Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83835.t1 | XP_003624650.1 | 89.7 | 465 | 46 | 2 | 1 | 463 | 1 | 465 | 7.60E-241 | 842.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83835.t1 | O64470 | 35.5 | 462 | 280 | 11 | 1 | 455 | 1 | 451 | 4.0e-73 | 276.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83835.t1 | Q2HVM4 | 89.7 | 465 | 46 | 2 | 1 | 463 | 1 | 465 | 5.5e-241 | 842.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049404 | MS.gene83835 | 0.805827 | 1.11E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene83835 | 0.803068 | 4.16E-49 | -1.69E-46 |
| MS.gene049821 | MS.gene83835 | 0.810198 | 1.30E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene83835 | 0.815818 | 7.61E-52 | -1.69E-46 |
| MS.gene049825 | MS.gene83835 | 0.813168 | 2.93E-51 | -1.69E-46 |
| MS.gene049873 | MS.gene83835 | 0.810809 | 9.58E-51 | -1.69E-46 |
| MS.gene050020 | MS.gene83835 | 0.801133 | 1.04E-48 | -1.69E-46 |
| MS.gene05016 | MS.gene83835 | 0.807606 | 4.66E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene83835 | 0.820135 | 8.05E-53 | -1.69E-46 |
| MS.gene050561 | MS.gene83835 | 0.81652 | 5.30E-52 | -1.69E-46 |
| MS.gene050562 | MS.gene83835 | 0.807565 | 4.75E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene83835 | 0.8201 | 8.20E-53 | -1.69E-46 |
| MS.gene051198 | MS.gene83835 | 0.802001 | 6.90E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene83835 | 0.817214 | 3.70E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene83835 | 0.840928 | 6.47E-58 | -1.69E-46 |
| MS.gene051719 | MS.gene83835 | 0.830545 | 2.76E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene83835 | 0.828505 | 8.66E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene83835 | 0.823594 | 1.27E-53 | -1.69E-46 |
| MS.gene051957 | MS.gene83835 | 0.817668 | 2.93E-52 | -1.69E-46 |
| MS.gene052239 | MS.gene83835 | -0.81015 | 1.33E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene83835 | 0.811687 | 6.18E-51 | -1.69E-46 |
| MS.gene052582 | MS.gene83835 | 0.840015 | 1.12E-57 | -1.69E-46 |
| MS.gene052584 | MS.gene83835 | 0.829432 | 5.16E-55 | -1.69E-46 |
| MS.gene052773 | MS.gene83835 | 0.809442 | 1.89E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene83835 | 0.805973 | 1.03E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene83835 | 0.847688 | 9.87E-60 | -1.69E-46 |
| MS.gene053599 | MS.gene83835 | 0.827042 | 1.95E-54 | -1.69E-46 |
| MS.gene05364 | MS.gene83835 | 0.813102 | 3.03E-51 | -1.69E-46 |
| MS.gene05414 | MS.gene83835 | 0.801618 | 8.27E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene83835 | 0.821201 | 4.58E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene83835 | 0.832545 | 8.89E-56 | -1.69E-46 |
| MS.gene055227 | MS.gene83835 | 0.800965 | 1.13E-48 | -1.69E-46 |
| MS.gene055466 | MS.gene83835 | 0.807305 | 5.39E-50 | -1.69E-46 |
| MS.gene055512 | MS.gene83835 | 0.801196 | 1.01E-48 | -1.69E-46 |
| MS.gene055778 | MS.gene83835 | 0.826207 | 3.08E-54 | -1.69E-46 |
| MS.gene05604 | MS.gene83835 | 0.837864 | 4.04E-57 | -1.69E-46 |
| MS.gene056050 | MS.gene83835 | 0.806574 | 7.70E-50 | -1.69E-46 |
| MS.gene056173 | MS.gene83835 | 0.813751 | 2.18E-51 | -1.69E-46 |
| MS.gene056366 | MS.gene83835 | 0.812285 | 4.58E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene83835 | 0.818607 | 1.79E-52 | -1.69E-46 |
| MS.gene057060 | MS.gene83835 | 0.816153 | 6.40E-52 | -1.69E-46 |
| MS.gene057208 | MS.gene83835 | 0.802613 | 5.16E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene83835 | 0.812133 | 4.94E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene83835 | 0.81925 | 1.28E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene83835 | 0.832267 | 1.04E-55 | -1.69E-46 |
| MS.gene058625 | MS.gene83835 | 0.837965 | 3.81E-57 | -1.69E-46 |
| MS.gene058636 | MS.gene83835 | 0.803798 | 2.94E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene83835 | 0.838689 | 2.48E-57 | -1.69E-46 |
| MS.gene05954 | MS.gene83835 | 0.807204 | 5.67E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene83835 | 0.805118 | 1.56E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene83835 | 0.801915 | 7.19E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene83835 | 0.818754 | 1.66E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83835.t1 | MTR_7g086000 | 92.903 | 465 | 31 | 2 | 1 | 463 | 1 | 465 | 0.0 | 855 |
| MS.gene83835.t1 | MTR_7g085990 | 44.748 | 476 | 236 | 12 | 4 | 463 | 2 | 466 | 1.38e-132 | 391 |
