Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66956.t1 | RHN50825.1 | 98.6 | 293 | 4 | 0 | 1 | 293 | 24 | 316 | 1.60E-175 | 625.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66956.t1 | Q41638 | 89.4 | 293 | 30 | 1 | 1 | 293 | 1 | 292 | 1.9e-161 | 569.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66956.t1 | A0A072U942 | 98.6 | 293 | 4 | 0 | 1 | 293 | 1 | 293 | 1.1e-175 | 625.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene66956 | 0.808501 | 3.00E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene66956 | 0.806436 | 8.23E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene66956 | 0.839887 | 1.21E-57 | -1.69E-46 |
| MS.gene050432 | MS.gene66956 | 0.803267 | 3.78E-49 | -1.69E-46 |
| MS.gene052293 | MS.gene66956 | 0.80376 | 2.99E-49 | -1.69E-46 |
| MS.gene052326 | MS.gene66956 | 0.821678 | 3.55E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene66956 | 0.807161 | 5.79E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene66956 | 0.808333 | 3.26E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene66956 | 0.803856 | 2.85E-49 | -1.69E-46 |
| MS.gene055428 | MS.gene66956 | 0.805836 | 1.10E-49 | -1.69E-46 |
| MS.gene056931 | MS.gene66956 | 0.82825 | 9.98E-55 | -1.69E-46 |
| MS.gene056933 | MS.gene66956 | 0.831052 | 2.08E-55 | -1.69E-46 |
| MS.gene056935 | MS.gene66956 | 0.811072 | 8.40E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene66956 | 0.813374 | 2.64E-51 | -1.69E-46 |
| MS.gene059597 | MS.gene66956 | 0.819051 | 1.42E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene66956 | 0.823198 | 1.58E-53 | -1.69E-46 |
| MS.gene059692 | MS.gene66956 | 0.826896 | 2.11E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene66956 | 0.821172 | 4.65E-53 | -1.69E-46 |
| MS.gene059711 | MS.gene66956 | 0.845407 | 4.14E-59 | -1.69E-46 |
| MS.gene059974 | MS.gene66956 | 0.801988 | 6.94E-49 | -1.69E-46 |
| MS.gene060005 | MS.gene66956 | 0.80181 | 7.55E-49 | -1.69E-46 |
| MS.gene060559 | MS.gene66956 | 0.82934 | 5.44E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene66956 | MS.gene011681 | PPI |
| MS.gene44430 | MS.gene66956 | PPI |
| MS.gene011682 | MS.gene66956 | PPI |
| MS.gene45619 | MS.gene66956 | PPI |
| MS.gene31221 | MS.gene66956 | PPI |
| MS.gene44431 | MS.gene66956 | PPI |
| MS.gene60167 | MS.gene66956 | PPI |
| MS.gene66956 | MS.gene09167 | PPI |
| MS.gene43849 | MS.gene66956 | PPI |
| MS.gene049783 | MS.gene66956 | PPI |
| MS.gene028653 | MS.gene66956 | PPI |
| MS.gene43303 | MS.gene66956 | PPI |
| MS.gene45618 | MS.gene66956 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66956.t1 | MTR_6g033055 | 98.635 | 293 | 4 | 0 | 1 | 293 | 1 | 293 | 0.0 | 607 |
| MS.gene66956.t1 | MTR_6g033085 | 95.563 | 293 | 13 | 0 | 1 | 293 | 1 | 293 | 0.0 | 592 |
| MS.gene66956.t1 | MTR_7g084760 | 83.959 | 293 | 47 | 0 | 1 | 293 | 1 | 293 | 0.0 | 527 |
| MS.gene66956.t1 | MTR_7g084770 | 83.276 | 293 | 49 | 0 | 1 | 293 | 1 | 293 | 0.0 | 526 |
| MS.gene66956.t1 | MTR_7g084750 | 80.205 | 293 | 58 | 0 | 1 | 293 | 1 | 293 | 0.0 | 511 |
| MS.gene66956.t1 | MTR_4g128410 | 55.674 | 282 | 111 | 4 | 9 | 287 | 10 | 280 | 1.30e-105 | 309 |
| MS.gene66956.t1 | MTR_4g097640 | 51.773 | 282 | 129 | 3 | 7 | 287 | 12 | 287 | 8.16e-103 | 302 |
| MS.gene66956.t1 | MTR_4g097670 | 51.773 | 282 | 129 | 3 | 7 | 287 | 12 | 287 | 8.16e-103 | 302 |
| MS.gene66956.t1 | MTR_4g097700 | 54.475 | 257 | 115 | 2 | 32 | 287 | 69 | 324 | 4.51e-102 | 301 |
| MS.gene66956.t1 | MTR_4g045853 | 48.639 | 294 | 130 | 4 | 4 | 289 | 10 | 290 | 1.12e-101 | 299 |
| MS.gene66956.t1 | MTR_2g089140 | 48.110 | 291 | 134 | 5 | 8 | 289 | 6 | 288 | 8.60e-101 | 297 |
| MS.gene66956.t1 | MTR_7g093530 | 53.901 | 282 | 116 | 4 | 9 | 287 | 9 | 279 | 1.01e-99 | 294 |
| MS.gene66956.t1 | MTR_3g084620 | 51.379 | 290 | 124 | 4 | 3 | 291 | 8 | 281 | 1.72e-99 | 293 |
| MS.gene66956.t1 | MTR_3g084630 | 50.685 | 292 | 132 | 3 | 1 | 291 | 1 | 281 | 1.85e-99 | 293 |
| MS.gene66956.t1 | MTR_8g081040 | 54.651 | 258 | 110 | 3 | 32 | 288 | 31 | 282 | 4.53e-98 | 290 |
