Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82160.t1 | XP_024638485.1 | 97.1 | 713 | 21 | 0 | 1 | 713 | 1 | 713 | 0.00E+00 | 1359.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82160.t1 | Q9MA15 | 73.1 | 703 | 174 | 3 | 22 | 712 | 8 | 707 | 1.2e-294 | 1013.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82160.t1 | G7JFX0 | 97.1 | 713 | 21 | 0 | 1 | 713 | 1 | 713 | 0.0e+00 | 1359.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049150 | MS.gene82160 | 0.80572 | 1.17E-49 | -1.69E-46 |
MS.gene049153 | MS.gene82160 | 0.803604 | 3.22E-49 | -1.69E-46 |
MS.gene049170 | MS.gene82160 | 0.805031 | 1.62E-49 | -1.69E-46 |
MS.gene050426 | MS.gene82160 | -0.821946 | 3.08E-53 | -1.69E-46 |
MS.gene050642 | MS.gene82160 | 0.883162 | 5.66E-71 | -1.69E-46 |
MS.gene051171 | MS.gene82160 | 0.800011 | 1.76E-48 | -1.69E-46 |
MS.gene051240 | MS.gene82160 | 0.820224 | 7.68E-53 | -1.69E-46 |
MS.gene051983 | MS.gene82160 | 0.874346 | 7.25E-68 | -1.69E-46 |
MS.gene052011 | MS.gene82160 | -0.826404 | 2.76E-54 | -1.69E-46 |
MS.gene052077 | MS.gene82160 | 0.833037 | 6.71E-56 | -1.69E-46 |
MS.gene052176 | MS.gene82160 | 0.811265 | 7.63E-51 | -1.69E-46 |
MS.gene052188 | MS.gene82160 | 0.808488 | 3.02E-50 | -1.69E-46 |
MS.gene052340 | MS.gene82160 | 0.825638 | 4.20E-54 | -1.69E-46 |
MS.gene052469 | MS.gene82160 | 0.810729 | 9.97E-51 | -1.69E-46 |
MS.gene052600 | MS.gene82160 | 0.835879 | 1.30E-56 | -1.69E-46 |
MS.gene053330 | MS.gene82160 | 0.81548 | 9.05E-52 | -1.69E-46 |
MS.gene053836 | MS.gene82160 | 0.808443 | 3.09E-50 | -1.69E-46 |
MS.gene053928 | MS.gene82160 | 0.820081 | 8.28E-53 | -1.69E-46 |
MS.gene054349 | MS.gene82160 | 0.805461 | 1.32E-49 | -1.69E-46 |
MS.gene054719 | MS.gene82160 | 0.832243 | 1.06E-55 | -1.69E-46 |
MS.gene054983 | MS.gene82160 | 0.807114 | 5.92E-50 | -1.69E-46 |
MS.gene055539 | MS.gene82160 | 0.810034 | 1.41E-50 | -1.69E-46 |
MS.gene05553 | MS.gene82160 | 0.842546 | 2.42E-58 | -1.69E-46 |
MS.gene056659 | MS.gene82160 | 0.817438 | 3.30E-52 | -1.69E-46 |
MS.gene056979 | MS.gene82160 | 0.856763 | 2.58E-62 | -1.69E-46 |
MS.gene057396 | MS.gene82160 | 0.811683 | 6.19E-51 | -1.69E-46 |
MS.gene058002 | MS.gene82160 | 0.807753 | 4.33E-50 | -1.69E-46 |
MS.gene05811 | MS.gene82160 | 0.816735 | 4.74E-52 | -1.69E-46 |
MS.gene058142 | MS.gene82160 | 0.88067 | 4.53E-70 | -1.69E-46 |
MS.gene058276 | MS.gene82160 | 0.852257 | 5.20E-61 | -1.69E-46 |
MS.gene058710 | MS.gene82160 | 0.811827 | 5.76E-51 | -1.69E-46 |
MS.gene058743 | MS.gene82160 | 0.833126 | 6.38E-56 | -1.69E-46 |
MS.gene058746 | MS.gene82160 | 0.81392 | 2.00E-51 | -1.69E-46 |
MS.gene05907 | MS.gene82160 | 0.801586 | 8.40E-49 | -1.69E-46 |
MS.gene059247 | MS.gene82160 | 0.844844 | 5.88E-59 | -1.69E-46 |
MS.gene059285 | MS.gene82160 | 0.814027 | 1.90E-51 | -1.69E-46 |
MS.gene05984 | MS.gene82160 | 0.82299 | 1.76E-53 | -1.69E-46 |
MS.gene059894 | MS.gene82160 | 0.80656 | 7.75E-50 | -1.69E-46 |
MS.gene060083 | MS.gene82160 | 0.808142 | 3.58E-50 | -1.69E-46 |
MS.gene060407 | MS.gene82160 | 0.849696 | 2.74E-60 | -1.69E-46 |
MS.gene061049 | MS.gene82160 | 0.805849 | 1.09E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82160.t1 | MTR_4g026450 | 97.055 | 713 | 21 | 0 | 1 | 713 | 1 | 713 | 0.0 | 1413 |
MS.gene82160.t1 | MTR_0053s0030 | 77.684 | 708 | 149 | 3 | 7 | 713 | 2 | 701 | 0.0 | 1095 |
MS.gene82160.t1 | MTR_6g038750 | 41.273 | 550 | 294 | 8 | 101 | 638 | 78 | 610 | 8.97e-140 | 427 |
MS.gene82160.t1 | MTR_1g046620 | 42.672 | 464 | 257 | 5 | 100 | 560 | 132 | 589 | 2.41e-130 | 404 |
MS.gene82160.t1 | MTR_1g009860 | 38.286 | 525 | 314 | 6 | 64 | 581 | 37 | 558 | 4.78e-127 | 390 |
MS.gene82160.t1 | MTR_1g009860 | 35.437 | 618 | 367 | 12 | 64 | 672 | 37 | 631 | 1.02e-126 | 391 |
MS.gene82160.t1 | MTR_3g105760 | 37.328 | 509 | 272 | 7 | 167 | 641 | 136 | 631 | 1.02e-113 | 358 |
MS.gene82160.t1 | MTR_1g095480 | 35.317 | 504 | 291 | 10 | 101 | 578 | 139 | 633 | 2.73e-87 | 292 |
MS.gene82160.t1 | MTR_1g095480 | 35.381 | 472 | 277 | 8 | 100 | 546 | 138 | 606 | 5.17e-86 | 283 |
MS.gene82160.t1 | MTR_3g094740 | 33.853 | 449 | 253 | 9 | 143 | 555 | 191 | 631 | 8.01e-73 | 251 |
MS.gene82160.t1 | MTR_3g094740 | 33.853 | 449 | 253 | 9 | 143 | 555 | 191 | 631 | 8.06e-73 | 251 |
MS.gene82160.t1 | MTR_8g091710 | 32.211 | 475 | 270 | 10 | 121 | 555 | 160 | 622 | 1.24e-71 | 248 |
MS.gene82160.t1 | MTR_3g082750 | 34.872 | 390 | 241 | 5 | 148 | 530 | 197 | 580 | 1.10e-68 | 239 |
MS.gene82160.t1 | MTR_0224s0030 | 34.599 | 237 | 143 | 4 | 348 | 578 | 19 | 249 | 1.25e-41 | 154 |
MS.gene82160.t1 | MTR_5g068050 | 25.381 | 394 | 261 | 5 | 155 | 518 | 128 | 518 | 7.37e-37 | 145 |
MS.gene82160.t1 | MTR_1g008980 | 31.930 | 285 | 166 | 6 | 166 | 432 | 65 | 339 | 3.90e-35 | 143 |
MS.gene82160.t1 | MTR_5g077080 | 34.241 | 257 | 153 | 6 | 166 | 414 | 98 | 346 | 4.50e-35 | 140 |
MS.gene82160.t1 | MTR_4g104070 | 26.010 | 396 | 264 | 10 | 136 | 515 | 59 | 441 | 2.75e-33 | 134 |
MS.gene82160.t1 | MTR_8g464860 | 25.917 | 409 | 263 | 7 | 142 | 520 | 199 | 597 | 1.09e-28 | 122 |
MS.gene82160.t1 | MTR_3g070410 | 28.125 | 288 | 186 | 6 | 139 | 408 | 74 | 358 | 2.87e-27 | 117 |
MS.gene82160.t1 | MTR_0092s0090 | 61.739 | 115 | 9 | 1 | 201 | 315 | 214 | 293 | 4.44e-23 | 101 |
MS.gene82160.t1 | MTR_0092s0090 | 92.683 | 41 | 3 | 0 | 390 | 430 | 302 | 342 | 4.53e-17 | 83.6 |
MS.gene82160.t1 | MTR_4g091510 | 24.190 | 401 | 263 | 9 | 150 | 518 | 208 | 599 | 6.53e-22 | 101 |
MS.gene82160.t1 | MTR_2g011640 | 27.090 | 299 | 185 | 6 | 161 | 434 | 275 | 565 | 7.08e-22 | 101 |
MS.gene82160.t1 | MTR_4g091510 | 24.190 | 401 | 263 | 9 | 150 | 518 | 213 | 604 | 7.49e-22 | 100 |
MS.gene82160.t1 | MTR_1g085610 | 29.110 | 292 | 174 | 9 | 167 | 443 | 242 | 515 | 6.08e-21 | 98.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82160.t1 | AT1G79600 | 72.175 | 708 | 188 | 1 | 15 | 713 | 1 | 708 | 0.0 | 1040 |
MS.gene82160.t1 | AT1G71810 | 43.053 | 511 | 271 | 5 | 110 | 610 | 78 | 578 | 1.30e-139 | 426 |
MS.gene82160.t1 | AT3G24190 | 43.534 | 464 | 253 | 6 | 100 | 560 | 140 | 597 | 1.04e-131 | 408 |
MS.gene82160.t1 | AT4G31390 | 40.412 | 485 | 282 | 3 | 101 | 581 | 113 | 594 | 8.66e-127 | 392 |
MS.gene82160.t1 | AT5G24970 | 38.545 | 550 | 281 | 9 | 101 | 605 | 93 | 630 | 8.34e-121 | 378 |
MS.gene82160.t1 | AT5G24970 | 38.545 | 550 | 281 | 9 | 101 | 605 | 132 | 669 | 3.57e-120 | 377 |
MS.gene82160.t1 | AT4G31390 | 39.175 | 485 | 263 | 4 | 101 | 581 | 113 | 569 | 1.26e-117 | 368 |
MS.gene82160.t1 | AT5G24970 | 38.000 | 550 | 281 | 10 | 101 | 605 | 93 | 627 | 1.70e-116 | 367 |
MS.gene82160.t1 | AT4G31390 | 41.709 | 398 | 228 | 2 | 185 | 581 | 1 | 395 | 3.96e-110 | 342 |
MS.gene82160.t1 | AT2G39190 | 33.211 | 545 | 304 | 12 | 100 | 595 | 145 | 678 | 9.48e-85 | 285 |
MS.gene82160.t1 | AT3G07700 | 34.586 | 399 | 254 | 4 | 137 | 530 | 171 | 567 | 7.24e-71 | 244 |