| MS.gene83835.t1 | MTR_7g085930 | 44.444 | 477 | 236 | 12 | 4 | 463 | 6 | 470 | 1.71e-126 | 375 |
| MS.gene83835.t1 | MTR_7g085960 | 71.930 | 228 | 34 | 2 | 236 | 463 | 1 | 198 | 1.51e-113 | 332 |
| MS.gene83835.t1 | MTR_4g127650 | 38.829 | 461 | 259 | 13 | 4 | 455 | 10 | 456 | 2.79e-95 | 295 |
| MS.gene83835.t1 | MTR_3g049150 | 36.403 | 467 | 278 | 12 | 4 | 463 | 2 | 456 | 4.30e-94 | 292 |
| MS.gene83835.t1 | MTR_3g026950 | 37.339 | 466 | 262 | 14 | 4 | 455 | 2 | 451 | 1.63e-87 | 275 |
| MS.gene83835.t1 | MTR_4g013050 | 36.304 | 460 | 238 | 11 | 1 | 455 | 1 | 410 | 1.76e-87 | 273 |
| MS.gene83835.t1 | MTR_4g097090 | 37.582 | 455 | 262 | 13 | 10 | 455 | 15 | 456 | 3.77e-86 | 271 |
| MS.gene83835.t1 | MTR_4g007540 | 33.700 | 454 | 273 | 14 | 4 | 453 | 3 | 432 | 1.33e-79 | 254 |
| MS.gene83835.t1 | MTR_2g105330 | 33.040 | 454 | 275 | 14 | 4 | 453 | 3 | 431 | 1.34e-78 | 251 |
| MS.gene83835.t1 | MTR_8g075610 | 34.660 | 427 | 248 | 14 | 31 | 453 | 20 | 419 | 5.06e-77 | 246 |
| MS.gene83835.t1 | MTR_2g064495 | 32.599 | 454 | 277 | 14 | 4 | 453 | 3 | 431 | 5.94e-77 | 247 |
| MS.gene83835.t1 | MTR_3g098980 | 33.496 | 409 | 226 | 17 | 12 | 411 | 22 | 393 | 4.86e-55 | 189 |
| MS.gene83835.t1 | MTR_8g096530 | 32.134 | 417 | 242 | 13 | 2 | 411 | 5 | 387 | 6.09e-55 | 189 |
| MS.gene83835.t1 | MTR_7g027175 | 32.258 | 403 | 232 | 14 | 11 | 406 | 23 | 391 | 5.81e-51 | 179 |
| MS.gene83835.t1 | MTR_7g085970 | 59.864 | 147 | 30 | 4 | 43 | 188 | 8 | 126 | 1.15e-45 | 155 |
| MS.gene83835.t1 | MTR_1g040175 | 28.818 | 406 | 242 | 16 | 11 | 405 | 16 | 385 | 1.95e-40 | 150 |
| MS.gene83835.t1 | MTR_7g084940 | 28.066 | 424 | 267 | 14 | 2 | 419 | 14 | 405 | 1.77e-39 | 148 |
| MS.gene83835.t1 | MTR_7g084910 | 29.167 | 432 | 238 | 17 | 2 | 419 | 15 | 392 | 3.89e-39 | 147 |
| MS.gene83835.t1 | MTR_1g040215 | 27.228 | 404 | 251 | 14 | 12 | 406 | 17 | 386 | 5.60e-39 | 147 |
| MS.gene83835.t1 | MTR_3g049140 | 35.115 | 262 | 153 | 11 | 209 | 463 | 2 | 253 | 9.70e-39 | 141 |
| MS.gene83835.t1 | MTR_1g053315 | 28.976 | 459 | 276 | 19 | 2 | 439 | 16 | 445 | 1.22e-35 | 137 |
| MS.gene83835.t1 | MTR_5g090810 | 27.990 | 393 | 229 | 15 | 38 | 406 | 49 | 411 | 4.40e-34 | 133 |
| MS.gene83835.t1 | MTR_1g040195 | 27.342 | 395 | 234 | 18 | 73 | 453 | 55 | 410 | 8.01e-34 | 132 |
| MS.gene83835.t1 | MTR_5g090830 | 28.244 | 393 | 228 | 15 | 38 | 406 | 49 | 411 | 2.54e-33 | 131 |
| MS.gene83835.t1 | MTR_5g076700 | 25.785 | 446 | 278 | 17 | 11 | 439 | 17 | 426 | 8.13e-33 | 130 |
| MS.gene83835.t1 | MTR_7g114490 | 26.898 | 461 | 272 | 19 | 11 | 450 | 17 | 433 | 1.31e-32 | 130 |
| MS.gene83835.t1 | MTR_7g056087 | 25.000 | 456 | 290 | 16 | 1 | 439 | 1 | 421 | 3.74e-32 | 127 |
| MS.gene83835.t1 | MTR_1g081660 | 24.384 | 406 | 274 | 10 | 5 | 405 | 17 | 394 | 8.04e-32 | 127 |
| MS.gene83835.t1 | MTR_7g114470 | 25.893 | 448 | 276 | 18 | 11 | 439 | 18 | 428 | 1.11e-31 | 126 |
| MS.gene83835.t1 | MTR_3g086020 | 25.745 | 470 | 277 | 20 | 2 | 459 | 3 | 412 | 5.52e-31 | 124 |
| MS.gene83835.t1 | MTR_5g090880 | 25.822 | 426 | 257 | 16 | 4 | 406 | 24 | 413 | 6.42e-31 | 124 |
| MS.gene83835.t1 | MTR_1g040315 | 27.312 | 465 | 244 | 22 | 12 | 463 | 17 | 400 | 1.10e-30 | 123 |
| MS.gene83835.t1 | MTR_8g079980 | 26.879 | 439 | 269 | 17 | 6 | 432 | 6 | 404 | 1.51e-30 | 123 |
| MS.gene83835.t1 | MTR_3g071320 | 27.520 | 367 | 249 | 9 | 3 | 361 | 4 | 361 | 2.22e-30 | 122 |
| MS.gene83835.t1 | MTR_3g101930 | 28.796 | 382 | 220 | 16 | 62 | 423 | 73 | 422 | 2.52e-30 | 122 |
| MS.gene83835.t1 | MTR_3g112180 | 28.378 | 444 | 257 | 17 | 12 | 437 | 20 | 420 | 5.37e-30 | 122 |
| MS.gene83835.t1 | MTR_7g114550 | 25.361 | 485 | 291 | 22 | 1 | 461 | 7 | 444 | 6.09e-30 | 121 |
| MS.gene83835.t1 | MTR_7g114520 | 25.000 | 464 | 290 | 20 | 11 | 456 | 18 | 441 | 9.55e-30 | 121 |
| MS.gene83835.t1 | MTR_1g040320 | 25.558 | 403 | 223 | 12 | 11 | 405 | 16 | 349 | 2.71e-29 | 119 |
| MS.gene83835.t1 | MTR_3g465990 | 26.218 | 431 | 268 | 17 | 4 | 415 | 10 | 409 | 6.04e-29 | 119 |
| MS.gene83835.t1 | MTR_4g055170 | 26.540 | 422 | 255 | 16 | 11 | 411 | 19 | 406 | 9.63e-29 | 118 |
| MS.gene83835.t1 | MTR_3g465980 | 26.959 | 434 | 261 | 18 | 4 | 415 | 10 | 409 | 1.81e-28 | 117 |
| MS.gene83835.t1 | MTR_2g015430 | 29.117 | 419 | 251 | 16 | 57 | 462 | 56 | 441 | 2.50e-28 | 117 |
| MS.gene83835.t1 | MTR_3g101900 | 28.133 | 391 | 221 | 18 | 62 | 430 | 69 | 421 | 8.67e-28 | 115 |
| MS.gene83835.t1 | MTR_3g070170 | 27.193 | 456 | 249 | 19 | 12 | 423 | 20 | 436 | 1.18e-27 | 115 |
