Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74985.t1 | GAU17991.1 | 96.7 | 239 | 8 | 0 | 1 | 239 | 1 | 239 | 1.70E-127 | 465.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74985.t1 | Q9M376 | 88.5 | 191 | 22 | 0 | 1 | 191 | 1 | 191 | 4.0e-93 | 342.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74985.t1 | A0A2Z6LNZ2 | 96.7 | 239 | 8 | 0 | 1 | 239 | 1 | 239 | 1.2e-127 | 465.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049419 | MS.gene74985 | -0.81138 | 7.21E-51 | -1.69E-46 |
| MS.gene050752 | MS.gene74985 | 0.847007 | 1.52E-59 | -1.69E-46 |
| MS.gene050945 | MS.gene74985 | 0.834318 | 3.21E-56 | -1.69E-46 |
| MS.gene050955 | MS.gene74985 | 0.829639 | 4.60E-55 | -1.69E-46 |
| MS.gene051043 | MS.gene74985 | 0.839777 | 1.29E-57 | -1.69E-46 |
| MS.gene051234 | MS.gene74985 | 0.805081 | 1.59E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene74985 | 0.809646 | 1.71E-50 | -1.69E-46 |
| MS.gene051699 | MS.gene74985 | 0.841992 | 3.39E-58 | -1.69E-46 |
| MS.gene051902 | MS.gene74985 | 0.806233 | 9.09E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene74985 | 0.842817 | 2.05E-58 | -1.69E-46 |
| MS.gene052242 | MS.gene74985 | -0.803621 | 3.19E-49 | -1.69E-46 |
| MS.gene052296 | MS.gene74985 | 0.806087 | 9.75E-50 | -1.69E-46 |
| MS.gene052479 | MS.gene74985 | 0.807434 | 5.06E-50 | -1.69E-46 |
| MS.gene052793 | MS.gene74985 | 0.804929 | 1.71E-49 | -1.69E-46 |
| MS.gene052818 | MS.gene74985 | -0.813832 | 2.10E-51 | -1.69E-46 |
| MS.gene053189 | MS.gene74985 | 0.802633 | 5.11E-49 | -1.69E-46 |
| MS.gene053879 | MS.gene74985 | 0.831341 | 1.76E-55 | -1.69E-46 |
| MS.gene054222 | MS.gene74985 | 0.819011 | 1.45E-52 | -1.69E-46 |
| MS.gene054403 | MS.gene74985 | 0.852237 | 5.27E-61 | -1.69E-46 |
| MS.gene05469 | MS.gene74985 | 0.830442 | 2.93E-55 | -1.69E-46 |
| MS.gene057102 | MS.gene74985 | 0.818904 | 1.54E-52 | -1.69E-46 |
| MS.gene057576 | MS.gene74985 | 0.805086 | 1.58E-49 | -1.69E-46 |
| MS.gene057584 | MS.gene74985 | 0.801232 | 9.92E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene74985 | 0.842854 | 2.00E-58 | -1.69E-46 |
| MS.gene058074 | MS.gene74985 | 0.838957 | 2.11E-57 | -1.69E-46 |
| MS.gene058159 | MS.gene74985 | 0.820649 | 6.14E-53 | -1.69E-46 |
| MS.gene059146 | MS.gene74985 | 0.815835 | 7.54E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene74985 | -0.82779 | 1.29E-54 | -1.69E-46 |
| MS.gene060259 | MS.gene74985 | 0.804931 | 1.70E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene74985 | 0.80123 | 9.93E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74985.t1 | MTR_1g111890 | 99.476 | 191 | 1 | 0 | 1 | 191 | 1 | 191 | 7.23e-141 | 394 |
| MS.gene74985.t1 | MTR_4g022570 | 58.115 | 191 | 61 | 1 | 1 | 191 | 1 | 172 | 8.02e-82 | 244 |
| MS.gene74985.t1 | MTR_4g083490 | 57.895 | 190 | 61 | 2 | 2 | 191 | 4 | 174 | 4.81e-80 | 239 |
| MS.gene74985.t1 | MTR_2g028790 | 58.421 | 190 | 60 | 2 | 2 | 191 | 6 | 176 | 7.62e-79 | 236 |
| MS.gene74985.t1 | MTR_1g047720 | 57.592 | 191 | 62 | 2 | 1 | 191 | 1 | 172 | 9.90e-79 | 236 |
| MS.gene74985.t1 | MTR_7g058900 | 55.446 | 202 | 69 | 2 | 1 | 201 | 1 | 182 | 5.43e-78 | 234 |
| MS.gene74985.t1 | MTR_2g436870 | 50.785 | 191 | 75 | 1 | 1 | 191 | 1 | 172 | 7.25e-67 | 206 |
| MS.gene74985.t1 | MTR_7g058640 | 48.293 | 205 | 83 | 3 | 1 | 201 | 1 | 186 | 4.91e-66 | 204 |
| MS.gene74985.t1 | MTR_7g058640 | 49.479 | 192 | 78 | 2 | 1 | 192 | 1 | 173 | 1.27e-65 | 202 |
| MS.gene74985.t1 | MTR_1g047710 | 51.969 | 127 | 42 | 1 | 65 | 191 | 13 | 120 | 2.29e-41 | 138 |
| MS.gene74985.t1 | MTR_4g022470 | 51.200 | 125 | 42 | 1 | 65 | 189 | 11 | 116 | 6.60e-41 | 136 |
| MS.gene74985.t1 | MTR_5g089370 | 37.634 | 186 | 94 | 3 | 5 | 189 | 2 | 166 | 1.16e-37 | 131 |
| MS.gene74985.t1 | MTR_4g052550 | 34.409 | 186 | 100 | 4 | 5 | 189 | 2 | 166 | 1.65e-33 | 120 |
| MS.gene74985.t1 | MTR_4g115390 | 34.392 | 189 | 98 | 3 | 5 | 188 | 2 | 169 | 4.01e-31 | 114 |
| MS.gene74985.t1 | MTR_7g058640 | 42.520 | 127 | 50 | 3 | 79 | 201 | 1 | 108 | 5.86e-28 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74985.t1 | AT3G54300 | 88.482 | 191 | 22 | 0 | 1 | 191 | 1 | 191 | 7.44e-120 | 341 |
| MS.gene74985.t1 | AT3G54300 | 88.482 | 191 | 22 | 0 | 1 | 191 | 1 | 191 | 7.44e-120 | 341 |
| MS.gene74985.t1 | AT3G54300 | 88.482 | 191 | 22 | 0 | 1 | 191 | 1 | 191 | 7.44e-120 | 341 |
| MS.gene74985.t1 | AT1G04760 | 60.209 | 191 | 57 | 1 | 1 | 191 | 1 | 172 | 6.19e-82 | 244 |
| MS.gene74985.t1 | AT1G04760 | 60.209 | 191 | 57 | 1 | 1 | 191 | 1 | 172 | 6.19e-82 | 244 |
| MS.gene74985.t1 | AT2G32670 | 59.162 | 191 | 59 | 1 | 1 | 191 | 66 | 237 | 1.24e-80 | 243 |
| MS.gene74985.t1 | AT2G33120 | 59.162 | 191 | 59 | 2 | 1 | 191 | 1 | 172 | 2.20e-79 | 238 |
| MS.gene74985.t1 | AT1G04750 | 58.639 | 191 | 60 | 2 | 1 | 191 | 1 | 172 | 1.93e-78 | 235 |
| MS.gene74985.t1 | AT2G33120 | 56.784 | 199 | 59 | 3 | 1 | 191 | 1 | 180 | 3.22e-76 | 230 |
| MS.gene74985.t1 | AT4G15780 | 49.231 | 195 | 79 | 2 | 1 | 194 | 1 | 176 | 9.24e-66 | 202 |
| MS.gene74985.t1 | AT2G33110 | 51.381 | 181 | 69 | 2 | 1 | 181 | 1 | 162 | 5.93e-62 | 192 |
| MS.gene74985.t1 | AT2G33110 | 51.381 | 181 | 69 | 2 | 1 | 181 | 1 | 162 | 1.73e-61 | 192 |
| MS.gene74985.t1 | AT1G04750 | 58.559 | 111 | 27 | 2 | 81 | 191 | 3 | 94 | 8.52e-37 | 127 |
| MS.gene74985.t1 | AT1G04750 | 58.559 | 111 | 27 | 2 | 81 | 191 | 3 | 94 | 8.52e-37 | 127 |
| MS.gene74985.t1 | AT1G04750 | 58.559 | 111 | 27 | 2 | 81 | 191 | 3 | 94 | 8.52e-37 | 127 |