MS.gene82160.t1 | AT3G07700 | 34.586 | 399 | 254 | 4 | 137 | 530 | 171 | 567 | 7.24e-71 | 244 |
MS.gene82160.t1 | AT3G07700 | 34.586 | 399 | 254 | 4 | 137 | 530 | 171 | 567 | 7.24e-71 | 244 |
MS.gene82160.t1 | AT5G64940 | 33.480 | 454 | 256 | 9 | 140 | 555 | 203 | 648 | 9.21e-70 | 243 |
MS.gene82160.t1 | AT5G64940 | 33.480 | 454 | 256 | 9 | 140 | 555 | 203 | 648 | 9.21e-70 | 243 |
MS.gene82160.t1 | AT3G07700 | 33.100 | 429 | 249 | 6 | 137 | 530 | 171 | 596 | 3.21e-68 | 238 |
MS.gene82160.t1 | AT5G05200 | 26.010 | 396 | 256 | 5 | 155 | 518 | 129 | 519 | 2.77e-39 | 153 |
MS.gene82160.t1 | AT4G24810 | 29.568 | 301 | 183 | 8 | 136 | 419 | 13 | 301 | 6.09e-37 | 141 |
MS.gene82160.t1 | AT4G24810 | 27.848 | 316 | 201 | 7 | 136 | 436 | 13 | 316 | 8.88e-37 | 140 |
MS.gene82160.t1 | AT4G24810 | 24.709 | 429 | 266 | 10 | 136 | 531 | 13 | 417 | 4.24e-36 | 142 |
MS.gene82160.t1 | AT4G24810 | 24.709 | 429 | 266 | 10 | 136 | 531 | 13 | 417 | 4.24e-36 | 142 |
MS.gene82160.t1 | AT4G24810 | 24.709 | 429 | 266 | 10 | 136 | 531 | 56 | 460 | 9.55e-36 | 141 |
MS.gene82160.t1 | AT5G24810 | 32.667 | 300 | 167 | 9 | 136 | 417 | 89 | 371 | 2.39e-34 | 141 |
MS.gene82160.t1 | AT4G24810 | 24.541 | 436 | 265 | 11 | 136 | 531 | 13 | 424 | 4.09e-34 | 136 |
MS.gene82160.t1 | AT2G39190 | 37.788 | 217 | 129 | 4 | 100 | 313 | 145 | 358 | 1.33e-33 | 133 |
MS.gene82160.t1 | AT1G65950 | 32.411 | 253 | 163 | 4 | 166 | 414 | 113 | 361 | 3.39e-33 | 134 |
MS.gene82160.t1 | AT1G65950 | 32.411 | 253 | 163 | 4 | 166 | 414 | 113 | 361 | 1.24e-32 | 133 |
MS.gene82160.t1 | AT5G50330 | 28.527 | 319 | 201 | 9 | 136 | 439 | 56 | 362 | 2.15e-32 | 132 |
MS.gene82160.t1 | AT5G24810 | 29.909 | 331 | 166 | 10 | 136 | 417 | 89 | 402 | 1.52e-29 | 126 |
MS.gene82160.t1 | AT2G40090 | 28.481 | 316 | 201 | 9 | 139 | 434 | 76 | 386 | 1.03e-27 | 118 |
MS.gene82160.t1 | AT5G50330 | 26.646 | 319 | 191 | 10 | 136 | 439 | 56 | 346 | 2.63e-26 | 113 |
MS.gene82160.t1 | AT1G11390 | 25.000 | 404 | 257 | 10 | 149 | 518 | 207 | 598 | 1.06e-24 | 109 |
MS.gene82160.t1 | AT1G61640 | 24.121 | 398 | 253 | 9 | 155 | 518 | 213 | 595 | 7.24e-24 | 107 |
MS.gene82160.t1 | AT1G61640 | 26.774 | 310 | 186 | 7 | 155 | 434 | 213 | 511 | 1.15e-23 | 106 |
MS.gene82160.t1 | AT4G01660 | 27.491 | 291 | 184 | 9 | 167 | 445 | 240 | 515 | 4.44e-19 | 92.0 |
MS.gene82160.t1 | AT1G61640 | 27.317 | 205 | 126 | 4 | 155 | 344 | 213 | 409 | 6.37e-15 | 78.6 |
Find 137 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTCAGATTGTGTTTAATT+TGG | 0.146085 | 4.2:+76668736 | MS.gene82160:CDS |
TTGTATCAATATCCATTTAA+TGG | 0.197786 | 4.2:+76671490 | MS.gene82160:CDS |
CAACTTGTTGCTTCAAGATA+TGG | 0.207079 | 4.2:+76668044 | MS.gene82160:CDS |
TGCAGCAAGCACCTTAAAAT+TGG | 0.225494 | 4.2:-76671891 | None:intergenic |
TTCTACCTCATTAGAGGTTT+AGG | 0.250334 | 4.2:+76670229 | MS.gene82160:CDS |
GAATGCATTGAGAGGGAATT+AGG | 0.251683 | 4.2:+76670052 | MS.gene82160:CDS |
CCCATTTCTTCATGGATTCA+TGG | 0.256079 | 4.2:+76667774 | MS.gene82160:CDS |
ATTGCATATCTCGCTTCTTC+TGG | 0.260739 | 4.2:-76671271 | None:intergenic |
GTGTTTAATTTGGGTTCATT+TGG | 0.267830 | 4.2:+76668746 | MS.gene82160:CDS |
TTTCAGATTGTGTTTAATTT+GGG | 0.276250 | 4.2:+76668737 | MS.gene82160:CDS |
TCTACCTCATTAGAGGTTTA+GGG | 0.280854 | 4.2:+76670230 | MS.gene82160:CDS |
CTCAACAACCCATTTCTTCA+TGG | 0.283594 | 4.2:+76667766 | MS.gene82160:CDS |
CATACTATGCGTTGATATTA+AGG | 0.284829 | 4.2:+76671828 | MS.gene82160:CDS |
AACATTATCTCACCATTAAA+TGG | 0.304241 | 4.2:-76671502 | None:intergenic |
CGCTTTCTTATGCAATTACT+TGG | 0.319801 | 4.2:+76673586 | MS.gene82160:CDS |
GAAGCGAGATATGCAATAAT+TGG | 0.323684 | 4.2:+76671277 | MS.gene82160:CDS |
TCCTCATCCTGGTAATCTTT+TGG | 0.327146 | 4.2:+76671195 | MS.gene82160:CDS |
CAACCTGAGGCCCGTAAACT+TGG | 0.330945 | 4.2:+76673523 | MS.gene82160:CDS |
ATTAAGGTCTCTCACTGTTC+TGG | 0.337948 | 4.2:+76671844 | MS.gene82160:CDS |
TTGGACTTCTACCTCATTAG+AGG | 0.338286 | 4.2:+76670223 | MS.gene82160:CDS |
GCTTGAAAACCTTCTAGTTC+AGG | 0.339166 | 4.2:+76672366 | MS.gene82160:CDS |
CCGATAGCTGCTGCTAGTTT+AGG | 0.342246 | 4.2:+76670115 | MS.gene82160:CDS |
TGTTTAATTTGGGTTCATTT+GGG | 0.356535 | 4.2:+76668747 | MS.gene82160:CDS |
GAGTTGCTGATCAGAATAAA+AGG | 0.357382 | 4.2:+76668798 | MS.gene82160:CDS |
TTTCGAAGTGCAGGAACAAT+TGG | 0.368170 | 4.2:-76671391 | None:intergenic |
GCATCTCTTAGATATGGATT+TGG | 0.372745 | 4.2:-76671950 | None:intergenic |
TTGAGGAACCTTGTCTTCAA+TGG | 0.379397 | 4.2:+76672562 | MS.gene82160:CDS |
TACTCAGATGGACAAATATC+AGG | 0.388127 | 4.2:-76668902 | None:intergenic |
ATCAGAGCATCTCTTAGATA+TGG | 0.388348 | 4.2:-76671956 | None:intergenic |
ACGAAACTGTGAATTCAATA+AGG | 0.388723 | 4.2:-76667853 | None:intergenic |
GAGATCAAGTGATTAGGATA+TGG | 0.389231 | 4.2:+76672644 | MS.gene82160:CDS |
AAGACGATTGTGGACGGTCT+CGG | 0.394059 | 4.2:+76671460 | MS.gene82160:CDS |
ATATGGTTCTAAACCCTTCA+AGG | 0.397792 | 4.2:+76668061 | MS.gene82160:CDS |
GCCATGAATCCATGAAGAAA+TGG | 0.401379 | 4.2:-76667775 | None:intergenic |
CATTCAAAGGCGTCCTCGTC+AGG | 0.401484 | 4.2:-76670034 | None:intergenic |
GAAACTGAACTTTGTGATGA+TGG | 0.402520 | 4.2:-76667897 | None:intergenic |
GCCTTAAGGGAACCATCTTT+AGG | 0.402827 | 4.2:-76667933 | None:intergenic |
TTCACAGTTTCGTGCTGCTT+TGG | 0.406279 | 4.2:+76667863 | MS.gene82160:CDS |
TGGAAGTGCAAGAGCCTTAA+GGG | 0.410212 | 4.2:-76667946 | None:intergenic |
TGATGAGGTGAGATTTGAAA+TGG | 0.422742 | 4.2:-76667805 | None:intergenic |
TGACCCAATTTGACAAAAGT+TGG | 0.428903 | 4.2:-76668863 | None:intergenic |
AGCTGCTGCTAGTTTAGGTC+AGG | 0.429613 | 4.2:+76670120 | MS.gene82160:CDS |
TCAGTTTCTGACATCATAAG+TGG | 0.430403 | 4.2:-76672598 | None:intergenic |
AGAAATATATTCACTAAGCT+TGG | 0.434347 | 4.2:+76668839 | MS.gene82160:CDS |
GCGGTCAAGGTCCAGCGCCC+TGG | 0.436222 | 4.2:+76670181 | MS.gene82160:CDS |
TTGGAAGTGCAAGAGCCTTA+AGG | 0.438124 | 4.2:-76667947 | None:intergenic |
TCATGCTGAGGCAAAAGCTT+TGG | 0.439035 | 4.2:+76667989 | MS.gene82160:CDS |
CTTGAAAACCTTCTAGTTCA+GGG | 0.442279 | 4.2:+76672367 | MS.gene82160:CDS |
AGGAACATACCGGTATGTTT+CGG | 0.445651 | 4.2:-76672533 | None:intergenic |
TACCTTCAGGACAGGTTGTA+AGG | 0.451984 | 4.2:-76672422 | None:intergenic |
ATGCTCTTGATTTCTTATCC+AGG | 0.455968 | 4.2:+76671353 | MS.gene82160:CDS |
GAGGCAAGGGCTTAATGTCT+TGG | 0.460509 | 4.2:+76671105 | MS.gene82160:CDS |
AATTGGTCACGTTGTTCACT+TGG | 0.461315 | 4.2:+76671294 | MS.gene82160:CDS |
ACCTAAAGATGGTTCCCTTA+AGG | 0.465316 | 4.2:+76667932 | MS.gene82160:CDS |
AACCTGAGGCCCGTAAACTT+GGG | 0.465701 | 4.2:+76673524 | MS.gene82160:CDS |
AGAAATGGGTTGTTGAGATA+TGG | 0.468867 | 4.2:-76667760 | None:intergenic |
TTATCAACATCACCTAAAGA+TGG | 0.471856 | 4.2:+76667921 | MS.gene82160:CDS |
AGCTCAGAGATCAAGTGATT+AGG | 0.475418 | 4.2:+76672638 | MS.gene82160:CDS |
TGCTCTTGATTTCTTATCCA+GGG | 0.476064 | 4.2:+76671354 | MS.gene82160:CDS |