| MS.gene83835.t1 | MTR_7g014200 | 24.180 | 488 | 308 | 17 | 3 | 455 | 8 | 468 | 1.56e-27 | 115 |
| MS.gene83835.t1 | MTR_7g114560 | 24.625 | 467 | 297 | 18 | 11 | 461 | 17 | 444 | 1.85e-27 | 114 |
| MS.gene83835.t1 | MTR_7g014160 | 25.859 | 495 | 296 | 22 | 3 | 455 | 8 | 473 | 2.58e-27 | 114 |
| MS.gene83835.t1 | MTR_2g007880 | 23.061 | 477 | 314 | 14 | 1 | 463 | 14 | 451 | 7.31e-27 | 112 |
| MS.gene83835.t1 | MTR_6g053810 | 27.937 | 383 | 235 | 16 | 3 | 364 | 8 | 370 | 7.59e-27 | 112 |
| MS.gene83835.t1 | MTR_3g465930 | 28.871 | 381 | 233 | 16 | 2 | 362 | 8 | 370 | 1.38e-26 | 112 |
| MS.gene83835.t1 | MTR_7g014250 | 24.948 | 481 | 304 | 15 | 5 | 455 | 3 | 456 | 2.65e-26 | 111 |
| MS.gene83835.t1 | MTR_7g014330 | 26.216 | 473 | 293 | 15 | 9 | 455 | 14 | 456 | 1.02e-25 | 109 |
| MS.gene83835.t1 | MTR_3g450710 | 26.133 | 375 | 219 | 15 | 59 | 405 | 65 | 409 | 1.03e-25 | 109 |
| MS.gene83835.t1 | MTR_1g094790 | 24.941 | 421 | 269 | 12 | 2 | 406 | 1 | 390 | 1.86e-25 | 108 |
| MS.gene83835.t1 | MTR_5g026320 | 26.207 | 435 | 290 | 15 | 19 | 448 | 35 | 443 | 3.03e-25 | 108 |
| MS.gene83835.t1 | MTR_3g450690 | 26.075 | 372 | 220 | 15 | 59 | 405 | 72 | 413 | 6.55e-25 | 107 |
| MS.gene83835.t1 | MTR_0190s0020 | 27.451 | 408 | 240 | 16 | 59 | 448 | 63 | 432 | 8.89e-25 | 106 |
| MS.gene83835.t1 | MTR_7g014610 | 25.820 | 488 | 308 | 21 | 3 | 455 | 7 | 475 | 5.11e-24 | 104 |
| MS.gene83835.t1 | MTR_3g102020 | 26.768 | 396 | 237 | 20 | 62 | 439 | 72 | 432 | 9.17e-24 | 103 |
| MS.gene83835.t1 | MTR_3g101960 | 27.654 | 405 | 240 | 20 | 62 | 448 | 71 | 440 | 9.71e-24 | 103 |
| MS.gene83835.t1 | MTR_3g465950 | 28.440 | 327 | 203 | 11 | 2 | 312 | 8 | 319 | 9.85e-24 | 103 |
| MS.gene83835.t1 | MTR_3g465910 | 28.947 | 380 | 231 | 19 | 2 | 362 | 8 | 367 | 1.25e-23 | 103 |
| MS.gene83835.t1 | MTR_6g045553 | 25.000 | 464 | 264 | 17 | 2 | 419 | 12 | 437 | 1.57e-23 | 103 |
| MS.gene83835.t1 | MTR_5g084870 | 22.462 | 463 | 301 | 15 | 2 | 451 | 1 | 418 | 1.64e-23 | 102 |
| MS.gene83835.t1 | MTR_8g079970 | 23.841 | 453 | 293 | 17 | 2 | 441 | 1 | 414 | 1.73e-23 | 102 |
| MS.gene83835.t1 | MTR_7g014230 | 25.253 | 495 | 299 | 15 | 1 | 458 | 1 | 461 | 2.22e-23 | 102 |
| MS.gene83835.t1 | MTR_4g094842 | 26.464 | 461 | 278 | 19 | 9 | 447 | 16 | 437 | 1.19e-22 | 100 |
| MS.gene83835.t1 | MTR_2g045550 | 37.500 | 144 | 80 | 2 | 1 | 144 | 1 | 134 | 1.20e-22 | 94.0 |
| MS.gene83835.t1 | MTR_7g110610 | 25.714 | 455 | 242 | 21 | 11 | 452 | 12 | 383 | 1.56e-22 | 99.4 |
| MS.gene83835.t1 | MTR_3g465880 | 26.424 | 439 | 268 | 17 | 2 | 415 | 8 | 416 | 1.59e-22 | 100 |
| MS.gene83835.t1 | MTR_8g041770 | 27.208 | 419 | 247 | 17 | 48 | 447 | 51 | 430 | 1.72e-22 | 100 |
| MS.gene83835.t1 | MTR_3g101970 | 26.562 | 448 | 255 | 20 | 19 | 439 | 18 | 418 | 3.36e-22 | 99.0 |
| MS.gene83835.t1 | MTR_3g102010 | 26.230 | 427 | 258 | 19 | 35 | 439 | 41 | 432 | 4.28e-22 | 99.0 |
| MS.gene83835.t1 | MTR_8g467580 | 25.532 | 423 | 257 | 15 | 4 | 406 | 1 | 385 | 4.93e-22 | 98.6 |
| MS.gene83835.t1 | MTR_8g467590 | 24.565 | 460 | 282 | 18 | 11 | 448 | 10 | 426 | 5.51e-22 | 98.6 |
| MS.gene83835.t1 | MTR_6g015830 | 24.390 | 492 | 282 | 20 | 10 | 458 | 19 | 463 | 8.69e-22 | 98.2 |
| MS.gene83835.t1 | MTR_5g081960 | 23.457 | 486 | 265 | 16 | 12 | 430 | 14 | 459 | 2.15e-21 | 97.1 |
| MS.gene83835.t1 | MTR_7g013850 | 23.980 | 392 | 227 | 14 | 59 | 406 | 68 | 432 | 7.00e-21 | 95.5 |
| MS.gene83835.t1 | MTR_7g014620 | 26.419 | 458 | 286 | 20 | 17 | 455 | 7 | 432 | 1.72e-20 | 94.0 |
| MS.gene83835.t1 | MTR_3g088420 | 27.348 | 362 | 223 | 17 | 62 | 412 | 58 | 390 | 4.71e-20 | 92.4 |
| MS.gene83835.t1 | MTR_3g465870 | 27.907 | 301 | 194 | 9 | 2 | 291 | 10 | 298 | 4.95e-20 | 92.4 |
| MS.gene83835.t1 | MTR_0502s0010 | 29.389 | 262 | 145 | 12 | 97 | 343 | 2 | 238 | 7.84e-20 | 89.0 |
| MS.gene83835.t1 | MTR_6g015850 | 24.364 | 472 | 282 | 20 | 21 | 458 | 30 | 460 | 1.18e-19 | 91.7 |
| MS.gene83835.t1 | MTR_6g015815 | 24.576 | 472 | 284 | 20 | 21 | 458 | 30 | 463 | 2.69e-19 | 90.5 |
| MS.gene83835.t1 | MTR_5g084850 | 23.077 | 468 | 311 | 16 | 2 | 463 | 1 | 425 | 3.55e-19 | 90.1 |
| MS.gene83835.t1 | MTR_8g079710 | 26.161 | 409 | 233 | 15 | 59 | 439 | 59 | 426 | 4.87e-19 | 89.7 |
| MS.gene83835.t1 | MTR_4g015180 | 26.383 | 470 | 272 | 22 | 12 | 430 | 14 | 460 | 1.63e-18 | 88.2 |
| MS.gene83835.t1 | MTR_7g026860 | 26.503 | 366 | 214 | 16 | 62 | 406 | 58 | 389 | 4.63e-18 | 86.7 |