| MS.gene66956.t1 | MTR_4g128580 | 54.887 | 266 | 108 | 3 | 32 | 289 | 26 | 287 | 9.85e-98 | 289 |
| MS.gene66956.t1 | MTR_4g128570 | 51.943 | 283 | 117 | 4 | 7 | 288 | 9 | 273 | 3.21e-97 | 287 |
| MS.gene66956.t1 | MTR_4g128400 | 50.360 | 278 | 128 | 3 | 11 | 287 | 15 | 283 | 3.58e-94 | 280 |
| MS.gene66956.t1 | MTR_1g105495 | 48.239 | 284 | 143 | 2 | 9 | 288 | 12 | 295 | 7.88e-93 | 277 |
| MS.gene66956.t1 | MTR_4g126920 | 49.821 | 279 | 123 | 4 | 15 | 288 | 16 | 282 | 1.69e-91 | 273 |
| MS.gene66956.t1 | MTR_2g038860 | 47.959 | 294 | 132 | 4 | 7 | 291 | 9 | 290 | 2.49e-91 | 273 |
| MS.gene66956.t1 | MTR_2g038705 | 47.959 | 294 | 132 | 4 | 7 | 291 | 9 | 290 | 2.49e-91 | 273 |
| MS.gene66956.t1 | MTR_1g105900 | 46.975 | 281 | 144 | 3 | 10 | 288 | 15 | 292 | 4.22e-90 | 270 |
| MS.gene66956.t1 | MTR_8g102220 | 48.288 | 292 | 121 | 6 | 1 | 291 | 8 | 270 | 1.09e-89 | 268 |
| MS.gene66956.t1 | MTR_6g088320 | 47.727 | 264 | 132 | 4 | 28 | 287 | 22 | 283 | 1.65e-89 | 268 |
| MS.gene66956.t1 | MTR_8g102910 | 43.771 | 297 | 147 | 6 | 1 | 291 | 1 | 283 | 5.24e-89 | 267 |
| MS.gene66956.t1 | MTR_2g089140 | 52.000 | 225 | 100 | 2 | 73 | 289 | 1 | 225 | 1.38e-88 | 264 |
| MS.gene66956.t1 | MTR_8g013055 | 48.649 | 259 | 132 | 1 | 29 | 287 | 28 | 285 | 1.97e-87 | 263 |
| MS.gene66956.t1 | MTR_4g128590 | 46.102 | 295 | 123 | 5 | 2 | 287 | 8 | 275 | 4.96e-83 | 251 |
| MS.gene66956.t1 | MTR_5g091730 | 43.299 | 291 | 146 | 4 | 2 | 289 | 6 | 280 | 9.49e-78 | 238 |
| MS.gene66956.t1 | MTR_3g089540 | 46.721 | 244 | 125 | 2 | 51 | 293 | 49 | 288 | 1.23e-76 | 235 |
| MS.gene66956.t1 | MTR_7g056090 | 42.500 | 280 | 151 | 6 | 9 | 287 | 11 | 281 | 2.49e-72 | 224 |
| MS.gene66956.t1 | MTR_2g049030 | 45.211 | 261 | 130 | 9 | 29 | 287 | 27 | 276 | 4.97e-70 | 218 |
| MS.gene66956.t1 | MTR_2g049130 | 42.029 | 276 | 150 | 8 | 7 | 277 | 1 | 271 | 6.91e-65 | 205 |
| MS.gene66956.t1 | MTR_8g064180 | 35.452 | 299 | 172 | 5 | 9 | 287 | 13 | 310 | 2.97e-60 | 194 |
| MS.gene66956.t1 | MTR_4g057450 | 35.786 | 299 | 159 | 8 | 9 | 287 | 19 | 304 | 8.01e-59 | 190 |
| MS.gene66956.t1 | MTR_1g033420 | 36.271 | 295 | 173 | 6 | 5 | 290 | 6 | 294 | 5.03e-58 | 189 |
| MS.gene66956.t1 | MTR_5g029100 | 37.546 | 269 | 154 | 6 | 30 | 287 | 40 | 305 | 6.55e-56 | 184 |
| MS.gene66956.t1 | MTR_8g090100 | 35.986 | 289 | 163 | 7 | 11 | 288 | 5 | 282 | 1.41e-55 | 182 |
| MS.gene66956.t1 | MTR_7g102260 | 39.331 | 239 | 130 | 6 | 58 | 288 | 61 | 292 | 4.41e-55 | 180 |
| MS.gene66956.t1 | MTR_1g063020 | 37.453 | 267 | 150 | 7 | 29 | 287 | 37 | 294 | 4.85e-55 | 180 |
| MS.gene66956.t1 | MTR_2g095800 | 36.940 | 268 | 149 | 8 | 30 | 287 | 52 | 309 | 1.04e-53 | 177 |
| MS.gene66956.t1 | MTR_5g029100 | 39.024 | 246 | 135 | 7 | 54 | 287 | 32 | 274 | 4.44e-52 | 173 |
| MS.gene66956.t1 | MTR_8g479340 | 34.759 | 187 | 61 | 3 | 103 | 288 | 10 | 136 | 2.74e-27 | 103 |
| MS.gene66956.t1 | MTR_8g032640 | 31.609 | 174 | 111 | 4 | 54 | 225 | 33 | 200 | 3.96e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66956.t1 | AT5G13870 | 75.768 | 293 | 68 | 1 | 1 | 293 | 4 | 293 | 1.28e-174 | 484 |
| MS.gene66956.t1 | AT5G13870 | 75.768 | 293 | 68 | 1 | 1 | 293 | 4 | 293 | 1.28e-174 | 484 |
| MS.gene66956.t1 | AT5G13870 | 75.768 | 293 | 68 | 1 | 1 | 293 | 4 | 293 | 1.28e-174 | 484 |
| MS.gene66956.t1 | AT2G06850 | 73.129 | 294 | 76 | 2 | 1 | 292 | 3 | 295 | 4.83e-166 | 462 |
| MS.gene66956.t1 | AT2G06850 | 78.355 | 231 | 50 | 0 | 62 | 292 | 5 | 235 | 5.53e-143 | 402 |
| MS.gene66956.t1 | AT5G65730 | 50.877 | 285 | 133 | 3 | 4 | 287 | 12 | 290 | 3.35e-105 | 308 |
| MS.gene66956.t1 | AT3G23730 | 54.545 | 264 | 116 | 2 | 32 | 291 | 27 | 290 | 2.87e-103 | 303 |
| MS.gene66956.t1 | AT4G14130 | 51.903 | 289 | 124 | 4 | 7 | 291 | 11 | 288 | 3.93e-103 | 303 |
| MS.gene66956.t1 | AT5G57550 | 51.389 | 288 | 133 | 3 | 1 | 287 | 1 | 282 | 1.43e-101 | 299 |
| MS.gene66956.t1 | AT4G37800 | 52.326 | 258 | 121 | 2 | 32 | 288 | 34 | 290 | 1.91e-99 | 293 |