TCAAGAGCTTAACTATGTGC+AGG | 0.477500 | 4.2:+76670330 | MS.gene82160:CDS |
GAAATATCACAAAACCTTGA+AGG | 0.478269 | 4.2:-76668075 | None:intergenic |
CTTCTTCAATGCCAGGGCGC+TGG | 0.484603 | 4.2:-76670192 | None:intergenic |
GCAGCAAGCACCTTAAAATT+GGG | 0.485400 | 4.2:-76671890 | None:intergenic |
TAAGGCTCTTGCACTTCCAA+TGG | 0.486887 | 4.2:+76667950 | MS.gene82160:CDS |
CCTATAGCTTCTTCAATGCC+AGG | 0.489261 | 4.2:-76670199 | None:intergenic |
CCTGGCATTGAAGAAGCTAT+AGG | 0.499950 | 4.2:+76670199 | MS.gene82160:CDS |
GGGCAAAGTTGTTGCGGTCA+AGG | 0.500027 | 4.2:+76670168 | MS.gene82160:CDS |
TTCCTCAGAACTTCACCATC+AGG | 0.502663 | 4.2:-76672454 | None:intergenic |
GATGAGGTGAGATTTGAAAT+GGG | 0.504597 | 4.2:-76667804 | None:intergenic |
AAAGCTCGGTTGAAGCGGTC+GGG | 0.505739 | 4.2:+76670148 | MS.gene82160:CDS |
CGAAGGTACTAACGATCGAT+TGG | 0.507393 | 4.2:+76671044 | MS.gene82160:CDS |
TGTTGTGTAGGTTGCGGGAA+GGG | 0.512424 | 4.2:+76668712 | MS.gene82160:intron |
AATATCAACGCATAGTATGC+TGG | 0.512574 | 4.2:-76671824 | None:intergenic |
CTAACGATCGATTGGGTCGA+AGG | 0.517986 | 4.2:+76671052 | MS.gene82160:CDS |
GCTTAACTTCAAGACGATTG+TGG | 0.518649 | 4.2:+76671450 | MS.gene82160:CDS |
TAGGTCAGGTTTATAAAGCT+CGG | 0.519929 | 4.2:+76670134 | MS.gene82160:CDS |
TTCCATGCTGATCCTCATCC+TGG | 0.520185 | 4.2:+76671184 | MS.gene82160:CDS |
TGTTGAGATATGGTGGAAGA+AGG | 0.522138 | 4.2:-76667750 | None:intergenic |
CTCAGACAACTGCTCGAGTA+CGG | 0.524488 | 4.2:+76671157 | MS.gene82160:CDS |
ATATCATCAGCACGGTCCAT+TGG | 0.525714 | 4.2:-76667966 | None:intergenic |
TAAAGCTCGGTTGAAGCGGT+CGG | 0.526705 | 4.2:+76670147 | MS.gene82160:CDS |
TGGGTCAAGGGCTGTCTACT+AGG | 0.529031 | 4.2:+76668879 | MS.gene82160:CDS |
TAGAGATTTCTCTGCTAAAG+AGG | 0.529315 | 4.2:+76672399 | MS.gene82160:CDS |
TTGTTGTGTAGGTTGCGGGA+AGG | 0.536381 | 4.2:+76668711 | MS.gene82160:intron |
TGGAGATACATCAATATCCC+TGG | 0.537417 | 4.2:-76671371 | None:intergenic |
CAGGACTCAACAATACCTTC+AGG | 0.537914 | 4.2:-76672435 | None:intergenic |
CTAGCAGCAGCTATCGGCGA+TGG | 0.540209 | 4.2:-76670109 | None:intergenic |
CGCCTTTGAATGCATTGAGA+GGG | 0.540213 | 4.2:+76670045 | MS.gene82160:CDS |
GCACAATTTCCGAAACATAC+CGG | 0.540600 | 4.2:+76672524 | MS.gene82160:CDS |
CCTAAACTAGCAGCAGCTAT+CGG | 0.540644 | 4.2:-76670115 | None:intergenic |
TTTATAAAGCTCGGTTGAAG+CGG | 0.541624 | 4.2:+76670143 | MS.gene82160:CDS |
CATTGAAGAAGCTATAGGAT+TGG | 0.543334 | 4.2:+76670204 | MS.gene82160:CDS |
GGCCTTACAACCTGTCCTGA+AGG | 0.543439 | 4.2:+76672420 | MS.gene82160:CDS |
CCATGAATCCATGAAGAAAT+GGG | 0.544524 | 4.2:-76667774 | None:intergenic |
GAGCCATAGCTTCGTAGTCT+CGG | 0.545454 | 4.2:-76671321 | None:intergenic |
ACCTGAGGCCCGTAAACTTG+GGG | 0.549273 | 4.2:+76673525 | MS.gene82160:CDS |
GTTTCTAATAAATAAATATG+TGG | 0.549328 | 4.2:+76670252 | MS.gene82160:CDS |
CTCAACAATACCTTCAGGAC+AGG | 0.549422 | 4.2:-76672430 | None:intergenic |
TTGCATTGCCATTGAAGACA+AGG | 0.554912 | 4.2:-76672570 | None:intergenic |
AGGTCTCTCACTGTTCTGGA+AGG | 0.557957 | 4.2:+76671848 | MS.gene82160:CDS |
AAATATCACAAAACCTTGAA+GGG | 0.558354 | 4.2:-76668074 | None:intergenic |
GCCAAAAGATTACCAGGATG+AGG | 0.558707 | 4.2:-76671196 | None:intergenic |
GAAGGTACTAACGATCGATT+GGG | 0.560592 | 4.2:+76671045 | MS.gene82160:CDS |
TTCCCTCTCAATGCATTCAA+AGG | 0.562534 | 4.2:-76670047 | None:intergenic |
CAAGAAGCAATTGAGAGGCA+AGG | 0.576159 | 4.2:+76671091 | MS.gene82160:CDS |
TAACCGAGACTACGAAGCTA+TGG | 0.578460 | 4.2:+76671318 | MS.gene82160:CDS |
AAGAAGCAATTGAGAGGCAA+GGG | 0.580778 | 4.2:+76671092 | MS.gene82160:CDS |
GCGTCCTCGTCAGGAAATGT+TGG | 0.582997 | 4.2:-76670025 | None:intergenic |
AATGGGTTGTTGAGATATGG+TGG | 0.584838 | 4.2:-76667757 | None:intergenic |
GAAACCCTAAACCTCTAATG+AGG | 0.585397 | 4.2:-76670234 | None:intergenic |
GGTGTTGCCAAAAGATTACC+AGG | 0.588144 | 4.2:-76671202 | None:intergenic |
TTGTCCATCTGAGTATCTTG+AGG | 0.589362 | 4.2:+76668910 | MS.gene82160:CDS |
TATCTTGAAGCAACAAGTTG+AGG | 0.593723 | 4.2:-76668041 | None:intergenic |
CTATAGCTTCTTCAATGCCA+GGG | 0.598051 | 4.2:-76670198 | None:intergenic |
ACGCCTTTGAATGCATTGAG+AGG | 0.599528 | 4.2:+76670044 | MS.gene82160:CDS |
AACTTCAAGACGATTGTGGA+CGG | 0.600151 | 4.2:+76671454 | MS.gene82160:CDS |
TTATGATGTCAGAAACTGAA+AGG | 0.603481 | 4.2:+76672602 | MS.gene82160:CDS |
CCTGAGGCCCGTAAACTTGG+GGG | 0.608957 | 4.2:+76673526 | MS.gene82160:CDS |
AGCTCCTCAAGATACTCAGA+TGG | 0.610256 | 4.2:-76668914 | None:intergenic |
TGCAGGAGGGACAAAATGCA+AGG | 0.613387 | 4.2:+76670951 | MS.gene82160:intron |
TATCGGCGATGGAGATATTG+TGG | 0.615296 | 4.2:-76670098 | None:intergenic |
AAGGTATTGTTGAGTCCTGA+TGG | 0.620888 | 4.2:+76672439 | MS.gene82160:CDS |
TGTCTTCAATGGCAATGCAA+AGG | 0.625326 | 4.2:+76672573 | MS.gene82160:CDS |
AGTATCGGTAGCAAAAGAGA+TGG | 0.625690 | 4.2:-76672697 | None:intergenic |
TTGAAAACCTTCTAGTTCAG+GGG | 0.625717 | 4.2:+76672368 | MS.gene82160:CDS |
ATGATCAAGAAGCAATTGAG+AGG | 0.643370 | 4.2:+76671086 | MS.gene82160:CDS |
TTTGCCAACATTTCCTGACG+AGG | 0.644621 | 4.2:+76670021 | MS.gene82160:CDS |
TACCAGGATGAGGATCAGCA+TGG | 0.652063 | 4.2:-76671186 | None:intergenic |
CTGAGGCCCGTAAACTTGGG+GGG | 0.652407 | 4.2:+76673527 | MS.gene82160:CDS |
TTGGGACTATACAAGTGCGA+AGG | 0.655685 | 4.2:+76671027 | MS.gene82160:CDS |
TGCTGATGATATTCATGCTG+AGG | 0.656845 | 4.2:+76667977 | MS.gene82160:CDS |
TGATTTGAAAGAGAGTGATG+AGG | 0.668048 | 4.2:-76667820 | None:intergenic |
CAGCATGAATATCATCAGCA+CGG | 0.670970 | 4.2:-76667974 | None:intergenic |
GTCCTGATGGTGAAGTTCTG+AGG | 0.671724 | 4.2:+76672452 | MS.gene82160:CDS |
GCGGTCGGGCAAAGTTGTTG+CGG | 0.688582 | 4.2:+76670162 | MS.gene82160:CDS |
ACAGGTGCTTCAGCAACCTG+AGG | 0.706045 | 4.2:+76673510 | MS.gene82160:intron |
GTCTTGGATCTAGTAAACAG+CGG | 0.710635 | 4.2:+76671121 | MS.gene82160:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGAAATAATAAATTGTTA+AGG | + | chr4.2:76672218-76672237 | MS.gene82160:intron | 10.0% |
!!! | ATTATATTAGATTTTTCTTT+TGG | + | chr4.2:76670900-76670919 | MS.gene82160:intron | 10.0% |
!!! | TTATATTAGATTTTTCTTTT+GGG | + | chr4.2:76670901-76670920 | MS.gene82160:intron | 10.0% |
!! | ACAAAATATATTCACAAAAA+AGG | - | chr4.2:76668169-76668188 | None:intergenic | 15.0% |
!! | CAAAATATATTCACAAAAAA+GGG | - | chr4.2:76668168-76668187 | None:intergenic | 15.0% |
!! | GTTTCTAATAAATAAATATG+TGG | + | chr4.2:76670252-76670271 | MS.gene82160:CDS | 15.0% |
!! | TAAATTGTTAAGGATATTAT+AGG | + | chr4.2:76672228-76672247 | MS.gene82160:intron | 15.0% |
!! | TTTAAAAATGACAAATAAGT+AGG | - | chr4.2:76672124-76672143 | None:intergenic | 15.0% |
!!! | AGTAATAAATTGCTATATTT+TGG | - | chr4.2:76672970-76672989 | None:intergenic | 15.0% |
!!! | GTTTTATTCATTAAAATACA+AGG | - | chr4.2:76670867-76670886 | None:intergenic | 15.0% |
!!! | TATATTAGATTTTTCTTTTG+GGG | + | chr4.2:76670902-76670921 | MS.gene82160:intron | 15.0% |