| MS.gene83835.t1 | MTR_4g094835 | 25.485 | 412 | 248 | 20 | 57 | 447 | 62 | 435 | 6.76e-18 | 86.3 |
| MS.gene83835.t1 | MTR_1g035890 | 26.282 | 312 | 194 | 11 | 9 | 307 | 14 | 302 | 2.25e-17 | 84.3 |
| MS.gene83835.t1 | MTR_3g028210 | 26.512 | 430 | 263 | 18 | 6 | 406 | 11 | 416 | 6.35e-17 | 83.2 |
| MS.gene83835.t1 | MTR_7g015860 | 23.409 | 487 | 301 | 23 | 3 | 451 | 4 | 456 | 7.59e-17 | 83.2 |
| MS.gene83835.t1 | MTR_3g026310 | 24.760 | 416 | 253 | 17 | 59 | 447 | 55 | 437 | 7.97e-17 | 82.8 |
| MS.gene83835.t1 | MTR_4g022670 | 25.123 | 406 | 243 | 19 | 40 | 415 | 32 | 406 | 8.37e-17 | 82.8 |
| MS.gene83835.t1 | MTR_6g015315 | 20.714 | 420 | 280 | 13 | 62 | 458 | 66 | 455 | 9.89e-17 | 82.8 |
| MS.gene83835.t1 | MTR_4g022290 | 23.832 | 428 | 255 | 16 | 59 | 459 | 60 | 443 | 1.14e-16 | 82.4 |
| MS.gene83835.t1 | MTR_4g022720 | 25.610 | 410 | 238 | 18 | 62 | 447 | 58 | 424 | 3.16e-16 | 80.9 |
| MS.gene83835.t1 | MTR_4g007460 | 34.965 | 143 | 78 | 5 | 74 | 214 | 2 | 131 | 4.17e-16 | 75.9 |
| MS.gene83835.t1 | MTR_6g015320 | 20.625 | 480 | 326 | 16 | 4 | 458 | 8 | 457 | 6.21e-16 | 80.1 |
| MS.gene83835.t1 | MTR_4g022760 | 27.303 | 304 | 196 | 13 | 62 | 352 | 58 | 349 | 1.43e-15 | 78.6 |
| MS.gene83835.t1 | MTR_4g022800 | 25.131 | 382 | 215 | 16 | 62 | 412 | 58 | 399 | 3.33e-15 | 77.8 |
| MS.gene83835.t1 | MTR_3g087640 | 21.837 | 490 | 320 | 17 | 6 | 458 | 12 | 475 | 1.03e-14 | 76.6 |
| MS.gene83835.t1 | MTR_4g094838 | 24.356 | 427 | 236 | 17 | 49 | 447 | 54 | 421 | 1.21e-14 | 76.3 |
| MS.gene83835.t1 | MTR_3g100150 | 25.633 | 316 | 198 | 10 | 5 | 307 | 12 | 303 | 1.41e-14 | 76.3 |
| MS.gene83835.t1 | MTR_2g045540 | 39.048 | 105 | 50 | 4 | 209 | 312 | 2 | 93 | 1.01e-13 | 67.8 |
| MS.gene83835.t1 | MTR_0042s0190 | 25.333 | 300 | 181 | 15 | 161 | 449 | 3 | 270 | 1.66e-13 | 71.2 |
| MS.gene83835.t1 | MTR_2g036780 | 25.475 | 263 | 168 | 7 | 24 | 279 | 34 | 275 | 3.38e-13 | 71.6 |
| MS.gene83835.t1 | MTR_7g014630 | 27.895 | 190 | 110 | 6 | 3 | 175 | 8 | 187 | 9.72e-13 | 69.7 |
| MS.gene83835.t1 | MTR_7g014360 | 23.153 | 406 | 252 | 11 | 69 | 455 | 22 | 386 | 9.76e-13 | 70.1 |
| MS.gene83835.t1 | MTR_2g089670 | 24.872 | 390 | 246 | 16 | 40 | 406 | 64 | 429 | 1.38e-12 | 70.1 |
| MS.gene83835.t1 | MTR_7g114960 | 23.242 | 327 | 192 | 11 | 59 | 362 | 63 | 353 | 9.13e-12 | 67.4 |
| MS.gene83835.t1 | MTR_0042s0230 | 32.593 | 135 | 84 | 3 | 11 | 141 | 16 | 147 | 2.27e-11 | 62.4 |
| MS.gene83835.t1 | MTR_0042s0190 | 27.551 | 196 | 117 | 8 | 261 | 449 | 28 | 205 | 2.70e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83835.t1 | AT2G19070 | 37.013 | 462 | 273 | 11 | 1 | 455 | 1 | 451 | 7.56e-101 | 309 |
| MS.gene83835.t1 | AT5G48930 | 32.747 | 455 | 280 | 13 | 2 | 453 | 1 | 432 | 3.84e-74 | 239 |
| MS.gene83835.t1 | AT5G57840 | 31.330 | 466 | 288 | 14 | 2 | 459 | 1 | 442 | 3.60e-63 | 211 |
| MS.gene83835.t1 | AT5G41040 | 31.084 | 415 | 243 | 15 | 2 | 406 | 13 | 394 | 7.76e-56 | 192 |
| MS.gene83835.t1 | AT5G41040 | 31.084 | 415 | 243 | 15 | 2 | 406 | 29 | 410 | 1.33e-55 | 192 |
| MS.gene83835.t1 | AT3G48720 | 32.108 | 408 | 226 | 19 | 11 | 406 | 16 | 384 | 5.53e-48 | 171 |
| MS.gene83835.t1 | AT5G63560 | 31.281 | 406 | 228 | 15 | 11 | 406 | 16 | 380 | 6.59e-47 | 167 |
| MS.gene83835.t1 | AT1G65450 | 26.496 | 468 | 296 | 14 | 2 | 455 | 16 | 449 | 1.98e-39 | 148 |
| MS.gene83835.t1 | AT3G26040 | 27.669 | 459 | 288 | 16 | 11 | 463 | 10 | 430 | 2.01e-36 | 139 |
| MS.gene83835.t1 | AT3G03480 | 25.690 | 471 | 290 | 19 | 2 | 453 | 15 | 444 | 2.51e-35 | 137 |
| MS.gene83835.t1 | AT1G24430 | 28.736 | 435 | 268 | 15 | 2 | 432 | 3 | 399 | 5.37e-35 | 135 |
| MS.gene83835.t1 | AT5G17540 | 25.527 | 474 | 293 | 23 | 3 | 458 | 8 | 439 | 6.09e-35 | 135 |
| MS.gene83835.t1 | AT2G40230 | 28.810 | 420 | 244 | 15 | 4 | 406 | 5 | 386 | 4.29e-34 | 133 |
| MS.gene83835.t1 | AT1G27620 | 28.508 | 449 | 273 | 17 | 11 | 452 | 16 | 423 | 1.02e-33 | 132 |
| MS.gene83835.t1 | AT1G03390 | 26.907 | 472 | 292 | 18 | 2 | 451 | 15 | 455 | 9.25e-33 | 129 |
| MS.gene83835.t1 | AT3G29635 | 25.536 | 466 | 284 | 17 | 22 | 458 | 26 | 457 | 1.09e-32 | 129 |
| MS.gene83835.t1 | AT1G78990 | 28.056 | 360 | 216 | 14 | 59 | 406 | 67 | 395 | 1.44e-32 | 129 |
| MS.gene83835.t1 | AT5G07080 | 28.155 | 412 | 260 | 17 | 11 | 411 | 21 | 407 | 1.24e-31 | 126 |
| MS.gene83835.t1 | AT1G32910 | 26.923 | 364 | 234 | 13 | 52 | 406 | 58 | 398 | 1.83e-31 | 126 |