| MS.gene66956.t1 | AT5G57560 | 51.228 | 285 | 120 | 4 | 10 | 287 | 9 | 281 | 4.55e-99 | 292 |
| MS.gene66956.t1 | AT4G03210 | 47.766 | 291 | 144 | 3 | 5 | 293 | 6 | 290 | 2.91e-98 | 290 |
| MS.gene66956.t1 | AT4G25810 | 51.220 | 287 | 122 | 5 | 7 | 287 | 9 | 283 | 5.47e-97 | 287 |
| MS.gene66956.t1 | AT4G30270 | 51.056 | 284 | 112 | 5 | 9 | 288 | 6 | 266 | 3.31e-96 | 285 |
| MS.gene66956.t1 | AT4G13090 | 50.178 | 281 | 133 | 4 | 12 | 287 | 10 | 288 | 1.89e-95 | 283 |
| MS.gene66956.t1 | AT5G57530 | 55.336 | 253 | 105 | 4 | 39 | 287 | 34 | 282 | 7.79e-95 | 281 |
| MS.gene66956.t1 | AT5G57540 | 54.231 | 260 | 111 | 4 | 32 | 287 | 26 | 281 | 2.50e-94 | 280 |
| MS.gene66956.t1 | AT1G11545 | 48.951 | 286 | 136 | 4 | 9 | 288 | 19 | 300 | 8.33e-93 | 277 |
| MS.gene66956.t1 | AT4G03210 | 49.609 | 256 | 124 | 2 | 40 | 293 | 10 | 262 | 8.94e-92 | 273 |
| MS.gene66956.t1 | AT2G18800 | 49.817 | 273 | 118 | 4 | 32 | 288 | 28 | 297 | 4.73e-91 | 273 |
| MS.gene66956.t1 | AT4G28850 | 45.878 | 279 | 144 | 5 | 18 | 291 | 15 | 291 | 9.44e-89 | 266 |
| MS.gene66956.t1 | AT2G14620 | 47.876 | 259 | 133 | 2 | 32 | 288 | 37 | 295 | 2.76e-88 | 265 |
| MS.gene66956.t1 | AT3G25050 | 49.425 | 261 | 125 | 4 | 30 | 287 | 33 | 289 | 6.21e-88 | 264 |
| MS.gene66956.t1 | AT4G25820 | 49.458 | 277 | 124 | 4 | 15 | 287 | 21 | 285 | 1.87e-87 | 263 |
| MS.gene66956.t1 | AT4G13080 | 47.674 | 258 | 132 | 3 | 30 | 287 | 37 | 291 | 5.42e-86 | 259 |
| MS.gene66956.t1 | AT5G48070 | 51.452 | 241 | 111 | 3 | 49 | 288 | 47 | 282 | 1.20e-85 | 258 |
| MS.gene66956.t1 | AT2G14620 | 50.439 | 228 | 111 | 2 | 63 | 288 | 18 | 245 | 1.90e-81 | 246 |
| MS.gene66956.t1 | AT1G65310 | 52.863 | 227 | 101 | 3 | 63 | 288 | 83 | 304 | 3.12e-81 | 248 |
| MS.gene66956.t1 | AT1G65310 | 52.863 | 227 | 101 | 3 | 63 | 288 | 61 | 282 | 3.30e-81 | 247 |
| MS.gene66956.t1 | AT4G30280 | 51.982 | 227 | 103 | 3 | 63 | 288 | 61 | 282 | 4.62e-81 | 246 |
| MS.gene66956.t1 | AT4G30290 | 51.867 | 241 | 110 | 3 | 49 | 288 | 42 | 277 | 1.33e-80 | 245 |
| MS.gene66956.t1 | AT2G14620 | 50.909 | 220 | 106 | 2 | 71 | 288 | 15 | 234 | 1.42e-79 | 241 |
| MS.gene66956.t1 | AT3G44990 | 39.456 | 294 | 152 | 10 | 9 | 287 | 11 | 293 | 1.12e-60 | 195 |
| MS.gene66956.t1 | AT1G32170 | 35.117 | 299 | 163 | 6 | 5 | 288 | 12 | 294 | 6.31e-57 | 187 |
| MS.gene66956.t1 | AT3G48580 | 39.768 | 259 | 138 | 6 | 30 | 287 | 32 | 273 | 1.56e-56 | 184 |
| MS.gene66956.t1 | AT1G14720 | 34.965 | 286 | 178 | 5 | 9 | 288 | 8 | 291 | 7.67e-56 | 183 |
| MS.gene66956.t1 | AT1G10550 | 38.735 | 253 | 136 | 6 | 51 | 287 | 60 | 309 | 8.80e-56 | 182 |
| MS.gene66956.t1 | AT2G36870 | 40.417 | 240 | 128 | 5 | 58 | 289 | 67 | 299 | 1.86e-54 | 179 |
| MS.gene66956.t1 | AT2G01850 | 35.154 | 293 | 177 | 8 | 3 | 288 | 5 | 291 | 2.92e-53 | 177 |
| MS.gene66956.t1 | AT4G18990 | 37.008 | 254 | 139 | 5 | 54 | 288 | 62 | 313 | 5.45e-51 | 172 |
| MS.gene66956.t1 | AT3G48580 | 40.088 | 227 | 119 | 5 | 62 | 287 | 4 | 214 | 1.12e-49 | 164 |
| MS.gene66956.t1 | AT3G48580 | 34.363 | 259 | 132 | 7 | 30 | 287 | 32 | 253 | 2.77e-41 | 144 |
| MS.gene66956.t1 | AT4G18990 | 34.978 | 223 | 117 | 5 | 92 | 288 | 19 | 239 | 6.46e-41 | 143 |
| MS.gene66956.t1 | AT2G36870 | 45.536 | 112 | 53 | 2 | 58 | 161 | 67 | 178 | 3.20e-27 | 104 |
Find 60 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCATCATGTTCTGCATTT+TGG | 0.090231 | 6.1:+11772347 | None:intergenic |
| TGAAAATATACAATAGTTTA+TGG | 0.145009 | 6.1:-11771051 | MS.gene66956:CDS |
| TCCAAAGGGTCTTATTTATT+TGG | 0.166110 | 6.1:-11772705 | MS.gene66956:CDS |
| TAATAAGTACTTACACAATT+TGG | 0.177004 | 6.1:+11772170 | None:intergenic |
| ATGTTCTTGAACACCCTTAT+TGG | 0.186258 | 6.1:+11771112 | None:intergenic |
| GATCATATCAAATACTTAAA+TGG | 0.261028 | 6.1:-11773751 | MS.gene66956:CDS |
| TACAAAGGGTTTCATATTGA+TGG | 0.286250 | 6.1:-11770956 | MS.gene66956:CDS |
| GAGAACAAAGAATTTATCTT+TGG | 0.295346 | 6.1:-11772243 | MS.gene66956:CDS |
| TTGTGGATGATATTCCAATA+AGG | 0.311508 | 6.1:-11771126 | MS.gene66956:CDS |
| GTCGTAATTATGTGCCTACT+TGG | 0.343620 | 6.1:-11773780 | MS.gene66956:CDS |
