Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61579.t1 | XP_003605942.1 | 99.2 | 239 | 2 | 0 | 1 | 239 | 1 | 239 | 1.00E-124 | 456.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61579.t1 | Q9ATM2 | 47.9 | 236 | 121 | 2 | 4 | 239 | 7 | 240 | 1.6e-57 | 224.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61579.t1 | G7JDK7 | 99.2 | 239 | 2 | 0 | 1 | 239 | 1 | 239 | 7.4e-125 | 456.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050670 | MS.gene61579 | 0.844723 | 6.34E-59 | -1.69E-46 |
| MS.gene05105 | MS.gene61579 | 0.823545 | 1.31E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene61579 | 0.815628 | 8.38E-52 | -1.69E-46 |
| MS.gene051582 | MS.gene61579 | 0.843721 | 1.18E-58 | -1.69E-46 |
| MS.gene051588 | MS.gene61579 | 0.803513 | 3.36E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene61579 | -0.833942 | 3.99E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene61579 | 0.850544 | 1.59E-60 | -1.69E-46 |
| MS.gene052481 | MS.gene61579 | 0.813294 | 2.75E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene61579 | 0.803908 | 2.78E-49 | -1.69E-46 |
| MS.gene052501 | MS.gene61579 | 0.811877 | 5.62E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene61579 | 0.819118 | 1.37E-52 | -1.69E-46 |
| MS.gene052767 | MS.gene61579 | 0.805397 | 1.36E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene61579 | 0.805878 | 1.08E-49 | -1.69E-46 |
| MS.gene053873 | MS.gene61579 | 0.804245 | 2.37E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene61579 | 0.813195 | 2.89E-51 | -1.69E-46 |
| MS.gene054719 | MS.gene61579 | 0.801433 | 9.03E-49 | -1.69E-46 |
| MS.gene054917 | MS.gene61579 | 0.808971 | 2.38E-50 | -1.69E-46 |
| MS.gene054918 | MS.gene61579 | 0.860508 | 1.97E-63 | -1.69E-46 |
| MS.gene054920 | MS.gene61579 | 0.83404 | 3.77E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene61579 | 0.84135 | 5.01E-58 | -1.69E-46 |
| MS.gene055370 | MS.gene61579 | 0.802407 | 5.69E-49 | -1.69E-46 |
| MS.gene055428 | MS.gene61579 | 0.802608 | 5.18E-49 | -1.69E-46 |
| MS.gene056337 | MS.gene61579 | 0.834939 | 2.24E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene61579 | 0.818789 | 1.63E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene61579 | 0.803627 | 3.19E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene61579 | 0.814673 | 1.37E-51 | -1.69E-46 |
| MS.gene057146 | MS.gene61579 | 0.810365 | 1.19E-50 | -1.69E-46 |
| MS.gene057310 | MS.gene61579 | 0.829286 | 5.61E-55 | -1.69E-46 |
