Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67246.t1 | XP_024639509.1 | 90.6 | 678 | 63 | 1 | 1 | 677 | 1 | 678 | 0.00E+00 | 1218.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67246.t1 | Q9FGH9 | 45.1 | 452 | 224 | 11 | 234 | 672 | 176 | 616 | 1.4e-90 | 335.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67246.t1 | A0A396HTL8 | 90.6 | 678 | 63 | 1 | 1 | 677 | 1 | 678 | 0.0e+00 | 1218.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049153 | MS.gene67246 | 0.802761 | 4.81E-49 | -1.69E-46 |
| MS.gene049910 | MS.gene67246 | 0.817522 | 3.16E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene67246 | 0.810508 | 1.11E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene67246 | -0.832631 | 8.47E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene67246 | 0.824767 | 6.75E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene67246 | 0.832209 | 1.08E-55 | -1.69E-46 |
| MS.gene051582 | MS.gene67246 | 0.848449 | 6.08E-60 | -1.69E-46 |
| MS.gene051983 | MS.gene67246 | 0.820761 | 5.78E-53 | -1.69E-46 |
| MS.gene052011 | MS.gene67246 | -0.838166 | 3.38E-57 | -1.69E-46 |
| MS.gene052077 | MS.gene67246 | 0.82098 | 5.15E-53 | -1.69E-46 |
| MS.gene052135 | MS.gene67246 | 0.809438 | 1.89E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene67246 | 0.808749 | 2.66E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene67246 | 0.813826 | 2.10E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene67246 | 0.830045 | 3.66E-55 | -1.69E-46 |
| MS.gene053330 | MS.gene67246 | 0.813888 | 2.04E-51 | -1.69E-46 |
| MS.gene053494 | MS.gene67246 | 0.801479 | 8.83E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene67246 | 0.802969 | 4.36E-49 | -1.69E-46 |
| MS.gene053928 | MS.gene67246 | 0.803702 | 3.07E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene67246 | 0.845832 | 3.17E-59 | -1.69E-46 |
| MS.gene054556 | MS.gene67246 | 0.805003 | 1.65E-49 | -1.69E-46 |
| MS.gene054719 | MS.gene67246 | 0.804927 | 1.71E-49 | -1.69E-46 |
| MS.gene054920 | MS.gene67246 | 0.800912 | 1.15E-48 | -1.69E-46 |
| MS.gene054930 | MS.gene67246 | 0.801055 | 1.08E-48 | -1.69E-46 |
| MS.gene055116 | MS.gene67246 | 0.800935 | 1.14E-48 | -1.69E-46 |
| MS.gene055369 | MS.gene67246 | 0.843849 | 1.09E-58 | -1.69E-46 |
| MS.gene05553 | MS.gene67246 | 0.890734 | 7.54E-74 | -1.69E-46 |
| MS.gene056407 | MS.gene67246 | 0.811114 | 8.23E-51 | -1.69E-46 |
| MS.gene056514 | MS.gene67246 | 0.801067 | 1.07E-48 | -1.69E-46 |
| MS.gene056659 | MS.gene67246 | 0.808061 | 3.73E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene67246 | 0.865614 | 5.20E-65 | -1.69E-46 |
| MS.gene056979 | MS.gene67246 | 0.814646 | 1.39E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene67246 | 0.80742 | 5.10E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene67246 | 0.8288 | 7.35E-55 | -1.69E-46 |
| MS.gene057448 | MS.gene67246 | 0.802742 | 4.86E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene67246 | 0.80374 | 3.02E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene67246 | 0.81625 | 6.09E-52 | -1.69E-46 |
| MS.gene058007 | MS.gene67246 | 0.802807 | 4.71E-49 | -1.69E-46 |
| MS.gene058142 | MS.gene67246 | 0.842252 | 2.90E-58 | -1.69E-46 |
| MS.gene058700 | MS.gene67246 | 0.828707 | 7.74E-55 | -1.69E-46 |
| MS.gene05886 | MS.gene67246 | 0.801397 | 9.18E-49 | -1.69E-46 |
| MS.gene059011 | MS.gene67246 | 0.823871 | 1.10E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene67246 | 0.806944 | 6.43E-50 | -1.69E-46 |
| MS.gene059082 | MS.gene67246 | 0.811577 | 6.53E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene67246 | 0.846243 | 2.45E-59 | -1.69E-46 |
| MS.gene059462 | MS.gene67246 | 0.822709 | 2.05E-53 | -1.69E-46 |
| MS.gene059868 | MS.gene67246 | 0.821701 | 3.51E-53 | -1.69E-46 |
| MS.gene059958 | MS.gene67246 | 0.822647 | 2.12E-53 | -1.69E-46 |
| MS.gene060247 | MS.gene67246 | 0.836644 | 8.29E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene67246 | 0.815849 | 7.49E-52 | -1.69E-46 |
| MS.gene061114 | MS.gene67246 | -0.802273 | 6.07E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene67246 | 0.804864 | 1.76E-49 | -1.69E-46 |