| ACATCAAGATCATGAAATTC+AGG | 0.345599 | 6.1:+11770872 | None:intergenic |
| ACCAAATAAATAAGACCCTT+TGG | 0.370193 | 6.1:+11772704 | None:intergenic |
| CTCAATGGCAAAGGCTAAGA+TGG | 0.402835 | 6.1:-11770847 | MS.gene66956:CDS |
| TTCAAGAACATCAATCAGTT+AGG | 0.408800 | 6.1:-11771100 | MS.gene66956:CDS |
| AGATCATGAATTCTTCTTTG+TGG | 0.412540 | 6.1:-11773882 | None:intergenic |
| TGTGGATGATATTCCAATAA+GGG | 0.413494 | 6.1:-11771125 | MS.gene66956:CDS |
| ACTCCTGTTGATGTTCCATT+TGG | 0.413889 | 6.1:-11773802 | MS.gene66956:CDS |
| CCCTTTGTAAGAGGCTATGA+AGG | 0.414088 | 6.1:+11770970 | None:intergenic |
| AGAGGCTATGAAGGGTGCTT+TGG | 0.415798 | 6.1:+11770979 | None:intergenic |
| GTTTATGGAATGCTGATGAT+TGG | 0.416209 | 6.1:-11771036 | MS.gene66956:CDS |
| CGACCAAATGGAACATCAAC+AGG | 0.417482 | 6.1:+11773799 | None:intergenic |
| ACATTTGTTTGTAAAATGTA+TGG | 0.428949 | 6.1:+11772289 | None:intergenic |
| AATATGAAACCCTTTGTAAG+AGG | 0.460984 | 6.1:+11770961 | None:intergenic |
| TTGGGCCACAAGGGGTGGAT+TGG | 0.461492 | 6.1:-11771017 | MS.gene66956:CDS |
| ATAAATAAGACCCTTTGGAT+TGG | 0.463620 | 6.1:+11772709 | None:intergenic |
| GGAACATCAACAGGAGTCCT+TGG | 0.467558 | 6.1:+11773808 | None:intergenic |
| GGCACATAATTACGACCAAA+TGG | 0.477157 | 6.1:+11773787 | None:intergenic |
| GAGTTCTTAGGGAACAGAAC+AGG | 0.482915 | 6.1:-11772316 | MS.gene66956:CDS |
| CTCAAGAGTGTACAAGAGAC+AGG | 0.483543 | 6.1:-11770763 | MS.gene66956:CDS |
| TATGGAATGCAGTTTCTTTG+TGG | 0.485427 | 6.1:-11771143 | MS.gene66956:intron |
| TCAAGAACATCAATCAGTTA+GGG | 0.487977 | 6.1:-11771099 | MS.gene66956:CDS |
| ATCACAGATATTCTGTGTTG+TGG | 0.499456 | 6.1:-11772201 | MS.gene66956:CDS |
| TACACTCTTGAGGAACTTGA+GGG | 0.504511 | 6.1:+11770774 | None:intergenic |
| CCCTTCATAGCCTCTTACAA+AGG | 0.505336 | 6.1:-11770971 | MS.gene66956:CDS |
| CCTTCATAGCCTCTTACAAA+GGG | 0.513581 | 6.1:-11770970 | MS.gene66956:CDS |
| ATGGTACCTGGTGATTCAGC+TGG | 0.518135 | 6.1:-11772660 | MS.gene66956:CDS |
| TTTATGGAATGCTGATGATT+GGG | 0.520881 | 6.1:-11771035 | MS.gene66956:CDS |
| CTTAATCTTGATAAATCCAC+TGG | 0.526040 | 6.1:-11773712 | MS.gene66956:intron |
| CTGTCTCTTGTACACTCTTG+AGG | 0.529530 | 6.1:+11770764 | None:intergenic |
| ATGATCTTGATGTTGCTCAA+TGG | 0.530924 | 6.1:-11770862 | MS.gene66956:CDS |
| TCGTAATTATGTGCCTACTT+GGG | 0.537039 | 6.1:-11773779 | MS.gene66956:CDS |
| GATGATTGGGCCACAAGGGG+TGG | 0.538500 | 6.1:-11771022 | MS.gene66956:CDS |
| CTTCAGTATGTACATAAGAA+TGG | 0.540587 | 6.1:-11772679 | MS.gene66956:CDS |
| TTTCTCCAATCCACCCCTTG+TGG | 0.544658 | 6.1:+11771012 | None:intergenic |
| GTACACTCTTGAGGAACTTG+AGG | 0.544701 | 6.1:+11770773 | None:intergenic |
| ATGCTGATGATTGGGCCACA+AGG | 0.558889 | 6.1:-11771027 | MS.gene66956:CDS |
| TGCTGATGATTGGGCCACAA+GGG | 0.560025 | 6.1:-11771026 | MS.gene66956:CDS |
| TTGATGTTGCTCAATGGCAA+AGG | 0.585400 | 6.1:-11770856 | MS.gene66956:CDS |
| GTGGATTGGAGAAAACAGAT+TGG | 0.591719 | 6.1:-11771003 | MS.gene66956:CDS |
| GGTACTGGCTTCCAATCCAA+AGG | 0.596794 | 6.1:-11772720 | MS.gene66956:CDS |
| GTACTGGCTTCCAATCCAAA+GGG | 0.598591 | 6.1:-11772719 | MS.gene66956:CDS |
| CATATCAAATACTTAAATGG+TGG | 0.615790 | 6.1:-11773748 | MS.gene66956:CDS |
| TCAATGGCAAAGGCTAAGAT+GGG | 0.621555 | 6.1:-11770846 | MS.gene66956:CDS |
| GCTGATGATTGGGCCACAAG+GGG | 0.635602 | 6.1:-11771025 | MS.gene66956:CDS |
| ATATGATCATAAGCCCAAGT+AGG | 0.638602 | 6.1:+11773766 | None:intergenic |
| CCTTTGTAAGAGGCTATGAA+GGG | 0.655937 | 6.1:+11770971 | None:intergenic |
| ACTGTTCCAGCTGAATCACC+AGG | 0.670532 | 6.1:+11772654 | None:intergenic |
| ATGTACATAAGAATGGTACC+TGG | 0.672045 | 6.1:-11772672 | MS.gene66956:CDS |
| CAAGAACATCAATCAGTTAG+GGG | 0.677246 | 6.1:-11771098 | MS.gene66956:CDS |
| TCAAGAGTGTACAAGAGACA+GGG | 0.692764 | 6.1:-11770762 | MS.gene66956:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATGTTTAATAATTTGA+CGG | + | chr6.1:11772109-11772128 | None:intergenic | 10.0% |
| !! | TTATTTCAAAATAAATTAGA+GGG | - | chr6.1:11771633-11771652 | MS.gene66956:intron | 10.0% |