| MS.gene74985.t1 | AT5G11150 | 36.364 | 187 | 96 | 3 | 5 | 189 | 2 | 167 | 2.67e-36 | 128 |
| MS.gene74985.t1 | AT4G32150 | 36.559 | 186 | 96 | 3 | 5 | 189 | 2 | 166 | 2.95e-36 | 127 |
| MS.gene74985.t1 | AT5G11150 | 36.364 | 187 | 96 | 3 | 5 | 189 | 2 | 167 | 4.83e-36 | 127 |
| MS.gene74985.t1 | AT2G25340 | 36.559 | 186 | 96 | 3 | 5 | 189 | 2 | 166 | 3.53e-34 | 122 |
| MS.gene74985.t1 | AT5G22360 | 32.620 | 187 | 103 | 3 | 5 | 189 | 2 | 167 | 1.93e-31 | 115 |
| MS.gene74985.t1 | AT3G24890 | 54.412 | 68 | 26 | 2 | 133 | 197 | 15 | 80 | 3.84e-15 | 70.1 |
| MS.gene74985.t1 | AT2G33120 | 82.051 | 39 | 7 | 0 | 153 | 191 | 52 | 90 | 8.37e-15 | 69.7 |
| MS.gene74985.t1 | AT3G24890 | 67.442 | 43 | 14 | 0 | 141 | 183 | 23 | 65 | 2.32e-14 | 66.6 |
| MS.gene74985.t1 | AT3G24890 | 67.442 | 43 | 14 | 0 | 141 | 183 | 23 | 65 | 2.32e-14 | 66.6 |
| MS.gene74985.t1 | AT3G24890 | 67.442 | 43 | 14 | 0 | 141 | 183 | 23 | 65 | 2.32e-14 | 66.6 |
| MS.gene74985.t1 | AT3G24890 | 67.442 | 43 | 14 | 0 | 141 | 183 | 23 | 65 | 2.32e-14 | 66.6 |
Find 59 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAATCTTGATAGAGAATT+TGG | 0.088044 | 1.3:+75919613 | MS.gene74985:CDS |
| TTATCTTAGTTATAATATTA+TGG | 0.161768 | 1.3:+75922140 | MS.gene74985:CDS |
| TGGGGAGAAGATTGAACTTT+TGG | 0.275778 | 1.3:+75921914 | MS.gene74985:CDS |
| ATCACAAGAATAAGTGTATT+TGG | 0.280428 | 1.3:-75917843 | None:intergenic |
| TATCTTAGTTATAATATTAT+GGG | 0.315233 | 1.3:+75922141 | MS.gene74985:CDS |
| GATAGTTTACTCATTTCTTC+AGG | 0.318737 | 1.3:-75919758 | None:intergenic |
| CTCCCACCATCAGCTTCATT+TGG | 0.335673 | 1.3:-75922108 | None:intergenic |
| GTTATGCAGGCCAAGTCTTA+AGG | 0.350766 | 1.3:+75919709 | MS.gene74985:intron |
| TGCTAAAACAACAGTTCCTT+TGG | 0.361705 | 1.3:-75917747 | None:intergenic |
| AACGGAAAACTTGCAGTTCC+AGG | 0.368337 | 1.3:+75921944 | MS.gene74985:CDS |
| GCAGAACATACTCAATATAC+TGG | 0.382797 | 1.3:+75917767 | MS.gene74985:CDS |
| TTAGCTGCCTGCCCTGCCTC+TGG | 0.383925 | 1.3:-75922060 | None:intergenic |
| GGCTGACAGCTTCCAGAGGC+AGG | 0.400419 | 1.3:+75922048 | MS.gene74985:intron |
| ACAATCTTGATAGAGAATTT+GGG | 0.414431 | 1.3:+75919614 | MS.gene74985:CDS |
| TTCAATTTCCTCTTAGACAA+TGG | 0.420582 | 1.3:+75917875 | MS.gene74985:CDS |
| TATTATGGGTTATTGCTTGT+GGG | 0.421870 | 1.3:+75922155 | MS.gene74985:CDS |
| ACAGCTTCCAGAGGCAGGGC+AGG | 0.424399 | 1.3:+75922053 | MS.gene74985:intron |
| GATGACTTTAACCAGCGTTA+TGG | 0.433674 | 1.3:+75919505 | MS.gene74985:CDS |
| TTATGCAGGCCAAGTCTTAA+GGG | 0.435187 | 1.3:+75919710 | MS.gene74985:intron |
| GGCAGGGCAGGCAGCTAAGA+AGG | 0.436079 | 1.3:+75922065 | MS.gene74985:CDS |
| TACCGAATCCATTGTCTAAG+AGG | 0.440698 | 1.3:-75917883 | None:intergenic |
| TTCCTCTTAGACAATGGATT+CGG | 0.441125 | 1.3:+75917881 | MS.gene74985:CDS |
| GAGTAAACTATCAAAGTTGA+AGG | 0.456658 | 1.3:+75919769 | MS.gene74985:CDS |
| GTGTATTTGGTGCTATTTGA+AGG | 0.464053 | 1.3:-75917830 | None:intergenic |
| GTTGTTGCTGATGAATCAAT+TGG | 0.466016 | 1.3:+75919445 | MS.gene74985:CDS |
| ATTATGGGTTATTGCTTGTG+GGG | 0.475053 | 1.3:+75922156 | MS.gene74985:CDS |
| GTTTACTCATTTCTTCAGGA+TGG | 0.480252 | 1.3:-75919754 | None:intergenic |
| ATATTATGGGTTATTGCTTG+TGG | 0.493605 | 1.3:+75922154 | MS.gene74985:CDS |
| GGCTCAAATAACTGAGGTCA+AGG | 0.502250 | 1.3:+75919790 | MS.gene74985:CDS |
| TTTACTCATTTCTTCAGGAT+GGG | 0.513008 | 1.3:-75919753 | None:intergenic |
| TTATGGGTTATTGCTTGTGG+GGG | 0.536160 | 1.3:+75922157 | MS.gene74985:CDS |
| ATTGTCTAAGAGGAAATTGA+AGG | 0.538133 | 1.3:-75917873 | None:intergenic |
| AAATACACTTATTCTTGTGA+TGG | 0.544278 | 1.3:+75917845 | MS.gene74985:CDS |
| CTCAAATAACTGAGGTCAAG+GGG | 0.547294 | 1.3:+75919792 | MS.gene74985:CDS |
| ATATATAGCTTTGTTGCCAA+AGG | 0.547808 | 1.3:+75917731 | MS.gene74985:CDS |
| TGCATATGCCCCTTAAGACT+TGG | 0.551661 | 1.3:-75919719 | None:intergenic |
| CATCATCATCGGCAAGTGGA+TGG | 0.552635 | 1.3:-75919552 | None:intergenic |
| ATGAAGCTGATGGTGGGAGG+AGG | 0.554494 | 1.3:+75922112 | MS.gene74985:CDS |
| TGAGGTCAAGGGGATAATGA+TGG | 0.556128 | 1.3:+75919802 | MS.gene74985:CDS |
| ATCATCGTCCTCATCATCAT+CGG | 0.586609 | 1.3:-75919563 | None:intergenic |
| ATTCAAGCATTGAACAGCAA+TGG | 0.590197 | 1.3:-75917801 | None:intergenic |
| GCTCAAATAACTGAGGTCAA+GGG | 0.590488 | 1.3:+75919791 | MS.gene74985:CDS |
| CTCCAAATGAAGCTGATGGT+GGG | 0.596961 | 1.3:+75922106 | MS.gene74985:CDS |
| TCCTCATCATCATCGGCAAG+TGG | 0.601763 | 1.3:-75919556 | None:intergenic |
| AATGATGGATAATATTGAGA+AGG | 0.603558 | 1.3:+75919817 | MS.gene74985:CDS |
| TCTCCAAATGAAGCTGATGG+TGG | 0.603558 | 1.3:+75922105 | MS.gene74985:CDS |
| TAATACTAGCACCATAACGC+TGG | 0.607184 | 1.3:-75919516 | None:intergenic |
| TCCACTTGCCGATGATGATG+AGG | 0.607967 | 1.3:+75919555 | MS.gene74985:CDS |
| TTTGAAGGTGTTGGATCGTG+GGG | 0.608778 | 1.3:+75921896 | MS.gene74985:intron |
| GCTGACAGCTTCCAGAGGCA+GGG | 0.612920 | 1.3:+75922049 | MS.gene74985:intron |
| TATGCAGGCCAAGTCTTAAG+GGG | 0.622221 | 1.3:+75919711 | MS.gene74985:intron |
| GGCAGCTAAGAAGGAAGATG+TGG | 0.627425 | 1.3:+75922074 | MS.gene74985:CDS |
| TTGCTGATGAATCAATTGGA+AGG | 0.631302 | 1.3:+75919449 | MS.gene74985:CDS |
| TTGATTCATCAGCAACAACA+AGG | 0.631330 | 1.3:-75919441 | None:intergenic |
| TTTGTGAGAATGAGTCAAAG+GGG | 0.636577 | 1.3:+75917704 | None:intergenic |
| CAAATGAAGCTGATGGTGGG+AGG | 0.647708 | 1.3:+75922109 | MS.gene74985:CDS |
| GAATCTCCAAATGAAGCTGA+TGG | 0.655894 | 1.3:+75922102 | MS.gene74985:CDS |
| TTTAGGCTGACAGCTTCCAG+AGG | 0.685949 | 1.3:+75922044 | MS.gene74985:intron |