| MS.gene061159 | MS.gene67246 | 0.851078 | 1.12E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67246.t1 | MTR_5g074130 | 90.547 | 677 | 63 | 1 | 1 | 676 | 1 | 677 | 0.0 | 1263 |
| MS.gene67246.t1 | MTR_5g073920 | 55.310 | 678 | 275 | 7 | 3 | 673 | 2 | 658 | 0.0 | 726 |
| MS.gene67246.t1 | MTR_3g464010 | 50.578 | 692 | 301 | 10 | 3 | 676 | 2 | 670 | 0.0 | 654 |
| MS.gene67246.t1 | MTR_5g093530 | 82.254 | 355 | 40 | 1 | 323 | 677 | 244 | 575 | 0.0 | 604 |
| MS.gene67246.t1 | MTR_5g093530 | 87.109 | 256 | 32 | 1 | 1 | 255 | 1 | 256 | 6.46e-150 | 447 |
| MS.gene67246.t1 | MTR_5g073460 | 48.637 | 697 | 323 | 13 | 3 | 672 | 2 | 690 | 0.0 | 595 |
| MS.gene67246.t1 | MTR_5g073480 | 52.158 | 533 | 226 | 12 | 9 | 516 | 6 | 534 | 9.23e-171 | 502 |
| MS.gene67246.t1 | MTR_5g073620 | 45.249 | 663 | 281 | 15 | 9 | 624 | 6 | 633 | 8.39e-169 | 511 |
| MS.gene67246.t1 | MTR_5g073620 | 37.870 | 338 | 181 | 7 | 342 | 673 | 753 | 1067 | 4.76e-56 | 206 |
| MS.gene67246.t1 | MTR_5g073960 | 52.927 | 427 | 184 | 6 | 3 | 424 | 2 | 416 | 6.93e-137 | 408 |
| MS.gene67246.t1 | MTR_5g073450 | 47.045 | 440 | 211 | 9 | 248 | 672 | 199 | 631 | 7.09e-115 | 359 |
| MS.gene67246.t1 | MTR_5g073810 | 44.009 | 459 | 186 | 9 | 5 | 434 | 4 | 420 | 8.49e-106 | 328 |
| MS.gene67246.t1 | MTR_3g031130 | 45.721 | 444 | 209 | 11 | 247 | 672 | 188 | 617 | 1.09e-102 | 327 |
| MS.gene67246.t1 | MTR_5g073770 | 42.263 | 433 | 174 | 12 | 9 | 424 | 6 | 379 | 7.50e-86 | 275 |
| MS.gene67246.t1 | MTR_5g073610 | 48.318 | 327 | 142 | 8 | 10 | 326 | 7 | 316 | 2.01e-85 | 272 |
| MS.gene67246.t1 | MTR_5g073880 | 55.678 | 273 | 94 | 6 | 1 | 268 | 1 | 251 | 5.10e-84 | 266 |
| MS.gene67246.t1 | MTR_5g074450 | 60.163 | 246 | 74 | 6 | 7 | 228 | 6 | 251 | 1.48e-82 | 271 |
| MS.gene67246.t1 | MTR_5g073750 | 51.087 | 276 | 128 | 4 | 10 | 278 | 7 | 282 | 3.99e-82 | 261 |
| MS.gene67246.t1 | MTR_5g073470 | 43.614 | 321 | 121 | 6 | 5 | 320 | 4 | 269 | 4.96e-73 | 237 |
| MS.gene67246.t1 | MTR_5g074190 | 70.520 | 173 | 47 | 2 | 5 | 176 | 1 | 170 | 5.03e-71 | 239 |
| MS.gene67246.t1 | MTR_5g074190 | 29.897 | 291 | 139 | 6 | 386 | 675 | 184 | 410 | 8.59e-28 | 118 |
| MS.gene67246.t1 | MTR_5g073900 | 39.687 | 383 | 193 | 10 | 268 | 648 | 1 | 347 | 1.97e-69 | 230 |
| MS.gene67246.t1 | MTR_5g073840 | 54.808 | 208 | 88 | 3 | 4 | 205 | 3 | 210 | 9.47e-68 | 223 |
| MS.gene67246.t1 | MTR_5g073820 | 33.272 | 544 | 187 | 16 | 12 | 521 | 30 | 431 | 6.89e-64 | 219 |
| MS.gene67246.t1 | MTR_7g026630 | 31.897 | 464 | 279 | 11 | 232 | 672 | 199 | 648 | 2.78e-60 | 214 |
| MS.gene67246.t1 | MTR_5g073780 | 45.339 | 236 | 115 | 3 | 438 | 673 | 1 | 222 | 2.97e-60 | 202 |
| MS.gene67246.t1 | MTR_1g090620 | 29.870 | 462 | 291 | 9 | 232 | 672 | 190 | 639 | 8.71e-60 | 213 |
| MS.gene67246.t1 | MTR_5g073650 | 38.764 | 356 | 149 | 7 | 106 | 434 | 5 | 318 | 3.88e-59 | 202 |
| MS.gene67246.t1 | MTR_5g074150 | 64.331 | 157 | 55 | 1 | 14 | 169 | 24 | 180 | 4.71e-59 | 199 |
| MS.gene67246.t1 | MTR_5g074090 | 60.127 | 158 | 61 | 1 | 14 | 169 | 13 | 170 | 9.82e-58 | 196 |
| MS.gene67246.t1 | MTR_1g057560 | 31.090 | 431 | 277 | 8 | 253 | 672 | 202 | 623 | 9.44e-56 | 201 |
| MS.gene67246.t1 | MTR_8g021330 | 28.795 | 448 | 289 | 10 | 250 | 672 | 161 | 603 | 9.15e-54 | 195 |
| MS.gene67246.t1 | MTR_4g103540 | 29.797 | 443 | 289 | 9 | 245 | 672 | 243 | 678 | 3.76e-51 | 189 |
| MS.gene67246.t1 | MTR_5g073860 | 48.205 | 195 | 92 | 2 | 4 | 192 | 17 | 208 | 3.95e-50 | 179 |
| MS.gene67246.t1 | MTR_5g074200 | 50.526 | 190 | 93 | 1 | 5 | 193 | 1 | 190 | 1.73e-49 | 176 |
| MS.gene67246.t1 | MTR_6g033310 | 30.045 | 446 | 273 | 10 | 256 | 672 | 288 | 723 | 3.37e-48 | 181 |
| MS.gene67246.t1 | MTR_5g073660 | 41.111 | 270 | 89 | 6 | 12 | 251 | 30 | 259 | 1.95e-47 | 169 |
| MS.gene67246.t1 | MTR_7g013770 | 26.949 | 449 | 294 | 10 | 249 | 672 | 225 | 664 | 4.17e-43 | 166 |
| MS.gene67246.t1 | MTR_5g074070 | 43.627 | 204 | 79 | 5 | 4 | 204 | 3 | 173 | 2.70e-41 | 151 |
| MS.gene67246.t1 | MTR_1g117090 | 26.652 | 469 | 278 | 11 | 261 | 673 | 209 | 667 | 7.52e-40 | 156 |
