Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70838.t1 | XP_003617201.1 | 96.5 | 423 | 13 | 1 | 1 | 423 | 1 | 421 | 2.30E-220 | 774.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70838.t1 | P25011 | 53.7 | 454 | 171 | 10 | 1 | 422 | 1 | 447 | 8.3e-110 | 398.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70838.t1 | G7KCT9 | 96.5 | 423 | 13 | 1 | 1 | 423 | 1 | 421 | 1.7e-220 | 774.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049622 | MS.gene70838 | 0.809005 | 2.34E-50 | -1.69E-46 |
| MS.gene04985 | MS.gene70838 | 0.845217 | 4.66E-59 | -1.69E-46 |
| MS.gene049989 | MS.gene70838 | 0.879507 | 1.18E-69 | -1.69E-46 |
| MS.gene050297 | MS.gene70838 | 0.862841 | 3.81E-64 | -1.69E-46 |
| MS.gene050310 | MS.gene70838 | 0.809293 | 2.03E-50 | -1.69E-46 |
| MS.gene050648 | MS.gene70838 | 0.812993 | 3.21E-51 | -1.69E-46 |
| MS.gene051263 | MS.gene70838 | 0.844736 | 6.29E-59 | -1.69E-46 |
| MS.gene051478 | MS.gene70838 | 0.840736 | 7.26E-58 | -1.69E-46 |
| MS.gene051629 | MS.gene70838 | 0.832031 | 1.19E-55 | -1.69E-46 |
| MS.gene051955 | MS.gene70838 | 0.825557 | 4.39E-54 | -1.69E-46 |
| MS.gene052143 | MS.gene70838 | 0.826552 | 2.55E-54 | -1.69E-46 |
| MS.gene052308 | MS.gene70838 | 0.804189 | 2.43E-49 | -1.69E-46 |
| MS.gene052367 | MS.gene70838 | 0.857945 | 1.16E-62 | -1.69E-46 |
| MS.gene053173 | MS.gene70838 | 0.828329 | 9.55E-55 | -1.69E-46 |
| MS.gene053348 | MS.gene70838 | 0.84371 | 1.19E-58 | -1.69E-46 |
| MS.gene053416 | MS.gene70838 | 0.852728 | 3.82E-61 | -1.69E-46 |
| MS.gene053417 | MS.gene70838 | 0.85302 | 3.15E-61 | -1.69E-46 |
| MS.gene054551 | MS.gene70838 | 0.844863 | 5.81E-59 | -1.69E-46 |
| MS.gene054593 | MS.gene70838 | 0.806111 | 9.64E-50 | -1.69E-46 |
| MS.gene054643 | MS.gene70838 | 0.847693 | 9.84E-60 | -1.69E-46 |
| MS.gene055308 | MS.gene70838 | 0.834709 | 2.56E-56 | -1.69E-46 |
| MS.gene055411 | MS.gene70838 | 0.830085 | 3.58E-55 | -1.69E-46 |
| MS.gene055578 | MS.gene70838 | 0.832145 | 1.12E-55 | -1.69E-46 |
| MS.gene055777 | MS.gene70838 | 0.801433 | 9.02E-49 | -1.69E-46 |
| MS.gene055957 | MS.gene70838 | 0.883652 | 3.74E-71 | -1.69E-46 |
| MS.gene056041 | MS.gene70838 | 0.886568 | 3.06E-72 | -1.69E-46 |
| MS.gene056042 | MS.gene70838 | 0.861973 | 7.04E-64 | -1.69E-46 |
| MS.gene056228 | MS.gene70838 | 0.813796 | 2.13E-51 | -1.69E-46 |
| MS.gene056335 | MS.gene70838 | 0.845125 | 4.93E-59 | -1.69E-46 |
| MS.gene05640 | MS.gene70838 | 0.815063 | 1.12E-51 | -1.69E-46 |
| MS.gene056526 | MS.gene70838 | 0.826259 | 2.99E-54 | -1.69E-46 |
| MS.gene057458 | MS.gene70838 | 0.801159 | 1.03E-48 | -1.69E-46 |
| MS.gene057483 | MS.gene70838 | 0.811327 | 7.40E-51 | -1.69E-46 |
| MS.gene058128 | MS.gene70838 | 0.817702 | 2.88E-52 | -1.69E-46 |
| MS.gene058196 | MS.gene70838 | 0.84618 | 2.55E-59 | -1.69E-46 |
| MS.gene058197 | MS.gene70838 | 0.863274 | 2.80E-64 | -1.69E-46 |
| MS.gene058198 | MS.gene70838 | 0.863419 | 2.52E-64 | -1.69E-46 |
| MS.gene058818 | MS.gene70838 | 0.82795 | 1.18E-54 | -1.69E-46 |
| MS.gene058844 | MS.gene70838 | 0.806076 | 9.80E-50 | -1.69E-46 |
| MS.gene058853 | MS.gene70838 | 0.815974 | 7.02E-52 | -1.69E-46 |
| MS.gene059300 | MS.gene70838 | 0.87471 | 5.46E-68 | -1.69E-46 |
| MS.gene059553 | MS.gene70838 | 0.815241 | 1.02E-51 | -1.69E-46 |
| MS.gene060473 | MS.gene70838 | 0.848083 | 7.68E-60 | -1.69E-46 |
| MS.gene060565 | MS.gene70838 | 0.84334 | 1.49E-58 | -1.69E-46 |
| MS.gene06057 | MS.gene70838 | 0.885091 | 1.10E-71 | -1.69E-46 |
| MS.gene060825 | MS.gene70838 | 0.803913 | 2.78E-49 | -1.69E-46 |
| MS.gene06093 | MS.gene70838 | 0.801763 | 7.72E-49 | -1.69E-46 |
| MS.gene061099 | MS.gene70838 | 0.862319 | 5.51E-64 | -1.69E-46 |
| MS.gene061260 | MS.gene70838 | 0.849244 | 3.66E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70838.t1 | MTR_5g088980 | 96.454 | 423 | 13 | 1 | 1 | 423 | 1 | 421 | 0.0 | 840 |
| MS.gene70838.t1 | MTR_7g089080 | 52.597 | 462 | 169 | 12 | 1 | 419 | 1 | 455 | 7.75e-142 | 437 |
| MS.gene70838.t1 | MTR_5g023790 | 45.652 | 276 | 147 | 3 | 145 | 419 | 150 | 423 | 4.04e-77 | 246 |
| MS.gene70838.t1 | MTR_8g074000 | 38.338 | 373 | 207 | 7 | 45 | 416 | 74 | 424 | 1.06e-76 | 245 |