| GTTGAAGGCTCAAATAACTG+AGG | 0.694430 | 1.3:+75919784 | MS.gene74985:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTGAAAAAAATATATATT+GGG | + | chr1.3:75918196-75918215 | MS.gene74985:intron | 10.0% |
| !! | TATCTTAGTTATAATATTAT+GGG | + | chr1.3:75922141-75922160 | MS.gene74985:CDS | 10.0% |
| !! | TTATCTTAGTTATAATATTA+TGG | + | chr1.3:75922140-75922159 | MS.gene74985:CDS | 10.0% |
| !! | AACAAAATATAATCTTTCAA+CGG | - | chr1.3:75919082-75919101 | None:intergenic | 15.0% |
| !! | ATTTATTTGCGTTAAAATTT+AGG | + | chr1.3:75922027-75922046 | MS.gene74985:intron | 15.0% |
| !! | CACTTGAAAAAAATATATAT+TGG | + | chr1.3:75918195-75918214 | MS.gene74985:intron | 15.0% |
| !! | CTGAAGAATATAATTATATA+AGG | - | chr1.3:75920581-75920600 | None:intergenic | 15.0% |
| !! | TGAAACATAAATCATATATA+CGG | - | chr1.3:75921772-75921791 | None:intergenic | 15.0% |
| !!! | AAAAATGATTTAGGTTTAAA+TGG | + | chr1.3:75920385-75920404 | MS.gene74985:intron | 15.0% |
| !!! | AATTTTTCTTTTGGTTAAAT+TGG | + | chr1.3:75921635-75921654 | MS.gene74985:intron | 15.0% |
| !!! | ATATTTTATGAGTAATCAAA+AGG | - | chr1.3:75921551-75921570 | None:intergenic | 15.0% |
| !!! | ATTTTTCTTTTGGTTAAATT+GGG | + | chr1.3:75921636-75921655 | MS.gene74985:intron | 15.0% |
| !!! | TCAAAAAAAAATTAGTTTCT+AGG | + | chr1.3:75918710-75918729 | MS.gene74985:intron | 15.0% |
| !!! | TTAAACCTAAATCATTTTTA+CGG | - | chr1.3:75920384-75920403 | None:intergenic | 15.0% |
| !!! | TTATAACGATTTGTTTTTTT+TGG | - | chr1.3:75919321-75919340 | None:intergenic | 15.0% |
| !! | AAAATAGTAGGATTCTTTAT+TGG | + | chr1.3:75918854-75918873 | MS.gene74985:intron | 20.0% |
| !! | AATAATGTAAATGTTTGATG+TGG | - | chr1.3:75918887-75918906 | None:intergenic | 20.0% |
| !! | ATAAAACCTTCCAAAAAAAT+TGG | - | chr1.3:75921107-75921126 | None:intergenic | 20.0% |
| !! | ATGTTGTTAAATATAAGAGA+AGG | - | chr1.3:75921411-75921430 | None:intergenic | 20.0% |
| !! | ATTCTAATTTAAGTATCCAA+CGG | - | chr1.3:75921683-75921702 | None:intergenic | 20.0% |
| !! | ATTGTCTTTATCTTTATAAC+AGG | + | chr1.3:75921384-75921403 | MS.gene74985:intron | 20.0% |
| !! | GATGAAATATAATCTTTCAA+CGG | - | chr1.3:75919049-75919068 | None:intergenic | 20.0% |
| !! | TAGCTAATAAAAATTGACAT+GGG | + | chr1.3:75921190-75921209 | MS.gene74985:intron | 20.0% |
| !!! | AACTGTGATAATTTTTCTTT+TGG | + | chr1.3:75921626-75921645 | MS.gene74985:intron | 20.0% |
| !!! | CTGCATAAATAATAGTTTTT+AGG | + | chr1.3:75918677-75918696 | MS.gene74985:intron | 20.0% |
| !!! | TATAGTAAGTTTTTGTTGTT+TGG | + | chr1.3:75917986-75918005 | MS.gene74985:intron | 20.0% |
| !!! | TTACTATTCTAGTTTTCTTT+AGG | + | chr1.3:75920623-75920642 | MS.gene74985:intron | 20.0% |
| !!! | TTTTTTTCAAGTGTGTTAAT+CGG | - | chr1.3:75918188-75918207 | None:intergenic | 20.0% |
| ! | AAATACACTTATTCTTGTGA+TGG | + | chr1.3:75917845-75917864 | MS.gene74985:CDS | 25.0% |
| ! | AAGAGAGATAATGAAAAAAC+AGG | + | chr1.3:75918243-75918262 | MS.gene74985:intron | 25.0% |
| ! | ACAAGAAAACATAAGATTGT+AGG | - | chr1.3:75918283-75918302 | None:intergenic | 25.0% |
| ! | ACAATCTTGATAGAGAATTT+GGG | + | chr1.3:75919614-75919633 | MS.gene74985:CDS | 25.0% |
| ! | ACATATTCAGTAGGTTATTT+GGG | - | chr1.3:75918971-75918990 | None:intergenic | 25.0% |
| ! | AGAGAGATAATGAAAAAACA+GGG | + | chr1.3:75918244-75918263 | MS.gene74985:intron | 25.0% |
| ! | AGATTGTCTTAATAATCATC+CGG | - | chr1.3:75921723-75921742 | None:intergenic | 25.0% |
| ! | AGGAGAATATATTAGATAGA+AGG | + | chr1.3:75920303-75920322 | MS.gene74985:intron | 25.0% |
| ! | ATCACAAGAATAAGTGTATT+TGG | - | chr1.3:75917846-75917865 | None:intergenic | 25.0% |
| ! | ATCCCTTGTATATCATTTAA+AGG | - | chr1.3:75919987-75920006 | None:intergenic | 25.0% |
| ! | ATTGTTGTGTATGCTAATAT+GGG | + | chr1.3:75918493-75918512 | MS.gene74985:intron | 25.0% |
| ! | CAAAAACAAAAGAAGATAGA+AGG | + | chr1.3:75918380-75918399 | MS.gene74985:intron | 25.0% |
| ! | CTAGCTAATAAAAATTGACA+TGG | + | chr1.3:75921189-75921208 | MS.gene74985:intron | 25.0% |
| ! | TAAAAAACGCTATAATTGCA+GGG | - | chr1.3:75917959-75917978 | None:intergenic | 25.0% |
| ! | TACAATCTTGATAGAGAATT+TGG | + | chr1.3:75919613-75919632 | MS.gene74985:CDS | 25.0% |
| ! | TACATATTCAGTAGGTTATT+TGG | - | chr1.3:75918972-75918991 | None:intergenic | 25.0% |
| ! | TGCCTTTAAATGATATACAA+GGG | + | chr1.3:75919982-75920001 | MS.gene74985:intron | 25.0% |
| ! | TTCTAATTTAAGTATCCAAC+GGG | - | chr1.3:75921682-75921701 | None:intergenic | 25.0% |
| ! | TTGCCTTTAAATGATATACA+AGG | + | chr1.3:75919981-75920000 | MS.gene74985:intron | 25.0% |
| ! | TTTGGATAATAGTTAATACC+TGG | - | chr1.3:75921965-75921984 | None:intergenic | 25.0% |
| !! | ACATAACATACTTTTGGATT+AGG | + | chr1.3:75918531-75918550 | MS.gene74985:intron | 25.0% |
| !! | ATCTCTAAAAATTTGACCAA+AGG | + | chr1.3:75918739-75918758 | MS.gene74985:intron | 25.0% |
| !! | CATAACATACTTTTGGATTA+GGG | + | chr1.3:75918532-75918551 | MS.gene74985:intron | 25.0% |
| !! | CATTTCAACTTTTGATGTTT+AGG | + | chr1.3:75921238-75921257 | MS.gene74985:intron | 25.0% |
| !! | TAATCCAAAAGTATGTTATG+TGG | - | chr1.3:75918532-75918551 | None:intergenic | 25.0% |
| !! | TTATATGCATGCATTTTCTA+AGG | + | chr1.3:75920698-75920717 | MS.gene74985:intron | 25.0% |
| !! | TTTTGTGAACAAACCATATT+AGG | + | chr1.3:75918470-75918489 | MS.gene74985:intron | 25.0% |
| !!! | AATGATGGATAATATTGAGA+AGG | + | chr1.3:75919817-75919836 | MS.gene74985:CDS | 25.0% |
| !!! | ATAACATACTTTTGGATTAG+GGG | + | chr1.3:75918533-75918552 | MS.gene74985:intron | 25.0% |