| MS.gene67246.t1 | MTR_1g067480 | 23.947 | 451 | 299 | 11 | 250 | 672 | 166 | 600 | 1.27e-34 | 140 |
| MS.gene67246.t1 | MTR_3g025900 | 26.256 | 438 | 296 | 9 | 250 | 672 | 181 | 606 | 1.41e-34 | 140 |
| MS.gene67246.t1 | MTR_5g073500 | 48.366 | 153 | 49 | 2 | 14 | 166 | 1 | 123 | 1.97e-34 | 127 |
| MS.gene67246.t1 | MTR_6g078770 | 40.816 | 196 | 113 | 3 | 19 | 211 | 109 | 304 | 2.66e-34 | 134 |
| MS.gene67246.t1 | MTR_1g067460 | 24.672 | 458 | 292 | 14 | 250 | 674 | 164 | 601 | 6.88e-34 | 137 |
| MS.gene67246.t1 | MTR_2g096230 | 21.973 | 446 | 312 | 8 | 245 | 672 | 152 | 579 | 2.14e-33 | 136 |
| MS.gene67246.t1 | MTR_4g062330 | 24.091 | 440 | 288 | 10 | 261 | 672 | 181 | 602 | 1.37e-32 | 134 |
| MS.gene67246.t1 | MTR_6g078610 | 43.678 | 174 | 96 | 2 | 18 | 189 | 593 | 766 | 6.02e-32 | 133 |
| MS.gene67246.t1 | MTR_5g093540 | 44.156 | 154 | 61 | 2 | 5 | 158 | 1 | 129 | 2.89e-28 | 114 |
| MS.gene67246.t1 | MTR_6g075870 | 39.429 | 175 | 102 | 4 | 1 | 172 | 596 | 769 | 7.77e-27 | 117 |
| MS.gene67246.t1 | MTR_4g019260 | 71.667 | 60 | 17 | 0 | 331 | 390 | 10 | 69 | 4.15e-23 | 93.6 |
| MS.gene67246.t1 | MTR_4g023690 | 56.250 | 80 | 33 | 2 | 63 | 141 | 8 | 86 | 9.11e-21 | 87.4 |
| MS.gene67246.t1 | MTR_5g073490 | 37.342 | 158 | 80 | 4 | 516 | 671 | 11 | 151 | 3.45e-20 | 88.2 |
| MS.gene67246.t1 | MTR_4g008260 | 23.698 | 384 | 257 | 12 | 308 | 672 | 273 | 639 | 4.18e-20 | 95.5 |
| MS.gene67246.t1 | MTR_1g009620 | 20.833 | 480 | 352 | 10 | 206 | 672 | 187 | 651 | 3.92e-19 | 92.4 |
| MS.gene67246.t1 | MTR_6g078770 | 31.633 | 196 | 100 | 4 | 19 | 211 | 109 | 273 | 3.22e-18 | 86.7 |
| MS.gene67246.t1 | MTR_6g078620 | 32.955 | 176 | 88 | 3 | 6 | 180 | 79 | 225 | 1.94e-17 | 82.4 |
| MS.gene67246.t1 | MTR_5g073830 | 52.500 | 80 | 37 | 1 | 8 | 86 | 7 | 86 | 1.26e-16 | 79.7 |
| MS.gene67246.t1 | MTR_5g073850 | 37.589 | 141 | 73 | 2 | 85 | 225 | 14 | 139 | 3.92e-14 | 71.2 |
| MS.gene67246.t1 | MTR_0229s0040 | 24.419 | 172 | 128 | 1 | 499 | 668 | 31 | 202 | 1.75e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67246.t1 | AT5G58430 | 45.354 | 452 | 223 | 12 | 234 | 672 | 176 | 616 | 3.31e-104 | 330 |
| MS.gene67246.t1 | AT1G07000 | 36.735 | 441 | 251 | 12 | 248 | 677 | 176 | 599 | 4.04e-70 | 239 |
| MS.gene67246.t1 | AT5G50380 | 31.011 | 445 | 285 | 10 | 245 | 672 | 230 | 669 | 4.11e-58 | 208 |
| MS.gene67246.t1 | AT5G03540 | 30.115 | 435 | 281 | 8 | 253 | 672 | 87 | 513 | 6.73e-55 | 196 |
| MS.gene67246.t1 | AT5G03540 | 30.115 | 435 | 281 | 8 | 253 | 672 | 202 | 628 | 5.03e-54 | 196 |
| MS.gene67246.t1 | AT5G52340 | 29.561 | 433 | 279 | 10 | 253 | 672 | 202 | 621 | 5.40e-54 | 196 |
| MS.gene67246.t1 | AT5G03540 | 30.115 | 435 | 281 | 8 | 253 | 672 | 228 | 654 | 8.56e-54 | 196 |
| MS.gene67246.t1 | AT1G72470 | 31.320 | 447 | 278 | 11 | 250 | 672 | 178 | 619 | 8.87e-54 | 196 |
| MS.gene67246.t1 | AT1G54090 | 29.754 | 447 | 283 | 11 | 250 | 672 | 170 | 609 | 3.54e-52 | 191 |
| MS.gene67246.t1 | AT5G13150 | 30.425 | 447 | 269 | 12 | 255 | 672 | 209 | 642 | 2.17e-51 | 189 |
| MS.gene67246.t1 | AT3G14090 | 29.062 | 437 | 284 | 11 | 250 | 665 | 173 | 604 | 1.33e-50 | 186 |
| MS.gene67246.t1 | AT5G13990 | 27.510 | 498 | 321 | 15 | 189 | 672 | 208 | 679 | 1.39e-43 | 167 |
| MS.gene67246.t1 | AT5G52350 | 27.674 | 430 | 291 | 10 | 253 | 672 | 156 | 575 | 1.06e-41 | 160 |
| MS.gene67246.t1 | AT2G39380 | 25.107 | 466 | 317 | 10 | 229 | 672 | 153 | 608 | 4.27e-38 | 150 |
| MS.gene67246.t1 | AT3G29400 | 25.647 | 464 | 295 | 10 | 247 | 672 | 194 | 645 | 1.10e-37 | 149 |
| MS.gene67246.t1 | AT5G61010 | 25.843 | 445 | 282 | 11 | 251 | 672 | 205 | 624 | 1.27e-34 | 140 |
| MS.gene67246.t1 | AT5G61010 | 25.843 | 445 | 282 | 11 | 251 | 672 | 205 | 624 | 1.27e-34 | 140 |
| MS.gene67246.t1 | AT3G55150 | 26.651 | 439 | 286 | 10 | 257 | 672 | 183 | 608 | 1.50e-34 | 140 |
| MS.gene67246.t1 | AT2G28640 | 25.909 | 440 | 287 | 11 | 256 | 673 | 155 | 577 | 3.31e-34 | 138 |
| MS.gene67246.t1 | AT1G07725 | 25.743 | 404 | 266 | 8 | 256 | 641 | 175 | 562 | 1.50e-32 | 134 |
| MS.gene67246.t1 | AT3G09530 | 24.169 | 451 | 309 | 11 | 248 | 672 | 157 | 600 | 1.39e-31 | 131 |