| !! | TTTATCACAAATATAAAAAT+AGG | - | chr6.1:11771416-11771435 | MS.gene66956:intron | 10.0% |
| !! | TTTATTTCAAAATAAATTAG+AGG | - | chr6.1:11771632-11771651 | MS.gene66956:intron | 10.0% |
| !!! | AGAACAATATTTTTTTTTAT+AGG | - | chr6.1:11770978-11770997 | MS.gene66956:CDS | 10.0% |
| !!! | AGTTTTATTATTATGAATTT+TGG | - | chr6.1:11771670-11771689 | MS.gene66956:intron | 10.0% |
| !!! | TAATTTATTTATTTTTTGAG+GGG | + | chr6.1:11773203-11773222 | None:intergenic | 10.0% |
| !! | GAAAAAAAAAAGTAGTAATA+AGG | + | chr6.1:11771491-11771510 | None:intergenic | 15.0% |
| !! | TCACATAATCAATAATAATT+GGG | - | chr6.1:11772507-11772526 | MS.gene66956:intron | 15.0% |
| !! | TGAAAATATACAATAGTTTA+TGG | - | chr6.1:11773580-11773599 | MS.gene66956:intron | 15.0% |
| !! | TTCACATAATCAATAATAAT+TGG | - | chr6.1:11772506-11772525 | MS.gene66956:intron | 15.0% |
| !!! | AAACTATTGTATATTTTCAT+TGG | + | chr6.1:11773579-11773598 | None:intergenic | 15.0% |
| !!! | AATTTATTTATTTTTTGAGG+GGG | + | chr6.1:11773202-11773221 | None:intergenic | 15.0% |
| !!! | ATAATAAAACTCTCTATTTT+TGG | + | chr6.1:11771661-11771680 | None:intergenic | 15.0% |
| !!! | ATGTAATTATTTTTTACCAA+TGG | + | chr6.1:11772070-11772089 | None:intergenic | 15.0% |
| !!! | ATTTGATTTATATATACCAT+TGG | - | chr6.1:11772051-11772070 | MS.gene66956:intron | 15.0% |
| !!! | ATTTTCTAAATTATCGTTTA+AGG | - | chr6.1:11773284-11773303 | MS.gene66956:intron | 15.0% |
| !!! | CTTACTTATTTACATTTTTT+TGG | - | chr6.1:11771055-11771074 | MS.gene66956:CDS | 15.0% |
| !!! | TAACAAAAATGAGTTTTATT+AGG | + | chr6.1:11771863-11771882 | None:intergenic | 15.0% |
| !!! | TAATAAAACTCTCTATTTTT+GGG | + | chr6.1:11771660-11771679 | None:intergenic | 15.0% |
| !!! | TTTTCTAAATTATCGTTTAA+GGG | - | chr6.1:11773285-11773304 | MS.gene66956:intron | 15.0% |
| !!! | TTTTTTTTTATAGGTTTCTA+TGG | - | chr6.1:11770987-11771006 | MS.gene66956:CDS | 15.0% |
| !! | AAAAACCTTATTATCTTTCT+TGG | + | chr6.1:11772843-11772862 | None:intergenic | 20.0% |
| !! | AATGTAAAGTCAAAATAAGT+TGG | + | chr6.1:11772244-11772263 | None:intergenic | 20.0% |
| !! | ACAACAAAAATCATGTTAAA+AGG | + | chr6.1:11773413-11773432 | None:intergenic | 20.0% |
| !! | ACATTTGTTTGTAAAATGTA+TGG | + | chr6.1:11772345-11772364 | None:intergenic | 20.0% |
| !! | ATGTAAAGTCAAAATAAGTT+GGG | + | chr6.1:11772243-11772262 | None:intergenic | 20.0% |
| !! | CTCTTATAAAAACTCAAATA+TGG | - | chr6.1:11773470-11773489 | MS.gene66956:intron | 20.0% |
| !! | GATCATATCAAATACTTAAA+TGG | - | chr6.1:11770880-11770899 | MS.gene66956:CDS | 20.0% |
| !! | TAATAAGTACTTACACAATT+TGG | + | chr6.1:11772464-11772483 | None:intergenic | 20.0% |
| !! | TAGTGTAGGTAAAATTATTA+TGG | + | chr6.1:11772704-11772723 | None:intergenic | 20.0% |
| !! | TGAAATAAAAAGAAATAGAG+AGG | + | chr6.1:11771621-11771640 | None:intergenic | 20.0% |
| !! | TTCTTACATCAACATTTATA+AGG | - | chr6.1:11771508-11771527 | MS.gene66956:intron | 20.0% |
| !!! | AAACTTTAGAGTTCAATTTT+GGG | - | chr6.1:11772747-11772766 | MS.gene66956:intron | 20.0% |
| !!! | AACATTTTAATGTCCTATTT+AGG | - | chr6.1:11771098-11771117 | MS.gene66956:CDS | 20.0% |
| !!! | AACTTATTTTGACTTTACAT+TGG | - | chr6.1:11772243-11772262 | MS.gene66956:CDS | 20.0% |
| !!! | ATAAGGAATGTACTTTTATA+GGG | - | chr6.1:11771525-11771544 | MS.gene66956:intron | 20.0% |
| !!! | ATTTTCTTAGAAAAACTAAG+AGG | - | chr6.1:11771792-11771811 | MS.gene66956:intron | 20.0% |
| !!! | TAAAGTTTGAGGTAAAAATA+TGG | + | chr6.1:11772735-11772754 | None:intergenic | 20.0% |
| !!! | TATAAGGAATGTACTTTTAT+AGG | - | chr6.1:11771524-11771543 | MS.gene66956:intron | 20.0% |
| !!! | TATTGTATATTTTCATTGGT+TGG | + | chr6.1:11773575-11773594 | None:intergenic | 20.0% |
| ! | AACTACCAAGAAAGATAATA+AGG | - | chr6.1:11772835-11772854 | MS.gene66956:intron | 25.0% |
| ! | ACAATGCATAAAAATATGCA+AGG | + | chr6.1:11773126-11773145 | None:intergenic | 25.0% |
| ! | ACATTCATATTCTTAGAACT+GGG | + | chr6.1:11771722-11771741 | None:intergenic | 25.0% |
| ! | ACTAATAGACAATTAGGAAA+AGG | + | chr6.1:11771836-11771855 | None:intergenic | 25.0% |