| !!! | GAGAAATCTTTCACTTTTTT+TGG | + | chr1.3:75920784-75920803 | MS.gene74985:intron | 25.0% |
| !!! | TGTATTTTGATTATGCTTTC+TGG | + | chr1.3:75920042-75920061 | MS.gene74985:intron | 25.0% |
| !!! | TTAATTGGAGCCAATTTTTT+TGG | + | chr1.3:75921094-75921113 | MS.gene74985:intron | 25.0% |
| !!! | TTATGTTTCAGTTTTAAACC+AGG | + | chr1.3:75921782-75921801 | MS.gene74985:intron | 25.0% |
| AAAAAATAGAGGACTTTGAG+AGG | - | chr1.3:75920987-75921006 | None:intergenic | 30.0% | |
| AAAAAGTAAAACACCACCTT+TGG | - | chr1.3:75918758-75918777 | None:intergenic | 30.0% | |
| AACAGTATTGTTTCAGAGTT+CGG | - | chr1.3:75921999-75922018 | None:intergenic | 30.0% | |
| AAGCAAATCTTATAAAGCCA+TGG | - | chr1.3:75921471-75921490 | None:intergenic | 30.0% | |
| ACAATTTCAAACATAGCTAG+AGG | - | chr1.3:75921369-75921388 | None:intergenic | 30.0% | |
| ACCTAGTTTGGAAAAAACTT+TGG | + | chr1.3:75920159-75920178 | MS.gene74985:intron | 30.0% | |
| AGAGAATCCTTCTAATTTGA+AGG | - | chr1.3:75920930-75920949 | None:intergenic | 30.0% | |
| ATAGATGAATTCGAGTACTT+TGG | + | chr1.3:75918579-75918598 | MS.gene74985:intron | 30.0% | |
| ATATTAGATAGAAGGTAGTC+TGG | + | chr1.3:75920311-75920330 | MS.gene74985:intron | 30.0% | |
| ATTGTCTAAGAGGAAATTGA+AGG | - | chr1.3:75917876-75917895 | None:intergenic | 30.0% | |
| CATACACAACAATCCTAATA+TGG | - | chr1.3:75918486-75918505 | None:intergenic | 30.0% | |
| CCAAACCGTAAAAATGATTT+AGG | + | chr1.3:75920376-75920395 | MS.gene74985:intron | 30.0% | |
| CGATAAACAATGACATCATT+TGG | + | chr1.3:75920119-75920138 | MS.gene74985:intron | 30.0% | |
| CTAAAAAACGCTATAATTGC+AGG | - | chr1.3:75917960-75917979 | None:intergenic | 30.0% | |
| GAGAGATAATGAAAAAACAG+GGG | + | chr1.3:75918245-75918264 | MS.gene74985:intron | 30.0% | |
| GAGTAAACTATCAAAGTTGA+AGG | + | chr1.3:75919769-75919788 | MS.gene74985:CDS | 30.0% | |
| GATAGTTTACTCATTTCTTC+AGG | - | chr1.3:75919761-75919780 | None:intergenic | 30.0% | |
| GATTGTTGTGTATGCTAATA+TGG | + | chr1.3:75918492-75918511 | MS.gene74985:intron | 30.0% | |
| GTAAATGTTTGATGTGGATT+CGG | - | chr1.3:75918881-75918900 | None:intergenic | 30.0% | |
| GTGCTTTATATTCAGAAACA+TGG | - | chr1.3:75921850-75921869 | None:intergenic | 30.0% | |
| TAGTTTGGAAAAAACTTTGG+TGG | + | chr1.3:75920162-75920181 | MS.gene74985:intron | 30.0% | |
| TCATTTCAAGAAGTTACGAA+AGG | + | chr1.3:75920545-75920564 | MS.gene74985:intron | 30.0% | |
| TCTAAAAATTTGACCAAAGG+TGG | + | chr1.3:75918742-75918761 | MS.gene74985:intron | 30.0% | |
| TGGTTATGATATTCTTACCT+GGG | + | chr1.3:75920182-75920201 | MS.gene74985:intron | 30.0% | |
| TTATGTCACATGTGAATTTG+CGG | + | chr1.3:75919189-75919208 | MS.gene74985:intron | 30.0% | |
| TTCAATTTCCTCTTAGACAA+TGG | + | chr1.3:75917875-75917894 | MS.gene74985:CDS | 30.0% | |
| TTTACTCATTTCTTCAGGAT+GGG | - | chr1.3:75919756-75919775 | None:intergenic | 30.0% | |
| ! | AAAAATAGAGGACTTTGAGA+GGG | - | chr1.3:75920986-75921005 | None:intergenic | 30.0% |
| ! | AAATGCATGAGTGTGTTATT+AGG | - | chr1.3:75919849-75919868 | None:intergenic | 30.0% |
| ! | AAATGTTTTCTTCTGATTCC+TGG | - | chr1.3:75921803-75921822 | None:intergenic | 30.0% |
| ! | ATATAGAAGCTTTTCCCATT+AGG | - | chr1.3:75920470-75920489 | None:intergenic | 30.0% |
| ! | ATATTATGGGTTATTGCTTG+TGG | + | chr1.3:75922154-75922173 | MS.gene74985:CDS | 30.0% |
| ! | GTATACTTTAGCTTAAAACC+AGG | + | chr1.3:75920243-75920262 | MS.gene74985:intron | 30.0% |
| ! | TATTATGGGTTATTGCTTGT+GGG | + | chr1.3:75922155-75922174 | MS.gene74985:CDS | 30.0% |
| !! | ATATATAGCTTTGTTGCCAA+AGG | + | chr1.3:75917731-75917750 | MS.gene74985:CDS | 30.0% |
| !! | ATGGCTTTATAAGATTTGCT+TGG | + | chr1.3:75921470-75921489 | MS.gene74985:intron | 30.0% |
| !! | CCTAAATCATTTTTACGGTT+TGG | - | chr1.3:75920379-75920398 | None:intergenic | 30.0% |
| !! | TAAGAGTGTTTAGATGTGTA+TGG | + | chr1.3:75920075-75920094 | MS.gene74985:intron | 30.0% |
| !! | TGAACTTTTGGTGGATAAAA+CGG | + | chr1.3:75921926-75921945 | MS.gene74985:CDS | 30.0% |
| !! | TGGCTTTATAAGATTTGCTT+GGG | + | chr1.3:75921471-75921490 | MS.gene74985:intron | 30.0% |
| !! | TTTTGATTATGCTTTCTGGT+TGG | + | chr1.3:75920046-75920065 | MS.gene74985:intron | 30.0% |
| !!! | AAAGTTTTTTCCAAACTAGG+TGG | - | chr1.3:75920160-75920179 | None:intergenic | 30.0% |
| !!! | ACCAAAGTTTTTTCCAAACT+AGG | - | chr1.3:75920163-75920182 | None:intergenic | 30.0% |
| !!! | CATTTTCTAAGGCATTGTTT+GGG | + | chr1.3:75920709-75920728 | MS.gene74985:intron | 30.0% |
| !!! | GGTTTTAAGCTAAAGTATAC+TGG | - | chr1.3:75920243-75920262 | None:intergenic | 30.0% |
| !!! | TTCCTTTTGTGTTTTTGGAA+CGG | + | chr1.3:75919476-75919495 | MS.gene74985:CDS | 30.0% |
| AAGATAGGCCAAGAATTTAC+AGG | + | chr1.3:75920345-75920364 | MS.gene74985:intron | 35.0% | |
| AATTTGAAGGAGCTCGTATA+GGG | - | chr1.3:75920917-75920936 | None:intergenic | 35.0% | |
| AGACGGAACTTTCTGTTAAT+TGG | + | chr1.3:75921079-75921098 | MS.gene74985:intron | 35.0% | |
| AGATAATGAAAAAACAGGGG+AGG | + | chr1.3:75918248-75918267 | MS.gene74985:intron | 35.0% | |
| AGTTCGGAAATGTTTGGATT+TGG | - | chr1.3:75921983-75922002 | None:intergenic | 35.0% | |
| ATATCAAAGCCAACTCAATG+AGG | - | chr1.3:75919008-75919027 | None:intergenic | 35.0% | |
| ATATCACTGGATCAACATGT+AGG | + | chr1.3:75921288-75921307 | MS.gene74985:intron | 35.0% | |
| ATCACAGTTAAAACCTCTGT+TGG | - | chr1.3:75921615-75921634 | None:intergenic | 35.0% | |
| CAACAGTCTTCAAATTTGCA+GGG | - | chr1.3:75918019-75918038 | None:intergenic | 35.0% | |
| CTTATGATACTCTATCGTCT+TGG | - | chr1.3:75920285-75920304 | None:intergenic | 35.0% | |