| MS.gene057476 | MS.gene61579 | 0.819459 | 1.15E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene61579 | 0.807498 | 4.91E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene61579 | 0.81033 | 1.22E-50 | -1.69E-46 |
| MS.gene058233 | MS.gene61579 | 0.812676 | 3.76E-51 | -1.69E-46 |
| MS.gene058376 | MS.gene61579 | 0.817445 | 3.28E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene61579 | 0.8007 | 1.27E-48 | -1.69E-46 |
| MS.gene058710 | MS.gene61579 | 0.822434 | 2.37E-53 | -1.69E-46 |
| MS.gene059141 | MS.gene61579 | 0.814369 | 1.60E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene61579 | 0.835853 | 1.32E-56 | -1.69E-46 |
| MS.gene059462 | MS.gene61579 | 0.800347 | 1.50E-48 | -1.69E-46 |
| MS.gene059688 | MS.gene61579 | 0.832959 | 7.02E-56 | -1.69E-46 |
| MS.gene059692 | MS.gene61579 | 0.803392 | 3.56E-49 | -1.69E-46 |
| MS.gene059695 | MS.gene61579 | 0.81031 | 1.23E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene61579 | 0.840266 | 9.64E-58 | -1.69E-46 |
| MS.gene061049 | MS.gene61579 | 0.813078 | 3.07E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61579.t1 | MTR_4g049340 | 99.163 | 239 | 2 | 0 | 1 | 239 | 1 | 239 | 8.43e-172 | 473 |
| MS.gene61579.t1 | MTR_7g085070 | 52.245 | 245 | 110 | 3 | 1 | 239 | 3 | 246 | 1.86e-79 | 239 |
| MS.gene61579.t1 | MTR_6g033010 | 51.489 | 235 | 108 | 2 | 4 | 233 | 5 | 238 | 9.89e-74 | 224 |
| MS.gene61579.t1 | MTR_6g033010 | 51.020 | 196 | 90 | 2 | 4 | 194 | 5 | 199 | 6.11e-53 | 170 |
| MS.gene61579.t1 | MTR_6g033010 | 51.309 | 191 | 87 | 2 | 4 | 189 | 5 | 194 | 5.39e-52 | 168 |
| MS.gene61579.t1 | MTR_7g088310 | 34.694 | 196 | 110 | 6 | 49 | 239 | 50 | 232 | 1.85e-25 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61579.t1 | AT3G04090 | 46.522 | 230 | 119 | 2 | 1 | 230 | 2 | 227 | 5.30e-61 | 192 |
| MS.gene61579.t1 | AT5G18290 | 43.033 | 244 | 133 | 3 | 1 | 239 | 1 | 243 | 2.48e-55 | 177 |
| MS.gene61579.t1 | AT5G18290 | 43.033 | 244 | 133 | 3 | 1 | 239 | 1 | 243 | 2.48e-55 | 177 |
| MS.gene61579.t1 | AT3G56950 | 29.461 | 241 | 156 | 5 | 1 | 238 | 1 | 230 | 9.76e-25 | 98.6 |
| MS.gene61579.t1 | AT3G56950 | 29.461 | 241 | 156 | 5 | 1 | 238 | 1 | 230 | 1.44e-24 | 98.6 |
Find 58 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCTCACAATAAGCCTTAT+TGG | 0.201441 | 4.1:+48378119 | MS.gene61579:CDS |
| TATTCTTCTTGTTATGCTTA+AGG | 0.242398 | 4.1:+48378400 | MS.gene61579:CDS |
| TTCTGTGGCAACTTTGGTTT+TGG | 0.253700 | 4.1:+48378457 | MS.gene61579:CDS |
| ATTCTTCTTGTTATGCTTAA+GGG | 0.255110 | 4.1:+48378401 | MS.gene61579:CDS |
| CACCTAAGATTCTTCCAATA+AGG | 0.292588 | 4.1:-48378133 | None:intergenic |
| ATTATTGGTTCTGGTTATAC+TGG | 0.295871 | 4.1:+48378482 | MS.gene61579:CDS |