| MS.gene67246.t1 | AT3G09520 | 23.736 | 455 | 305 | 13 | 248 | 672 | 162 | 604 | 6.00e-31 | 129 |
| MS.gene67246.t1 | AT5G59730 | 24.499 | 449 | 290 | 14 | 256 | 672 | 165 | 596 | 6.00e-29 | 122 |
| MS.gene67246.t1 | AT5G59730 | 24.499 | 449 | 290 | 14 | 256 | 672 | 165 | 596 | 1.12e-28 | 122 |
| MS.gene67246.t1 | AT4G31540 | 23.936 | 376 | 252 | 10 | 319 | 673 | 293 | 655 | 6.21e-22 | 101 |
| MS.gene67246.t1 | AT2G28650 | 24.682 | 393 | 269 | 10 | 265 | 646 | 156 | 532 | 6.40e-21 | 97.8 |
| MS.gene67246.t1 | AT1G51640 | 23.563 | 348 | 239 | 8 | 319 | 645 | 253 | 594 | 7.14e-15 | 79.0 |
Find 105 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGTATATGGAATCTTTAT+TGG | 0.197903 | 5.1:-56942358 | MS.gene67246:CDS |
| TTGCTTCTCCTAATCTGTTT+TGG | 0.232404 | 5.1:+56943016 | None:intergenic |
| TTTAATTAAAAGGTGGGATT+TGG | 0.239403 | 5.1:-56942665 | MS.gene67246:CDS |
| TGGGATTTGGAAACCATATT+TGG | 0.243371 | 5.1:-56942652 | MS.gene67246:CDS |
| AAGTTGCAGTTATTCATTAT+TGG | 0.254047 | 5.1:-56943810 | MS.gene67246:CDS |
| AATACCTTGCTGCCAGTATA+TGG | 0.291063 | 5.1:-56942370 | MS.gene67246:CDS |
| GAACCAATCGTTGCCAAATA+TGG | 0.292106 | 5.1:+56942639 | None:intergenic |
| TGCAAGGTCTCTGTAGTCTT+TGG | 0.314854 | 5.1:+56942732 | None:intergenic |
| TGTCTAATCAATAGATTATT+CGG | 0.316039 | 5.1:-56943390 | MS.gene67246:CDS |
| ACATAGAAGATTTAATTAAA+AGG | 0.323041 | 5.1:-56942675 | MS.gene67246:CDS |
| CCACTTGGGTGCTGATTCTT+CGG | 0.339621 | 5.1:-56943061 | MS.gene67246:CDS |
| ACAACAGATGAAATGGATAA+TGG | 0.343765 | 5.1:-56942785 | MS.gene67246:CDS |
| TGCTTCAGCTGCTGTTGGAC+TGG | 0.347370 | 5.1:-56944192 | MS.gene67246:CDS |
| GACTCTGATTTGATGTTGCC+TGG | 0.369550 | 5.1:-56943552 | MS.gene67246:CDS |
| TGAATTCCAAGATGAAAATT+CGG | 0.373996 | 5.1:-56943718 | MS.gene67246:CDS |
| GCTAATCAGTATATTAGATA+TGG | 0.374693 | 5.1:-56942307 | MS.gene67246:CDS |
| TATAAAGATCAAGATCTTGT+TGG | 0.377972 | 5.1:+56942596 | None:intergenic |
| CGAGCAACTTTCTTTGCTGC+TGG | 0.378507 | 5.1:+56942949 | None:intergenic |
| TGAAGGGAGTTGATCAAATC+TGG | 0.381983 | 5.1:+56943501 | None:intergenic |
| GAATATCCCAAGGTGAATAA+TGG | 0.388220 | 5.1:-56942832 | MS.gene67246:CDS |
| CCAATAAAGATTCCATATAC+TGG | 0.390848 | 5.1:+56942358 | None:intergenic |
| GATAATTTAGTTTCAAGAAA+AGG | 0.391899 | 5.1:+56942986 | None:intergenic |
| GAGTTTGTCGCGGAAATCTC+AGG | 0.392478 | 5.1:-56943898 | MS.gene67246:CDS |
| TCATGAAACCGCGAAGTTCA+TGG | 0.399822 | 5.1:-56943481 | MS.gene67246:CDS |
| ACAGATTAGGAGAAGCAATC+AGG | 0.400494 | 5.1:-56943011 | MS.gene67246:CDS |
| AACTCATCGATCATGATGTT+AGG | 0.400629 | 5.1:+56943528 | None:intergenic |
| TGTATATGATAAGAAGCTTA+AGG | 0.401177 | 5.1:-56942416 | MS.gene67246:CDS |
| CTGATGGAAGCCCTTCCATT+TGG | 0.406441 | 5.1:-56943140 | MS.gene67246:CDS |
| TGTACAGAGTTCAGTCGAAT+TGG | 0.407634 | 5.1:-56942441 | MS.gene67246:CDS |
| GTTTCTGATCGAAAGCAGTT+AGG | 0.430631 | 5.1:-56942251 | None:intergenic |
| CTTTCTTTGCTGCTGGGACT+CGG | 0.433860 | 5.1:+56942956 | None:intergenic |
| GGATTTGCTTCAGCTGCTGT+TGG | 0.441246 | 5.1:-56944197 | MS.gene67246:CDS |
| CATGGTAAGTGCTGGGTTTG+AGG | 0.442877 | 5.1:-56943463 | MS.gene67246:CDS |
| CAGTTATTCATTATTGGAGC+AGG | 0.449950 | 5.1:-56943804 | MS.gene67246:CDS |
| AGAAGATTTAATTAAAAGGT+GGG | 0.450847 | 5.1:-56942671 | MS.gene67246:CDS |
| ACTACTCCATTATTCACCTT+GGG | 0.459128 | 5.1:+56942826 | None:intergenic |
| TCACAGAGTCGTCGTTCAAA+TGG | 0.466025 | 5.1:+56943261 | None:intergenic |
| GTTACAGTCCAAAACAGATT+AGG | 0.467068 | 5.1:-56943024 | MS.gene67246:CDS |
| AATTTCTTCTACAGAAGAAA+AGG | 0.469100 | 5.1:+56943749 | None:intergenic |
| CAGAAGATATATTGAAAGAA+AGG | 0.469105 | 5.1:-56942495 | MS.gene67246:CDS |
| CCATTGCAGAAGGAAATGTT+TGG | 0.471945 | 5.1:-56943418 | MS.gene67246:CDS |
| GCGAAGTTCATGGTAAGTGC+TGG | 0.476769 | 5.1:-56943471 | MS.gene67246:CDS |
| GAAATGGATAATGGATATGT+TGG | 0.480453 | 5.1:-56942776 | MS.gene67246:CDS |
| GAGCAACTTTCTTTGCTGCT+GGG | 0.482217 | 5.1:+56942950 | None:intergenic |
| AAGCGACGTAGCTAATGATC+TGG | 0.484649 | 5.1:+56942896 | None:intergenic |
| CCAAACATTTCCTTCTGCAA+TGG | 0.491403 | 5.1:+56943418 | None:intergenic |
