0% | |
| CACTAAAGTTGTTGGCCACG+AGG | + | chr8.1:23797343-23797362 | MS.gene60374:intron | 50.0% | |
| GTGAAACGAAACACGCTGCA+AGG | + | chr8.1:23797682-23797701 | MS.gene60374:intron | 50.0% | |
| TACCCGGATCCATGAAAGCA+GGG | - | chr8.1:23796960-23796979 | None:intergenic | 50.0% | |
| TTACCCGGATCCATGAAAGC+AGG | - | chr8.1:23796961-23796980 | None:intergenic | 50.0% | |
| ! | GGGTTTTACCCTACCCAATG+AGG | - | chr8.1:23796940-23796959 | None:intergenic | 50.0% |
| ! | GGTTAGTCGCACGTTTGGTT+TGG | - | chr8.1:23797724-23797743 | None:intergenic | 50.0% |
| ! | TTCTCGGTTAGTCGCACGTT+TGG | - | chr8.1:23797729-23797748 | None:intergenic | 50.0% |
| !! | TAGTCGCACGTTTGGTTTGG+TGG | - | chr8.1:23797721-23797740 | None:intergenic | 50.0% |
| !!! | CGACACTCGTTTTAAGACGG+AGG | - | chr8.1:23796867-23796886 | None:intergenic | 50.0% |
| ACGAGGATACGCGTTGGGTA+TGG | + | chr8.1:23797360-23797379 | MS.gene60374:intron | 55.0% | |
| AGTGGGTATGGACGCGAGTA+AGG | + | chr8.1:23796996-23797015 | MS.gene60374:intron | 55.0% | |
| ATACCCAACGCGTATCCTCG+TGG | - | chr8.1:23797361-23797380 | None:intergenic | 55.0% | |
| CGAGGATACGCGTTGGGTAT+GGG | + | chr8.1:23797361-23797380 | MS.gene60374:intron | 55.0% | |
| GTAATTGGGCCCAAGTCCGA+TGG | + | chr8.1:23796897-23796916 | MS.gene60374:intron | 55.0% | |
| GTGGGTATGGACGCGAGTAA+GGG | + | chr8.1:23796997-23797016 | MS.gene60374:intron | 55.0% | |
| TACGGGTGTCCATCGGACTT+GGG | - | chr8.1:23796909-23796928 | None:intergenic | 55.0% | |
| TTACGGGTGTCCATCGGACT+TGG | - | chr8.1:23796910-23796929 | None:intergenic | 55.0% | |
| TGGCCACGAGGATACGCGTT+GGG | + | chr8.1:23797355-23797374 | MS.gene60374:intron | 60.0% | |
| TTGGCCACGAGGATACGCGT+TGG | + | chr8.1:23797354-23797373 | MS.gene60374:intron | 60.0% | |
| ! | TGTATGCGGGTTGCGGAGCT+GGG | - | chr8.1:23797033-23797052 | None:intergenic | 60.0% |
| ! | GTGTATGCGGGTTGCGGAGC+TGG | - | chr8.1:23797034-23797053 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 23796011 | 23797945 | 23796011 | ID=MS.gene60374 |
| chr8.1 | mRNA | 23796011 | 23797945 | 23796011 | ID=MS.gene60374.t1;Parent=MS.gene60374 |
| chr8.1 | exon | 23796011 | 23796031 | 23796011 | ID=MS.gene60374.t1.exon1;Parent=MS.gene60374.t1 |
| chr8.1 | CDS | 23796011 | 23796031 | 23796011 | ID=cds.MS.gene60374.t1;Parent=MS.gene60374.t1 |
| chr8.1 | exon | 23796126 | 23796234 | 23796126 | ID=MS.gene60374.t1.exon2;Parent=MS.gene60374.t1 |
| chr8.1 | CDS | 23796126 | 23796234 | 23796126 | ID=cds.MS.gene60374.t1;Parent=MS.gene60374.t1 |
| chr8.1 | exon | 23797855 | 23797945 | 23797855 | ID=MS.gene60374.t1.exon3;Parent=MS.gene60374.t1 |
| chr8.1 | CDS | 23797855 | 23797945 | 23797855 | ID=cds.MS.gene60374.t1;Parent=MS.gene60374.t1 |
| Gene Sequence |
| Protein sequence |