| MS.gene70838.t1 | MTR_5g023790 | 48.485 | 231 | 116 | 3 | 147 | 376 | 152 | 380 | 7.58e-68 | 220 |
| MS.gene70838.t1 | MTR_3g061680 | 45.200 | 250 | 129 | 3 | 160 | 404 | 15 | 261 | 9.39e-65 | 209 |
| MS.gene70838.t1 | MTR_3g060400 | 44.048 | 252 | 133 | 3 | 165 | 411 | 26 | 274 | 6.03e-64 | 207 |
| MS.gene70838.t1 | MTR_3g460990 | 44.048 | 252 | 133 | 3 | 165 | 411 | 26 | 274 | 6.03e-64 | 207 |
| MS.gene70838.t1 | MTR_3g060770 | 43.200 | 250 | 134 | 3 | 160 | 404 | 25 | 271 | 2.93e-62 | 203 |
| MS.gene70838.t1 | MTR_3g060820 | 44.898 | 245 | 127 | 4 | 165 | 404 | 20 | 261 | 2.53e-61 | 200 |
| MS.gene70838.t1 | MTR_3g088415 | 43.726 | 263 | 137 | 7 | 148 | 402 | 222 | 481 | 2.84e-61 | 207 |
| MS.gene70838.t1 | MTR_1g011470 | 41.860 | 258 | 142 | 5 | 165 | 415 | 159 | 415 | 4.88e-58 | 196 |
| MS.gene70838.t1 | MTR_3g107970 | 40.590 | 271 | 152 | 6 | 152 | 415 | 199 | 467 | 5.55e-57 | 194 |
| MS.gene70838.t1 | MTR_3g060410 | 44.889 | 225 | 119 | 2 | 194 | 413 | 131 | 355 | 7.05e-56 | 189 |
| MS.gene70838.t1 | MTR_6g045270 | 45.020 | 251 | 122 | 6 | 166 | 411 | 45 | 284 | 4.52e-54 | 182 |
| MS.gene70838.t1 | MTR_2g102550 | 40.441 | 272 | 153 | 6 | 150 | 414 | 151 | 420 | 1.14e-53 | 184 |
| MS.gene70838.t1 | MTR_3g088415 | 45.794 | 214 | 108 | 5 | 148 | 355 | 222 | 433 | 1.61e-53 | 184 |
| MS.gene70838.t1 | MTR_2g102520 | 32.921 | 404 | 230 | 14 | 7 | 377 | 36 | 431 | 2.68e-53 | 185 |
| MS.gene70838.t1 | MTR_5g023790 | 52.121 | 165 | 78 | 1 | 147 | 310 | 152 | 316 | 6.18e-52 | 178 |
| MS.gene70838.t1 | MTR_3g088405 | 38.403 | 263 | 146 | 8 | 152 | 401 | 229 | 488 | 6.39e-52 | 182 |
| MS.gene70838.t1 | MTR_1g018680 | 38.039 | 255 | 145 | 7 | 158 | 402 | 83 | 334 | 6.24e-48 | 167 |
| MS.gene70838.t1 | MTR_3g102520 | 35.433 | 254 | 154 | 4 | 158 | 402 | 82 | 334 | 1.60e-45 | 161 |
| MS.gene70838.t1 | MTR_3g102510 | 35.391 | 243 | 149 | 5 | 167 | 402 | 74 | 315 | 3.53e-44 | 157 |
| MS.gene70838.t1 | MTR_3g088415 | 48.485 | 165 | 82 | 3 | 148 | 310 | 222 | 385 | 4.08e-43 | 155 |
| MS.gene70838.t1 | MTR_3g102530 | 36.614 | 254 | 149 | 5 | 159 | 402 | 76 | 327 | 7.44e-43 | 154 |
| MS.gene70838.t1 | MTR_3g102560 | 40.654 | 214 | 123 | 4 | 186 | 397 | 86 | 297 | 2.65e-41 | 149 |
| MS.gene70838.t1 | MTR_3g102540 | 34.118 | 255 | 162 | 4 | 171 | 421 | 13 | 265 | 1.37e-35 | 132 |
| MS.gene70838.t1 | MTR_5g011900 | 39.344 | 183 | 106 | 2 | 154 | 333 | 60 | 240 | 4.39e-33 | 125 |
| MS.gene70838.t1 | MTR_5g044040 | 72.000 | 75 | 21 | 0 | 222 | 296 | 9 | 83 | 8.39e-32 | 117 |
| MS.gene70838.t1 | MTR_2g005960 | 35.156 | 128 | 68 | 4 | 146 | 258 | 101 | 228 | 2.14e-17 | 81.3 |
| MS.gene70838.t1 | MTR_1g032850 | 34.591 | 159 | 97 | 6 | 197 | 351 | 370 | 525 | 1.10e-13 | 73.2 |
| MS.gene70838.t1 | MTR_3g100710 | 28.906 | 128 | 85 | 3 | 193 | 315 | 91 | 217 | 7.58e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70838.t1 | AT5G06150 | 52.523 | 436 | 190 | 8 | 1 | 421 | 1 | 434 | 1.65e-141 | 411 |
| MS.gene70838.t1 | AT2G26760 | 50.831 | 421 | 168 | 7 | 1 | 420 | 1 | 383 | 8.82e-138 | 400 |
| MS.gene70838.t1 | AT3G11520 | 50.794 | 441 | 171 | 15 | 1 | 423 | 1 | 413 | 2.70e-132 | 387 |
| MS.gene70838.t1 | AT4G37490 | 50.231 | 432 | 190 | 9 | 1 | 419 | 2 | 421 | 5.25e-125 | 369 |
| MS.gene70838.t1 | AT3G11520 | 50.255 | 392 | 153 | 12 | 1 | 376 | 1 | 366 | 2.75e-114 | 340 |
| MS.gene70838.t1 | AT5G06150 | 50.298 | 336 | 143 | 8 | 1 | 317 | 1 | 331 | 2.18e-90 | 277 |
| MS.gene70838.t1 | AT1G20610 | 41.329 | 346 | 190 | 5 | 80 | 419 | 90 | 428 | 1.45e-81 | 257 |
| MS.gene70838.t1 | AT1G16330 | 40.203 | 296 | 169 | 5 | 128 | 419 | 355 | 646 | 8.96e-77 | 251 |
| MS.gene70838.t1 | AT1G76310 | 45.455 | 275 | 146 | 4 | 147 | 419 | 157 | 429 | 1.28e-76 | 244 |
| MS.gene70838.t1 | AT1G76310 | 41.254 | 303 | 146 | 5 | 147 | 419 | 157 | 457 | 2.84e-70 | 229 |
| MS.gene70838.t1 | AT2G17620 | 46.263 | 281 | 148 | 3 | 144 | 423 | 148 | 426 | 3.51e-69 | 225 |
| MS.gene70838.t1 | AT1G76310 | 48.707 | 232 | 115 | 4 | 147 | 376 | 157 | 386 | 5.98e-68 | 221 |
| MS.gene70838.t1 | AT4G35620 | 49.027 | 257 | 128 | 3 | 150 | 405 | 155 | 409 | 7.46e-68 | 222 |
| MS.gene70838.t1 | AT1G44110 | 43.182 | 264 | 139 | 7 | 147 | 402 | 175 | 435 | 7.91e-64 | 212 |