!!! | TTTTTGTGAATATATTTTGT+GGG | + | chr4.2:76668169-76668188 | MS.gene82160:intron | 15.0% |
!!! | TTTTTTGTGAATATATTTTG+TGG | + | chr4.2:76668168-76668187 | MS.gene82160:intron | 15.0% |
!! | AAACAACAAATAAAAAGGAA+TGG | + | chr4.2:76672285-76672304 | MS.gene82160:intron | 20.0% |
!! | AAGGTTTAAATGTTAATTGA+GGG | - | chr4.2:76672997-76673016 | None:intergenic | 20.0% |
!! | AATGTAAAGTGATTTATGTT+TGG | - | chr4.2:76669229-76669248 | None:intergenic | 20.0% |
!! | ACAAAAGATAATCACAAAAA+AGG | - | chr4.2:76668647-76668666 | None:intergenic | 20.0% |
!! | ATTATATTCAATTACAGTGT+TGG | - | chr4.2:76668267-76668286 | None:intergenic | 20.0% |
!! | ATTTCAGATTGTGTTTAATT+TGG | + | chr4.2:76668736-76668755 | MS.gene82160:CDS | 20.0% |
!! | CAAAAGATAATCACAAAAAA+GGG | - | chr4.2:76668646-76668665 | None:intergenic | 20.0% |
!! | CATATATTAGATTATCTCTT+CGG | - | chr4.2:76670499-76670518 | None:intergenic | 20.0% |
!! | CCTTAAAACAACAAATAAAA+AGG | + | chr4.2:76672280-76672299 | MS.gene82160:intron | 20.0% |
!! | GATGAAAACAAACATAATAA+AGG | - | chr4.2:76669897-76669916 | None:intergenic | 20.0% |
!! | TCATTATCAAATACAGATTT+CGG | - | chr4.2:76670375-76670394 | None:intergenic | 20.0% |
!! | TTGTATCAATATCCATTTAA+TGG | + | chr4.2:76671490-76671509 | MS.gene82160:CDS | 20.0% |
!!! | AAATTTATATCGATTTAGTG+CGG | + | chr4.2:76669467-76669486 | MS.gene82160:intron | 20.0% |
!!! | AATAAATTGCTATATTTTGG+TGG | - | chr4.2:76672967-76672986 | None:intergenic | 20.0% |
!!! | ACTATTTGACTATTTCATTT+TGG | + | chr4.2:76669389-76669408 | MS.gene82160:intron | 20.0% |
!!! | ACTCAAATTATTTTACATGT+TGG | + | chr4.2:76672849-76672868 | MS.gene82160:intron | 20.0% |
!!! | ATTTGAGTTAAACATTTAAG+TGG | - | chr4.2:76672837-76672856 | None:intergenic | 20.0% |
!!! | CCTTTTTATTTGTTGTTTTA+AGG | - | chr4.2:76672283-76672302 | None:intergenic | 20.0% |
!!! | CTATTTGACTATTTCATTTT+GGG | + | chr4.2:76669390-76669409 | MS.gene82160:intron | 20.0% |
!!! | TCAATTCTGATTACTTTTAT+AGG | + | chr4.2:76669490-76669509 | MS.gene82160:intron | 20.0% |
!!! | TGTGTAATTTTTTGATGTAT+TGG | + | chr4.2:76673183-76673202 | MS.gene82160:intron | 20.0% |
!!! | TTAATTCTATGTTCTTTTGA+TGG | + | chr4.2:76672923-76672942 | MS.gene82160:intron | 20.0% |
!!! | TTTCAGATTGTGTTTAATTT+GGG | + | chr4.2:76668737-76668756 | MS.gene82160:CDS | 20.0% |
!!! | TTTCTGTGATTATTTTTTGT+GGG | + | chr4.2:76668114-76668133 | MS.gene82160:intron | 20.0% |
!!! | TTTTTGTGAATATCTTTTGT+GGG | + | chr4.2:76668589-76668608 | MS.gene82160:intron | 20.0% |
!!! | TTTTTGTGATTATCTTTTGT+GGG | + | chr4.2:76668647-76668666 | MS.gene82160:intron | 20.0% |
!!! | TTTTTTGTGATTATCTTTTG+TGG | + | chr4.2:76668646-76668665 | MS.gene82160:intron | 20.0% |
! | AAATACACTCATTATATGCT+TGG | - | chr4.2:76670803-76670822 | None:intergenic | 25.0% |
! | AAATATCACAAAACCTTGAA+GGG | - | chr4.2:76668077-76668096 | None:intergenic | 25.0% |
! | AACAAATAAAAAGGAATGGA+GGG | + | chr4.2:76672289-76672308 | MS.gene82160:intron | 25.0% |
! | AACATTATCTCACCATTAAA+TGG | - | chr4.2:76671505-76671524 | None:intergenic | 25.0% |
! | AGAAATATATTCACTAAGCT+TGG | + | chr4.2:76668839-76668858 | MS.gene82160:CDS | 25.0% |
! | ATCAGTGACAAAAATTTCAA+TGG | - | chr4.2:76669940-76669959 | None:intergenic | 25.0% |
! | CAAAAAATTACACATTGTCT+GGG | - | chr4.2:76673177-76673196 | None:intergenic | 25.0% |
! | CAAATGAAAAGAAAACCAAA+AGG | - | chr4.2:76668967-76668986 | None:intergenic | 25.0% |
! | CACAGAGTAATTTAAAAACA+TGG | + | chr4.2:76669828-76669847 | MS.gene82160:intron | 25.0% |
! | CCTTAATAAATAGGAAAATC+AGG | + | chr4.2:76670439-76670458 | MS.gene82160:intron | 25.0% |
! | CTCTAATACAGAAAGAAAAT+TGG | - | chr4.2:76671553-76671572 | None:intergenic | 25.0% |
! | GAAGGTTTAAATGTTAATTG+AGG | - | chr4.2:76672998-76673017 | None:intergenic | 25.0% |
! | TACAAAAACAACGGATAAAA+TGG | - | chr4.2:76672088-76672107 | None:intergenic | 25.0% |
! | TATGATTGAAAACTGATCTT+AGG | + | chr4.2:76670520-76670539 | MS.gene82160:intron | 25.0% |
! | TCAAAAAATTACACATTGTC+TGG | - | chr4.2:76673178-76673197 | None:intergenic | 25.0% |
! | TCACAGAAAGATTAAAACTT+TGG | - | chr4.2:76668103-76668122 | None:intergenic | 25.0% |
! | TCTAACTTGAACTTAGAATT+TGG | + | chr4.2:76669155-76669174 | MS.gene82160:intron | 25.0% |
! | TCTAGAGATTGATTAATGTT+TGG | + | chr4.2:76669032-76669051 | MS.gene82160:intron | 25.0% |
! | TGATAGTAGTTTGATACAAA+AGG | + | chr4.2:76670397-76670416 | MS.gene82160:intron | 25.0% |
! | TTGAATATAATCACATGTGT+TGG | + | chr4.2:76668276-76668295 | MS.gene82160:intron | 25.0% |
!! | ATAATTGATTCTGACATGTT+TGG | + | chr4.2:76669094-76669113 | MS.gene82160:intron | 25.0% |
!! | CAGATTTTCTACAAAAACAA+CGG | - | chr4.2:76672097-76672116 | None:intergenic | 25.0% |
!! | CCTGATTTTCCTATTTATTA+AGG | - | chr4.2:76670442-76670461 | None:intergenic | 25.0% |
!! | CTATACATTTTACTGTTTCA+AGG | - | chr4.2:76673305-76673324 | None:intergenic | 25.0% |
!! | GTTTTTGCTAATATCTTTTG+TGG | + | chr4.2:76668367-76668386 | MS.gene82160:intron | 25.0% |
!! | GTTTTTGTGAATATCTTTTG+TGG | + | chr4.2:76668588-76668607 | MS.gene82160:intron | 25.0% |
!! | TGTAACTTTTGCAAAAATCA+TGG | + | chr4.2:76669603-76669622 | MS.gene82160:intron | 25.0% |
!! | TTTAGAACATATAGTTGACT+TGG | + | chr4.2:76673377-76673396 | MS.gene82160:intron | 25.0% |
!! | TTTTTGCAAAAGTTACACTT+TGG | - | chr4.2:76669600-76669619 | None:intergenic | 25.0% |
!!! | AAACTTGCTTTTCTTGATTT+CGG | + | chr4.2:76671232-76671251 | MS.gene82160:CDS | 25.0% |
!!! | AGTATTGAATTCTTACCTTT+TGG | + | chr4.2:76668949-76668968 | MS.gene82160:intron | 25.0% |
!!! | CTTTCTGTGATTATTTTTTG+TGG | + | chr4.2:76668113-76668132 | MS.gene82160:intron | 25.0% |
!!! | GATTGAATGTTAATTTTGAC+AGG | + | chr4.2:76670924-76670943 | MS.gene82160:intron | 25.0% |
!!! | TGTTTAATTTGGGTTCATTT+GGG | + | chr4.2:76668747-76668766 | MS.gene82160:CDS | 25.0% |
!!! | TGTTTTAAGGTTATTTACAC+CGG | - | chr4.2:76672270-76672289 | None:intergenic | 25.0% |
AAACAACGGATAAAATGGAA+AGG | - | chr4.2:76672083-76672102 | None:intergenic | 30.0% | |
ACGAAACTGTGAATTCAATA+AGG | - | chr4.2:76667856-76667875 | None:intergenic | 30.0% | |
AGACTCGATCCTTAATAAAT+AGG | + | chr4.2:76670430-76670449 | MS.gene82160:intron | 30.0% | |
CAAAAAATTGTATGCTGACA+AGG | + | chr4.2:76670979-76670998 | MS.gene82160:CDS | 30.0% | |
CAAAGAATCGTATTATACAC+AGG | + | chr4.2:76673492-76673511 | MS.gene82160:intron | 30.0% | |
CAACAAATAAAAAGGAATGG+AGG | + | chr4.2:76672288-76672307 | MS.gene82160:intron | 30.0% | |
CAATTGTGTCCTTAGTTAAA+AGG | + | chr4.2:76673098-76673117 | MS.gene82160:intron | 30.0% | |
CACTAATACAGATTTAGACA+CGG | + | chr4.2:76671593-76671612 | MS.gene82160:intron | 30.0% | |
CTACACAACAAAACCAAAAA+CGG | - | chr4.2:76668702-76668721 | None:intergenic | 30.0% | |
GAAATATCACAAAACCTTGA+AGG | - | chr4.2:76668078-76668097 | None:intergenic | 30.0% | |
GCTTCAAATTTGTGAATGTT+TGG | - | chr4.2:76669664-76669683 | None:intergenic | 30.0% | |