| MS.gene83835.t1 | AT3G30280 | 26.974 | 456 | 275 | 15 | 11 | 449 | 13 | 427 | 8.84e-31 | 124 |
| MS.gene83835.t1 | AT3G62160 | 25.537 | 419 | 241 | 17 | 11 | 411 | 12 | 377 | 1.28e-30 | 123 |
| MS.gene83835.t1 | AT2G25150 | 27.546 | 432 | 275 | 15 | 11 | 431 | 20 | 424 | 8.15e-30 | 121 |
| MS.gene83835.t1 | AT1G28680 | 25.995 | 427 | 264 | 15 | 1 | 411 | 1 | 391 | 1.50e-29 | 120 |
| MS.gene83835.t1 | AT3G29670 | 24.938 | 405 | 261 | 15 | 62 | 451 | 69 | 445 | 1.50e-28 | 117 |
| MS.gene83835.t1 | AT4G15390 | 26.226 | 469 | 279 | 17 | 11 | 459 | 15 | 436 | 2.42e-28 | 117 |
| MS.gene83835.t1 | AT4G15390 | 26.226 | 469 | 279 | 17 | 11 | 459 | 15 | 436 | 2.42e-28 | 117 |
| MS.gene83835.t1 | AT1G28680 | 26.667 | 375 | 231 | 15 | 1 | 356 | 1 | 350 | 6.95e-27 | 112 |
| MS.gene83835.t1 | AT4G31910 | 24.747 | 396 | 253 | 12 | 38 | 411 | 44 | 416 | 7.96e-26 | 110 |
| MS.gene83835.t1 | AT3G47170 | 27.297 | 381 | 248 | 13 | 11 | 371 | 19 | 390 | 8.85e-26 | 110 |
| MS.gene83835.t1 | AT5G47950 | 26.364 | 440 | 261 | 17 | 11 | 439 | 13 | 400 | 1.05e-25 | 109 |
| MS.gene83835.t1 | AT2G23510 | 26.521 | 411 | 264 | 15 | 11 | 411 | 20 | 402 | 1.44e-25 | 108 |
| MS.gene83835.t1 | AT3G29590 | 26.859 | 417 | 244 | 16 | 66 | 456 | 68 | 449 | 1.97e-25 | 108 |
| MS.gene83835.t1 | AT1G24420 | 24.947 | 473 | 297 | 15 | 3 | 463 | 4 | 430 | 6.75e-25 | 107 |
| MS.gene83835.t1 | AT1G24420 | 24.947 | 473 | 297 | 15 | 3 | 463 | 4 | 430 | 6.75e-25 | 107 |
| MS.gene83835.t1 | AT5G16410 | 23.626 | 364 | 230 | 13 | 57 | 406 | 89 | 418 | 1.76e-24 | 106 |
| MS.gene83835.t1 | AT5G23970 | 24.215 | 446 | 286 | 18 | 2 | 439 | 1 | 402 | 2.36e-24 | 105 |
| MS.gene83835.t1 | AT5G23940 | 26.437 | 435 | 271 | 18 | 35 | 449 | 38 | 443 | 8.25e-24 | 104 |
| MS.gene83835.t1 | AT1G31490 | 24.939 | 413 | 271 | 14 | 1 | 406 | 3 | 383 | 3.56e-23 | 102 |
| MS.gene83835.t1 | AT5G39080 | 25.506 | 494 | 290 | 22 | 4 | 457 | 8 | 463 | 5.82e-23 | 101 |
| MS.gene83835.t1 | AT5G07870 | 27.644 | 416 | 264 | 17 | 59 | 461 | 72 | 463 | 1.47e-22 | 100 |
| MS.gene83835.t1 | AT3G50280 | 26.893 | 383 | 216 | 20 | 59 | 416 | 59 | 402 | 1.57e-22 | 100 |
| MS.gene83835.t1 | AT1G65450 | 24.762 | 315 | 197 | 9 | 151 | 455 | 1 | 285 | 1.81e-22 | 97.4 |
| MS.gene83835.t1 | AT5G07860 | 27.792 | 403 | 243 | 18 | 59 | 448 | 72 | 439 | 2.63e-22 | 99.8 |
| MS.gene83835.t1 | AT3G29680 | 24.268 | 478 | 304 | 17 | 4 | 457 | 6 | 449 | 2.73e-22 | 99.4 |
| MS.gene83835.t1 | AT3G50270 | 27.208 | 419 | 241 | 23 | 21 | 416 | 30 | 407 | 3.14e-22 | 99.4 |
| MS.gene83835.t1 | AT5G67150 | 27.506 | 429 | 248 | 24 | 42 | 447 | 47 | 435 | 5.49e-21 | 95.5 |
| MS.gene83835.t1 | AT5G39090 | 25.367 | 477 | 294 | 21 | 6 | 456 | 8 | 448 | 9.83e-21 | 94.7 |
| MS.gene83835.t1 | AT5G07850 | 24.105 | 419 | 269 | 18 | 59 | 461 | 70 | 455 | 1.80e-20 | 94.0 |
| MS.gene83835.t1 | AT5G47980 | 23.191 | 470 | 318 | 16 | 2 | 463 | 3 | 437 | 2.55e-20 | 93.6 |
| MS.gene83835.t1 | AT5G42830 | 25.307 | 407 | 256 | 19 | 59 | 448 | 64 | 439 | 2.95e-20 | 93.6 |
| MS.gene83835.t1 | AT4G15400 | 24.947 | 473 | 298 | 20 | 2 | 463 | 3 | 429 | 1.91e-19 | 90.9 |
| MS.gene83835.t1 | AT1G03940 | 23.482 | 494 | 304 | 20 | 6 | 460 | 11 | 469 | 2.92e-18 | 87.4 |
| MS.gene83835.t1 | AT3G50300 | 25.635 | 433 | 241 | 22 | 59 | 458 | 59 | 443 | 3.68e-17 | 84.0 |
| MS.gene83835.t1 | AT5G39050 | 24.051 | 474 | 308 | 16 | 12 | 456 | 18 | 468 | 2.56e-16 | 81.6 |
| MS.gene83835.t1 | AT3G50280 | 25.260 | 289 | 180 | 13 | 135 | 416 | 13 | 272 | 6.15e-16 | 79.0 |
| MS.gene83835.t1 | AT1G03495 | 24.927 | 341 | 214 | 13 | 6 | 317 | 11 | 338 | 3.11e-15 | 77.4 |
| MS.gene83835.t1 | AT3G50290 | 25.214 | 234 | 152 | 9 | 135 | 361 | 19 | 236 | 2.18e-12 | 67.8 |
Find 90 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTGCCTAAGAATTATTT+TGG | 0.081602 | 7.4:+21569350 | MS.gene83835:CDS |
| CCGTTTAATGAGACCGATTT+TGG | 0.124040 | 7.4:+21569626 | MS.gene83835:CDS |
| CTGGGTCGTTCTGTTCTTGA+TGG | 0.283808 | 7.4:+21568906 | MS.gene83835:CDS |
| GATATTGCTTTAAAAGATTT+AGG | 0.292155 | 7.4:+21568750 | MS.gene83835:CDS |
| AAGTGCGCTTTGAAGGAAAT+TGG | 0.321861 | 7.4:+21569273 | MS.gene83835:CDS |
| CTATGTATGAACGGTGGATT+TGG | 0.326559 | 7.4:-21568455 | None:intergenic |
| CCTTGTGGGTCACTCACTCT+TGG | 0.327948 | 7.4:+21568876 | MS.gene83835:CDS |
| TTCCCAACCACATAACAAAA+AGG | 0.329036 | 7.4:-21569431 | None:intergenic |
| ACTCACTCTTGGTCTTGCTC+TGG | 0.329835 | 7.4:+21568887 | MS.gene83835:CDS |
| TGTTGCAATGAAGTTGTAAA+TGG | 0.331490 | 7.4:-21568695 | None:intergenic |