| CTTTGGACACTTTAGGTAAA+AGG | + | chr1.3:75918596-75918615 | MS.gene74985:intron | 35.0% | |
| GCAGAACATACTCAATATAC+TGG | + | chr1.3:75917767-75917786 | MS.gene74985:CDS | 35.0% | |
| GGTTAGTGACATGAATCAAA+TGG | - | chr1.3:75920444-75920463 | None:intergenic | 35.0% | |
| GGTTATGATATTCTTACCTG+GGG | + | chr1.3:75920183-75920202 | MS.gene74985:intron | 35.0% | |
| GTCACATGGCATGATTATAT+GGG | - | chr1.3:75918068-75918087 | None:intergenic | 35.0% | |
| GTGGTTATGATATTCTTACC+TGG | + | chr1.3:75920181-75920200 | MS.gene74985:intron | 35.0% | |
| GTTATGATATTCTTACCTGG+GGG | + | chr1.3:75920184-75920203 | MS.gene74985:intron | 35.0% | |
| GTTGTTGCTGATGAATCAAT+TGG | + | chr1.3:75919445-75919464 | MS.gene74985:CDS | 35.0% | |
| GTTTACTCATTTCTTCAGGA+TGG | - | chr1.3:75919757-75919776 | None:intergenic | 35.0% | |
| TAATTTGAAGGAGCTCGTAT+AGG | - | chr1.3:75920918-75920937 | None:intergenic | 35.0% | |
| TCACATGGCATGATTATATG+GGG | - | chr1.3:75918067-75918086 | None:intergenic | 35.0% | |
| TCTTGATAGAGAATTTGGGT+TGG | + | chr1.3:75919618-75919637 | MS.gene74985:intron | 35.0% | |
| TGCTAAAACAACAGTTCCTT+TGG | - | chr1.3:75917750-75917769 | None:intergenic | 35.0% | |
| TTAAATTGGGATACTGCAGA+GGG | + | chr1.3:75921649-75921668 | MS.gene74985:intron | 35.0% | |
| TTATGATATTCTTACCTGGG+GGG | + | chr1.3:75920185-75920204 | MS.gene74985:intron | 35.0% | |
| TTGATTCATCAGCAACAACA+AGG | - | chr1.3:75919444-75919463 | None:intergenic | 35.0% | |
| TTGCTGATGAATCAATTGGA+AGG | + | chr1.3:75919449-75919468 | MS.gene74985:CDS | 35.0% | |
| TTTCAGAGTTCGGAAATGTT+TGG | - | chr1.3:75921989-75922008 | None:intergenic | 35.0% | |
| ! | AAAAAGAGAAACAGAAGTGC+AGG | + | chr1.3:75918419-75918438 | MS.gene74985:intron | 35.0% |
| ! | AAAATAGAGGACTTTGAGAG+GGG | - | chr1.3:75920985-75921004 | None:intergenic | 35.0% |
| ! | AAGAAATTATCGATTGAGCC+CGG | - | chr1.3:75918144-75918163 | None:intergenic | 35.0% |
| ! | AGGTGCAACACTAATTTTTC+AGG | - | chr1.3:75918315-75918334 | None:intergenic | 35.0% |
| ! | ATTATGGGTTATTGCTTGTG+GGG | + | chr1.3:75922156-75922175 | MS.gene74985:CDS | 35.0% |
| ! | CAAGACGATAGAGTATCATA+AGG | + | chr1.3:75920283-75920302 | MS.gene74985:intron | 35.0% |
| ! | GAGTGTTCCTTTTGTGTTTT+TGG | + | chr1.3:75919471-75919490 | MS.gene74985:CDS | 35.0% |
| ! | GATGTTTAGGCATACTGATT+AGG | + | chr1.3:75921251-75921270 | MS.gene74985:intron | 35.0% |
| ! | GGTGCAACACTAATTTTTCA+GGG | - | chr1.3:75918314-75918333 | None:intergenic | 35.0% |
| ! | TAGGCATACTGATTAGGATT+TGG | + | chr1.3:75921257-75921276 | MS.gene74985:intron | 35.0% |
| ! | TTCCTCTTAGACAATGGATT+CGG | + | chr1.3:75917881-75917900 | MS.gene74985:CDS | 35.0% |
| !! | ATACTACCTAGTCTTATGTC+TGG | + | chr1.3:75919933-75919952 | MS.gene74985:intron | 35.0% |
| !! | ATTCAAGCATTGAACAGCAA+TGG | - | chr1.3:75917804-75917823 | None:intergenic | 35.0% |
| !! | GTGCAACACTAATTTTTCAG+GGG | - | chr1.3:75918313-75918332 | None:intergenic | 35.0% |
| !! | GTGTATTTGGTGCTATTTGA+AGG | - | chr1.3:75917833-75917852 | None:intergenic | 35.0% |
| !! | TGAGTTGGCTTTGATATTGT+CGG | + | chr1.3:75919011-75919030 | MS.gene74985:intron | 35.0% |
| !! | TTTAGTTCTGTCGTCATACA+CGG | + | chr1.3:75918041-75918060 | MS.gene74985:intron | 35.0% |
| !!! | GCATTTTCTAAGGCATTGTT+TGG | + | chr1.3:75920708-75920727 | MS.gene74985:intron | 35.0% |
| !!! | GTATTTTGATCTCGTTATGC+AGG | + | chr1.3:75919696-75919715 | MS.gene74985:intron | 35.0% |
| !!! | TCCTTTTGTGTTTTTGGAAC+GGG | + | chr1.3:75919477-75919496 | MS.gene74985:CDS | 35.0% |
| !!! | TGCAACACTAATTTTTCAGG+GGG | - | chr1.3:75918312-75918331 | None:intergenic | 35.0% |
| !!! | TTGGAGCCAATTTTTTTGGA+AGG | + | chr1.3:75921098-75921117 | MS.gene74985:intron | 35.0% |
| AATCTTATAAAGCCATGGCC+TGG | - | chr1.3:75921466-75921485 | None:intergenic | 40.0% | |
| AATCTTCATCTAGTCCCACT+CGG | - | chr1.3:75920666-75920685 | None:intergenic | 40.0% | |
| ACAGAAAGTTCCGTCTCTTT+AGG | - | chr1.3:75921075-75921094 | None:intergenic | 40.0% | |
| ACCCGTTCCAAAAACACAAA+AGG | - | chr1.3:75919481-75919500 | None:intergenic | 40.0% | |
| ACGAGCTCCTTCAAATTAGA+AGG | + | chr1.3:75920920-75920939 | MS.gene74985:intron | 40.0% | |
| AGACCCTAAATCAGCTCATT+GGG | - | chr1.3:75919263-75919282 | None:intergenic | 40.0% | |
| ATCATCGTCCTCATCATCAT+CGG | - | chr1.3:75919566-75919585 | None:intergenic | 40.0% | |
| ATTTACTAGATCTGCTGCCA+TGG | + | chr1.3:75919381-75919400 | MS.gene74985:intron | 40.0% | |
| ATTTGAAGGAGCTCGTATAG+GGG | - | chr1.3:75920916-75920935 | None:intergenic | 40.0% | |
| CACATGTTATGTAACAGCCA+TGG | - | chr1.3:75919401-75919420 | None:intergenic | 40.0% | |
| CGCTTGATCCTGTAAATTCT+TGG | - | chr1.3:75920356-75920375 | None:intergenic | 40.0% | |
| CGTCACATGGCATGATTATA+TGG | - | chr1.3:75918069-75918088 | None:intergenic | 40.0% | |
| CTAATCAACTCCACCTAGTT+TGG | + | chr1.3:75920147-75920166 | MS.gene74985:intron | 40.0% | |
| CTCAAATAACTGAGGTCAAG+GGG | + | chr1.3:75919792-75919811 | MS.gene74985:CDS | 40.0% | |
| GAATCTCCAAATGAAGCTGA+TGG | + | chr1.3:75922102-75922121 | MS.gene74985:CDS | 40.0% | |
| GATGACTTTAACCAGCGTTA+TGG | + | chr1.3:75919505-75919524 | MS.gene74985:CDS | 40.0% | |
| GCAAACAAAGCCTAAAGAGA+CGG | + | chr1.3:75921062-75921081 | MS.gene74985:intron | 40.0% | |
| GCAACAGTCTTCAAATTTGC+AGG | - | chr1.3:75918020-75918039 | None:intergenic | 40.0% | |
| GCATGCATATAATGCTCAAC+TGG | - | chr1.3:75920690-75920709 | None:intergenic | 40.0% | |
| GCTCAAATAACTGAGGTCAA+GGG | + | chr1.3:75919791-75919810 | MS.gene74985:CDS | 40.0% | |