GGATATGTTCAAGTAAAAGT+AGG | - | chr4.2:76669208-76669227 | None:intergenic | 30.0% | |
TCAACAAGTTCAAACAATGA+TGG | - | chr4.2:76672038-76672057 | None:intergenic | 30.0% | |
TGATGTAGTGTTGTCAATTA+TGG | + | chr4.2:76669871-76669890 | MS.gene82160:intron | 30.0% | |
TTATCAACATCACCTAAAGA+TGG | + | chr4.2:76667921-76667940 | MS.gene82160:CDS | 30.0% | |
TTATGATGTCAGAAACTGAA+AGG | + | chr4.2:76672602-76672621 | MS.gene82160:CDS | 30.0% | |
TTTGTGAATGTTTGGATTCA+AGG | - | chr4.2:76669656-76669675 | None:intergenic | 30.0% | |
! | ACATTCACAAATTTGAAGCA+TGG | + | chr4.2:76669665-76669684 | MS.gene82160:intron | 30.0% |
! | AGAAGCCTTTTAGCAAAATA+GGG | - | chr4.2:76671923-76671942 | None:intergenic | 30.0% |
! | ATATGCTGATCCCAATTTTA+AGG | + | chr4.2:76671880-76671899 | MS.gene82160:CDS | 30.0% |
! | CATACTATGCGTTGATATTA+AGG | + | chr4.2:76671828-76671847 | MS.gene82160:CDS | 30.0% |
! | CATATCCCTATTTTGCTAAA+AGG | + | chr4.2:76671915-76671934 | MS.gene82160:CDS | 30.0% |
! | CTTTTTCTTACCTGTAGTAT+CGG | - | chr4.2:76672715-76672734 | None:intergenic | 30.0% |
! | GATATTATGCTAGAGTATCT+TGG | - | chr4.2:76670553-76670572 | None:intergenic | 30.0% |
! | TAGAAGCCTTTTAGCAAAAT+AGG | - | chr4.2:76671924-76671943 | None:intergenic | 30.0% |
! | TAGGTTGAATAGTAAATTCG+AGG | - | chr4.2:76669189-76669208 | None:intergenic | 30.0% |
! | TTCAAGTTAGAACCAATTCA+GGG | - | chr4.2:76669146-76669165 | None:intergenic | 30.0% |
! | TTTTGCTAAAAGGCTTCTAA+CGG | + | chr4.2:76671925-76671944 | MS.gene82160:CDS | 30.0% |
!! | AACTTGCTTTTCTTGATTTC+GGG | + | chr4.2:76671233-76671252 | MS.gene82160:CDS | 30.0% |
!! | ACTATTTCATTTTGGGTGTT+TGG | + | chr4.2:76669397-76669416 | MS.gene82160:intron | 30.0% |
!! | GTGTTTAATTTGGGTTCATT+TGG | + | chr4.2:76668746-76668765 | MS.gene82160:CDS | 30.0% |
!! | TTAATGTTTGGTTCCACTTT+TGG | + | chr4.2:76669044-76669063 | MS.gene82160:intron | 30.0% |
!! | TTACCTTCAATCTGAAGTTT+TGG | + | chr4.2:76672789-76672808 | MS.gene82160:intron | 30.0% |
!!! | ATGGTTTTAAATTGCGGTTA+CGG | + | chr4.2:76669684-76669703 | MS.gene82160:intron | 30.0% |
!!! | CACGGTTTTTTCCATTATAA+AGG | - | chr4.2:76670676-76670695 | None:intergenic | 30.0% |
!!! | CTTAGTTCCTGATGTTTTTT+GGG | + | chr4.2:76671009-76671028 | MS.gene82160:CDS | 30.0% |
!!! | GTGATTATTTTTTGTGGGTT+TGG | + | chr4.2:76668119-76668138 | MS.gene82160:intron | 30.0% |
!!! | TCTTAGTTCCTGATGTTTTT+TGG | + | chr4.2:76671008-76671027 | MS.gene82160:CDS | 30.0% |
!!! | TGAAGCATGGTTTTAAATTG+CGG | + | chr4.2:76669678-76669697 | MS.gene82160:intron | 30.0% |
AAAATACAAGGCACACATCA+CGG | - | chr4.2:76670855-76670874 | None:intergenic | 35.0% | |
AAACTTGAGCAAAACTGCAA+AGG | - | chr4.2:76670771-76670790 | None:intergenic | 35.0% | |
AACGGATAAAATGGAAAGGA+GGG | - | chr4.2:76672079-76672098 | None:intergenic | 35.0% | |
AACTTGAGCAAAACTGCAAA+GGG | - | chr4.2:76670770-76670789 | None:intergenic | 35.0% | |
AATATCAACGCATAGTATGC+TGG | - | chr4.2:76671827-76671846 | None:intergenic | 35.0% | |
AATCTGTATTAGTGCTTCGT+AGG | - | chr4.2:76671587-76671606 | None:intergenic | 35.0% | |
AGAGTTTGACCAAATTACAG+TGG | + | chr4.2:76669553-76669572 | MS.gene82160:intron | 35.0% | |
AGCTGATATGGTCTAAATTG+CGG | + | chr4.2:76669750-76669769 | MS.gene82160:intron | 35.0% | |
AGGAAAAAGACCAATAACTC+CGG | + | chr4.2:76672248-76672267 | MS.gene82160:intron | 35.0% | |
ATGATCAAGAAGCAATTGAG+AGG | + | chr4.2:76671086-76671105 | MS.gene82160:CDS | 35.0% | |
ATGCTCTTGATTTCTTATCC+AGG | + | chr4.2:76671353-76671372 | MS.gene82160:CDS | 35.0% | |
ATGCTGTGACCTTTATATTG+CGG | + | chr4.2:76669709-76669728 | MS.gene82160:intron | 35.0% | |
CATAAATGTCTGTGCTACAA+AGG | + | chr4.2:76668557-76668576 | MS.gene82160:intron | 35.0% | |
CATTGAAGAAGCTATAGGAT+TGG | + | chr4.2:76670204-76670223 | MS.gene82160:CDS | 35.0% | |
CCATGAATCCATGAAGAAAT+GGG | - | chr4.2:76667777-76667796 | None:intergenic | 35.0% | |
CGCTTTCTTATGCAATTACT+TGG | + | chr4.2:76673586-76673605 | MS.gene82160:CDS | 35.0% | |
GAAACTGAACTTTGTGATGA+TGG | - | chr4.2:76667900-76667919 | None:intergenic | 35.0% | |
GAAGCGAGATATGCAATAAT+TGG | + | chr4.2:76671277-76671296 | MS.gene82160:CDS | 35.0% | |
GAGATCAAGTGATTAGGATA+TGG | + | chr4.2:76672644-76672663 | MS.gene82160:CDS | 35.0% | |
GAGTTGCTGATCAGAATAAA+AGG | + | chr4.2:76668798-76668817 | MS.gene82160:CDS | 35.0% | |
GCATCTCTTAGATATGGATT+TGG | - | chr4.2:76671953-76671972 | None:intergenic | 35.0% | |
GTAAAGCACACAAATGATCA+AGG | - | chr4.2:76669987-76670006 | None:intergenic | 35.0% | |
GTATAGTCCCAAAAAACATC+AGG | - | chr4.2:76671019-76671038 | None:intergenic | 35.0% | |
GTTATTTACACCGGAGTTAT+TGG | - | chr4.2:76672261-76672280 | None:intergenic | 35.0% | |
TAACTAAGGACACAATTGTG+AGG | - | chr4.2:76673096-76673115 | None:intergenic | 35.0% | |
TACTCAGATGGACAAATATC+AGG | - | chr4.2:76668905-76668924 | None:intergenic | 35.0% | |
TAGAGATTTCTCTGCTAAAG+AGG | + | chr4.2:76672399-76672418 | MS.gene82160:CDS | 35.0% | |
TAGGTCAGGTTTATAAAGCT+CGG | + | chr4.2:76670134-76670153 | MS.gene82160:CDS | 35.0% | |
TATCTTGAAGCAACAAGTTG+AGG | - | chr4.2:76668044-76668063 | None:intergenic | 35.0% | |
TCAAAAAAGTTTCGAAGTGC+AGG | - | chr4.2:76671403-76671422 | None:intergenic | 35.0% | |
TCAAAAAGTCAGGAACATAC+CGG | - | chr4.2:76672546-76672565 | None:intergenic | 35.0% | |
TCAGTTTCTGACATCATAAG+TGG | - | chr4.2:76672601-76672620 | None:intergenic | 35.0% | |
TCTACCTCATTAGAGGTTTA+GGG | + | chr4.2:76670230-76670249 | MS.gene82160:CDS | 35.0% | |
TGACCCAATTTGACAAAAGT+TGG | - | chr4.2:76668866-76668885 | None:intergenic | 35.0% | |
TGATGAGGTGAGATTTGAAA+TGG | - | chr4.2:76667808-76667827 | None:intergenic | 35.0% | |
TGATTTGAAAGAGAGTGATG+AGG | - | chr4.2:76667823-76667842 | None:intergenic | 35.0% | |
TGCTCTTGATTTCTTATCCA+GGG | + | chr4.2:76671354-76671373 | MS.gene82160:CDS | 35.0% | |
TTCTACCTCATTAGAGGTTT+AGG | + | chr4.2:76670229-76670248 | MS.gene82160:CDS | 35.0% | |
TTGAGGTCAAAACACAACAT+TGG | - | chr4.2:76673022-76673041 | None:intergenic | 35.0% | |
TTTATAAAGCTCGGTTGAAG+CGG | + | chr4.2:76670143-76670162 | MS.gene82160:CDS | 35.0% | |
! | AAATTTGCTTCCTCCAAAAG+TGG | - | chr4.2:76669060-76669079 | None:intergenic | 35.0% |
! | ACACCTTCAATCAAAAGTGT+CGG | + | chr4.2:76671684-76671703 | MS.gene82160:intron | 35.0% |
! | ACTTTTGTCAAATTGGGTCA+AGG | + | chr4.2:76668866-76668885 | MS.gene82160:CDS | 35.0% |
! | ATCAGAGCATCTCTTAGATA+TGG | - | chr4.2:76671959-76671978 | None:intergenic | 35.0% |
! | ATCATAGTGCCACTGTAATT+TGG | - | chr4.2:76669565-76669584 | None:intergenic | 35.0% |
! | ATCTAAGTGTTGTATCTGTG+TGG | + | chr4.2:76671658-76671677 | MS.gene82160:intron | 35.0% |
! | CTTTTGTCAAATTGGGTCAA+GGG | + | chr4.2:76668867-76668886 | MS.gene82160:CDS | 35.0% |
! | GATGAGGTGAGATTTGAAAT+GGG | - | chr4.2:76667807-76667826 | None:intergenic | 35.0% |
! | GGACCAACTTTTGTCAAATT+GGG | + | chr4.2:76668860-76668879 | MS.gene82160:CDS | 35.0% |