| CCCTGCTAATGCATTTGGTT+GGG | 0.316346 | 4.1:+48378517 | MS.gene61579:CDS |
| TCTATTTATGTCACCGGTTA+AGG | 0.319094 | 4.1:+48378637 | MS.gene61579:CDS |
| ACAATTTCCTTCTACACATT+AGG | 0.335641 | 4.1:+48378179 | MS.gene61579:CDS |
| ATGAACCCTGCTAATGCATT+TGG | 0.350303 | 4.1:+48378512 | MS.gene61579:CDS |
| AGCCTTATTGGAAGAATCTT+AGG | 0.350741 | 4.1:+48378131 | MS.gene61579:CDS |
| CAAGCTTTCTTCTCCTTAAC+CGG | 0.351841 | 4.1:-48378650 | None:intergenic |
| TGAGGATAATGATTGTGTTT+AGG | 0.376446 | 4.1:-48378103 | None:intergenic |
| TTTGCTTTCTGTGGCAACTT+TGG | 0.391117 | 4.1:+48378451 | MS.gene61579:CDS |
| TTGAAGGTTGATTTGCATAC+AGG | 0.396215 | 4.1:+48378335 | MS.gene61579:CDS |
| TGCTTGAGCAGGAAACCTTA+TGG | 0.401263 | 4.1:-48378234 | None:intergenic |
| GGTGAAGGGTCCTTCTTTGA+AGG | 0.406147 | 4.1:+48378319 | MS.gene61579:CDS |
| TCTTAGTCCTAATGTGTAGA+AGG | 0.412697 | 4.1:-48378186 | None:intergenic |
| CATACAGGTGCTATTGTTGA+AGG | 0.413505 | 4.1:+48378350 | MS.gene61579:CDS |
| ACCATGTCTTTGTATTCTGT+TGG | 0.422876 | 4.1:-48378299 | None:intergenic |
| AATAGGCCAGGTAGTGAAAC+TGG | 0.426892 | 4.1:-48378068 | None:intergenic |
| AGGTTTCCTGCTCAAGCAAT+AGG | 0.431036 | 4.1:+48378239 | MS.gene61579:CDS |
| TGGTGCTAGTTCTGCTGCTA+TGG | 0.435394 | 4.1:+48378604 | MS.gene61579:CDS |
| CAAGCAATAGGTGGAGCAAT+TGG | 0.444422 | 4.1:+48378251 | MS.gene61579:CDS |
| GCCCAACCAAATGCATTAGC+AGG | 0.448752 | 4.1:-48378518 | None:intergenic |
| TGAACAATAAGCACAATACT+TGG | 0.454730 | 4.1:+48378546 | MS.gene61579:CDS |
| TTAGGATGGTTGTGATGAAT+AGG | 0.455656 | 4.1:-48378085 | None:intergenic |
| GCTCCACCTATTGCTTGAGC+AGG | 0.471313 | 4.1:-48378245 | None:intergenic |
| AAAGATAGAAGAGATGAATC+TGG | 0.478574 | 4.1:-48378209 | None:intergenic |
| TCGATTTCTATTTATGTCAC+CGG | 0.478707 | 4.1:+48378631 | MS.gene61579:CDS |
| ATTCTGTTGGTATAACTTGA+AGG | 0.478894 | 4.1:-48378286 | None:intergenic |
| GCATTAGCAGGGTTCATAGA+AGG | 0.483858 | 4.1:-48378506 | None:intergenic |
| TGTTAAAATTGCATCTCCTA+TGG | 0.493006 | 4.1:-48377973 | None:intergenic |
| ACCCTGCTAATGCATTTGGT+TGG | 0.505171 | 4.1:+48378516 | MS.gene61579:CDS |
| TGTTGGTATAACTTGAAGGA+TGG | 0.506984 | 4.1:-48378282 | None:intergenic |
| TGCAAATCAACCTTCAAAGA+AGG | 0.515327 | 4.1:-48378329 | None:intergenic |
| CTTCAACCAGTTTCACTACC+TGG | 0.524632 | 4.1:+48378062 | MS.gene61579:CDS |
| GTGAAACTGGTTGAAGGTTG+AGG | 0.525730 | 4.1:-48378055 | None:intergenic |
| TAGAAGGAAATTGTGGATGA+AGG | 0.526466 | 4.1:-48378170 | None:intergenic |
| GAAGGTTTATTTGCTTTCTG+TGG | 0.527749 | 4.1:+48378442 | MS.gene61579:CDS |