| GGAGCAAGTGGAAAAAATAG+AGG | - | chr1.3:75920998-75921017 | None:intergenic | 40.0% | |
| GTGTATGCTAATATGGGCTT+GGG | + | chr1.3:75918499-75918518 | MS.gene74985:intron | 40.0% | |
| GTTAAATTGGGATACTGCAG+AGG | + | chr1.3:75921648-75921667 | MS.gene74985:intron | 40.0% | |
| GTTGAAGGCTCAAATAACTG+AGG | + | chr1.3:75919784-75919803 | MS.gene74985:CDS | 40.0% | |
| TAATACTAGCACCATAACGC+TGG | - | chr1.3:75919519-75919538 | None:intergenic | 40.0% | |
| TACCGAATCCATTGTCTAAG+AGG | - | chr1.3:75917886-75917905 | None:intergenic | 40.0% | |
| TAGACCCTAAATCAGCTCAT+TGG | - | chr1.3:75919264-75919283 | None:intergenic | 40.0% | |
| TCGAGTACTTTGGACACTTT+AGG | + | chr1.3:75918589-75918608 | MS.gene74985:intron | 40.0% | |
| TGTGTATGCTAATATGGGCT+TGG | + | chr1.3:75918498-75918517 | MS.gene74985:intron | 40.0% | |
| TGTTGATCCAGTGATATGAG+AGG | - | chr1.3:75921285-75921304 | None:intergenic | 40.0% | |
| TTATGCAGGCCAAGTCTTAA+GGG | + | chr1.3:75919710-75919729 | MS.gene74985:intron | 40.0% | |
| TTTGGATCCTCTCATATCAC+TGG | + | chr1.3:75921275-75921294 | MS.gene74985:intron | 40.0% | |
| ! | AAAGTATCCAGCCATGATGA+AGG | + | chr1.3:75921342-75921361 | MS.gene74985:intron | 40.0% |
| ! | ACTAGGTGGAGTTGATTAGA+TGG | - | chr1.3:75920146-75920165 | None:intergenic | 40.0% |
| ! | AGAAATTATCGATTGAGCCC+GGG | - | chr1.3:75918143-75918162 | None:intergenic | 40.0% |
| ! | AGAAGCTTTTCCCATTAGGT+CGG | - | chr1.3:75920466-75920485 | None:intergenic | 40.0% |
| ! | ATGTTTTCAGCGCTAATGCT+TGG | + | chr1.3:75919905-75919924 | MS.gene74985:intron | 40.0% |
| ! | CAAGTGTGTTAATCGGCTTT+GGG | - | chr1.3:75918181-75918200 | None:intergenic | 40.0% |
| ! | CCAACTCAATGAGGTTTGTT+GGG | - | chr1.3:75918999-75919018 | None:intergenic | 40.0% |
| ! | GGAGAAGATTGAACTTTTGG+TGG | + | chr1.3:75921917-75921936 | MS.gene74985:CDS | 40.0% |
| ! | TCAAGTGTGTTAATCGGCTT+TGG | - | chr1.3:75918182-75918201 | None:intergenic | 40.0% |
| ! | TGGGCCACATAACATACTTT+TGG | + | chr1.3:75918525-75918544 | MS.gene74985:intron | 40.0% |
| ! | TGGGGAGAAGATTGAACTTT+TGG | + | chr1.3:75921914-75921933 | MS.gene74985:CDS | 40.0% |
| ! | TGGGGGTATACATATTCAGT+AGG | - | chr1.3:75918980-75918999 | None:intergenic | 40.0% |
| ! | TTATGGGTTATTGCTTGTGG+GGG | + | chr1.3:75922157-75922176 | MS.gene74985:CDS | 40.0% |
| !! | AACTCAATGAGGTTTGTTGG+GGG | - | chr1.3:75918997-75919016 | None:intergenic | 40.0% |
| !! | ATTTGCACTCGTCGTTTTGA+AGG | + | chr1.3:75921881-75921900 | MS.gene74985:intron | 40.0% |
| !! | CAACTCAATGAGGTTTGTTG+GGG | - | chr1.3:75918998-75919017 | None:intergenic | 40.0% |
| !! | GTCTCTTTAGGCTTTGTTTG+CGG | - | chr1.3:75921063-75921082 | None:intergenic | 40.0% |
| !! | TAAGGCATTGTTTGGGAGTT+TGG | + | chr1.3:75920716-75920735 | MS.gene74985:intron | 40.0% |
| !! | TCTCTTTAGGCTTTGTTTGC+GGG | - | chr1.3:75921062-75921081 | None:intergenic | 40.0% |
| !!! | TTTTGAAGGTGTTGGATCGT+GGG | + | chr1.3:75921895-75921914 | MS.gene74985:intron | 40.0% |
| AACGGAAAACTTGCAGTTCC+AGG | + | chr1.3:75921944-75921963 | MS.gene74985:CDS | 45.0% | |
| ATCTTCATCTAGTCCCACTC+GGG | - | chr1.3:75920665-75920684 | None:intergenic | 45.0% | |
| ATGTCACTAACCCGACCTAA+TGG | + | chr1.3:75920452-75920471 | MS.gene74985:intron | 45.0% | |
| CATTGTTTGGGAGTTTGGAG+GGG | + | chr1.3:75920721-75920740 | MS.gene74985:intron | 45.0% | |
| CCCAACAAACCTCATTGAGT+TGG | + | chr1.3:75918996-75919015 | MS.gene74985:intron | 45.0% | |
| CTAATATGGGCTTGGGTCTT+GGG | + | chr1.3:75918506-75918525 | MS.gene74985:intron | 45.0% | |
| CTCCAAATGAAGCTGATGGT+GGG | + | chr1.3:75922106-75922125 | MS.gene74985:CDS | 45.0% | |
| CTGGAAGTTAGCGGTAAGAT+AGG | + | chr1.3:75920330-75920349 | MS.gene74985:intron | 45.0% | |
| GAAGGTAGTCTGGAAGTTAG+CGG | + | chr1.3:75920321-75920340 | MS.gene74985:intron | 45.0% | |
| GAGGGATTTGGGAAAAAGGA+AGG | - | chr1.3:75921019-75921038 | None:intergenic | 45.0% | |
| GCATTGTTTGGGAGTTTGGA+GGG | + | chr1.3:75920720-75920739 | MS.gene74985:intron | 45.0% | |
| GCCAACTCAATGAGGTTTGT+TGG | - | chr1.3:75919000-75919019 | None:intergenic | 45.0% | |
| GGACAAAGAAGAAGAAGGTG+TGG | + | chr1.3:75918440-75918459 | MS.gene74985:intron | 45.0% | |
| GGCTCAAATAACTGAGGTCA+AGG | + | chr1.3:75919790-75919809 | MS.gene74985:CDS | 45.0% | |
| GTGCAGGACAAAGAAGAAGA+AGG | + | chr1.3:75918435-75918454 | MS.gene74985:intron | 45.0% | |
| GTGCATCCAGACATAAGACT+AGG | - | chr1.3:75919942-75919961 | None:intergenic | 45.0% | |
| GTGTGTGAGAGAGAAACTCA+AGG | - | chr1.3:75918335-75918354 | None:intergenic | 45.0% | |
| GTTATGCAGGCCAAGTCTTA+AGG | + | chr1.3:75919709-75919728 | MS.gene74985:intron | 45.0% | |
| TAGCTAGAGGACCTTCATCA+TGG | - | chr1.3:75921356-75921375 | None:intergenic | 45.0% | |
| TATGCAGGCCAAGTCTTAAG+GGG | + | chr1.3:75919711-75919730 | MS.gene74985:intron | 45.0% | |
| TCGCGGTACATTCAATTCAG+TGG | - | chr1.3:75918947-75918966 | None:intergenic | 45.0% | |
| TCTCCAAATGAAGCTGATGG+TGG | + | chr1.3:75922105-75922124 | MS.gene74985:CDS | 45.0% | |
| TCTGACAGTTAGACCAACAG+AGG | + | chr1.3:75921599-75921618 | MS.gene74985:intron | 45.0% | |
| TGAGGTCAAGGGGATAATGA+TGG | + | chr1.3:75919802-75919821 | MS.gene74985:CDS | 45.0% | |
| TGCATATGCCCCTTAAGACT+TGG | - | chr1.3:75919722-75919741 | None:intergenic | 45.0% | |
| TGTCACTAACCCGACCTAAT+GGG | + | chr1.3:75920453-75920472 | MS.gene74985:intron | 45.0% | |
| TGTGGGGGTGAAAACGTATA+GGG | + | chr1.3:75920754-75920773 | MS.gene74985:intron | 45.0% | |
| TTCAATTCAGTGGCGTATCC+AGG | - | chr1.3:75918937-75918956 | None:intergenic | 45.0% | |