! | GTTCAAGTTAGAACCAATTC+AGG | - | chr4.2:76669147-76669166 | None:intergenic | 35.0% |
! | TGCATTTTGCCGCAATATAA+AGG | - | chr4.2:76669721-76669740 | None:intergenic | 35.0% |
! | TGGACCAACTTTTGTCAAAT+TGG | + | chr4.2:76668859-76668878 | MS.gene82160:CDS | 35.0% |
!! | AACTGATTTTGTCCCTGAAT+TGG | + | chr4.2:76669131-76669150 | MS.gene82160:intron | 35.0% |
!! | AGAAATGGGTTGTTGAGATA+TGG | - | chr4.2:76667763-76667782 | None:intergenic | 35.0% |
!! | ATATGGTTCTAAACCCTTCA+AGG | + | chr4.2:76668061-76668080 | MS.gene82160:CDS | 35.0% |
!! | CAACTTGTTGCTTCAAGATA+TGG | + | chr4.2:76668044-76668063 | MS.gene82160:CDS | 35.0% |
!! | CTTGAAAACCTTCTAGTTCA+GGG | + | chr4.2:76672367-76672386 | MS.gene82160:CDS | 35.0% |
!! | GAATTGTGTTGATCCGTTTT+TGG | + | chr4.2:76668686-76668705 | MS.gene82160:intron | 35.0% |
!! | GTATCTGAAGCTTTTACTCT+CGG | + | chr4.2:76672502-76672521 | MS.gene82160:CDS | 35.0% |
!! | TATGTGCAGGTTAGTTCTTT+TGG | + | chr4.2:76670343-76670362 | MS.gene82160:intron | 35.0% |
!! | TTGAAAACCTTCTAGTTCAG+GGG | + | chr4.2:76672368-76672387 | MS.gene82160:CDS | 35.0% |
!! | TTTTCAAGGATGGAAAGTTC+AGG | + | chr4.2:76671987-76672006 | MS.gene82160:CDS | 35.0% |
!!! | ATTGAGTTGCTTTTCAAGGA+TGG | + | chr4.2:76671977-76671996 | MS.gene82160:CDS | 35.0% |
!!! | ATTTGGGTTGAAGCTTTTGT+GGG | + | chr4.2:76668763-76668782 | MS.gene82160:CDS | 35.0% |
!!! | CGTTTTTGGTTTTGTTGTGT+AGG | + | chr4.2:76668700-76668719 | MS.gene82160:intron | 35.0% |
!!! | TCTGATTGAGTTGCTTTTCA+AGG | + | chr4.2:76671973-76671992 | MS.gene82160:CDS | 35.0% |
!!! | TGATTTTTTTCCGATGCAGA+TGG | + | chr4.2:76672338-76672357 | MS.gene82160:intron | 35.0% |
AACTTCAAGACGATTGTGGA+CGG | + | chr4.2:76671454-76671473 | MS.gene82160:CDS | 40.0% | |
AAGAAGCAATTGAGAGGCAA+GGG | + | chr4.2:76671092-76671111 | MS.gene82160:CDS | 40.0% | |
AATTGGTCACGTTGTTCACT+TGG | + | chr4.2:76671294-76671313 | MS.gene82160:CDS | 40.0% | |
ACAAGGTTCCTCAAAAAGTC+AGG | - | chr4.2:76672556-76672575 | None:intergenic | 40.0% | |
ACCTAAAGATGGTTCCCTTA+AGG | + | chr4.2:76667932-76667951 | MS.gene82160:CDS | 40.0% | |
AGCTCAGAGATCAAGTGATT+AGG | + | chr4.2:76672638-76672657 | MS.gene82160:CDS | 40.0% | |
AGGAACATACCGGTATGTTT+CGG | - | chr4.2:76672536-76672555 | None:intergenic | 40.0% | |
ATTAAGGTCTCTCACTGTTC+TGG | + | chr4.2:76671844-76671863 | MS.gene82160:CDS | 40.0% | |
ATTGCATATCTCGCTTCTTC+TGG | - | chr4.2:76671274-76671293 | None:intergenic | 40.0% | |
ATTTGGTCAAACTCTCCTTG+AGG | - | chr4.2:76669548-76669567 | None:intergenic | 40.0% | |
CAACGGATAAAATGGAAAGG+AGG | - | chr4.2:76672080-76672099 | None:intergenic | 40.0% | |
CAGCATGAATATCATCAGCA+CGG | - | chr4.2:76667977-76667996 | None:intergenic | 40.0% | |
CCCATTTCTTCATGGATTCA+TGG | + | chr4.2:76667774-76667793 | MS.gene82160:CDS | 40.0% | |
CTATAGCTTCTTCAATGCCA+GGG | - | chr4.2:76670201-76670220 | None:intergenic | 40.0% | |
CTCAAAGCTAAGTGTGTGTT+TGG | - | chr4.2:76669307-76669326 | None:intergenic | 40.0% | |
CTCAACAACCCATTTCTTCA+TGG | + | chr4.2:76667766-76667785 | MS.gene82160:CDS | 40.0% | |
CTTTAGGTGTAAGTCGTTCA+CGG | - | chr4.2:76670694-76670713 | None:intergenic | 40.0% | |
GAAACCCTAAACCTCTAATG+AGG | - | chr4.2:76670237-76670256 | None:intergenic | 40.0% | |
GAATGCATTGAGAGGGAATT+AGG | + | chr4.2:76670052-76670071 | MS.gene82160:CDS | 40.0% | |
GCACAATTTCCGAAACATAC+CGG | + | chr4.2:76672524-76672543 | MS.gene82160:CDS | 40.0% | |
GCACCAAAACTTCAGATTGA+AGG | - | chr4.2:76672795-76672814 | None:intergenic | 40.0% | |
GCAGAAAAATGCAGCTGATA+TGG | + | chr4.2:76669738-76669757 | MS.gene82160:intron | 40.0% | |
GCAGCAAGCACCTTAAAATT+GGG | - | chr4.2:76671893-76671912 | None:intergenic | 40.0% | |
GCCATGAATCCATGAAGAAA+TGG | - | chr4.2:76667778-76667797 | None:intergenic | 40.0% | |
GCTTAACTTCAAGACGATTG+TGG | + | chr4.2:76671450-76671469 | MS.gene82160:CDS | 40.0% | |
GTCTTGGATCTAGTAAACAG+CGG | + | chr4.2:76671121-76671140 | MS.gene82160:CDS | 40.0% | |
TACAACTATGACCGCAATAC+AGG | - | chr4.2:76669804-76669823 | None:intergenic | 40.0% | |
TCAAAACACAACATTGGCGA+AGG | - | chr4.2:76673016-76673035 | None:intergenic | 40.0% | |
TCAAGAGCTTAACTATGTGC+AGG | + | chr4.2:76670330-76670349 | MS.gene82160:CDS | 40.0% | |
TCAGAATCTGCGAGAAAGTT+AGG | - | chr4.2:76671758-76671777 | None:intergenic | 40.0% | |
TGAACGACTTACACCTAAAG+CGG | + | chr4.2:76670694-76670713 | MS.gene82160:intron | 40.0% | |
TGCAGCAAGCACCTTAAAAT+TGG | - | chr4.2:76671894-76671913 | None:intergenic | 40.0% | |
TGCTGATGATATTCATGCTG+AGG | + | chr4.2:76667977-76667996 | MS.gene82160:CDS | 40.0% | |
TGGAGATACATCAATATCCC+TGG | - | chr4.2:76671374-76671393 | None:intergenic | 40.0% | |
TGTCTTCAATGGCAATGCAA+AGG | + | chr4.2:76672573-76672592 | MS.gene82160:CDS | 40.0% | |
TTCCCTCTCAATGCATTCAA+AGG | - | chr4.2:76670050-76670069 | None:intergenic | 40.0% | |
TTGAGGAACCTTGTCTTCAA+TGG | + | chr4.2:76672562-76672581 | MS.gene82160:CDS | 40.0% | |
TTGCATTGCCATTGAAGACA+AGG | - | chr4.2:76672573-76672592 | None:intergenic | 40.0% | |
TTGGACTTCTACCTCATTAG+AGG | + | chr4.2:76670223-76670242 | MS.gene82160:CDS | 40.0% | |
TTGTCCATCTGAGTATCTTG+AGG | + | chr4.2:76668910-76668929 | MS.gene82160:CDS | 40.0% | |
TTGTGTGCTTTACCTTTACC+AGG | + | chr4.2:76669994-76670013 | MS.gene82160:intron | 40.0% | |
TTTCGAAGTGCAGGAACAAT+TGG | - | chr4.2:76671394-76671413 | None:intergenic | 40.0% | |
! | AATCTTTTGGCAACACCAGA+GGG | + | chr4.2:76671208-76671227 | MS.gene82160:CDS | 40.0% |
! | AGAAAAGCAAGTTTTCCCTC+TGG | - | chr4.2:76671226-76671245 | None:intergenic | 40.0% |
! | GGTATGTTCCTGACTTTTTG+AGG | + | chr4.2:76672545-76672564 | MS.gene82160:CDS | 40.0% |
! | TAATCTTTTGGCAACACCAG+AGG | + | chr4.2:76671207-76671226 | MS.gene82160:CDS | 40.0% |
! | TCCTCATCCTGGTAATCTTT+TGG | + | chr4.2:76671195-76671214 | MS.gene82160:CDS | 40.0% |
! | TCTTTTGCTACCGATACTAC+AGG | + | chr4.2:76672702-76672721 | MS.gene82160:CDS | 40.0% |
! | TGTTGAGATATGGTGGAAGA+AGG | - | chr4.2:76667753-76667772 | None:intergenic | 40.0% |
! | TTTTCCGATGCAGATGGAAT+AGG | + | chr4.2:76672344-76672363 | MS.gene82160:intron | 40.0% |
!! | AAGGTATTGTTGAGTCCTGA+TGG | + | chr4.2:76672439-76672458 | MS.gene82160:CDS | 40.0% |
!! | AATGGGTTGTTGAGATATGG+TGG | - | chr4.2:76667760-76667779 | None:intergenic | 40.0% |
!! | AGTATCGGTAGCAAAAGAGA+TGG | - | chr4.2:76672700-76672719 | None:intergenic | 40.0% |
!! | ATGTTTGGTTCCACTTTTGG+AGG | + | chr4.2:76669047-76669066 | MS.gene82160:intron | 40.0% |
!! | CATTATAAAGGTGCCTCGTT+GGG | - | chr4.2:76670664-76670683 | None:intergenic | 40.0% |
!! | GAAGGTACTAACGATCGATT+GGG | + | chr4.2:76671045-76671064 | MS.gene82160:CDS | 40.0% |
!! | GCTTGAAAACCTTCTAGTTC+AGG | + | chr4.2:76672366-76672385 | MS.gene82160:CDS | 40.0% |
!! | TAATTTTGACAGGTTCCTGC+AGG | + | chr4.2:76670934-76670953 | MS.gene82160:intron | 40.0% |