| TACAGGTGCTATTGTTGAAG+GGG | 0.543535 | 4.1:+48378352 | MS.gene61579:CDS |
| AGCAAATAAACCTTCAACCA+AGG | 0.552634 | 4.1:-48378434 | None:intergenic |
| GATAATGATTGTGTTTAGGA+TGG | 0.553340 | 4.1:-48378099 | None:intergenic |
| CAGGTAGTGAAACTGGTTGA+AGG | 0.557780 | 4.1:-48378061 | None:intergenic |
| ATACAGGTGCTATTGTTGAA+GGG | 0.562222 | 4.1:+48378351 | MS.gene61579:CDS |
| ATGGTTGTGATGAATAGGCC+AGG | 0.562488 | 4.1:-48378080 | None:intergenic |
| TTCCAATAAGGCTTATTGTG+AGG | 0.575912 | 4.1:-48378121 | None:intergenic |
| CCCAACCAAATGCATTAGCA+GGG | 0.593803 | 4.1:-48378517 | None:intergenic |
| GCAGAACTAGCACCAATCAA+AGG | 0.594305 | 4.1:-48378596 | None:intergenic |
| GAACAATAAGCACAATACTT+GGG | 0.597103 | 4.1:+48378547 | MS.gene61579:CDS |
| TAATGTGTAGAAGGAAATTG+TGG | 0.598806 | 4.1:-48378177 | None:intergenic |
| AGAAGGAAATTGTGGATGAA+GGG | 0.612204 | 4.1:-48378169 | None:intergenic |
| GGAGTGATTAAATCAGCCAT+AGG | 0.613343 | 4.1:+48377957 | MS.gene61579:CDS |
| AGAATACAAAGACATGGTGA+AGG | 0.621122 | 4.1:+48378304 | MS.gene61579:CDS |
| TTTCCTGCTCAAGCAATAGG+TGG | 0.642045 | 4.1:+48378242 | MS.gene61579:CDS |
| GAATACAAAGACATGGTGAA+GGG | 0.648042 | 4.1:+48378305 | MS.gene61579:CDS |
| CTTATTGGAAGAATCTTAGG+TGG | 0.659314 | 4.1:+48378134 | MS.gene61579:CDS |
| ACCAACAGAATACAAAGACA+TGG | 0.676539 | 4.1:+48378298 | MS.gene61579:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCTTCTTGTTATGCTTAA+GGG | + | chr4.1:48378401-48378420 | MS.gene61579:CDS | 25.0% |
| !! | TATTCTTCTTGTTATGCTTA+AGG | + | chr4.1:48378400-48378419 | MS.gene61579:CDS | 25.0% |
| !!! | ACTTTGGTTTTGGTTATTAT+TGG | + | chr4.1:48378467-48378486 | MS.gene61579:CDS | 25.0% |
| AAAGATAGAAGAGATGAATC+TGG | - | chr4.1:48378212-48378231 | None:intergenic | 30.0% | |
| ACAATTTCCTTCTACACATT+AGG | + | chr4.1:48378179-48378198 | MS.gene61579:CDS | 30.0% | |
| ATTCTGTTGGTATAACTTGA+AGG | - | chr4.1:48378289-48378308 | None:intergenic | 30.0% | |
| GAACAATAAGCACAATACTT+GGG | + | chr4.1:48378547-48378566 | MS.gene61579:CDS | 30.0% | |
| GATAATGATTGTGTTTAGGA+TGG | - | chr4.1:48378102-48378121 | None:intergenic | 30.0% | |
| TAATGTGTAGAAGGAAATTG+TGG | - | chr4.1:48378180-48378199 | None:intergenic | 30.0% | |
| TCGATTTCTATTTATGTCAC+CGG | + | chr4.1:48378631-48378650 | MS.gene61579:CDS | 30.0% | |
| TGAACAATAAGCACAATACT+TGG | + | chr4.1:48378546-48378565 | MS.gene61579:CDS | 30.0% | |
| TGAGGATAATGATTGTGTTT+AGG | - | chr4.1:48378106-48378125 | None:intergenic | 30.0% | |
| TGTTAAAATTGCATCTCCTA+TGG | - | chr4.1:48377976-48377995 | None:intergenic | 30.0% | |