| MS.gene70838.t1 | AT1G34460 | 41.590 | 327 | 143 | 8 | 1 | 317 | 113 | 401 | 7.16e-61 | 205 |
| MS.gene70838.t1 | AT1G34460 | 41.590 | 327 | 143 | 8 | 1 | 317 | 113 | 401 | 7.16e-61 | 205 |
| MS.gene70838.t1 | AT1G34460 | 41.590 | 327 | 143 | 8 | 1 | 317 | 113 | 401 | 7.16e-61 | 205 |
| MS.gene70838.t1 | AT1G34460 | 41.590 | 327 | 143 | 8 | 1 | 317 | 113 | 401 | 7.16e-61 | 205 |
| MS.gene70838.t1 | AT1G34460 | 41.590 | 327 | 143 | 8 | 1 | 317 | 113 | 401 | 9.17e-61 | 205 |
| MS.gene70838.t1 | AT1G34460 | 41.590 | 327 | 143 | 8 | 1 | 317 | 113 | 401 | 1.11e-60 | 205 |
| MS.gene70838.t1 | AT4G35620 | 51.316 | 228 | 108 | 3 | 150 | 376 | 155 | 380 | 1.96e-60 | 201 |
| MS.gene70838.t1 | AT1G34460 | 42.671 | 307 | 127 | 8 | 20 | 317 | 121 | 387 | 5.70e-60 | 202 |
| MS.gene70838.t1 | AT1G34460 | 41.896 | 327 | 139 | 9 | 1 | 317 | 113 | 398 | 1.10e-59 | 202 |
| MS.gene70838.t1 | AT1G34460 | 41.896 | 327 | 139 | 9 | 1 | 317 | 113 | 398 | 1.10e-59 | 202 |
| MS.gene70838.t1 | AT5G25380 | 43.023 | 258 | 138 | 6 | 152 | 402 | 159 | 414 | 1.95e-57 | 194 |
| MS.gene70838.t1 | AT5G25380 | 42.222 | 270 | 147 | 6 | 152 | 414 | 159 | 426 | 2.27e-57 | 194 |
| MS.gene70838.t1 | AT5G25380 | 42.222 | 270 | 147 | 6 | 152 | 414 | 159 | 426 | 2.27e-57 | 194 |
| MS.gene70838.t1 | AT5G25380 | 42.222 | 270 | 147 | 6 | 152 | 414 | 165 | 432 | 2.84e-57 | 194 |
| MS.gene70838.t1 | AT1G77390 | 41.603 | 262 | 140 | 8 | 150 | 402 | 162 | 419 | 2.87e-57 | 194 |
| MS.gene70838.t1 | AT5G11300 | 40.780 | 282 | 158 | 6 | 148 | 421 | 152 | 432 | 1.06e-55 | 190 |
| MS.gene70838.t1 | AT1G80370 | 43.348 | 233 | 123 | 7 | 152 | 377 | 183 | 413 | 4.50e-52 | 181 |
| MS.gene70838.t1 | AT1G76310 | 51.445 | 173 | 81 | 3 | 147 | 317 | 157 | 328 | 9.73e-52 | 177 |
| MS.gene70838.t1 | AT5G43080 | 37.546 | 269 | 160 | 7 | 149 | 413 | 70 | 334 | 1.66e-50 | 174 |
| MS.gene70838.t1 | AT1G15570 | 37.184 | 277 | 165 | 6 | 152 | 421 | 174 | 448 | 1.35e-49 | 174 |
| MS.gene70838.t1 | AT1G47220 | 39.544 | 263 | 142 | 8 | 152 | 402 | 42 | 299 | 2.12e-49 | 171 |
| MS.gene70838.t1 | AT5G11300 | 44.954 | 218 | 112 | 5 | 148 | 358 | 152 | 368 | 5.39e-49 | 172 |
| MS.gene70838.t1 | AT5G43080 | 36.630 | 273 | 162 | 7 | 149 | 413 | 70 | 339 | 5.79e-49 | 170 |
| MS.gene70838.t1 | AT1G47210 | 36.765 | 272 | 159 | 7 | 152 | 413 | 88 | 356 | 1.42e-47 | 167 |
| MS.gene70838.t1 | AT1G47230 | 32.982 | 379 | 212 | 13 | 47 | 413 | 1 | 349 | 8.60e-47 | 165 |
| MS.gene70838.t1 | AT1G20590 | 44.767 | 172 | 93 | 2 | 226 | 397 | 65 | 234 | 3.04e-46 | 160 |
| MS.gene70838.t1 | AT1G47230 | 33.158 | 380 | 211 | 14 | 47 | 413 | 1 | 350 | 5.14e-45 | 160 |
| MS.gene70838.t1 | AT1G47210 | 42.453 | 106 | 56 | 3 | 152 | 253 | 88 | 192 | 3.48e-19 | 85.5 |
| MS.gene70838.t1 | AT1G70210 | 27.982 | 218 | 131 | 7 | 185 | 383 | 66 | 276 | 5.00e-15 | 76.3 |
| MS.gene70838.t1 | AT1G14750 | 26.702 | 191 | 133 | 5 | 197 | 383 | 385 | 572 | 3.86e-11 | 65.5 |
| MS.gene70838.t1 | AT1G14750 | 26.702 | 191 | 133 | 5 | 197 | 383 | 385 | 572 | 4.78e-11 | 65.1 |
Find 82 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTACTCCTTATGTCTTTC+TGG | 0.055058 | 5.3:-71752077 | MS.gene70838:CDS |
| CTGGGTTGATCACAAGATTT+TGG | 0.152837 | 5.3:+71753367 | None:intergenic |
| ACAAGCTGAAGTTCCTTTCT+AGG | 0.205889 | 5.3:+71752363 | None:intergenic |
| AGAGTCAGATAGAAAGTTTC+TGG | 0.213074 | 5.3:+71752423 | None:intergenic |
| TGAGAATAAGCAAAAGAATA+TGG | 0.258137 | 5.3:-71753427 | MS.gene70838:CDS |
| CATCCAAGTATGAAGAGATT+TGG | 0.283042 | 5.3:-71752317 | MS.gene70838:CDS |
| GCATGTTCCACCCTTGTTGC+AGG | 0.310814 | 5.3:+71753030 | None:intergenic |
| CTCATCTTAGCATTTATATC+TGG | 0.312904 | 5.3:+71752498 | None:intergenic |
| GAAAACTATCTTGAGAAATC+TGG | 0.320459 | 5.3:-71752116 | MS.gene70838:CDS |
| TAGAGAACAGGTTCTGGTTA+TGG | 0.323287 | 5.3:-71752140 | MS.gene70838:CDS |
| GTCAATGTAGATGGAAAATA+TGG | 0.326088 | 5.3:-71751912 | MS.gene70838:intron |
| CTTTCTAGGTACAGCCTTTG+TGG | 0.334259 | 5.3:+71752377 | None:intergenic |
| CTCCTTATGTCTTTCTGGTT+CGG | 0.340595 | 5.3:-71752072 | MS.gene70838:CDS |
| TTCAGAGTATCAGTCCAAAA+AGG | 0.345889 | 5.3:+71751776 | None:intergenic |
| ATGAAAGCTCACCATGAGTT+TGG | 0.368616 | 5.3:+71751609 | None:intergenic |
| CAAATGTACCTTGTTCTTCT+CGG | 0.392731 | 5.3:+71753173 | None:intergenic |