| TTTGAAGGAGCTCGTATAGG+GGG | - | chr1.3:75920915-75920934 | None:intergenic | 45.0% | |
| ! | CAGTAGGTTATTTGGGTTCG+CGG | - | chr1.3:75918964-75918983 | None:intergenic | 45.0% |
| ! | CCAGGATTTTCATAGAGCCT+GGG | - | chr1.3:75919226-75919245 | None:intergenic | 45.0% |
| ! | GAAGCTTTTCCCATTAGGTC+GGG | - | chr1.3:75920465-75920484 | None:intergenic | 45.0% |
| ! | TGGCCCAATGAGCTGATTTA+GGG | + | chr1.3:75919257-75919276 | MS.gene74985:intron | 45.0% |
| !! | TTAGGCTTTGTTTGCGGGTT+TGG | - | chr1.3:75921057-75921076 | None:intergenic | 45.0% |
| !! | TTTGAAGGTGTTGGATCGTG+GGG | + | chr1.3:75921896-75921915 | MS.gene74985:intron | 45.0% |
| !!! | ACTCGTCGTTTTGAAGGTGT+TGG | + | chr1.3:75921887-75921906 | MS.gene74985:intron | 45.0% |
| !!! | GTTTTGAAGGTGTTGGATCG+TGG | + | chr1.3:75921894-75921913 | MS.gene74985:intron | 45.0% |
| !!! | TGTGTTTTTGGAACGGGTGA+AGG | + | chr1.3:75919483-75919502 | MS.gene74985:CDS | 45.0% |
| !!! | TTGCGGTAATTTTTTCGCCC+AGG | + | chr1.3:75919206-75919225 | MS.gene74985:intron | 45.0% |
| !! | TTAAAATTATTAAAAATAGT+AGG | + | chr1.3:75918842-75918861 | MS.gene74985:intron | 5.0% |
| !! | TTTACAATAATAAAAATTAA+TGG | + | chr1.3:75918799-75918818 | MS.gene74985:intron | 5.0% |
| ACTCCATTGAATTGCCCGAG+TGG | + | chr1.3:75920648-75920667 | MS.gene74985:intron | 50.0% | |
| ACTCGGGCAATTCAATGGAG+TGG | - | chr1.3:75920649-75920668 | None:intergenic | 50.0% | |
| CATCATCATCGGCAAGTGGA+TGG | - | chr1.3:75919555-75919574 | None:intergenic | 50.0% | |
| CATGTGCTAGTGTCTCTTCC+AGG | + | chr1.3:75921445-75921464 | MS.gene74985:intron | 50.0% | |
| CCCAGGCTCTATGAAAATCC+TGG | + | chr1.3:75919223-75919242 | MS.gene74985:intron | 50.0% | |
| CTCCATTGAATTGCCCGAGT+GGG | + | chr1.3:75920649-75920668 | MS.gene74985:intron | 50.0% | |
| CTCCCACCATCAGCTTCATT+TGG | - | chr1.3:75922111-75922130 | None:intergenic | 50.0% | |
| CTGGAAGAGACACTAGCACA+TGG | - | chr1.3:75921447-75921466 | None:intergenic | 50.0% | |
| CTGTGGGGGTGAAAACGTAT+AGG | + | chr1.3:75920753-75920772 | MS.gene74985:intron | 50.0% | |
| GAGACACTAGCACATGGATC+TGG | - | chr1.3:75921441-75921460 | None:intergenic | 50.0% | |
| GCTAATATGGGCTTGGGTCT+TGG | + | chr1.3:75918505-75918524 | MS.gene74985:intron | 50.0% | |
| GGCAGCTAAGAAGGAAGATG+TGG | + | chr1.3:75922074-75922093 | MS.gene74985:CDS | 50.0% | |
| GGCATTGTTTGGGAGTTTGG+AGG | + | chr1.3:75920719-75920738 | MS.gene74985:intron | 50.0% | |
| GGGAAAAAGGAAGGAGCAAG+TGG | - | chr1.3:75921010-75921029 | None:intergenic | 50.0% | |
| TAGAGGACCTTCATCATGGC+TGG | - | chr1.3:75921352-75921371 | None:intergenic | 50.0% | |
| TATTTCTCTACTGCACCCCC+TGG | + | chr1.3:75918903-75918922 | MS.gene74985:intron | 50.0% | |
| TCCTCATCATCATCGGCAAG+TGG | - | chr1.3:75919559-75919578 | None:intergenic | 50.0% | |
| TCTATCGTCTTGGCCACAAC+AGG | - | chr1.3:75920275-75920294 | None:intergenic | 50.0% | |
| TTTAGGCTGACAGCTTCCAG+AGG | + | chr1.3:75922044-75922063 | MS.gene74985:intron | 50.0% | |
| TTTGCGGGTTTGGAAGGCAA+TGG | - | chr1.3:75921047-75921066 | None:intergenic | 50.0% | |
| ! | ATAGAGGACTTTGAGAGGGG+AGG | - | chr1.3:75920982-75921001 | None:intergenic | 50.0% |
| ! | GCCAGGATTTTCATAGAGCC+TGG | - | chr1.3:75919227-75919246 | None:intergenic | 50.0% |
| ! | GTGGCCCAATGAGCTGATTT+AGG | + | chr1.3:75919256-75919275 | MS.gene74985:intron | 50.0% |
| ! | TAGAGGACTTTGAGAGGGGA+GGG | - | chr1.3:75920981-75921000 | None:intergenic | 50.0% |
| ! | TCCACTTGCCGATGATGATG+AGG | + | chr1.3:75919555-75919574 | MS.gene74985:CDS | 50.0% |
| !! | AACCAGGAAAGCACCTGTTG+TGG | + | chr1.3:75920259-75920278 | MS.gene74985:intron | 50.0% |
| !! | CAAATGAAGCTGATGGTGGG+AGG | + | chr1.3:75922109-75922128 | MS.gene74985:CDS | 50.0% |
| !! | GCTTTGTTTGCGGGTTTGGA+AGG | - | chr1.3:75921053-75921072 | None:intergenic | 50.0% |
| AAGGAGCTCGTATAGGGGGA+GGG | - | chr1.3:75920911-75920930 | None:intergenic | 55.0% | |
| ATCAGCTCATTGGGCCACAG+TGG | - | chr1.3:75919254-75919273 | None:intergenic | 55.0% | |
| ATTCTTACCTGGGGGGACTC+AGG | + | chr1.3:75920192-75920211 | MS.gene74985:intron | 55.0% | |
| CAATGGAGGGGGAGGGATTT+GGG | - | chr1.3:75921030-75921049 | None:intergenic | 55.0% | |
| CGGGTTTGGAAGGCAATGGA+GGG | - | chr1.3:75921043-75921062 | None:intergenic | 55.0% | |
| CTAGTGTCTCTTCCAGGCCA+TGG | + | chr1.3:75921451-75921470 | MS.gene74985:intron | 55.0% | |
| GGGGGAGGGATTTGGGAAAA+AGG | - | chr1.3:75921023-75921042 | None:intergenic | 55.0% | |
| GGGTTTGGAAGGCAATGGAG+GGG | - | chr1.3:75921042-75921061 | None:intergenic | 55.0% | |
| GGTTTGGAAGGCAATGGAGG+GGG | - | chr1.3:75921041-75921060 | None:intergenic | 55.0% | |
| GTCCCACTCGGGCAATTCAA+TGG | - | chr1.3:75920654-75920673 | None:intergenic | 55.0% | |
| TCATGCCATGTGACGCCACA+TGG | + | chr1.3:75918074-75918093 | MS.gene74985:intron | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+TGG | + | chr1.3:75920726-75920745 | MS.gene74985:intron | 55.0% | |
| ! | ACTTTGAGAGGGGAGGGCTT+TGG | - | chr1.3:75920975-75920994 | None:intergenic | 55.0% |
| ! | CTTTGAGAGGGGAGGGCTTT+GGG | - | chr1.3:75920974-75920993 | None:intergenic | 55.0% |
| ! | GAAGAAGAAGGTGTGGCGTC+TGG | + | chr1.3:75918447-75918466 | MS.gene74985:intron | 55.0% |
| !! | ATGAAGCTGATGGTGGGAGG+AGG | + | chr1.3:75922112-75922131 | MS.gene74985:CDS | 55.0% |
| AAATCCTGGCTCCGCCACTG+TGG | + | chr1.3:75919237-75919256 | MS.gene74985:intron | 60.0% | |
| AGCTCATTGGGCCACAGTGG+CGG | - | chr1.3:75919251-75919270 | None:intergenic | 60.0% | |