| ! | GGGAGCAATTTTATGTTTTT+TGG | + | chr4.1:48378567-48378586 | MS.gene61579:CDS | 30.0% |
| ! | TTTTGGATATGTCCTTTGAT+TGG | + | chr4.1:48378584-48378603 | MS.gene61579:CDS | 30.0% |
| !! | ATTATTGGTTCTGGTTATAC+TGG | + | chr4.1:48378482-48378501 | MS.gene61579:CDS | 30.0% |
| !!! | GTTTTGGTTATTATTGGTTC+TGG | + | chr4.1:48378473-48378492 | MS.gene61579:CDS | 30.0% |
| ACCAACAGAATACAAAGACA+TGG | + | chr4.1:48378298-48378317 | MS.gene61579:CDS | 35.0% | |
| ACCATGTCTTTGTATTCTGT+TGG | - | chr4.1:48378302-48378321 | None:intergenic | 35.0% | |
| AGAAGGAAATTGTGGATGAA+GGG | - | chr4.1:48378172-48378191 | None:intergenic | 35.0% | |
| AGAATACAAAGACATGGTGA+AGG | + | chr4.1:48378304-48378323 | MS.gene61579:CDS | 35.0% | |
| AGCAAATAAACCTTCAACCA+AGG | - | chr4.1:48378437-48378456 | None:intergenic | 35.0% | |
| CACCTAAGATTCTTCCAATA+AGG | - | chr4.1:48378136-48378155 | None:intergenic | 35.0% | |
| CTTATTGGAAGAATCTTAGG+TGG | + | chr4.1:48378134-48378153 | MS.gene61579:CDS | 35.0% | |
| GAAGGTTTATTTGCTTTCTG+TGG | + | chr4.1:48378442-48378461 | MS.gene61579:CDS | 35.0% | |
| GAATACAAAGACATGGTGAA+GGG | + | chr4.1:48378305-48378324 | MS.gene61579:CDS | 35.0% | |
| TAGAAGGAAATTGTGGATGA+AGG | - | chr4.1:48378173-48378192 | None:intergenic | 35.0% | |
| TCCTAAAAATCCTTGGTTGA+AGG | + | chr4.1:48378424-48378443 | MS.gene61579:CDS | 35.0% | |
| TCTTAGTCCTAATGTGTAGA+AGG | - | chr4.1:48378189-48378208 | None:intergenic | 35.0% | |
| TGCAAATCAACCTTCAAAGA+AGG | - | chr4.1:48378332-48378351 | None:intergenic | 35.0% | |
| TGTTGGTATAACTTGAAGGA+TGG | - | chr4.1:48378285-48378304 | None:intergenic | 35.0% | |
| TTAAGGGTCCTAAAAATCCT+TGG | + | chr4.1:48378417-48378436 | MS.gene61579:CDS | 35.0% | |
| TTAGGATGGTTGTGATGAAT+AGG | - | chr4.1:48378088-48378107 | None:intergenic | 35.0% | |
| TTCCAATAAGGCTTATTGTG+AGG | - | chr4.1:48378124-48378143 | None:intergenic | 35.0% | |
| ! | ACCTTCAACCAAGGATTTTT+AGG | - | chr4.1:48378428-48378447 | None:intergenic | 35.0% |
| ! | ATCCTCACAATAAGCCTTAT+TGG | + | chr4.1:48378119-48378138 | MS.gene61579:CDS | 35.0% |
| ! | CTCTTCTATCTTTTGCCATA+AGG | + | chr4.1:48378219-48378238 | MS.gene61579:CDS | 35.0% |
| ! | TCTATTTATGTCACCGGTTA+AGG | + | chr4.1:48378637-48378656 | MS.gene61579:CDS | 35.0% |
| !! | AGCCTTATTGGAAGAATCTT+AGG | + | chr4.1:48378131-48378150 | MS.gene61579:CDS | 35.0% |
| !! | ATACAGGTGCTATTGTTGAA+GGG | + | chr4.1:48378351-48378370 | MS.gene61579:CDS | 35.0% |
| !! | TTGAAGGTTGATTTGCATAC+AGG | + | chr4.1:48378335-48378354 | MS.gene61579:CDS | 35.0% |
| ATGAACCCTGCTAATGCATT+TGG | + | chr4.1:48378512-48378531 | MS.gene61579:CDS | 40.0% | |