| TTGAATAAACACCAAATGGA+AGG | 0.492557 | 5.1:+56943129 | None:intergenic |
| GAAATGAGGCTATATGCATC+TGG | 0.496530 | 5.1:+56943948 | None:intergenic |
| AAACCATATTTGGCAACGAT+TGG | 0.497405 | 5.1:-56942642 | MS.gene67246:CDS |
| GGAAGGTTCCGTGATTGTCT+TGG | 0.497714 | 5.1:-56942337 | MS.gene67246:CDS |
| CTAATGATCTGGACCACCAT+TGG | 0.498577 | 5.1:+56942907 | None:intergenic |
| TATATGGAATCTTTATTGGA+AGG | 0.500016 | 5.1:-56942354 | MS.gene67246:CDS |
| ACGAAGGTATGGAGATTTGT+CGG | 0.506373 | 5.1:-56944218 | MS.gene67246:CDS |
| TTCGCTGATGCAGTTGCTGA+TGG | 0.507020 | 5.1:-56943156 | MS.gene67246:CDS |
| TACTACTCCATTATTCACCT+TGG | 0.508435 | 5.1:+56942825 | None:intergenic |
| GGCTGATGCAGACGAAGGTA+TGG | 0.509287 | 5.1:-56944229 | MS.gene67246:CDS |
| AAGAAAGTTGCTCGGTCTGA+TGG | 0.517438 | 5.1:-56942940 | MS.gene67246:CDS |
| ACTCATCGATCATGATGTTA+GGG | 0.526299 | 5.1:+56943529 | None:intergenic |
| CGAAGTTCATGGTAAGTGCT+GGG | 0.535756 | 5.1:-56943470 | MS.gene67246:CDS |
| GGAAACAGTCTAGAAGTCTT+CGG | 0.536286 | 5.1:-56944049 | MS.gene67246:CDS |
| CAGATTAGGAGAAGCAATCA+GGG | 0.537526 | 5.1:-56943010 | MS.gene67246:CDS |
| GGGTGCTGATTCTTCGGTGA+AGG | 0.537582 | 5.1:-56943055 | MS.gene67246:CDS |
| GAACTTCGCGGTTTCATGAA+GGG | 0.539523 | 5.1:+56943485 | None:intergenic |
| TGAACTTCGCGGTTTCATGA+AGG | 0.542330 | 5.1:+56943484 | None:intergenic |
| ACATCGGGAATGAAAATCAA+AGG | 0.543866 | 5.1:-56943353 | MS.gene67246:CDS |
| TGAATAAACACCAAATGGAA+GGG | 0.545094 | 5.1:+56943130 | None:intergenic |
| TAGAAGATTTAATTAAAAGG+TGG | 0.546097 | 5.1:-56942672 | MS.gene67246:CDS |
| TCGATCATGATGTTAGGGCC+AGG | 0.553016 | 5.1:+56943534 | None:intergenic |
| TTGCAGAAGGAAATGTTTGG+AGG | 0.555339 | 5.1:-56943415 | MS.gene67246:CDS |
| CAAAGGCAGCACAAGAAATG+AGG | 0.556020 | 5.1:+56943934 | None:intergenic |
| CGATCAGAAACAAATTGTTG+AGG | 0.556368 | 5.1:+56942263 | None:intergenic |
| GATTGCAGAAGATTAACATC+GGG | 0.561302 | 5.1:-56943368 | MS.gene67246:CDS |
| GCTACGTCGCTTCTGCATGT+AGG | 0.571994 | 5.1:-56942885 | MS.gene67246:CDS |
| CATCGGGAATGAAAATCAAA+GGG | 0.583551 | 5.1:-56943352 | MS.gene67246:CDS |
| AGCACTTACCATGAACTTCG+CGG | 0.585018 | 5.1:+56943473 | None:intergenic |
| ATGTATACATCCATTGCAGA+AGG | 0.591121 | 5.1:-56943428 | MS.gene67246:CDS |
| GGAAGAAATAATAATATCAG+TGG | 0.606646 | 5.1:-56942395 | MS.gene67246:CDS |
| TTGATATCGAAATTCCACTT+GGG | 0.612668 | 5.1:-56943075 | MS.gene67246:CDS |
| TTTGATATCGAAATTCCACT+TGG | 0.613822 | 5.1:-56943076 | MS.gene67246:CDS |
| AAACAACGAGTAGCAGAGGA+GGG | 0.616280 | 5.1:+56943219 | None:intergenic |
| ATCTCAGGGTGGATTCGAAG+TGG | 0.619524 | 5.1:-56943883 | MS.gene67246:CDS |
| CAGCAGCAAAGAAAGTTGCT+CGG | 0.622781 | 5.1:-56942948 | MS.gene67246:CDS |
| AGTTTGTCGCGGAAATCTCA+GGG | 0.626165 | 5.1:-56943897 | MS.gene67246:CDS |
| TGATGGTCGACATCATCCAA+TGG | 0.628831 | 5.1:-56942923 | MS.gene67246:CDS |
| CATGAATACCAAGACAATCA+CGG | 0.629179 | 5.1:+56942329 | None:intergenic |
| CCGAAGAATCAGCACCCAAG+TGG | 0.635114 | 5.1:+56943061 | None:intergenic |
| GATTCCATATACTGGCAGCA+AGG | 0.639874 | 5.1:+56942366 | None:intergenic |
| TCAGCCATGTCTGAATTCTG+AGG | 0.645050 | 5.1:+56944246 | None:intergenic |
| GAAACAACGAGTAGCAGAGG+AGG | 0.648023 | 5.1:+56943218 | None:intergenic |
| GGATTGCAGAAGATTAACAT+CGG | 0.649736 | 5.1:-56943369 | MS.gene67246:CDS |
| TGTGAAACAACGAGTAGCAG+AGG | 0.656858 | 5.1:+56943215 | None:intergenic |
| TGCTACTCGTTGTTTCACAG+AGG | 0.669048 | 5.1:-56943211 | MS.gene67246:CDS |
| GACATGGCTGATGCAGACGA+AGG | 0.670723 | 5.1:-56944234 | MS.gene67246:CDS |
| GAAGCTGAAACGTTGCTCCG+TGG | 0.670987 | 5.1:+56943184 | None:intergenic |
| GCAAAACTTGTTCTAGCGTG+CGG | 0.672133 | 5.1:+56942857 | None:intergenic |
| ACTCAGTGACATGATAGCAA+AGG | 0.674248 | 5.1:+56943917 | None:intergenic |
| TCATGTCACTGAGTTTGTCG+CGG | 0.675556 | 5.1:-56943908 | MS.gene67246:CDS |
| AACAACGAGTAGCAGAGGAG+GGG | 0.675729 | 5.1:+56943220 | None:intergenic |
| TGGTCGACATCATCCAATGG+TGG | 0.692831 | 5.1:-56942920 | MS.gene67246:CDS |
| AGGGAGTTGATCAAATCTGG+AGG | 0.695828 | 5.1:+56943504 | None:intergenic |