| ! | CATATCAAATACTTAAATGG+TGG | - | chr6.1:11770883-11770902 | MS.gene66956:CDS | 25.0% |
| ! | CATTTGGATTTAAAAAACGT+AGG | + | chr6.1:11773052-11773071 | None:intergenic | 25.0% |
| ! | GAGAACAAAGAATTTATCTT+TGG | - | chr6.1:11772388-11772407 | MS.gene66956:intron | 25.0% |
| ! | GGTATAACTAATAGACAATT+AGG | + | chr6.1:11771842-11771861 | None:intergenic | 25.0% |
| ! | TAAAAAGAGCAACTTTACAT+TGG | - | chr6.1:11772570-11772589 | MS.gene66956:intron | 25.0% |
| ! | TACATTCATATTCTTAGAAC+TGG | + | chr6.1:11771723-11771742 | None:intergenic | 25.0% |
| ! | TAGTAAGTGATAAACTTATG+TGG | - | chr6.1:11771266-11771285 | MS.gene66956:intron | 25.0% |
| ! | TTATGATCATTAGAGTCAAA+TGG | + | chr6.1:11772798-11772817 | None:intergenic | 25.0% |
| !! | AATGTAAAGTTGCTCTTTTT+AGG | + | chr6.1:11772571-11772590 | None:intergenic | 25.0% |
| !! | ATGCAATTTTTGTACATAAC+AGG | - | chr6.1:11771890-11771909 | MS.gene66956:intron | 25.0% |
| !! | CTTTTATAGGGTGTAAAATA+TGG | - | chr6.1:11771537-11771556 | MS.gene66956:intron | 25.0% |
| !! | TTACAAACAAATGTTTTCAC+AGG | - | chr6.1:11772351-11772370 | MS.gene66956:CDS | 25.0% |
| !!! | AAATTGAACTCTAAAGTTTG+AGG | + | chr6.1:11772746-11772765 | None:intergenic | 25.0% |
| !!! | AGATAGATTTTGAGTTCTTA+GGG | - | chr6.1:11772304-11772323 | MS.gene66956:CDS | 25.0% |
| !!! | ATGCGTTAACTCTTATTTTT+TGG | - | chr6.1:11773075-11773094 | MS.gene66956:intron | 25.0% |
| !!! | CAAACTTTAGAGTTCAATTT+TGG | - | chr6.1:11772746-11772765 | MS.gene66956:intron | 25.0% |
| !!! | TAACTCTTATTTTTTGGTAG+TGG | - | chr6.1:11773081-11773100 | MS.gene66956:intron | 25.0% |
| AAATGATAATAGCATACCAG+TGG | + | chr6.1:11770938-11770957 | None:intergenic | 30.0% | |
| AATATGAAACCCTTTGTAAG+AGG | + | chr6.1:11773673-11773692 | None:intergenic | 30.0% | |
| ACATCAAGATCATGAAATTC+AGG | + | chr6.1:11773762-11773781 | None:intergenic | 30.0% | |
| ACCAAATAAATAAGACCCTT+TGG | + | chr6.1:11771930-11771949 | None:intergenic | 30.0% | |
| ATAAATAAGACCCTTTGGAT+TGG | + | chr6.1:11771925-11771944 | None:intergenic | 30.0% | |
| CATTCATATTCTTAGAACTG+GGG | + | chr6.1:11771721-11771740 | None:intergenic | 30.0% | |
| CTTAATCTTGATAAATCCAC+TGG | - | chr6.1:11770919-11770938 | MS.gene66956:CDS | 30.0% | |
| CTTCAGTATGTACATAAGAA+TGG | - | chr6.1:11771952-11771971 | MS.gene66956:intron | 30.0% | |
| TAAAACTTGCAGTATCTAAG+TGG | - | chr6.1:11771354-11771373 | MS.gene66956:intron | 30.0% | |
| TACAAAGGGTTTCATATTGA+TGG | - | chr6.1:11773675-11773694 | MS.gene66956:intron | 30.0% | |
| TCAAGAACATCAATCAGTTA+GGG | - | chr6.1:11773532-11773551 | MS.gene66956:intron | 30.0% | |
| TGTGGATGATATTCCAATAA+GGG | - | chr6.1:11773506-11773525 | MS.gene66956:intron | 30.0% | |
| TTCAAGAACATCAATCAGTT+AGG | - | chr6.1:11773531-11773550 | MS.gene66956:intron | 30.0% | |
| TTGACGATGTGATATTGTTT+AGG | - | chr6.1:11771297-11771316 | MS.gene66956:intron | 30.0% | |
| TTGTGGATGATATTCCAATA+AGG | - | chr6.1:11773505-11773524 | MS.gene66956:intron | 30.0% | |
| TTTATGGAATGCTGATGATT+GGG | - | chr6.1:11773596-11773615 | MS.gene66956:intron | 30.0% | |
| ! | GTCACAAAATTTTGCATTCA+CGG | + | chr6.1:11773712-11773731 | None:intergenic | 30.0% |
| ! | GTTTGAGGTAAAAATATGGA+TGG | + | chr6.1:11772731-11772750 | None:intergenic | 30.0% |
| ! | TATCTGTGATAAGCTTTTGT+AGG | + | chr6.1:11772420-11772439 | None:intergenic | 30.0% |
| ! | TTTTTGTACATAACAGGTAC+TGG | - | chr6.1:11771896-11771915 | MS.gene66956:intron | 30.0% |
| !! | ATTTTCATTGGTTGGCTAAA+TGG | + | chr6.1:11773567-11773586 | None:intergenic | 30.0% |
| !! | TCCAAAGGGTCTTATTTATT+TGG | - | chr6.1:11771926-11771945 | MS.gene66956:intron | 30.0% |
| !! | TTTTCATTGGTTGGCTAAAT+GGG | + | chr6.1:11773566-11773585 | None:intergenic | 30.0% |
| !!! | GAGATAGATTTTGAGTTCTT+AGG | - | chr6.1:11772303-11772322 | MS.gene66956:CDS | 30.0% |
| AGAGTTAACGCATGAACATT+TGG | + | chr6.1:11773068-11773087 | None:intergenic | 35.0% | |
| ATAAAAATATGCAAGGTCCG+GGG | + | chr6.1:11773119-11773138 | None:intergenic | 35.0% | |