| CAAGCTTTCTTCTCCTTAAC+CGG | - | chr4.1:48378653-48378672 | None:intergenic | 40.0% | |
| GGAGTGATTAAATCAGCCAT+AGG | + | chr4.1:48377957-48377976 | MS.gene61579:CDS | 40.0% | |
| TTTGCTTTCTGTGGCAACTT+TGG | + | chr4.1:48378451-48378470 | MS.gene61579:CDS | 40.0% | |
| !! | CATACAGGTGCTATTGTTGA+AGG | + | chr4.1:48378350-48378369 | MS.gene61579:CDS | 40.0% |
| !! | TACAGGTGCTATTGTTGAAG+GGG | + | chr4.1:48378352-48378371 | MS.gene61579:CDS | 40.0% |
| !! | TTCTGTGGCAACTTTGGTTT+TGG | + | chr4.1:48378457-48378476 | MS.gene61579:CDS | 40.0% |
| AATAGGCCAGGTAGTGAAAC+TGG | - | chr4.1:48378071-48378090 | None:intergenic | 45.0% | |
| ACCCTGCTAATGCATTTGGT+TGG | + | chr4.1:48378516-48378535 | MS.gene61579:CDS | 45.0% | |
| AGGTTTCCTGCTCAAGCAAT+AGG | + | chr4.1:48378239-48378258 | MS.gene61579:CDS | 45.0% | |
| ATGGTTGTGATGAATAGGCC+AGG | - | chr4.1:48378083-48378102 | None:intergenic | 45.0% | |
| CAAGCAATAGGTGGAGCAAT+TGG | + | chr4.1:48378251-48378270 | MS.gene61579:CDS | 45.0% | |
| CAGGTAGTGAAACTGGTTGA+AGG | - | chr4.1:48378064-48378083 | None:intergenic | 45.0% | |
| CCCAACCAAATGCATTAGCA+GGG | - | chr4.1:48378520-48378539 | None:intergenic | 45.0% | |
| CCCTGCTAATGCATTTGGTT+GGG | + | chr4.1:48378517-48378536 | MS.gene61579:CDS | 45.0% | |
| CTTCAACCAGTTTCACTACC+TGG | + | chr4.1:48378062-48378081 | MS.gene61579:CDS | 45.0% | |
| GCAGAACTAGCACCAATCAA+AGG | - | chr4.1:48378599-48378618 | None:intergenic | 45.0% | |
| GCATTAGCAGGGTTCATAGA+AGG | - | chr4.1:48378509-48378528 | None:intergenic | 45.0% | |
| GTGAAACTGGTTGAAGGTTG+AGG | - | chr4.1:48378058-48378077 | None:intergenic | 45.0% | |
| TGCTTGAGCAGGAAACCTTA+TGG | - | chr4.1:48378237-48378256 | None:intergenic | 45.0% | |
| TTTCCTGCTCAAGCAATAGG+TGG | + | chr4.1:48378242-48378261 | MS.gene61579:CDS | 45.0% | |
| GCCCAACCAAATGCATTAGC+AGG | - | chr4.1:48378521-48378540 | None:intergenic | 50.0% | |
| GGTGAAGGGTCCTTCTTTGA+AGG | + | chr4.1:48378319-48378338 | MS.gene61579:CDS | 50.0% | |
| !! | TGGTGCTAGTTCTGCTGCTA+TGG | + | chr4.1:48378604-48378623 | MS.gene61579:CDS | 50.0% |
| GCTCCACCTATTGCTTGAGC+AGG | - | chr4.1:48378248-48378267 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 48377954 | 48378673 | 48377954 | ID=MS.gene61579 |
| chr4.1 | mRNA | 48377954 | 48378673 | 48377954 | ID=MS.gene61579.t1;Parent=MS.gene61579 |
| chr4.1 | exon | 48377954 | 48378673 | 48377954 | ID=MS.gene61579.t1.exon1;Parent=MS.gene61579.t1 |
| chr4.1 | CDS | 48377954 | 48378673 | 48377954 | ID=cds.MS.gene61579.t1;Parent=MS.gene61579.t1 |
| Gene Sequence |
| Protein sequence |