| GAAGTAAAACGAATAGACAG+AGG | 0.696789 | 5.1:+56943989 | None:intergenic |
| TATAAGGAAGAACATGACAG+TGG | 0.703912 | 5.1:-56944276 | None:intergenic |
| TGTTCCTCAGAATTCAGACA+TGG | 0.707083 | 5.1:-56944250 | MS.gene67246:CDS |
| GTTGGACAACAATGACTATG+CGG | 0.730761 | 5.1:-56942536 | MS.gene67246:CDS |
| TTGTCGCGGAAATCTCAGGG+TGG | 0.756035 | 5.1:-56943894 | MS.gene67246:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATAGAAGATTTAATTAAA+AGG | - | chr5.1:56943840-56943859 | MS.gene67246:CDS | 15.0% |
| !! | ATCTTTATATAAAAAAAACG+TGG | - | chr5.1:56943933-56943952 | MS.gene67246:CDS | 15.0% |
| !! | TAGATATTGTGATTAAAAAA+TGG | - | chr5.1:56943195-56943214 | MS.gene67246:CDS | 15.0% |
| !!! | ATTTTTTCATGATGAATAAT+AGG | - | chr5.1:56943813-56943832 | MS.gene67246:CDS | 15.0% |
| !!! | TGATTTTGTATGAAAATATA+TGG | - | chr5.1:56942445-56942464 | MS.gene67246:CDS | 15.0% |
| !! | AGAAGATTTAATTAAAAGGT+GGG | - | chr5.1:56943844-56943863 | MS.gene67246:CDS | 20.0% |
| !! | TAGAAGATTTAATTAAAAGG+TGG | - | chr5.1:56943843-56943862 | MS.gene67246:CDS | 20.0% |
| !! | TATAAAAAAAACGTGGAATA+TGG | - | chr5.1:56943940-56943959 | MS.gene67246:CDS | 20.0% |
| !! | TGTCTAATCAATAGATTATT+CGG | - | chr5.1:56943125-56943144 | MS.gene67246:CDS | 20.0% |
| !!! | GATAATTTAGTTTCAAGAAA+AGG | + | chr5.1:56943532-56943551 | None:intergenic | 20.0% |
| ! | AAGTTGCAGTTATTCATTAT+TGG | - | chr5.1:56942705-56942724 | MS.gene67246:CDS | 25.0% |
| ! | AATTTCTTCTACAGAAGAAA+AGG | + | chr5.1:56942769-56942788 | None:intergenic | 25.0% |
| ! | ATGTTGGAGAAAAAATTGAA+TGG | - | chr5.1:56943755-56943774 | MS.gene67246:CDS | 25.0% |
| ! | CAGAAGATATATTGAAAGAA+AGG | - | chr5.1:56944020-56944039 | MS.gene67246:CDS | 25.0% |
| ! | GCTAATCAGTATATTAGATA+TGG | - | chr5.1:56944208-56944227 | MS.gene67246:CDS | 25.0% |
| ! | GGAAGAAATAATAATATCAG+TGG | - | chr5.1:56944120-56944139 | MS.gene67246:CDS | 25.0% |
| ! | GGAAGAATGAAAAATGATAA+CGG | + | chr5.1:56942748-56942767 | None:intergenic | 25.0% |
| ! | TATAAAGATCAAGATCTTGT+TGG | + | chr5.1:56943922-56943941 | None:intergenic | 25.0% |
| ! | TATATGGAATCTTTATTGGA+AGG | - | chr5.1:56944161-56944180 | MS.gene67246:CDS | 25.0% |
| ! | TGAATTCCAAGATGAAAATT+CGG | - | chr5.1:56942797-56942816 | MS.gene67246:CDS | 25.0% |
| ! | TGTATATGATAAGAAGCTTA+AGG | - | chr5.1:56944099-56944118 | MS.gene67246:CDS | 25.0% |
| ! | TTTAATTAAAAGGTGGGATT+TGG | - | chr5.1:56943850-56943869 | MS.gene67246:CDS | 25.0% |
| !! | CATTTTGAATAAACACCAAA+TGG | + | chr5.1:56943393-56943412 | None:intergenic | 25.0% |
| !! | CTTTTATACAACAGATGAAA+TGG | - | chr5.1:56943723-56943742 | MS.gene67246:CDS | 25.0% |
| !! | TAATTACCGAATTTTCATCT+TGG | + | chr5.1:56942806-56942825 | None:intergenic | 25.0% |
| !! | TTTTACTTCGATAAAGTGAA+CGG | - | chr5.1:56942540-56942559 | MS.gene67246:CDS | 25.0% |
| !! | TTTTCATGATGAATAATAGG+AGG | - | chr5.1:56943816-56943835 | MS.gene67246:CDS | 25.0% |
| !! | TTTTCTTCTGTAGAAGAAAT+TGG | - | chr5.1:56942768-56942787 | MS.gene67246:CDS | 25.0% |
| !!! | GATCTTCTTTACTTTTTTCT+CGG | - | chr5.1:56942654-56942673 | MS.gene67246:CDS | 25.0% |
| ACAACAGATGAAATGGATAA+TGG | - | chr5.1:56943730-56943749 | MS.gene67246:CDS | 30.0% | |
| ACTACCAAAAAGATAGTTGA+AGG | + | chr5.1:56942370-56942389 | None:intergenic | 30.0% | |
| CCAATAAAGATTCCATATAC+TGG | + | chr5.1:56944160-56944179 | None:intergenic | 30.0% | |
| CCAGTATATGGAATCTTTAT+TGG | - | chr5.1:56944157-56944176 | MS.gene67246:CDS | 30.0% | |
| TGAATAAACACCAAATGGAA+GGG | + | chr5.1:56943388-56943407 | None:intergenic | 30.0% | |
| TTGAATAAACACCAAATGGA+AGG | + | chr5.1:56943389-56943408 | None:intergenic | 30.0% | |
| TTGATATCGAAATTCCACTT+GGG | - | chr5.1:56943440-56943459 | MS.gene67246:CDS | 30.0% | |
| TTTGATATCGAAATTCCACT+TGG | - | chr5.1:56943439-56943458 | MS.gene67246:CDS | 30.0% | |
| ! | GGAATTTTGCTTGATTTTTC+TGG | + | chr5.1:56943901-56943920 | None:intergenic | 30.0% |
| ! | TCTTCCTTCAACTATCTTTT+TGG | - | chr5.1:56942363-56942382 | MS.gene67246:CDS | 30.0% |
| !! | GAAATGGATAATGGATATGT+TGG | - | chr5.1:56943739-56943758 | MS.gene67246:CDS | 30.0% |