| TAAAGTTGGTATCCATGGTT+AGG | 0.353132 | 7.4:-21568543 | None:intergenic |
| CAACCAACAACATACAAATT+CGG | 0.366121 | 7.4:-21569593 | None:intergenic |
| AGAAGGATATGAATTTGTTA+AGG | 0.368085 | 7.4:+21569522 | MS.gene83835:CDS |
| GCATTCCCAAAATAATTCTT+AGG | 0.370343 | 7.4:-21569356 | None:intergenic |
| AGGTTATTAGTTGTTACATA+TGG | 0.371511 | 7.4:+21569237 | MS.gene83835:CDS |
| AACAAAGGAACATCTTCAAC+TGG | 0.377562 | 7.4:-21568831 | None:intergenic |
| ACCAAGGTTGTTAACCTTGT+TGG | 0.383376 | 7.4:-21569302 | None:intergenic |
| GCTAAAAGAAATGGACAATT+CGG | 0.390063 | 7.4:+21569563 | MS.gene83835:CDS |
| AGTTGAAGATGTTCCTTTGT+TGG | 0.391503 | 7.4:+21568833 | MS.gene83835:CDS |
| AGTGAGGGAAGCTATTAAAA+AGG | 0.397885 | 7.4:+21569454 | MS.gene83835:CDS |
| TATATTCTTGATGAAGCTAA+TGG | 0.402079 | 7.4:+21569710 | MS.gene83835:CDS |
| CCTGGTATTGTTAATTCTGA+TGG | 0.403024 | 7.4:+21569674 | MS.gene83835:CDS |
| CTGGTAGTTTCATTAGCTCA+TGG | 0.408004 | 7.4:+21568937 | MS.gene83835:CDS |
| AACAAAGTTCTATCATGAAA+TGG | 0.413409 | 7.4:-21569002 | None:intergenic |
| CCTTGGTTAATTGTAGAAAC+AGG | 0.414948 | 7.4:+21569318 | MS.gene83835:CDS |
| TTGACACTATCATCACAGTT+TGG | 0.415059 | 7.4:-21569825 | None:intergenic |
| GAAGGATATGAATTTGTTAA+GGG | 0.417826 | 7.4:+21569523 | MS.gene83835:CDS |
| GTTCTTGATGGTTCTTCTGC+TGG | 0.417833 | 7.4:+21568918 | MS.gene83835:CDS |
| AAACCTGATTGTATGGTTCC+TGG | 0.419876 | 7.4:+21569656 | MS.gene83835:CDS |
| GTTTGTAAAGTGCGCTTTGA+AGG | 0.420692 | 7.4:+21569266 | MS.gene83835:CDS |
| ATCATGAAATGGAATCATAC+TGG | 0.425406 | 7.4:-21568991 | None:intergenic |
| ATAGTAGTGAGTGAGTGTTT+TGG | 0.427197 | 7.4:-21568634 | None:intergenic |
| ACTCACTACTATCCCTTTGC+AGG | 0.430831 | 7.4:+21568645 | MS.gene83835:CDS |
| CCAAAATCGGTCTCATTAAA+CGG | 0.433375 | 7.4:-21569626 | None:intergenic |
| AGTTTACCAAGTTTCCTTGT+GGG | 0.443352 | 7.4:+21568862 | MS.gene83835:CDS |
| CTCACTCTTGGTCTTGCTCT+GGG | 0.445044 | 7.4:+21568888 | MS.gene83835:CDS |
| ATTGTTAATTCTGATGGTAT+TGG | 0.447032 | 7.4:+21569680 | MS.gene83835:CDS |
| GACCCGAATTTGTATGTTGT+TGG | 0.459492 | 7.4:+21569590 | MS.gene83835:CDS |
| TGTTTGTGAAGAGGTAAAGT+TGG | 0.465289 | 7.4:-21568557 | None:intergenic |
| AAGAGATGAGTGATGATGAA+TGG | 0.471240 | 7.4:-21568584 | None:intergenic |
| AACCAACAACATACAAATTC+GGG | 0.478369 | 7.4:-21569592 | None:intergenic |
| TAATTCTGATGGTATTGGTA+AGG | 0.485819 | 7.4:+21569685 | MS.gene83835:CDS |
| CCAAAATAATTCTTAGGCAA+AGG | 0.492931 | 7.4:-21569350 | None:intergenic |
| CGAATTTGTATGTTGTTGGT+TGG | 0.496564 | 7.4:+21569594 | MS.gene83835:CDS |
| GGTGAATTTCAACATGGTAG+TGG | 0.502907 | 7.4:-21569141 | None:intergenic |
| CAGTTTACCAAGTTTCCTTG+TGG | 0.509783 | 7.4:+21568861 | MS.gene83835:CDS |
| CCTTTGCAGGTAGATTAAGC+TGG | 0.522403 | 7.4:+21568658 | MS.gene83835:CDS |
| ACCAACAAGGTTAACAACCT+TGG | 0.525311 | 7.4:+21569301 | MS.gene83835:CDS |
| TGGTAGTTTCATTAGCTCAT+GGG | 0.526316 | 7.4:+21568938 | MS.gene83835:CDS |
| CCAGCTTAATCTACCTGCAA+AGG | 0.526320 | 7.4:-21568658 | None:intergenic |
| GTGGTTGGTGTTGTCTCTGA+AGG | 0.528212 | 7.4:-21568483 | None:intergenic |
| CCATCAGAATTAACAATACC+AGG | 0.531351 | 7.4:-21569674 | None:intergenic |
| GAGTGACCCACAAGGAAACT+TGG | 0.531384 | 7.4:-21568868 | None:intergenic |
| AGAGGTAAAGTTGGTATCCA+TGG | 0.536783 | 7.4:-21568548 | None:intergenic |
| CAGCTTAATCTACCTGCAAA+GGG | 0.537755 | 7.4:-21568657 | None:intergenic |
| TCATGGGCTAAACTTGCTAA+AGG | 0.538185 | 7.4:+21568954 | MS.gene83835:CDS |
| AGAGATGAGTGATGATGAAT+GGG | 0.545184 | 7.4:-21568583 | None:intergenic |
| ATACCAGGAACCATACAATC+AGG | 0.550344 | 7.4:-21569659 | None:intergenic |
| AAATAATTCTTAGGCAAAGG+TGG | 0.552771 | 7.4:-21569347 | None:intergenic |
| CTTGATGAAGCTAATGGTGA+TGG | 0.559185 | 7.4:+21569716 | MS.gene83835:CDS |
| TTATTAGTTGTTACATATGG+AGG | 0.560321 | 7.4:+21569240 | MS.gene83835:CDS |
| AGGTTGTTAACCTTGTTGGT+TGG | 0.562457 | 7.4:-21569298 | None:intergenic |
| CAACTTCATTGCAACAACAA+AGG | 0.563353 | 7.4:+21568702 | MS.gene83835:CDS |
| AAAGTTGGTATCCATGGTTA+GGG | 0.563700 | 7.4:-21568542 | None:intergenic |
| AACATGGTAGTGGCAAAGAG+TGG | 0.563812 | 7.4:-21569131 | None:intergenic |
| GGTAGATTAAGCTGGATCAA+AGG | 0.579924 | 7.4:+21568666 | MS.gene83835:CDS |
| GAGCTTGAGTTGATCACAGA+GGG | 0.580856 | 7.4:-21568520 | None:intergenic |
| GAAAGAGAGAGTGTGGTGGT+TGG | 0.587131 | 7.4:-21568498 | None:intergenic |
| ACATGGTAGTGGCAAAGAGT+GGG | 0.588001 | 7.4:-21569130 | None:intergenic |