!! | TCCTTAGTTAAAAGGCGCTT+CGG | + | chr4.2:76673106-76673125 | MS.gene82160:intron | 40.0% |
!!! | CATTTGGGTTGAAGCTTTTG+TGG | + | chr4.2:76668762-76668781 | MS.gene82160:CDS | 40.0% |
!!! | TGGTTTTGTTGTGTAGGTTG+CGG | + | chr4.2:76668706-76668725 | MS.gene82160:intron | 40.0% |
AAAGCAGTGCAGCAAACTTG+AGG | - | chr4.2:76673039-76673058 | None:intergenic | 45.0% | |
ACATGTGTTGGACACTAGCA+TGG | + | chr4.2:76668498-76668517 | MS.gene82160:intron | 45.0% | |
ACATGTGTTGGACACTGACA+CGG | + | chr4.2:76668288-76668307 | MS.gene82160:intron | 45.0% | |
ACCTAAAGCGGACAATACCT+CGG | + | chr4.2:76670706-76670725 | MS.gene82160:intron | 45.0% | |
ACGCCTTTGAATGCATTGAG+AGG | + | chr4.2:76670044-76670063 | MS.gene82160:CDS | 45.0% | |
AGACCTCATCTCCTGTATTG+CGG | + | chr4.2:76669790-76669809 | MS.gene82160:intron | 45.0% | |
AGCTCCTCAAGATACTCAGA+TGG | - | chr4.2:76668917-76668936 | None:intergenic | 45.0% | |
ATATCATCAGCACGGTCCAT+TGG | - | chr4.2:76667969-76667988 | None:intergenic | 45.0% | |
ATCCTTACTGATCCGGACAA+GGG | - | chr4.2:76673280-76673299 | None:intergenic | 45.0% | |
ATGCTGGAACTGCAAACAGA+TGG | - | chr4.2:76671811-76671830 | None:intergenic | 45.0% | |
CAAGAAGCAATTGAGAGGCA+AGG | + | chr4.2:76671091-76671110 | MS.gene82160:CDS | 45.0% | |
CAAGCCTATTCCATCTGCAT+CGG | - | chr4.2:76672351-76672370 | None:intergenic | 45.0% | |
CAAGGTCATCCTTACTGATC+CGG | - | chr4.2:76673287-76673306 | None:intergenic | 45.0% | |
CAGGACTCAACAATACCTTC+AGG | - | chr4.2:76672438-76672457 | None:intergenic | 45.0% | |
CATAAGTGTCTGTGCTACAG+AGG | + | chr4.2:76668336-76668355 | MS.gene82160:intron | 45.0% | |
CCTAAACTAGCAGCAGCTAT+CGG | - | chr4.2:76670118-76670137 | None:intergenic | 45.0% | |
CCTATAGCTTCTTCAATGCC+AGG | - | chr4.2:76670202-76670221 | None:intergenic | 45.0% | |
CGCCTTTGAATGCATTGAGA+GGG | + | chr4.2:76670045-76670064 | MS.gene82160:CDS | 45.0% | |
CTCAACAATACCTTCAGGAC+AGG | - | chr4.2:76672433-76672452 | None:intergenic | 45.0% | |
GAAATGTTGGCAAACCATCC+TGG | - | chr4.2:76670015-76670034 | None:intergenic | 45.0% | |
GCCAAAAGATTACCAGGATG+AGG | - | chr4.2:76671199-76671218 | None:intergenic | 45.0% | |
GCCTTAAGGGAACCATCTTT+AGG | - | chr4.2:76667936-76667955 | None:intergenic | 45.0% | |
GTATTGGAACAGTATCCCTG+CGG | + | chr4.2:76673199-76673218 | MS.gene82160:intron | 45.0% | |
GTGCTTTACCTTTACCAGGA+TGG | + | chr4.2:76669998-76670017 | MS.gene82160:intron | 45.0% | |
GTTGACTATTTCGTGCCTCA+AGG | + | chr4.2:76669530-76669549 | MS.gene82160:intron | 45.0% | |
GTTTGGATTCAAGGTGAGCT+TGG | - | chr4.2:76669647-76669666 | None:intergenic | 45.0% | |
TAACCGAGACTACGAAGCTA+TGG | + | chr4.2:76671318-76671337 | MS.gene82160:CDS | 45.0% | |
TAAGGCTCTTGCACTTCCAA+TGG | + | chr4.2:76667950-76667969 | MS.gene82160:CDS | 45.0% | |
TACCTTCAGGACAGGTTGTA+AGG | - | chr4.2:76672425-76672444 | None:intergenic | 45.0% | |
TATCGGCGATGGAGATATTG+TGG | - | chr4.2:76670101-76670120 | None:intergenic | 45.0% | |
TCATGCTGAGGCAAAAGCTT+TGG | + | chr4.2:76667989-76668008 | MS.gene82160:CDS | 45.0% | |
TGAGGCACGAAATAGTCAAC+AGG | - | chr4.2:76669530-76669549 | None:intergenic | 45.0% | |
TGGTGTGTGAACATCGTATC+TGG | - | chr4.2:76668457-76668476 | None:intergenic | 45.0% | |
TTCCTCAGAACTTCACCATC+AGG | - | chr4.2:76672457-76672476 | None:intergenic | 45.0% | |
TTGGCAAACCATCCTGGTAA+AGG | - | chr4.2:76670009-76670028 | None:intergenic | 45.0% | |
TTGGGACTATACAAGTGCGA+AGG | + | chr4.2:76671027-76671046 | MS.gene82160:CDS | 45.0% | |
TTGTCTGGGAAACGAGTCTA+AGG | - | chr4.2:76673163-76673182 | None:intergenic | 45.0% | |
TTTCGAGGATTGTCTGCTTC+AGG | + | chr4.2:76673058-76673077 | MS.gene82160:intron | 45.0% | |
TTTGCCAACATTTCCTGACG+AGG | + | chr4.2:76670021-76670040 | MS.gene82160:CDS | 45.0% | |
! | CCAACGAGGCACCTTTATAA+TGG | + | chr4.2:76670662-76670681 | MS.gene82160:intron | 45.0% |
! | CCTGGCATTGAAGAAGCTAT+AGG | + | chr4.2:76670199-76670218 | MS.gene82160:CDS | 45.0% |
! | CTTTTCTCCCCTGAACTAGA+AGG | - | chr4.2:76672378-76672397 | None:intergenic | 45.0% |
! | CTTTTGTGGGAGCAGAGAAA+TGG | + | chr4.2:76668776-76668795 | MS.gene82160:CDS | 45.0% |
! | GGTGTTGCCAAAAGATTACC+AGG | - | chr4.2:76671205-76671224 | None:intergenic | 45.0% |
! | GTGGGTGTTGTACTAGAACA+GGG | - | chr4.2:76670632-76670651 | None:intergenic | 45.0% |
! | TGGAAGTGCAAGAGCCTTAA+GGG | - | chr4.2:76667949-76667968 | None:intergenic | 45.0% |
! | TGTGGGTGTTGTACTAGAAC+AGG | - | chr4.2:76670633-76670652 | None:intergenic | 45.0% |
! | TTGGAAGTGCAAGAGCCTTA+AGG | - | chr4.2:76667950-76667969 | None:intergenic | 45.0% |
!! | AAAATCATGGTGTCACACCG+TGG | + | chr4.2:76669616-76669635 | MS.gene82160:intron | 45.0% |
!! | ACCGAAGCGCCTTTTAACTA+AGG | - | chr4.2:76673110-76673129 | None:intergenic | 45.0% |
!! | CCATTATAAAGGTGCCTCGT+TGG | - | chr4.2:76670665-76670684 | None:intergenic | 45.0% |
!! | CGAAGGTACTAACGATCGAT+TGG | + | chr4.2:76671044-76671063 | MS.gene82160:CDS | 45.0% |
!! | GCACCGACACTTTTGATTGA+AGG | - | chr4.2:76671690-76671709 | None:intergenic | 45.0% |
!! | TAGTTAAAAGGCGCTTCGGT+GGG | + | chr4.2:76673110-76673129 | MS.gene82160:intron | 45.0% |
!! | TTAGTTAAAAGGCGCTTCGG+TGG | + | chr4.2:76673109-76673128 | MS.gene82160:intron | 45.0% |
!! | TTCACAGTTTCGTGCTGCTT+TGG | + | chr4.2:76667863-76667882 | MS.gene82160:CDS | 45.0% |
!!! | GGTTTTGTTGTGTAGGTTGC+GGG | + | chr4.2:76668707-76668726 | MS.gene82160:intron | 45.0% |
!!! | TTTGCTGCACTGCTTTTTCG+AGG | + | chr4.2:76673043-76673062 | MS.gene82160:intron | 45.0% |
!!! | AATATTTTTTTTTTTTTGAA+TGG | + | chr4.2:76673431-76673450 | MS.gene82160:intron | 5.0% |
AACCTGAGGCCCGTAAACTT+GGG | + | chr4.2:76673524-76673543 | MS.gene82160:CDS | 50.0% | |
AAGACGATTGTGGACGGTCT+CGG | + | chr4.2:76671460-76671479 | MS.gene82160:CDS | 50.0% | |
CATCCTTACTGATCCGGACA+AGG | - | chr4.2:76673281-76673300 | None:intergenic | 50.0% | |
CGATGCTGACATTGACACAC+AGG | + | chr4.2:76671619-76671638 | MS.gene82160:intron | 50.0% | |
CTAACGATCGATTGGGTCGA+AGG | + | chr4.2:76671052-76671071 | MS.gene82160:CDS | 50.0% | |
CTCAGACAACTGCTCGAGTA+CGG | + | chr4.2:76671157-76671176 | MS.gene82160:CDS | 50.0% | |
GAGCCATAGCTTCGTAGTCT+CGG | - | chr4.2:76671324-76671343 | None:intergenic | 50.0% | |
GAGGCAAGGGCTTAATGTCT+TGG | + | chr4.2:76671105-76671124 | MS.gene82160:CDS | 50.0% | |
GAGGCTAAGGAGTTAGAGGA+TGG | + | chr4.2:76673224-76673243 | MS.gene82160:intron | 50.0% | |
GTGTTGGACACTAGCATGGA+TGG | + | chr4.2:76668502-76668521 | MS.gene82160:intron | 50.0% | |
TAAAGCTCGGTTGAAGCGGT+CGG | + | chr4.2:76670147-76670166 | MS.gene82160:CDS | 50.0% | |
TACCAGGATGAGGATCAGCA+TGG | - | chr4.2:76671189-76671208 | None:intergenic | 50.0% | |
TCCTTACTGATCCGGACAAG+GGG | - | chr4.2:76673279-76673298 | None:intergenic | 50.0% | |
TGACCGCAATACAGGAGATG+AGG | - | chr4.2:76669796-76669815 | None:intergenic | 50.0% | |
TGCAGGAGGGACAAAATGCA+AGG | + | chr4.2:76670951-76670970 | MS.gene82160:intron | 50.0% | |