| !! | TCAACTATCTTTTTGGTAGT+TGG | - | chr5.1:56942370-56942389 | MS.gene67246:CDS | 30.0% |
| AAACCATATTTGGCAACGAT+TGG | - | chr5.1:56943873-56943892 | MS.gene67246:CDS | 35.0% | |
| AACTCATCGATCATGATGTT+AGG | + | chr5.1:56942990-56943009 | None:intergenic | 35.0% | |
| ACATCGGGAATGAAAATCAA+AGG | - | chr5.1:56943162-56943181 | MS.gene67246:CDS | 35.0% | |
| ACTACTCCATTATTCACCTT+GGG | + | chr5.1:56943692-56943711 | None:intergenic | 35.0% | |
| ACTCATCGATCATGATGTTA+GGG | + | chr5.1:56942989-56943008 | None:intergenic | 35.0% | |
| ATGTATACATCCATTGCAGA+AGG | - | chr5.1:56943087-56943106 | MS.gene67246:CDS | 35.0% | |
| CAGTTATTCATTATTGGAGC+AGG | - | chr5.1:56942711-56942730 | MS.gene67246:CDS | 35.0% | |
| CATCGGGAATGAAAATCAAA+GGG | - | chr5.1:56943163-56943182 | MS.gene67246:CDS | 35.0% | |
| CATGAATACCAAGACAATCA+CGG | + | chr5.1:56944189-56944208 | None:intergenic | 35.0% | |
| CGATCAGAAACAAATTGTTG+AGG | + | chr5.1:56944255-56944274 | None:intergenic | 35.0% | |
| GAAGTAAAACGAATAGACAG+AGG | + | chr5.1:56942529-56942548 | None:intergenic | 35.0% | |
| GAATATCCCAAGGTGAATAA+TGG | - | chr5.1:56943683-56943702 | MS.gene67246:CDS | 35.0% | |
| GATTGCAGAAGATTAACATC+GGG | - | chr5.1:56943147-56943166 | MS.gene67246:CDS | 35.0% | |
| GGATTGCAGAAGATTAACAT+CGG | - | chr5.1:56943146-56943165 | MS.gene67246:CDS | 35.0% | |
| GTTACAGTCCAAAACAGATT+AGG | - | chr5.1:56943491-56943510 | MS.gene67246:CDS | 35.0% | |
| TACTACTCCATTATTCACCT+TGG | + | chr5.1:56943693-56943712 | None:intergenic | 35.0% | |
| TGAAAAAATAGCGCAATGCA+AGG | + | chr5.1:56943802-56943821 | None:intergenic | 35.0% | |
| TGGGATTTGGAAACCATATT+TGG | - | chr5.1:56943863-56943882 | MS.gene67246:CDS | 35.0% | |
| ! | TTGCTTCTCCTAATCTGTTT+TGG | + | chr5.1:56943502-56943521 | None:intergenic | 35.0% |
| !!! | GGTGTTTGAGTTTTTGAAGT+TGG | - | chr5.1:56943961-56943980 | MS.gene67246:CDS | 35.0% |
| AATACCTTGCTGCCAGTATA+TGG | - | chr5.1:56944145-56944164 | MS.gene67246:CDS | 40.0% | |
| ACAGATTAGGAGAAGCAATC+AGG | - | chr5.1:56943504-56943523 | MS.gene67246:CDS | 40.0% | |
| ACTCAGTGACATGATAGCAA+AGG | + | chr5.1:56942601-56942620 | None:intergenic | 40.0% | |
| CAGATTAGGAGAAGCAATCA+GGG | - | chr5.1:56943505-56943524 | MS.gene67246:CDS | 40.0% | |
| CCAAACATTTCCTTCTGCAA+TGG | + | chr5.1:56943100-56943119 | None:intergenic | 40.0% | |
| CCATTGCAGAAGGAAATGTT+TGG | - | chr5.1:56943097-56943116 | MS.gene67246:CDS | 40.0% | |
| GAAATGAGGCTATATGCATC+TGG | + | chr5.1:56942570-56942589 | None:intergenic | 40.0% | |
| GAACCAATCGTTGCCAAATA+TGG | + | chr5.1:56943879-56943898 | None:intergenic | 40.0% | |
| GGAAACAGTCTAGAAGTCTT+CGG | - | chr5.1:56942466-56942485 | MS.gene67246:CDS | 40.0% | |
| GTTGGACAACAATGACTATG+CGG | - | chr5.1:56943979-56943998 | MS.gene67246:CDS | 40.0% | |
| TGTACAGAGTTCAGTCGAAT+TGG | - | chr5.1:56944074-56944093 | MS.gene67246:CDS | 40.0% | |
| TGTTCCTCAGAATTCAGACA+TGG | - | chr5.1:56942265-56942284 | MS.gene67246:CDS | 40.0% | |
| TTGCAGAAGGAAATGTTTGG+AGG | - | chr5.1:56943100-56943119 | MS.gene67246:CDS | 40.0% | |
| ! | ACGAAGGTATGGAGATTTGT+CGG | - | chr5.1:56942297-56942316 | MS.gene67246:CDS | 40.0% |
| ! | AGTTTTGCAGGAATATCCCA+AGG | - | chr5.1:56943673-56943692 | MS.gene67246:CDS | 40.0% |
| ! | CTCTGTGATCATGTCTTTTC+AGG | - | chr5.1:56943269-56943288 | MS.gene67246:CDS | 40.0% |
| ! | TGAAGGGAGTTGATCAAATC+TGG | + | chr5.1:56943017-56943036 | None:intergenic | 40.0% |
| ! | TGTTTCACAGAGGTTTTCCA+CGG | - | chr5.1:56943314-56943333 | MS.gene67246:CDS | 40.0% |
| AAACAACGAGTAGCAGAGGA+GGG | + | chr5.1:56943299-56943318 | None:intergenic | 45.0% | |
| AAGAAAGTTGCTCGGTCTGA+TGG | - | chr5.1:56943575-56943594 | MS.gene67246:CDS | 45.0% | |
| AAGCGACGTAGCTAATGATC+TGG | + | chr5.1:56943622-56943641 | None:intergenic | 45.0% | |
| AGCACTTACCATGAACTTCG+CGG | + | chr5.1:56943045-56943064 | None:intergenic | 45.0% | |
| AGTTTGTCGCGGAAATCTCA+GGG | - | chr5.1:56942618-56942637 | MS.gene67246:CDS | 45.0% | |
| CAAAGGCAGCACAAGAAATG+AGG | + | chr5.1:56942584-56942603 | None:intergenic | 45.0% | |
| CAGCAGCAAAGAAAGTTGCT+CGG | - | chr5.1:56943567-56943586 | MS.gene67246:CDS | 45.0% | |