| ATCCAAGTATGAAGAGATTT+GGG | 0.401159 | 5.3:-71752316 | MS.gene70838:CDS |
| AATGTTCTCAACCAATTCCT+TGG | 0.401763 | 5.3:+71752730 | None:intergenic |
| TAGAGTTGTGCCCAAGGAAT+TGG | 0.412967 | 5.3:-71752741 | MS.gene70838:CDS |
| GAGAATAAGCAAAAGAATAT+GGG | 0.431647 | 5.3:-71753426 | MS.gene70838:CDS |
| GTGATCAACCCAGCAGATCT+TGG | 0.435107 | 5.3:-71753357 | MS.gene70838:CDS |
| CCAGCACCTTGTGAGGCGTT+TGG | 0.435541 | 5.3:+71753317 | None:intergenic |
| TACCTTGTTCTTCTCGGCTG+CGG | 0.437360 | 5.3:+71753179 | None:intergenic |
| GCATTAGCACCAAGATCTGC+TGG | 0.439323 | 5.3:+71753348 | None:intergenic |
| TCCACCCTTGTTGCAGGAGC+AGG | 0.439437 | 5.3:+71753036 | None:intergenic |
| GAACATTGATGTATCTGATC+AGG | 0.447150 | 5.3:-71752714 | MS.gene70838:CDS |
| TGCCCAAATCTCTTCATACT+TGG | 0.450835 | 5.3:+71752314 | None:intergenic |
| GCAGAAGCAGCGATCATTGA+AGG | 0.453580 | 5.3:+71751833 | None:intergenic |
| AAGGAGAAACAAGCTGTTAG+AGG | 0.454934 | 5.3:-71752946 | MS.gene70838:CDS |
| CAATGCATATATTAGAGAAC+AGG | 0.455302 | 5.3:-71752152 | MS.gene70838:CDS |
| AATTGTCAAGACCTTTAGTT+CGG | 0.458770 | 5.3:-71752893 | MS.gene70838:CDS |
| AGCTGAAAGCACCGAACTAA+AGG | 0.461925 | 5.3:+71752882 | None:intergenic |
| ATCTGATCAGGATAATGAAT+TGG | 0.467651 | 5.3:-71752702 | MS.gene70838:CDS |
| TGTTCCTGCTCCTGCAACAA+GGG | 0.467937 | 5.3:-71753040 | MS.gene70838:CDS |
| CTGCTCCAGAGAGCAGGCTA+AGG | 0.473888 | 5.3:-71751582 | MS.gene70838:CDS |
| ATGTTCTCAACCAATTCCTT+GGG | 0.477458 | 5.3:+71752731 | None:intergenic |
| ATTGCCCTTAGCCTGCTCTC+TGG | 0.478232 | 5.3:+71751577 | None:intergenic |
| CAGCCTTTGTGGACAAGAAT+CGG | 0.484227 | 5.3:+71752388 | None:intergenic |
| AGAAAGGAACTTCAGCTTGT+TGG | 0.485403 | 5.3:-71752360 | MS.gene70838:CDS |
| TGAGAGCAATTCTTATTGAC+TGG | 0.486519 | 5.3:-71752479 | MS.gene70838:CDS |
| TGTTCGTGTGCATGATTACA+TGG | 0.488876 | 5.3:-71752529 | MS.gene70838:CDS |
| ACAATAACTTCAGGTTCTGC+AGG | 0.490279 | 5.3:+71753000 | None:intergenic |
| TTTGTTACCTCTTTGTCAGA+GGG | 0.493535 | 5.3:+71752031 | None:intergenic |
| CACAAAGGCTGTACCTAGAA+AGG | 0.495888 | 5.3:-71752376 | MS.gene70838:CDS |
| ATTCTGCTGCTCCAGAGAGC+AGG | 0.501013 | 5.3:-71751588 | MS.gene70838:CDS |
| TTGTTGCAGGGCTCAGTTAG+CGG | 0.512442 | 5.3:-71753214 | MS.gene70838:intron |
| GTTTGTTACCTCTTTGTCAG+AGG | 0.516092 | 5.3:+71752030 | None:intergenic |
| GAGCTGATGACAATAACTTC+AGG | 0.520645 | 5.3:+71752991 | None:intergenic |
| GAGAAAACAAACCTCTGGGT+TGG | 0.526369 | 5.3:+71754067 | None:intergenic |
| ATATATTAGAGAACAGGTTC+TGG | 0.541725 | 5.3:-71752146 | MS.gene70838:CDS |
| TGTTACCTCTTTGTCAGAGG+GGG | 0.546102 | 5.3:+71752033 | None:intergenic |
| CTATCTTGAGAAATCTGGAA+TGG | 0.549489 | 5.3:-71752111 | MS.gene70838:CDS |
| TTGTTCCTGCTCCTGCAACA+AGG | 0.551530 | 5.3:-71753041 | MS.gene70838:CDS |
| TACCGAACCAGAAAGACATA+AGG | 0.554202 | 5.3:+71752070 | None:intergenic |
| AGAATAAGCAAAAGAATATG+GGG | 0.564634 | 5.3:-71753425 | MS.gene70838:CDS |
| CAGCTCTGATGAAGAATCTG+AGG | 0.565331 | 5.3:-71752974 | MS.gene70838:CDS |
| CGCTGCTTCTGCTGTATACG+CGG | 0.571832 | 5.3:-71751822 | MS.gene70838:CDS |
| TGAAGAGATTTGGGCACCAG+AGG | 0.576486 | 5.3:-71752307 | MS.gene70838:intron |
| TGCTTGTAGAGTTGTGCCCA+AGG | 0.577586 | 5.3:-71752747 | MS.gene70838:CDS |
| TGAAGAATCTGAGGAAGTGA+AGG | 0.582635 | 5.3:-71752965 | MS.gene70838:CDS |
| TCCTGCTCCTGCAACAAGGG+TGG | 0.587370 | 5.3:-71753037 | MS.gene70838:CDS |
| CAGAAGCAGCGATCATTGAA+GGG | 0.593935 | 5.3:+71751834 | None:intergenic |
| TGCTCCAGAGAGCAGGCTAA+GGG | 0.599044 | 5.3:-71751581 | MS.gene70838:CDS |
| CGGCAAGATCAACCCTTGAG+AGG | 0.604646 | 5.3:-71751802 | MS.gene70838:CDS |
| CATTAGCACCAAGATCTGCT+GGG | 0.606851 | 5.3:+71753349 | None:intergenic |
| TATCAAACCAGCACCTTGTG+AGG | 0.610247 | 5.3:+71753310 | None:intergenic |
| GCTACTCTGAGGAACAACTA+AGG | 0.611407 | 5.3:-71751742 | MS.gene70838:intron |
| CAGGGATTGTGCCAAACTCA+TGG | 0.623770 | 5.3:-71751620 | MS.gene70838:CDS |
| GGTGCTTTCAGCTAGAAGCA+AGG | 0.623928 | 5.3:-71752872 | MS.gene70838:intron |
| GCATCATAGAAAGTTCAGCT+AGG | 0.624531 | 5.3:+71751882 | None:intergenic |
| ATGTCACCAAACGCCTCACA+AGG | 0.630342 | 5.3:-71753323 | MS.gene70838:intron |