| ACAGAGGGAAAGAGAGAGTG+TGG | 0.591568 | 7.4:-21568505 | None:intergenic |
| TGATTATGTAGCAAATCAGA+AGG | 0.592162 | 7.4:+21569505 | MS.gene83835:CDS |
| GTTATGTGGTTGGGAAAGTG+AGG | 0.594320 | 7.4:+21569438 | MS.gene83835:CDS |
| CAACTCAAGCTCCCTAACCA+TGG | 0.599984 | 7.4:+21568531 | MS.gene83835:CDS |
| CCTGTTTCTACAATTAACCA+AGG | 0.607399 | 7.4:-21569318 | None:intergenic |
| GAAAACGTGGTGGTAAATGA+AGG | 0.612694 | 7.4:-21569037 | None:intergenic |
| GAACAAGTTTGTGTCACCGT+AGG | 0.630705 | 7.4:-21569386 | None:intergenic |
| GTAAACTGAACAACCAACAA+AGG | 0.642328 | 7.4:-21568846 | None:intergenic |
| AGCCAACACCAATGAAAACA+AGG | 0.649428 | 7.4:+21569193 | MS.gene83835:CDS |
| GAAATTGGAACCAACCAACA+AGG | 0.652154 | 7.4:+21569288 | MS.gene83835:CDS |
| AAAAGAAATGGACAATTCGG+TGG | 0.653578 | 7.4:+21569566 | MS.gene83835:CDS |
| ACAAAGGAACATCTTCAACT+GGG | 0.664068 | 7.4:-21568830 | None:intergenic |
| TTATGTGGTTGGGAAAGTGA+GGG | 0.670881 | 7.4:+21569439 | MS.gene83835:CDS |
| CCAAGAGTGAGTGACCCACA+AGG | 0.679354 | 7.4:-21568876 | None:intergenic |
| AAGGTGTAACTATGTATGAA+CGG | 0.693375 | 7.4:-21568464 | None:intergenic |
| ACCAATGAAAACAAGGTACG+AGG | 0.701204 | 7.4:+21569200 | MS.gene83835:CDS |
| GAGGGAAAGAGAGAGTGTGG+TGG | 0.702222 | 7.4:-21568502 | None:intergenic |
| AACTCATGATGATGAAAACG+TGG | 0.716513 | 7.4:-21569050 | None:intergenic |
| GTGTAACTATGTATGAACGG+TGG | 0.717757 | 7.4:-21568461 | None:intergenic |
| TCATGATGATGAAAACGTGG+TGG | 0.758242 | 7.4:-21569047 | None:intergenic |
| GGAGCTTGAGTTGATCACAG+AGG | 0.762986 | 7.4:-21568521 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATTTTGCTAAAAGAAA+TGG | + | chr7.4:21569554-21569573 | MS.gene83835:CDS | 15.0% |
| !!! | AAGTTTTTCAACTTGTTTTT+TGG | - | chr7.4:21569165-21569184 | None:intergenic | 20.0% |
| !!! | GATATTGCTTTAAAAGATTT+AGG | + | chr7.4:21568750-21568769 | MS.gene83835:CDS | 20.0% |
| !!! | TAATTTTTGGAACAAGTTTT+TGG | - | chr7.4:21568800-21568819 | None:intergenic | 20.0% |
| ! | AACAAAGTTCTATCATGAAA+TGG | - | chr7.4:21569005-21569024 | None:intergenic | 25.0% |
| ! | AGGTTATTAGTTGTTACATA+TGG | + | chr7.4:21569237-21569256 | MS.gene83835:CDS | 25.0% |
| ! | ATTGTTAATTCTGATGGTAT+TGG | + | chr7.4:21569680-21569699 | MS.gene83835:CDS | 25.0% |
| ! | TATATTCTTGATGAAGCTAA+TGG | + | chr7.4:21569710-21569729 | MS.gene83835:CDS | 25.0% |
| ! | TTATTAGTTGTTACATATGG+AGG | + | chr7.4:21569240-21569259 | MS.gene83835:CDS | 25.0% |
| !! | ATTACTACTATTTTCCCAAA+GGG | - | chr7.4:21569087-21569106 | None:intergenic | 25.0% |
| !! | CTTTGCCTAAGAATTATTTT+GGG | + | chr7.4:21569351-21569370 | MS.gene83835:CDS | 25.0% |
| !! | TATTACTACTATTTTCCCAA+AGG | - | chr7.4:21569088-21569107 | None:intergenic | 25.0% |
| !!! | AGAAGGATATGAATTTGTTA+AGG | + | chr7.4:21569522-21569541 | MS.gene83835:CDS | 25.0% |
| !!! | GAAGGATATGAATTTGTTAA+GGG | + | chr7.4:21569523-21569542 | MS.gene83835:CDS | 25.0% |
| !!! | TTTTTTGGTGAATTTCAACA+TGG | - | chr7.4:21569150-21569169 | None:intergenic | 25.0% |
| AAATAATTCTTAGGCAAAGG+TGG | - | chr7.4:21569350-21569369 | None:intergenic | 30.0% | |
| AACCAACAACATACAAATTC+GGG | - | chr7.4:21569595-21569614 | None:intergenic | 30.0% | |
| AAGGTGTAACTATGTATGAA+CGG | - | chr7.4:21568467-21568486 | None:intergenic | 30.0% | |
| ATCATGAAATGGAATCATAC+TGG | - | chr7.4:21568994-21569013 | None:intergenic | 30.0% | |
| CAACCAACAACATACAAATT+CGG | - | chr7.4:21569596-21569615 | None:intergenic | 30.0% | |
| CCAAAATAATTCTTAGGCAA+AGG | - | chr7.4:21569353-21569372 | None:intergenic | 30.0% | |
| GCATTCCCAAAATAATTCTT+AGG | - | chr7.4:21569359-21569378 | None:intergenic | 30.0% | |
| GCTAAAAGAAATGGACAATT+CGG | + | chr7.4:21569563-21569582 | MS.gene83835:CDS | 30.0% | |
| TGATTATGTAGCAAATCAGA+AGG | + | chr7.4:21569505-21569524 | MS.gene83835:CDS | 30.0% | |
| TGTTGCAATGAAGTTGTAAA+TGG | - | chr7.4:21568698-21568717 | None:intergenic | 30.0% | |
| ! | CCTTTGCCTAAGAATTATTT+TGG | + | chr7.4:21569350-21569369 | MS.gene83835:CDS | 30.0% |
| ! | GGGACATCATAGTTAATTTT+TGG | - | chr7.4:21568813-21568832 | None:intergenic | 30.0% |
| ! | TTACTACTATTTTCCCAAAG+GGG | - | chr7.4:21569086-21569105 | None:intergenic | 30.0% |
| !! | GAAGTTGTTTTATGAGGATA+TGG | + | chr7.4:21569787-21569806 | MS.gene83835:CDS | 30.0% |
| !! | GTTGAAGAAGTTGTTTTATG+AGG | + | chr7.4:21569781-21569800 | MS.gene83835:CDS | 30.0% |
| !! | TAATTCTGATGGTATTGGTA+AGG | + | chr7.4:21569685-21569704 | MS.gene83835:CDS | 30.0% |