| CGAAGTTCATGGTAAGTGCT+GGG | - | chr5.1:56943045-56943064 | MS.gene67246:CDS | 45.0% | |
| CTAATGATCTGGACCACCAT+TGG | + | chr5.1:56943611-56943630 | None:intergenic | 45.0% | |
| GAACTTCGCGGTTTCATGAA+GGG | + | chr5.1:56943033-56943052 | None:intergenic | 45.0% | |
| GAGCAACTTTCTTTGCTGCT+GGG | + | chr5.1:56943568-56943587 | None:intergenic | 45.0% | |
| GATTCCATATACTGGCAGCA+AGG | + | chr5.1:56944152-56944171 | None:intergenic | 45.0% | |
| TCACAGAGTCGTCGTTCAAA+TGG | + | chr5.1:56943257-56943276 | None:intergenic | 45.0% | |
| TCAGCCATGTCTGAATTCTG+AGG | + | chr5.1:56942272-56942291 | None:intergenic | 45.0% | |
| TCATGAAACCGCGAAGTTCA+TGG | - | chr5.1:56943034-56943053 | MS.gene67246:CDS | 45.0% | |
| TCATGTCACTGAGTTTGTCG+CGG | - | chr5.1:56942607-56942626 | MS.gene67246:CDS | 45.0% | |
| TGAACTTCGCGGTTTCATGA+AGG | + | chr5.1:56943034-56943053 | None:intergenic | 45.0% | |
| TGATGGTCGACATCATCCAA+TGG | - | chr5.1:56943592-56943611 | MS.gene67246:CDS | 45.0% | |
| TGCAAGGTCTCTGTAGTCTT+TGG | + | chr5.1:56943786-56943805 | None:intergenic | 45.0% | |
| TGTGAAACAACGAGTAGCAG+AGG | + | chr5.1:56943303-56943322 | None:intergenic | 45.0% | |
| ! | AGGGAGTTGATCAAATCTGG+AGG | + | chr5.1:56943014-56943033 | None:intergenic | 45.0% |
| ! | CACGCTAGAACAAGTTTTGC+AGG | - | chr5.1:56943661-56943680 | MS.gene67246:CDS | 45.0% |
| ! | GACTCTGATTTGATGTTGCC+TGG | - | chr5.1:56942963-56942982 | MS.gene67246:CDS | 45.0% |
| ! | GCAAAACTTGTTCTAGCGTG+CGG | + | chr5.1:56943661-56943680 | None:intergenic | 45.0% |
| ! | TGCTACTCGTTGTTTCACAG+AGG | - | chr5.1:56943304-56943323 | MS.gene67246:CDS | 45.0% |
| AACAACGAGTAGCAGAGGAG+GGG | + | chr5.1:56943298-56943317 | None:intergenic | 50.0% | |
| CGAGCAACTTTCTTTGCTGC+TGG | + | chr5.1:56943569-56943588 | None:intergenic | 50.0% | |
| CTGATGGAAGCCCTTCCATT+TGG | - | chr5.1:56943375-56943394 | MS.gene67246:CDS | 50.0% | |
| CTTTCTTTGCTGCTGGGACT+CGG | + | chr5.1:56943562-56943581 | None:intergenic | 50.0% | |
| GAAACAACGAGTAGCAGAGG+AGG | + | chr5.1:56943300-56943319 | None:intergenic | 50.0% | |
| GAGTTTGTCGCGGAAATCTC+AGG | - | chr5.1:56942617-56942636 | MS.gene67246:CDS | 50.0% | |
| GCGAAGTTCATGGTAAGTGC+TGG | - | chr5.1:56943044-56943063 | MS.gene67246:CDS | 50.0% | |
| GGAAGGTTCCGTGATTGTCT+TGG | - | chr5.1:56944178-56944197 | MS.gene67246:CDS | 50.0% | |
| TCGATCATGATGTTAGGGCC+AGG | + | chr5.1:56942984-56943003 | None:intergenic | 50.0% | |
| TGGTCGACATCATCCAATGG+TGG | - | chr5.1:56943595-56943614 | MS.gene67246:CDS | 50.0% | |
| TTCGCTGATGCAGTTGCTGA+TGG | - | chr5.1:56943359-56943378 | MS.gene67246:CDS | 50.0% | |
| ! | ATCTCAGGGTGGATTCGAAG+TGG | - | chr5.1:56942632-56942651 | MS.gene67246:CDS | 50.0% |
| ! | GGATTTGCTTCAGCTGCTGT+TGG | - | chr5.1:56942318-56942337 | MS.gene67246:CDS | 50.0% |
| !! | CATGGTAAGTGCTGGGTTTG+AGG | - | chr5.1:56943052-56943071 | MS.gene67246:CDS | 50.0% |
| !! | CCACTTGGGTGCTGATTCTT+CGG | - | chr5.1:56943454-56943473 | MS.gene67246:CDS | 50.0% |
| CCGAAGAATCAGCACCCAAG+TGG | + | chr5.1:56943457-56943476 | None:intergenic | 55.0% | |
| GAAGCTGAAACGTTGCTCCG+TGG | + | chr5.1:56943334-56943353 | None:intergenic | 55.0% | |
| GACATGGCTGATGCAGACGA+AGG | - | chr5.1:56942281-56942300 | MS.gene67246:CDS | 55.0% | |
| GCTACGTCGCTTCTGCATGT+AGG | - | chr5.1:56943630-56943649 | MS.gene67246:CDS | 55.0% | |
| GGCTGATGCAGACGAAGGTA+TGG | - | chr5.1:56942286-56942305 | MS.gene67246:CDS | 55.0% | |
| TGCTTCAGCTGCTGTTGGAC+TGG | - | chr5.1:56942323-56942342 | MS.gene67246:CDS | 55.0% | |
| TTGTCGCGGAAATCTCAGGG+TGG | - | chr5.1:56942621-56942640 | MS.gene67246:CDS | 55.0% | |
| !! | GGGTGCTGATTCTTCGGTGA+AGG | - | chr5.1:56943460-56943479 | MS.gene67246:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 56942252 | 56944285 | 56942252 | ID=MS.gene67246 |
| chr5.1 | mRNA | 56942252 | 56944285 | 56942252 | ID=MS.gene67246.t1;Parent=MS.gene67246 |
| chr5.1 | exon | 56942252 | 56944285 | 56942252 | ID=MS.gene67246.t1.exon1;Parent=MS.gene67246.t1 |
| chr5.1 | CDS | 56942252 | 56944285 | 56942252 | ID=cds.MS.gene67246.t1;Parent=MS.gene67246.t1 |
| Gene Sequence |
| Protein sequence |