| AGCCGCAGCCGAGAAGAACA+AGG | 0.634015 | 5.3:-71753181 | MS.gene70838:intron |
| TGACCGATTCTTGTCCACAA+AGG | 0.641766 | 5.3:-71752391 | MS.gene70838:CDS |
| GATACTCTGAAGCACTACAC+AGG | 0.643296 | 5.3:-71751764 | MS.gene70838:CDS |
| TTGTTACCTCTTTGTCAGAG+GGG | 0.643410 | 5.3:+71752032 | None:intergenic |
| ACTGGTTGATTGAAGTGCAT+AGG | 0.656956 | 5.3:-71752461 | MS.gene70838:CDS |
| GTTCGTGTGCATGATTACAT+GGG | 0.685299 | 5.3:-71752528 | MS.gene70838:CDS |
| GATCATTGAAGGGCAGTACG+AGG | 0.686811 | 5.3:+71751844 | None:intergenic |
| GAATAAGCAAAAGAATATGG+GGG | 0.692143 | 5.3:-71753424 | MS.gene70838:CDS |
| ACCAGAAAGACATAAGGAGT+AGG | 0.696020 | 5.3:+71752076 | None:intergenic |
| GCACTACACAGGCTACTCTG+AGG | 0.714283 | 5.3:-71751753 | MS.gene70838:CDS |
| ACCGAACAAAACCAACCCAG+AGG | 0.746551 | 5.3:-71754078 | MS.gene70838:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAGTAATTTTAGTTAAT+AGG | - | chr5.3:71751617-71751636 | MS.gene70838:CDS | 10.0% |
| !!! | TAGTTTTTATTAAGTATTTA+TGG | - | chr5.3:71751959-71751978 | MS.gene70838:intron | 10.0% |
| !!! | TTTAGTAATTTTAGTTAATA+GGG | - | chr5.3:71751618-71751637 | MS.gene70838:CDS | 10.0% |
| !! | TGAAACAATAATATGTTATA+TGG | - | chr5.3:71753365-71753384 | MS.gene70838:CDS | 15.0% |
| !! | AAATTAAAAAGATAAGCATG+AGG | + | chr5.3:71752345-71752364 | None:intergenic | 20.0% |
| !! | ATAAACCGCATAAAAAATAA+AGG | + | chr5.3:71753330-71753349 | None:intergenic | 20.0% |
| !! | ATTAACAAAAATCATAGATC+AGG | + | chr5.3:71752147-71752166 | None:intergenic | 20.0% |
| !! | ATTACTTTATAGTTTGATTG+TGG | - | chr5.3:71753596-71753615 | MS.gene70838:intron | 20.0% |
| !! | CAACATAAACAAATAAAATC+AGG | + | chr5.3:71752369-71752388 | None:intergenic | 20.0% |
| !! | TAAACCGCATAAAAAATAAA+GGG | + | chr5.3:71753329-71753348 | None:intergenic | 20.0% |
| !! | TGTTCACTGTTTAAATTAAA+TGG | - | chr5.3:71751715-71751734 | MS.gene70838:intron | 20.0% |
| !! | TTTGTTTATTTATGTTGTCA+GGG | - | chr5.3:71753965-71753984 | MS.gene70838:intron | 20.0% |
| !!! | ATTTGGTAATTTTGGTTATT+AGG | - | chr5.3:71751828-71751847 | MS.gene70838:CDS | 20.0% |
| !!! | TATTAGTCTACATTGAAAAA+TGG | + | chr5.3:71752804-71752823 | None:intergenic | 20.0% |
| !!! | TCTTTTAATCTTGTGAAATA+TGG | - | chr5.3:71752760-71752779 | MS.gene70838:intron | 20.0% |
| !!! | TGATCTATGATTTTTGTTAA+TGG | - | chr5.3:71752146-71752165 | MS.gene70838:CDS | 20.0% |
| !!! | TGATTTTTGTTAATGGAATT+AGG | - | chr5.3:71752153-71752172 | MS.gene70838:CDS | 20.0% |
| !!! | TTTGATTTTCTGTAAAGTTT+TGG | - | chr5.3:71751856-71751875 | MS.gene70838:CDS | 20.0% |
| !!! | TTTGGTAATTTTGGTTATTA+GGG | - | chr5.3:71751829-71751848 | MS.gene70838:CDS | 20.0% |
| !!! | TTTTGTTTATTTATGTTGTC+AGG | - | chr5.3:71753964-71753983 | MS.gene70838:intron | 20.0% |
| ! | AGAATAAGCAAAAGAATATG+GGG | - | chr5.3:71752178-71752197 | MS.gene70838:CDS | 25.0% |
| ! | GAGAATAAGCAAAAGAATAT+GGG | - | chr5.3:71752177-71752196 | MS.gene70838:CDS | 25.0% |
| ! | TATTTGTTCAGTGTGTAAAT+GGG | - | chr5.3:71752051-71752070 | MS.gene70838:CDS | 25.0% |
| ! | TGAGAATAAGCAAAAGAATA+TGG | - | chr5.3:71752176-71752195 | MS.gene70838:CDS | 25.0% |
| ! | TTATTTGTTCAGTGTGTAAA+TGG | - | chr5.3:71752050-71752069 | MS.gene70838:CDS | 25.0% |
| ! | TTTATTTCATTTGTGTGTAC+AGG | - | chr5.3:71753403-71753422 | MS.gene70838:CDS | 25.0% |
| ! | TTTCGAGATACAATGTATTA+AGG | + | chr5.3:71752505-71752524 | None:intergenic | 25.0% |
| !! | GATTTGATTCTGAAAAATTG+AGG | - | chr5.3:71751584-71751603 | MS.gene70838:CDS | 25.0% |
| !!! | AACTCCCTTTATTTTTTATG+CGG | - | chr5.3:71753322-71753341 | MS.gene70838:intron | 25.0% |
| !!! | TATCTCGAAATTTGTTTTGA+TGG | - | chr5.3:71752515-71752534 | MS.gene70838:CDS | 25.0% |
| !!! | TTTTCTGAGATGAAATATGA+GGG | - | chr5.3:71751927-71751946 | MS.gene70838:intron | 25.0% |
| AAAAGAGAAAACAAACCTCT+GGG | + | chr5.3:71751543-71751562 | None:intergenic | 30.0% | |
| AATATGGTTTATGTGACTTG+TGG | - | chr5.3:71752776-71752795 | MS.gene70838:intron | 30.0% | |
| AATTGTCAAGACCTTTAGTT+CGG | - | chr5.3:71752710-71752729 | MS.gene70838:CDS | 30.0% | |
| ATATATTAGAGAACAGGTTC+TGG | - | chr5.3:71753457-71753476 | MS.gene70838:intron | 30.0% | |
| ATCCAAGTATGAAGAGATTT+GGG | - | chr5.3:71753287-71753306 | MS.gene70838:intron | 30.0% | |