TGTTGGACACTGACACGGAT+AGG | + | chr4.2:76668293-76668312 | MS.gene82160:intron | 50.0% | |
TGTTGTGTAGGTTGCGGGAA+GGG | + | chr4.2:76668712-76668731 | MS.gene82160:intron | 50.0% | |
TTCCATGCTGATCCTCATCC+TGG | + | chr4.2:76671184-76671203 | MS.gene82160:CDS | 50.0% | |
TTGTTGTGTAGGTTGCGGGA+AGG | + | chr4.2:76668711-76668730 | MS.gene82160:intron | 50.0% | |
TTTGACAGGTTCCTGCAGGA+GGG | + | chr4.2:76670938-76670957 | MS.gene82160:intron | 50.0% | |
! | AGCTGCTGCTAGTTTAGGTC+AGG | + | chr4.2:76670120-76670139 | MS.gene82160:CDS | 50.0% |
! | AGGTCTCTCACTGTTCTGGA+AGG | + | chr4.2:76671848-76671867 | MS.gene82160:CDS | 50.0% |
! | CCGATAGCTGCTGCTAGTTT+AGG | + | chr4.2:76670115-76670134 | MS.gene82160:CDS | 50.0% |
! | GTCCTGATGGTGAAGTTCTG+AGG | + | chr4.2:76672452-76672471 | MS.gene82160:CDS | 50.0% |
! | TTGCATTTTGTCCCTCCTGC+AGG | - | chr4.2:76670952-76670971 | None:intergenic | 50.0% |
! | TTTTGACAGGTTCCTGCAGG+AGG | + | chr4.2:76670937-76670956 | MS.gene82160:intron | 50.0% |
!! | TCCGAGGTATTGTCCGCTTT+AGG | - | chr4.2:76670710-76670729 | None:intergenic | 50.0% |
AAAGCTCGGTTGAAGCGGTC+GGG | + | chr4.2:76670148-76670167 | MS.gene82160:CDS | 55.0% | |
AACACGCCCCCCAAGTTTAC+GGG | - | chr4.2:76673536-76673555 | None:intergenic | 55.0% | |
AATGCGGTGTGGCGTACTTG+AGG | + | chr4.2:76670729-76670748 | MS.gene82160:intron | 55.0% | |
ACAGGTGCTTCAGCAACCTG+AGG | + | chr4.2:76673510-76673529 | MS.gene82160:intron | 55.0% | |
ACCTGAGGCCCGTAAACTTG+GGG | + | chr4.2:76673525-76673544 | MS.gene82160:CDS | 55.0% | |
AGGAGATGAGGTCTCCGCAA+CGG | - | chr4.2:76669784-76669803 | None:intergenic | 55.0% | |
AGGTGAGCTTGGCTGAACCA+CGG | - | chr4.2:76669636-76669655 | None:intergenic | 55.0% | |
ATGCGGTGTGGCGTACTTGA+GGG | + | chr4.2:76670730-76670749 | MS.gene82160:intron | 55.0% | |
CAACACGCCCCCCAAGTTTA+CGG | - | chr4.2:76673537-76673556 | None:intergenic | 55.0% | |
CAACCTGAGGCCCGTAAACT+TGG | + | chr4.2:76673523-76673542 | MS.gene82160:CDS | 55.0% | |
CAATACCTCGGAATGCGGTG+TGG | + | chr4.2:76670718-76670737 | MS.gene82160:intron | 55.0% | |
CCTTACTGATCCGGACAAGG+GGG | - | chr4.2:76673278-76673297 | None:intergenic | 55.0% | |
CTTACTGATCCGGACAAGGG+GGG | - | chr4.2:76673277-76673296 | None:intergenic | 55.0% | |
GCGGACAATACCTCGGAATG+CGG | + | chr4.2:76670713-76670732 | MS.gene82160:intron | 55.0% | |
GCGTCCTCGTCAGGAAATGT+TGG | - | chr4.2:76670028-76670047 | None:intergenic | 55.0% | |
GGCCTTACAACCTGTCCTGA+AGG | + | chr4.2:76672420-76672439 | MS.gene82160:CDS | 55.0% | |
GGGCAAAGTTGTTGCGGTCA+AGG | + | chr4.2:76670168-76670187 | MS.gene82160:CDS | 55.0% | |
GGTCGAGGCTAAGGAGTTAG+AGG | + | chr4.2:76673220-76673239 | MS.gene82160:intron | 55.0% | |
TGGGTCAAGGGCTGTCTACT+AGG | + | chr4.2:76668879-76668898 | MS.gene82160:CDS | 55.0% | |
TTAGCCCACGTGTGTGGCTT+AGG | + | chr4.2:76673251-76673270 | MS.gene82160:intron | 55.0% | |
! | AAACTTGGGGGGCGTGTTGT+CGG | + | chr4.2:76673538-76673557 | MS.gene82160:CDS | 55.0% |
!! | AAAGGTGCCTCGTTGGGTTG+AGG | - | chr4.2:76670658-76670677 | None:intergenic | 55.0% |
!! | CATTCAAAGGCGTCCTCGTC+AGG | - | chr4.2:76670037-76670056 | None:intergenic | 55.0% |
!! | CTCGTTGGGTTGAGGAGTGT+GGG | - | chr4.2:76670650-76670669 | None:intergenic | 55.0% |
AACTCCTTAGCCTCGACCGC+AGG | - | chr4.2:76673218-76673237 | None:intergenic | 60.0% | |
ACTCCTTAGCCTCGACCGCA+GGG | - | chr4.2:76673217-76673236 | None:intergenic | 60.0% | |
CCACACTCCTCAACCCAACG+AGG | + | chr4.2:76670648-76670667 | MS.gene82160:intron | 60.0% | |
CCCCCTTGTCCGGATCAGTA+AGG | + | chr4.2:76673275-76673294 | MS.gene82160:intron | 60.0% | |
CCTGAGGCCCGTAAACTTGG+GGG | + | chr4.2:76673526-76673545 | MS.gene82160:CDS | 60.0% | |
CTAGCAGCAGCTATCGGCGA+TGG | - | chr4.2:76670112-76670131 | None:intergenic | 60.0% | |
CTGAGGCCCGTAAACTTGGG+GGG | + | chr4.2:76673527-76673546 | MS.gene82160:CDS | 60.0% | |
CTTCTTCAATGCCAGGGCGC+TGG | - | chr4.2:76670195-76670214 | None:intergenic | 60.0% | |
GAACAGTATCCCTGCGGTCG+AGG | + | chr4.2:76673205-76673224 | MS.gene82160:intron | 60.0% | |
GCGGTCGGGCAAAGTTGTTG+CGG | + | chr4.2:76670162-76670181 | MS.gene82160:CDS | 60.0% | |
TATCCCTGCGGTCGAGGCTA+AGG | + | chr4.2:76673211-76673230 | MS.gene82160:intron | 60.0% | |
TTGCGGCTGTGATGCCGTTG+CGG | + | chr4.2:76669767-76669786 | MS.gene82160:intron | 60.0% | |
! | AGCCACACACGTGGGCTAAC+AGG | - | chr4.2:76673250-76673269 | None:intergenic | 60.0% |
!! | CCTCGTTGGGTTGAGGAGTG+TGG | - | chr4.2:76670651-76670670 | None:intergenic | 60.0% |
CCCCCAAGTTTACGGGCCTC+AGG | - | chr4.2:76673529-76673548 | None:intergenic | 65.0% | |
CGGTGTGGCGTACTTGAGGG+TGG | + | chr4.2:76670733-76670752 | MS.gene82160:intron | 65.0% | |
GGCCTGTTAGCCCACGTGTG+TGG | + | chr4.2:76673245-76673264 | MS.gene82160:intron | 65.0% | |
GGGGCCTAAGCCACACACGT+GGG | - | chr4.2:76673258-76673277 | None:intergenic | 65.0% | |
GTACGCCACACCGCATTCCG+AGG | - | chr4.2:76670726-76670745 | None:intergenic | 65.0% | |
TGGCTTAGGCCCCCCTTGTC+CGG | + | chr4.2:76673265-76673284 | MS.gene82160:intron | 65.0% | |
GGGGGCCTAAGCCACACACG+TGG | - | chr4.2:76673259-76673278 | None:intergenic | 70.0% | |
! | CTTGGGGGGCGTGTTGTCGG+TGG | + | chr4.2:76673541-76673560 | MS.gene82160:CDS | 70.0% |
GCGGTCAAGGTCCAGCGCCC+TGG | + | chr4.2:76670181-76670200 | MS.gene82160:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 76667735 | 76673633 | 76667735 | ID=MS.gene82160 |
chr4.2 | mRNA | 76667735 | 76673633 | 76667735 | ID=MS.gene82160.t1;Parent=MS.gene82160 |
chr4.2 | exon | 76667735 | 76668082 | 76667735 | ID=MS.gene82160.t1.exon1;Parent=MS.gene82160.t1 |
chr4.2 | CDS | 76667735 | 76668082 | 76667735 | ID=cds.MS.gene82160.t1;Parent=MS.gene82160.t1 |
chr4.2 | exon | 76668722 | 76668949 | 76668722 | ID=MS.gene82160.t1.exon2;Parent=MS.gene82160.t1 |
chr4.2 | CDS | 76668722 | 76668949 | 76668722 | ID=cds.MS.gene82160.t1;Parent=MS.gene82160.t1 |
chr4.2 | exon | 76670016 | 76670351 | 76670016 | ID=MS.gene82160.t1.exon3;Parent=MS.gene82160.t1 |
chr4.2 | CDS | 76670016 | 76670351 | 76670016 | ID=cds.MS.gene82160.t1;Parent=MS.gene82160.t1 |
chr4.2 | exon | 76670956 | 76671511 | 76670956 | ID=MS.gene82160.t1.exon4;Parent=MS.gene82160.t1 |
chr4.2 | CDS | 76670956 | 76671511 | 76670956 | ID=cds.MS.gene82160.t1;Parent=MS.gene82160.t1 |
chr4.2 | exon | 76671822 | 76672008 | 76671822 | ID=MS.gene82160.t1.exon5;Parent=MS.gene82160.t1 |
chr4.2 | CDS | 76671822 | 76672008 | 76671822 | ID=cds.MS.gene82160.t1;Parent=MS.gene82160.t1 |
chr4.2 | exon | 76672357 | 76672723 | 76672357 | ID=MS.gene82160.t1.exon6;Parent=MS.gene82160.t1 |
chr4.2 | CDS | 76672357 | 76672723 | 76672357 | ID=cds.MS.gene82160.t1;Parent=MS.gene82160.t1 |
chr4.2 | exon | 76673514 | 76673633 | 76673514 | ID=MS.gene82160.t1.exon7;Parent=MS.gene82160.t1 |
chr4.2 | CDS | 76673514 | 76673633 | 76673514 | ID=cds.MS.gene82160.t1;Parent=MS.gene82160.t1 |
Gene Sequence |
Protein sequence |