| ATATGATCATAAGCCCAAGT+AGG | + | chr6.1:11770868-11770887 | None:intergenic | 35.0% | |
| ATATGGATGGTGAATAGTGT+AGG | + | chr6.1:11772718-11772737 | None:intergenic | 35.0% | |
| ATCACAGATATTCTGTGTTG+TGG | - | chr6.1:11772430-11772449 | MS.gene66956:intron | 35.0% | |
| ATGATCTTGATGTTGCTCAA+TGG | - | chr6.1:11773769-11773788 | MS.gene66956:CDS | 35.0% | |
| ATGTACATAAGAATGGTACC+TGG | - | chr6.1:11771959-11771978 | MS.gene66956:intron | 35.0% | |
| ATGTTCTTGAACACCCTTAT+TGG | + | chr6.1:11773522-11773541 | None:intergenic | 35.0% | |
| CAAACTTGCGTTATCAAGTT+CGG | - | chr6.1:11771124-11771143 | MS.gene66956:CDS | 35.0% | |
| CAAGAACATCAATCAGTTAG+GGG | - | chr6.1:11773533-11773552 | MS.gene66956:intron | 35.0% | |
| CATAAAAATATGCAAGGTCC+GGG | + | chr6.1:11773120-11773139 | None:intergenic | 35.0% | |
| GCATAAAAATATGCAAGGTC+CGG | + | chr6.1:11773121-11773140 | None:intergenic | 35.0% | |
| GTTTATGGAATGCTGATGAT+TGG | - | chr6.1:11773595-11773614 | MS.gene66956:intron | 35.0% | |
| TATGGAATGCAGTTTCTTTG+TGG | - | chr6.1:11773488-11773507 | MS.gene66956:intron | 35.0% | |
| TCATTAGAGTCAAATGGAGA+AGG | + | chr6.1:11772792-11772811 | None:intergenic | 35.0% | |
| TCGTAATTATGTGCCTACTT+GGG | - | chr6.1:11770852-11770871 | MS.gene66956:CDS | 35.0% | |
| TTTCTTAACATGTGCCCTTA+GGG | + | chr6.1:11772548-11772567 | None:intergenic | 35.0% | |
| ! | AAAAAACGTAGGCTTTTGAG+AGG | + | chr6.1:11773041-11773060 | None:intergenic | 35.0% |
| ! | CAAACAAATGTTTTCACAGG+TGG | - | chr6.1:11772354-11772373 | MS.gene66956:CDS | 35.0% |
| ! | CTCATCATGTTCTGCATTTT+GGG | + | chr6.1:11772286-11772305 | None:intergenic | 35.0% |
| ! | GCAAAATTTTGTGACACACA+AGG | - | chr6.1:11773717-11773736 | MS.gene66956:CDS | 35.0% |
| ! | TCTCATCATGTTCTGCATTT+TGG | + | chr6.1:11772287-11772306 | None:intergenic | 35.0% |
| !! | AAAAACGTAGGCTTTTGAGA+GGG | + | chr6.1:11773040-11773059 | None:intergenic | 35.0% |
| !! | ATTTTGGGAAGATAACTGCA+TGG | + | chr6.1:11772271-11772290 | None:intergenic | 35.0% |
| !!! | TCTTATTTTTTGGTAGTGGC+CGG | - | chr6.1:11773085-11773104 | MS.gene66956:intron | 35.0% |
| ACACACAAGGAAAAAGATGG+TGG | - | chr6.1:11773730-11773749 | MS.gene66956:CDS | 40.0% | |
| ACTCCTGTTGATGTTCCATT+TGG | - | chr6.1:11770829-11770848 | MS.gene66956:CDS | 40.0% | |
| CACACAAGGAAAAAGATGGT+GGG | - | chr6.1:11773731-11773750 | MS.gene66956:CDS | 40.0% | |
| CCTTCATAGCCTCTTACAAA+GGG | - | chr6.1:11773661-11773680 | MS.gene66956:intron | 40.0% | |
| CCTTTGTAAGAGGCTATGAA+GGG | + | chr6.1:11773663-11773682 | None:intergenic | 40.0% | |
| CGCAAGTTTGTGACCTAAAT+AGG | + | chr6.1:11771114-11771133 | None:intergenic | 40.0% | |
| GGCACATAATTACGACCAAA+TGG | + | chr6.1:11770847-11770866 | None:intergenic | 40.0% | |
| GTCGTAATTATGTGCCTACT+TGG | - | chr6.1:11770851-11770870 | MS.gene66956:CDS | 40.0% | |
| GTGACACACAAGGAAAAAGA+TGG | - | chr6.1:11773727-11773746 | MS.gene66956:CDS | 40.0% | |
| GTTTCTTAACATGTGCCCTT+AGG | + | chr6.1:11772549-11772568 | None:intergenic | 40.0% | |
| TACACTCTTGAGGAACTTGA+GGG | + | chr6.1:11773860-11773879 | None:intergenic | 40.0% | |
| TCAATGGCAAAGGCTAAGAT+GGG | - | chr6.1:11773785-11773804 | MS.gene66956:CDS | 40.0% | |
| TTGATGTTGCTCAATGGCAA+AGG | - | chr6.1:11773775-11773794 | MS.gene66956:CDS | 40.0% | |
| ! | AATGTTTTCACAGGTGGCAA+AGG | - | chr6.1:11772360-11772379 | MS.gene66956:intron | 40.0% |
| ! | CTTCTTTTGCTGCAAATCCA+AGG | - | chr6.1:11770806-11770825 | MS.gene66956:CDS | 40.0% |
| ! | TCAAGAGTGTACAAGAGACA+GGG | - | chr6.1:11773869-11773888 | MS.gene66956:CDS | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | chr6.1:11772679-11772698 | None:intergenic | 40.0% |
| !! | ATGTTAACTTGTGCCCTCAA+GGG | + | chr6.1:11772678-11772697 | None:intergenic | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | - | chr6.1:11772531-11772550 | MS.gene66956:intron | 40.0% |
| !! | GTGGATTGGAGAAAACAGAT+TGG | - | chr6.1:11773628-11773647 | MS.gene66956:intron | 40.0% |
| !! | TCATGTTAACTTGTGCCCTA+AGG | - | chr6.1:11772530-11772549 | MS.gene66956:intron | 40.0% |