| ATCTGATCAGGATAATGAAT+TGG | - | chr5.3:71752901-71752920 | MS.gene70838:CDS | 30.0% | |
| CAATGCATATATTAGAGAAC+AGG | - | chr5.3:71753451-71753470 | MS.gene70838:intron | 30.0% | |
| CTCATCTTAGCATTTATATC+TGG | + | chr5.3:71753108-71753127 | None:intergenic | 30.0% | |
| GAAAACTATCTTGAGAAATC+TGG | - | chr5.3:71753487-71753506 | MS.gene70838:intron | 30.0% | |
| GAATAAGCAAAAGAATATGG+GGG | - | chr5.3:71752179-71752198 | MS.gene70838:CDS | 30.0% | |
| GTCAATGTAGATGGAAAATA+TGG | - | chr5.3:71753691-71753710 | MS.gene70838:intron | 30.0% | |
| TCTGAAAAATTGAGGATTGA+AGG | - | chr5.3:71751592-71751611 | MS.gene70838:CDS | 30.0% | |
| ! | AAAGGTCTTGACAATTTTCT+TGG | + | chr5.3:71752706-71752725 | None:intergenic | 30.0% |
| ! | ATGAAATATGAGGGTGATTT+TGG | - | chr5.3:71751812-71751831 | MS.gene70838:CDS | 30.0% |
| ! | CTACTTTGTTCCATTTTCAA+AGG | - | chr5.3:71752471-71752490 | MS.gene70838:CDS | 30.0% |
| ! | GAACATAATTTGTCAAACAC+AGG | - | chr5.3:71752832-71752851 | MS.gene70838:intron | 30.0% |
| ! | TCAAACTTTAGAAAACAACG+AGG | + | chr5.3:71751745-71751764 | None:intergenic | 30.0% |
| ! | TTGTTTATGTTGTTGTTGCA+GGG | - | chr5.3:71752377-71752396 | MS.gene70838:CDS | 30.0% |
| ! | TTTGTTTATGTTGTTGTTGC+AGG | - | chr5.3:71752376-71752395 | MS.gene70838:CDS | 30.0% |
| !! | AGATTCTGAAGACAAGTTTT+TGG | + | chr5.3:71754105-71754124 | None:intergenic | 30.0% |
| !! | GATTCTGAGATGAAATATGA+GGG | - | chr5.3:71751803-71751822 | MS.gene70838:CDS | 30.0% |
| !! | TGATTCTGAGATGAAATATG+AGG | - | chr5.3:71751802-71751821 | MS.gene70838:CDS | 30.0% |
| !!! | GTTTTCTGAGATGAAATATG+AGG | - | chr5.3:71751926-71751945 | MS.gene70838:intron | 30.0% |
| !!! | TCTGTTTTTGTCAATGTAGA+TGG | - | chr5.3:71753682-71753701 | MS.gene70838:intron | 30.0% |
| AATGTTCTCAACCAATTCCT+TGG | + | chr5.3:71752876-71752895 | None:intergenic | 35.0% | |
| ACAGAATCCACAATTAGACA+AGG | + | chr5.3:71753667-71753686 | None:intergenic | 35.0% | |
| AGAGTCAGATAGAAAGTTTC+TGG | + | chr5.3:71753183-71753202 | None:intergenic | 35.0% | |
| ATGTTCTCAACCAATTCCTT+GGG | + | chr5.3:71752875-71752894 | None:intergenic | 35.0% | |
| CAAATGTACCTTGTTCTTCT+CGG | + | chr5.3:71752433-71752452 | None:intergenic | 35.0% | |
| CATCCAAGTATGAAGAGATT+TGG | - | chr5.3:71753286-71753305 | MS.gene70838:intron | 35.0% | |
| CTATCTTGAGAAATCTGGAA+TGG | - | chr5.3:71753492-71753511 | MS.gene70838:intron | 35.0% | |
| GAAAAGAGAAAACAAACCTC+TGG | + | chr5.3:71751544-71751563 | None:intergenic | 35.0% | |
| GAACATTGATGTATCTGATC+AGG | - | chr5.3:71752889-71752908 | MS.gene70838:CDS | 35.0% | |
| GATGAAATATGAGGGTGATT+TGG | - | chr5.3:71751811-71751830 | MS.gene70838:CDS | 35.0% | |
| TGAGAGCAATTCTTATTGAC+TGG | - | chr5.3:71753124-71753143 | MS.gene70838:intron | 35.0% | |
| TTAGTGTTTACGTGATTCTC+TGG | - | chr5.3:71752099-71752118 | MS.gene70838:CDS | 35.0% | |
| TTGACTTTGATGAATGACAC+AGG | - | chr5.3:71753047-71753066 | MS.gene70838:CDS | 35.0% | |
| TTTGTTACCTCTTTGTCAGA+GGG | + | chr5.3:71753575-71753594 | None:intergenic | 35.0% | |
| ! | GGAAACACAACCTTTGAAAA+TGG | + | chr5.3:71752484-71752503 | None:intergenic | 35.0% |
| ! | TCAGAGTATCAGTCCAAAAA+GGG | + | chr5.3:71753829-71753848 | None:intergenic | 35.0% |
| ! | TTCAGAGTATCAGTCCAAAA+AGG | + | chr5.3:71753830-71753849 | None:intergenic | 35.0% |
| !!! | TGAGGGTGATTTGGTAATTT+TGG | - | chr5.3:71751820-71751839 | MS.gene70838:CDS | 35.0% |
| AAGGAGAAACAAGCTGTTAG+AGG | - | chr5.3:71752657-71752676 | MS.gene70838:CDS | 40.0% | |
| AATAAAGGGAGTTCTACCTC+TGG | + | chr5.3:71753315-71753334 | None:intergenic | 40.0% | |
| ACAAGCTGAAGTTCCTTTCT+AGG | + | chr5.3:71753243-71753262 | None:intergenic | 40.0% | |
| ACCAGAAAGACATAAGGAGT+AGG | + | chr5.3:71753530-71753549 | None:intergenic | 40.0% | |
| ACTGGTTGATTGAAGTGCAT+AGG | - | chr5.3:71753142-71753161 | MS.gene70838:intron | 40.0% | |
| AGAAAGGAACTTCAGCTTGT+TGG | - | chr5.3:71753243-71753262 | MS.gene70838:intron | 40.0% | |
| ATGAAAGCTCACCATGAGTT+TGG | + | chr5.3:71753997-71754016 | None:intergenic | 40.0% | |
| CAAAAGAATATGGGGGTTGA+AGG | - | chr5.3:71752186-71752205 | MS.gene70838:intron | 40.0% | |
| GAGCTGATGACAATAACTTC+AGG | + | chr5.3:71752615-71752634 | None:intergenic | 40.0% | |
| GCATCATAGAAAGTTCAGCT+AGG | + | chr5.3:71753724-71753743 | None:intergenic | 40.0% | |