| GAAGGAGCTCGTATAGGGGG+AGG | - | chr1.3:75920912-75920931 | None:intergenic | 60.0% | |
| GCAATGGAGGGGGAGGGATT+TGG | - | chr1.3:75921031-75921050 | None:intergenic | 60.0% | |
| GCGGGTTTGGAAGGCAATGG+AGG | - | chr1.3:75921044-75921063 | None:intergenic | 60.0% | |
| GCGGTAGATCCGCCACTGTT+GGG | - | chr1.3:75918100-75918119 | None:intergenic | 60.0% | |
| GCTGACAGCTTCCAGAGGCA+GGG | + | chr1.3:75922049-75922068 | MS.gene74985:intron | 60.0% | |
| GGAGTTTGGAGGGGAGTGGA+GGG | + | chr1.3:75920730-75920749 | MS.gene74985:intron | 60.0% | |
| GGCCACAACAGGTGCTTTCC+TGG | - | chr1.3:75920264-75920283 | None:intergenic | 60.0% | |
| GTATCCAGGACCCTGGTCCA+GGG | - | chr1.3:75918923-75918942 | None:intergenic | 60.0% | |
| TATCCAGGACCCTGGTCCAG+GGG | - | chr1.3:75918922-75918941 | None:intergenic | 60.0% | |
| TGGAAGGCAATGGAGGGGGA+GGG | - | chr1.3:75921037-75921056 | None:intergenic | 60.0% | |
| TTGGAAGGCAATGGAGGGGG+AGG | - | chr1.3:75921038-75921057 | None:intergenic | 60.0% | |
| TTGGGCCATGTGGCGTCACA+TGG | - | chr1.3:75918082-75918101 | None:intergenic | 60.0% | |
| ACAGCTTCCAGAGGCAGGGC+AGG | + | chr1.3:75922053-75922072 | MS.gene74985:intron | 65.0% | |
| AGTGCTTCCTGAGTCCCCCC+AGG | - | chr1.3:75920202-75920221 | None:intergenic | 65.0% | |
| ATCCAGGACCCTGGTCCAGG+GGG | - | chr1.3:75918921-75918940 | None:intergenic | 65.0% | |
| CAGTGGCGTATCCAGGACCC+TGG | - | chr1.3:75918930-75918949 | None:intergenic | 65.0% | |
| CGTATCCAGGACCCTGGTCC+AGG | - | chr1.3:75918924-75918943 | None:intergenic | 65.0% | |
| CTACTGCACCCCCTGGACCA+GGG | + | chr1.3:75918910-75918929 | MS.gene74985:intron | 65.0% | |
| GACGCCACATGGCCCAACAG+TGG | + | chr1.3:75918085-75918104 | MS.gene74985:intron | 65.0% | |
| GCAGAGGGTCTGAGTCCCGT+TGG | + | chr1.3:75921664-75921683 | MS.gene74985:intron | 65.0% | |
| GCCACATGGCCCAACAGTGG+CGG | + | chr1.3:75918088-75918107 | MS.gene74985:intron | 65.0% | |
| GGCAGGGCAGGCAGCTAAGA+AGG | + | chr1.3:75922065-75922084 | MS.gene74985:CDS | 65.0% | |
| GGCGGTAGATCCGCCACTGT+TGG | - | chr1.3:75918101-75918120 | None:intergenic | 65.0% | |
| GGCTGACAGCTTCCAGAGGC+AGG | + | chr1.3:75922048-75922067 | MS.gene74985:intron | 65.0% | |
| GGGAGTTTGGAGGGGAGTGG+AGG | + | chr1.3:75920729-75920748 | MS.gene74985:intron | 65.0% | |
| TCCGCCACTGTTGGGCCATG+TGG | - | chr1.3:75918092-75918111 | None:intergenic | 65.0% | |
| TCTACTGCACCCCCTGGACC+AGG | + | chr1.3:75918909-75918928 | MS.gene74985:intron | 65.0% | |
| TTAGCTGCCTGCCCTGCCTC+TGG | - | chr1.3:75922063-75922082 | None:intergenic | 65.0% | |
| !! | ACAGTGGCGGATCTACCGCC+CGG | + | chr1.3:75918101-75918120 | MS.gene74985:intron | 65.0% |
| !! | TGAGAGGGGAGGGCTTTGGG+CGG | - | chr1.3:75920971-75920990 | None:intergenic | 65.0% |
| AGGGGAGTGGAGGGCTGTGG+GGG | + | chr1.3:75920739-75920758 | MS.gene74985:intron | 70.0% | |
| ATTGAGCCCGGGCGAGTGCC+CGG | - | chr1.3:75918132-75918151 | None:intergenic | 70.0% | |
| GAGGGGAGTGGAGGGCTGTG+GGG | + | chr1.3:75920738-75920757 | MS.gene74985:intron | 70.0% | |
| GGAGGGGAGTGGAGGGCTGT+GGG | + | chr1.3:75920737-75920756 | MS.gene74985:intron | 70.0% | |
| TGGAGGGGAGTGGAGGGCTG+TGG | + | chr1.3:75920736-75920755 | MS.gene74985:intron | 70.0% | |
| !! | GAGAGGGGAGGGCTTTGGGC+GGG | - | chr1.3:75920970-75920989 | None:intergenic | 70.0% |
| ATCTACCGCCCGGCGACCCC+GGG | + | chr1.3:75918111-75918130 | MS.gene74985:intron | 75.0% | |
| CACCCCCTGGACCAGGGTCC+TGG | + | chr1.3:75918916-75918935 | MS.gene74985:intron | 75.0% | |
| GATCTACCGCCCGGCGACCC+CGG | + | chr1.3:75918110-75918129 | MS.gene74985:intron | 75.0% | |
| TTGAGCCCGGGCGAGTGCCC+GGG | - | chr1.3:75918131-75918150 | None:intergenic | 75.0% | |
| ! | TGGGCCACAGTGGCGGAGCC+AGG | - | chr1.3:75919244-75919263 | None:intergenic | 75.0% |
| ! | TGAGCCCGGGCGAGTGCCCG+GGG | - | chr1.3:75918130-75918149 | None:intergenic | 80.0% |
| ! | GAGTGCCCGGGGTCGCCGGG+CGG | - | chr1.3:75918119-75918138 | None:intergenic | 85.0% |
| ! | GCGACCCCGGGCACTCGCCC+GGG | + | chr1.3:75918123-75918142 | MS.gene74985:intron | 85.0% |
| ! | GGCGACCCCGGGCACTCGCC+CGG | + | chr1.3:75918122-75918141 | MS.gene74985:intron | 85.0% |
| ! | GGCGAGTGCCCGGGGTCGCC+GGG | - | chr1.3:75918122-75918141 | None:intergenic | 85.0% |
| ! | GGGCGAGTGCCCGGGGTCGC+CGG | - | chr1.3:75918123-75918142 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 75917713 | 75922203 | 75917713 | ID=MS.gene74985 |
| chr1.3 | mRNA | 75917713 | 75922203 | 75917713 | ID=MS.gene74985.t1;Parent=MS.gene74985 |
| chr1.3 | exon | 75917713 | 75917902 | 75917713 | ID=MS.gene74985.t1.exon1;Parent=MS.gene74985.t1 |
| chr1.3 | CDS | 75917713 | 75917902 | 75917713 | ID=cds.MS.gene74985.t1;Parent=MS.gene74985.t1 |
| chr1.3 | exon | 75919437 | 75919635 | 75919437 | ID=MS.gene74985.t1.exon2;Parent=MS.gene74985.t1 |
| chr1.3 | CDS | 75919437 | 75919635 | 75919437 | ID=cds.MS.gene74985.t1;Parent=MS.gene74985.t1 |
| chr1.3 | exon | 75919718 | 75919838 | 75919718 | ID=MS.gene74985.t1.exon3;Parent=MS.gene74985.t1 |
| chr1.3 | CDS | 75919718 | 75919838 | 75919718 | ID=cds.MS.gene74985.t1;Parent=MS.gene74985.t1 |
| chr1.3 | exon | 75921903 | 75921965 | 75921903 | ID=MS.gene74985.t1.exon4;Parent=MS.gene74985.t1 |
| chr1.3 | CDS | 75921903 | 75921965 | 75921903 | ID=cds.MS.gene74985.t1;Parent=MS.gene74985.t1 |
| chr1.3 | exon | 75922057 | 75922203 | 75922057 | ID=MS.gene74985.t1.exon5;Parent=MS.gene74985.t1 |
| chr1.3 | CDS | 75922057 | 75922203 | 75922057 | ID=cds.MS.gene74985.t1;Parent=MS.gene74985.t1 |
| Gene Sequence |
| Protein sequence |