| !!! | CTTATTTTTTGGTAGTGGCC+GGG | - | chr6.1:11773086-11773105 | MS.gene66956:intron | 40.0% |
| !!! | TTATTTTTTGGTAGTGGCCG+GGG | - | chr6.1:11773087-11773106 | MS.gene66956:intron | 40.0% |
| CCCTTCATAGCCTCTTACAA+AGG | - | chr6.1:11773660-11773679 | MS.gene66956:intron | 45.0% | |
| CCCTTTGTAAGAGGCTATGA+AGG | + | chr6.1:11773664-11773683 | None:intergenic | 45.0% | |
| CGACCAAATGGAACATCAAC+AGG | + | chr6.1:11770835-11770854 | None:intergenic | 45.0% | |
| CTCAATGGCAAAGGCTAAGA+TGG | - | chr6.1:11773784-11773803 | MS.gene66956:CDS | 45.0% | |
| CTGTCTCTTGTACACTCTTG+AGG | + | chr6.1:11773870-11773889 | None:intergenic | 45.0% | |
| GAGTTCTTAGGGAACAGAAC+AGG | - | chr6.1:11772315-11772334 | MS.gene66956:CDS | 45.0% | |
| GTACACTCTTGAGGAACTTG+AGG | + | chr6.1:11773861-11773880 | None:intergenic | 45.0% | |
| TGCTTAACATGTGCCCTTGA+GGG | - | chr6.1:11772662-11772681 | MS.gene66956:CDS | 45.0% | |
| TTGCTTAACATGTGCCCTTG+AGG | - | chr6.1:11772661-11772680 | MS.gene66956:CDS | 45.0% | |
| ! | CTCAAGAGTGTACAAGAGAC+AGG | - | chr6.1:11773868-11773887 | MS.gene66956:CDS | 45.0% |
| !! | GTACTGGCTTCCAATCCAAA+GGG | - | chr6.1:11771912-11771931 | MS.gene66956:intron | 45.0% |
| !!! | AATTGTTTTATAAAATAAAA+AGG | - | chr6.1:11773309-11773328 | MS.gene66956:intron | 5.0% |
| !!! | ATTAATTTATTTATTTTTTG+AGG | + | chr6.1:11773205-11773224 | None:intergenic | 5.0% |
| !!! | TTAATTTATTTATTTTTTGA+GGG | + | chr6.1:11773204-11773223 | None:intergenic | 5.0% |
| !!! | TTATTTTAAATCTATAATAT+TGG | - | chr6.1:11771210-11771229 | MS.gene66956:intron | 5.0% |
| ACTGTTCCAGCTGAATCACC+AGG | + | chr6.1:11771980-11771999 | None:intergenic | 50.0% | |
| ATGCTGATGATTGGGCCACA+AGG | - | chr6.1:11773604-11773623 | MS.gene66956:intron | 50.0% | |
| ATGGTACCTGGTGATTCAGC+TGG | - | chr6.1:11771971-11771990 | MS.gene66956:intron | 50.0% | |
| GGAACATCAACAGGAGTCCT+TGG | + | chr6.1:11770826-11770845 | None:intergenic | 50.0% | |
| TGCTGATGATTGGGCCACAA+GGG | - | chr6.1:11773605-11773624 | MS.gene66956:intron | 50.0% | |
| TTTCTCCAATCCACCCCTTG+TGG | + | chr6.1:11773622-11773641 | None:intergenic | 50.0% | |
| !! | AGAGGCTATGAAGGGTGCTT+TGG | + | chr6.1:11773655-11773674 | None:intergenic | 50.0% |
| !! | GGTACTGGCTTCCAATCCAA+AGG | - | chr6.1:11771911-11771930 | MS.gene66956:intron | 50.0% |
| GCGAGCTTAGCTCAGTTGGT+TGG | + | chr6.1:11773149-11773168 | None:intergenic | 55.0% | |
| GCTGATGATTGGGCCACAAG+GGG | - | chr6.1:11773606-11773625 | MS.gene66956:intron | 55.0% | |
| AAGGTCCGGGGTTCAAACCC+CGG | + | chr6.1:11773107-11773126 | None:intergenic | 60.0% | |
| CCAACTGAGCTAAGCTCGCG+AGG | - | chr6.1:11773150-11773169 | MS.gene66956:intron | 60.0% | |
| CCTCGCGAGCTTAGCTCAGT+TGG | + | chr6.1:11773153-11773172 | None:intergenic | 60.0% | |
| GATGATTGGGCCACAAGGGG+TGG | - | chr6.1:11773609-11773628 | MS.gene66956:intron | 60.0% | |
| TTGGGCCACAAGGGGTGGAT+TGG | - | chr6.1:11773614-11773633 | MS.gene66956:intron | 60.0% | |
| AGTGGCCGGGGTTTGAACCC+CGG | - | chr6.1:11773099-11773118 | MS.gene66956:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 11770754 | 11773899 | 11770754 | ID=MS.gene66956 |
| chr6.1 | mRNA | 11770754 | 11773899 | 11770754 | ID=MS.gene66956.t1;Parent=MS.gene66956 |
| chr6.1 | exon | 11773713 | 11773899 | 11773713 | ID=MS.gene66956.t1.exon1;Parent=MS.gene66956.t1 |
| chr6.1 | CDS | 11773713 | 11773899 | 11773713 | ID=cds.MS.gene66956.t1;Parent=MS.gene66956.t1 |
| chr6.1 | exon | 11772641 | 11772741 | 11772641 | ID=MS.gene66956.t1.exon2;Parent=MS.gene66956.t1 |
| chr6.1 | CDS | 11772641 | 11772741 | 11772641 | ID=cds.MS.gene66956.t1;Parent=MS.gene66956.t1 |
| chr6.1 | exon | 11772184 | 11772377 | 11772184 | ID=MS.gene66956.t1.exon3;Parent=MS.gene66956.t1 |
| chr6.1 | CDS | 11772184 | 11772377 | 11772184 | ID=cds.MS.gene66956.t1;Parent=MS.gene66956.t1 |
| chr6.1 | exon | 11770754 | 11771153 | 11770754 | ID=MS.gene66956.t1.exon4;Parent=MS.gene66956.t1 |
| chr6.1 | CDS | 11770754 | 11771153 | 11770754 | ID=cds.MS.gene66956.t1;Parent=MS.gene66956.t1 |
| Gene Sequence |
| Protein sequence |