| GTTCGTGTGCATGATTACAT+GGG | - | chr5.3:71753075-71753094 | MS.gene70838:intron | 40.0% | |
| TACCGAACCAGAAAGACATA+AGG | + | chr5.3:71753536-71753555 | None:intergenic | 40.0% | |
| TCCTACTCCTTATGTCTTTC+TGG | - | chr5.3:71753526-71753545 | MS.gene70838:intron | 40.0% | |
| TGAAGAATCTGAGGAAGTGA+AGG | - | chr5.3:71752638-71752657 | MS.gene70838:intron | 40.0% | |
| TGATGCAATGTGGAATGGAA+CGG | - | chr5.3:71753641-71753660 | MS.gene70838:intron | 40.0% | |
| TGCCCAAATCTCTTCATACT+TGG | + | chr5.3:71753292-71753311 | None:intergenic | 40.0% | |
| TGTTCGTGTGCATGATTACA+TGG | - | chr5.3:71753074-71753093 | MS.gene70838:intron | 40.0% | |
| TTGTTACCTCTTTGTCAGAG+GGG | + | chr5.3:71753574-71753593 | None:intergenic | 40.0% | |
| ! | ACAATAACTTCAGGTTCTGC+AGG | + | chr5.3:71752606-71752625 | None:intergenic | 40.0% |
| ! | GGTCTTGACAATTTTCTTGG+TGG | + | chr5.3:71752703-71752722 | None:intergenic | 40.0% |
| ! | GTTTGTTACCTCTTTGTCAG+AGG | + | chr5.3:71753576-71753595 | None:intergenic | 40.0% |
| ! | TAGAGAACAGGTTCTGGTTA+TGG | - | chr5.3:71753463-71753482 | MS.gene70838:intron | 40.0% |
| !! | CTCCTTATGTCTTTCTGGTT+CGG | - | chr5.3:71753531-71753550 | MS.gene70838:intron | 40.0% |
| !!! | CTGGGTTGATCACAAGATTT+TGG | + | chr5.3:71752239-71752258 | None:intergenic | 40.0% |
| !!! | TCTGAAGACAAGTTTTTGGC+TGG | + | chr5.3:71754101-71754120 | None:intergenic | 40.0% |
| CACAAAGGCTGTACCTAGAA+AGG | - | chr5.3:71753227-71753246 | MS.gene70838:intron | 45.0% | |
| CAGAAGCAGCGATCATTGAA+GGG | + | chr5.3:71753772-71753791 | None:intergenic | 45.0% | |
| CAGCCTTTGTGGACAAGAAT+CGG | + | chr5.3:71753218-71753237 | None:intergenic | 45.0% | |
| CAGTGTGTAAATGGGTCTGA+GGG | - | chr5.3:71752059-71752078 | MS.gene70838:CDS | 45.0% | |
| CATTAGCACCAAGATCTGCT+GGG | + | chr5.3:71752257-71752276 | None:intergenic | 45.0% | |
| CTTTCTAGGTACAGCCTTTG+TGG | + | chr5.3:71753229-71753248 | None:intergenic | 45.0% | |
| GAGAAAACAAACCTCTGGGT+TGG | + | chr5.3:71751539-71751558 | None:intergenic | 45.0% | |
| GTCATGTGACTGATGCAATG+TGG | - | chr5.3:71753631-71753650 | MS.gene70838:intron | 45.0% | |
| GTGACTGATGCAATGTGGAA+TGG | - | chr5.3:71753636-71753655 | MS.gene70838:intron | 45.0% | |
| TAGAGTTGTGCCCAAGGAAT+TGG | - | chr5.3:71752862-71752881 | MS.gene70838:intron | 45.0% | |
| TATCAAACCAGCACCTTGTG+AGG | + | chr5.3:71752296-71752315 | None:intergenic | 45.0% | |
| TCAGTGTGTAAATGGGTCTG+AGG | - | chr5.3:71752058-71752077 | MS.gene70838:CDS | 45.0% | |
| TGTTACCTCTTTGTCAGAGG+GGG | + | chr5.3:71753573-71753592 | None:intergenic | 45.0% | |
| ! | CAGCTCTGATGAAGAATCTG+AGG | - | chr5.3:71752629-71752648 | MS.gene70838:intron | 45.0% |
| ! | GCTACTCTGAGGAACAACTA+AGG | - | chr5.3:71753861-71753880 | MS.gene70838:intron | 45.0% |
| ! | TGACCGATTCTTGTCCACAA+AGG | - | chr5.3:71753212-71753231 | MS.gene70838:intron | 45.0% |
| !! | AGCTGAAAGCACCGAACTAA+AGG | + | chr5.3:71752724-71752743 | None:intergenic | 45.0% |
| !! | GATACTCTGAAGCACTACAC+AGG | - | chr5.3:71753839-71753858 | MS.gene70838:intron | 45.0% |
| !!! | ACCTCTGGGTTGGTTTTGTT+CGG | + | chr5.3:71751529-71751548 | None:intergenic | 45.0% |
| ACCGAACAAAACCAACCCAG+AGG | - | chr5.3:71751525-71751544 | MS.gene70838:CDS | 50.0% | |
| ATGTCACCAAACGCCTCACA+AGG | - | chr5.3:71752280-71752299 | MS.gene70838:intron | 50.0% | |
| CAGGGATTGTGCCAAACTCA+TGG | - | chr5.3:71753983-71754002 | MS.gene70838:intron | 50.0% | |
| CCAAAAAGGGCTCCTCTCAA+GGG | + | chr5.3:71753816-71753835 | None:intergenic | 50.0% | |
| GATCATTGAAGGGCAGTACG+AGG | + | chr5.3:71753762-71753781 | None:intergenic | 50.0% | |
| GCAGAAGCAGCGATCATTGA+AGG | + | chr5.3:71753773-71753792 | None:intergenic | 50.0% | |
| GCATTAGCACCAAGATCTGC+TGG | + | chr5.3:71752258-71752277 | None:intergenic | 50.0% | |
| GGTGCTTTCAGCTAGAAGCA+AGG | - | chr5.3:71752731-71752750 | MS.gene70838:CDS | 50.0% | |
| GTGATCAACCCAGCAGATCT+TGG | - | chr5.3:71752246-71752265 | MS.gene70838:intron | 50.0% | |
| TACCTTGTTCTTCTCGGCTG+CGG | + | chr5.3:71752427-71752446 | None:intergenic | 50.0% | |
| TCCAAAAAGGGCTCCTCTCA+AGG | + | chr5.3:71753817-71753836 | None:intergenic | 50.0% | |
| TGAAGAGATTTGGGCACCAG+AGG | - | chr5.3:71753296-71753315 | MS.gene70838:intron | 50.0% | |
| TGCTTGTAGAGTTGTGCCCA+AGG | - | chr5.3:71752856-71752875 | MS.gene70838:intron | 50.0% | |
| TGTGTAAATGGGTCTGAGGG+TGG | - | chr5.3:71752062-71752081 | MS.gene70838:CDS | 50.0% | |
| TGTTCCTGCTCCTGCAACAA+GGG | - | chr5.3:71752563-71752582 | MS.gene70838:intron | 50.0% | |
| TTGTTCCTGCTCCTGCAACA+AGG | - | chr5.3:71752562-71752581 | MS.gene70838:intron | 50.0% | |
| TTGTTGCAGGGCTCAGTTAG+CGG | - | chr5.3:71752389-71752408 | MS.gene70838:CDS | 50.0% | |
| ! | GGAACGGCCTTGTCTAATTG+TGG | - | chr5.3:71753657-71753676 | MS.gene70838:intron | 50.0% |
| !!! | CTGGGTTGGTTTTGTTCGGT+AGG | + | chr5.3:71751525-71751544 | None:intergenic | 50.0% |
| ATTCTGCTGCTCCAGAGAGC+AGG | - | chr5.3:71754015-71754034 | MS.gene70838:intron | 55.0% | |
| ATTGCCCTTAGCCTGCTCTC+TGG | + | chr5.3:71754029-71754048 | None:intergenic | 55.0% | |
| CGCTGCTTCTGCTGTATACG+CGG | - | chr5.3:71753781-71753800 | MS.gene70838:intron | 55.0% | |
| CGGCAAGATCAACCCTTGAG+AGG | - | chr5.3:71753801-71753820 | MS.gene70838:intron | 55.0% | |
| GCACTACACAGGCTACTCTG+AGG | - | chr5.3:71753850-71753869 | MS.gene70838:intron | 55.0% | |
| GCATGTTCCACCCTTGTTGC+AGG | + | chr5.3:71752576-71752595 | None:intergenic | 55.0% | |
| TACCTCTTTGTCAGAGGGGG+TGG | + | chr5.3:71753570-71753589 | None:intergenic | 55.0% | |
| TGCTCCAGAGAGCAGGCTAA+GGG | - | chr5.3:71754022-71754041 | MS.gene70838:intron | 55.0% | |
| ! | CCCTTGAGAGGAGCCCTTTT+TGG | - | chr5.3:71753813-71753832 | MS.gene70838:intron | 55.0% |
| AGCCGCAGCCGAGAAGAACA+AGG | - | chr5.3:71752422-71752441 | MS.gene70838:CDS | 60.0% | |
| CCAAACGCCTCACAAGGTGC+TGG | - | chr5.3:71752286-71752305 | MS.gene70838:intron | 60.0% | |
| CTCCACCCCCTCTGACAAAG+AGG | - | chr5.3:71753565-71753584 | MS.gene70838:intron | 60.0% | |
| CTCTTTGTCAGAGGGGGTGG+AGG | + | chr5.3:71753567-71753586 | None:intergenic | 60.0% | |
| CTGCTCCAGAGAGCAGGCTA+AGG | - | chr5.3:71754021-71754040 | MS.gene70838:intron | 60.0% | |
| TCCACCCTTGTTGCAGGAGC+AGG | + | chr5.3:71752570-71752589 | None:intergenic | 60.0% | |
| TCCTGCTCCTGCAACAAGGG+TGG | - | chr5.3:71752566-71752585 | MS.gene70838:intron | 60.0% | |
| ! | CCAGCACCTTGTGAGGCGTT+TGG | + | chr5.3:71752289-71752308 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 71751498 | 71754127 | 71751498 | ID=MS.gene70838 |
| chr5.3 | mRNA | 71751498 | 71754127 | 71751498 | ID=MS.gene70838.t1;Parent=MS.gene70838 |
| chr5.3 | exon | 71754079 | 71754127 | 71754079 | ID=MS.gene70838.t1.exon1;Parent=MS.gene70838.t1 |
| chr5.3 | CDS | 71754079 | 71754127 | 71754079 | ID=cds.MS.gene70838.t1;Parent=MS.gene70838.t1 |
| chr5.3 | exon | 71753324 | 71753450 | 71753324 | ID=MS.gene70838.t1.exon2;Parent=MS.gene70838.t1 |
| chr5.3 | CDS | 71753324 | 71753450 | 71753324 | ID=cds.MS.gene70838.t1;Parent=MS.gene70838.t1 |
| chr5.3 | exon | 71753182 | 71753227 | 71753182 | ID=MS.gene70838.t1.exon3;Parent=MS.gene70838.t1 |
| chr5.3 | CDS | 71753182 | 71753227 | 71753182 | ID=cds.MS.gene70838.t1;Parent=MS.gene70838.t1 |
| chr5.3 | exon | 71752873 | 71753067 | 71752873 | ID=MS.gene70838.t1.exon4;Parent=MS.gene70838.t1 |
| chr5.3 | CDS | 71752873 | 71753067 | 71752873 | ID=cds.MS.gene70838.t1;Parent=MS.gene70838.t1 |
| chr5.3 | exon | 71752652 | 71752771 | 71752652 | ID=MS.gene70838.t1.exon5;Parent=MS.gene70838.t1 |
| chr5.3 | CDS | 71752652 | 71752771 | 71752652 | ID=cds.MS.gene70838.t1;Parent=MS.gene70838.t1 |
| chr5.3 | exon | 71752308 | 71752556 | 71752308 | ID=MS.gene70838.t1.exon6;Parent=MS.gene70838.t1 |
| chr5.3 | CDS | 71752308 | 71752556 | 71752308 | ID=cds.MS.gene70838.t1;Parent=MS.gene70838.t1 |
| chr5.3 | exon | 71752039 | 71752200 | 71752039 | ID=MS.gene70838.t1.exon7;Parent=MS.gene70838.t1 |
| chr5.3 | CDS | 71752039 | 71752200 | 71752039 | ID=cds.MS.gene70838.t1;Parent=MS.gene70838.t1 |
| chr5.3 | exon | 71751743 | 71751924 | 71751743 | ID=MS.gene70838.t1.exon8;Parent=MS.gene70838.t1 |
| chr5.3 | CDS | 71751743 | 71751924 | 71751743 | ID=cds.MS.gene70838.t1;Parent=MS.gene70838.t1 |
| chr5.3 | exon | 71751498 | 71751639 | 71751498 | ID=MS.gene70838.t1.exon9;Parent=MS.gene70838.t1 |
| chr5.3 | CDS | 71751498 | 71751639 | 71751498 | ID=cds.MS.gene70838.t1;Parent=MS.gene70838.t1 |
| Gene Sequence |
| Protein sequence |