| !!! | TTTTAAAGCAATATCACACG+TGG | - | chr7.4:21568745-21568764 | None:intergenic | 30.0% |
| AAAAGAAATGGACAATTCGG+TGG | + | chr7.4:21569566-21569585 | MS.gene83835:CDS | 35.0% | |
| AACAAAGGAACATCTTCAAC+TGG | - | chr7.4:21568834-21568853 | None:intergenic | 35.0% | |
| ACAAAGGAACATCTTCAACT+GGG | - | chr7.4:21568833-21568852 | None:intergenic | 35.0% | |
| AGTGAGGGAAGCTATTAAAA+AGG | + | chr7.4:21569454-21569473 | MS.gene83835:CDS | 35.0% | |
| AGTTGAAGATGTTCCTTTGT+TGG | + | chr7.4:21568833-21568852 | MS.gene83835:CDS | 35.0% | |
| AGTTTACCAAGTTTCCTTGT+GGG | + | chr7.4:21568862-21568881 | MS.gene83835:CDS | 35.0% | |
| CAACTTCATTGCAACAACAA+AGG | + | chr7.4:21568702-21568721 | MS.gene83835:CDS | 35.0% | |
| CCAAAATCGGTCTCATTAAA+CGG | - | chr7.4:21569629-21569648 | None:intergenic | 35.0% | |
| CCATCAGAATTAACAATACC+AGG | - | chr7.4:21569677-21569696 | None:intergenic | 35.0% | |
| CCTGGTATTGTTAATTCTGA+TGG | + | chr7.4:21569674-21569693 | MS.gene83835:CDS | 35.0% | |
| CCTTGGTTAATTGTAGAAAC+AGG | + | chr7.4:21569318-21569337 | MS.gene83835:CDS | 35.0% | |
| CGAATTTGTATGTTGTTGGT+TGG | + | chr7.4:21569594-21569613 | MS.gene83835:CDS | 35.0% | |
| GTAAACTGAACAACCAACAA+AGG | - | chr7.4:21568849-21568868 | None:intergenic | 35.0% | |
| TGGTAGTTTCATTAGCTCAT+GGG | + | chr7.4:21568938-21568957 | MS.gene83835:CDS | 35.0% | |
| TGTTTGTGAAGAGGTAAAGT+TGG | - | chr7.4:21568560-21568579 | None:intergenic | 35.0% | |
| TTCCCAACCACATAACAAAA+AGG | - | chr7.4:21569434-21569453 | None:intergenic | 35.0% | |
| ! | AACTCATGATGATGAAAACG+TGG | - | chr7.4:21569053-21569072 | None:intergenic | 35.0% |
| ! | AAGAGATGAGTGATGATGAA+TGG | - | chr7.4:21568587-21568606 | None:intergenic | 35.0% |
| ! | AGAGATGAGTGATGATGAAT+GGG | - | chr7.4:21568586-21568605 | None:intergenic | 35.0% |
| ! | ATAGTAGTGAGTGAGTGTTT+TGG | - | chr7.4:21568637-21568656 | None:intergenic | 35.0% |
| !! | AAAGTTGGTATCCATGGTTA+GGG | - | chr7.4:21568545-21568564 | None:intergenic | 35.0% |
| !! | AAGCCTTTTTGTTATGTGGT+TGG | + | chr7.4:21569428-21569447 | MS.gene83835:CDS | 35.0% |
| !! | AGCCTTTTTGTTATGTGGTT+GGG | + | chr7.4:21569429-21569448 | MS.gene83835:CDS | 35.0% |
| !! | CCTGTTTCTACAATTAACCA+AGG | - | chr7.4:21569321-21569340 | None:intergenic | 35.0% |
| !! | CGTTTAATGAGACCGATTTT+GGG | + | chr7.4:21569627-21569646 | MS.gene83835:CDS | 35.0% |
| !! | GAACAAGCCTTTTTGTTATG+TGG | + | chr7.4:21569424-21569443 | MS.gene83835:CDS | 35.0% |
| !! | TAAAGTTGGTATCCATGGTT+AGG | - | chr7.4:21568546-21568565 | None:intergenic | 35.0% |
| !!! | AATGGGTTTTGTTTGTGAAG+AGG | - | chr7.4:21568569-21568588 | None:intergenic | 35.0% |
| !!! | ACGAGGTTATACTAGTTTTG+AGG | + | chr7.4:21569217-21569236 | MS.gene83835:CDS | 35.0% |
| !!! | TACCTTGTTTTCATTGGTGT+TGG | - | chr7.4:21569198-21569217 | None:intergenic | 35.0% |
| AAACCTGATTGTATGGTTCC+TGG | + | chr7.4:21569656-21569675 | MS.gene83835:CDS | 40.0% | |
| ACCAACAAGGTTAACAACCT+TGG | + | chr7.4:21569301-21569320 | MS.gene83835:CDS | 40.0% | |
| ACCAAGGTTGTTAACCTTGT+TGG | - | chr7.4:21569305-21569324 | None:intergenic | 40.0% | |
| ACCAATGAAAACAAGGTACG+AGG | + | chr7.4:21569200-21569219 | MS.gene83835:CDS | 40.0% | |
| AGCCAACACCAATGAAAACA+AGG | + | chr7.4:21569193-21569212 | MS.gene83835:CDS | 40.0% | |
| AGGTTGTTAACCTTGTTGGT+TGG | - | chr7.4:21569301-21569320 | None:intergenic | 40.0% | |
| ATACCAGGAACCATACAATC+AGG | - | chr7.4:21569662-21569681 | None:intergenic | 40.0% | |
| CAGCTTAATCTACCTGCAAA+GGG | - | chr7.4:21568660-21568679 | None:intergenic | 40.0% | |
| CAGTTTACCAAGTTTCCTTG+TGG | + | chr7.4:21568861-21568880 | MS.gene83835:CDS | 40.0% | |
| CTGGTAGTTTCATTAGCTCA+TGG | + | chr7.4:21568937-21568956 | MS.gene83835:CDS | 40.0% | |
| CTTGATGAAGCTAATGGTGA+TGG | + | chr7.4:21569716-21569735 | MS.gene83835:CDS | 40.0% | |
| GAAAACGTGGTGGTAAATGA+AGG | - | chr7.4:21569040-21569059 | None:intergenic | 40.0% | |
| GAAATTGGAACCAACCAACA+AGG | + | chr7.4:21569288-21569307 | MS.gene83835:CDS | 40.0% | |
| GACCCGAATTTGTATGTTGT+TGG | + | chr7.4:21569590-21569609 | MS.gene83835:CDS | 40.0% | |
| GGTAGATTAAGCTGGATCAA+AGG | + | chr7.4:21568666-21568685 | MS.gene83835:CDS | 40.0% | |
| GGTGAATTTCAACATGGTAG+TGG | - | chr7.4:21569144-21569163 | None:intergenic | 40.0% | |
| GTGTAACTATGTATGAACGG+TGG | - | chr7.4:21568464-21568483 | None:intergenic | 40.0% | |
| GTTTGTAAAGTGCGCTTTGA+AGG | + | chr7.4:21569266-21569285 | MS.gene83835:CDS | 40.0% | |
| TTATGTGGTTGGGAAAGTGA+GGG | + | chr7.4:21569439-21569458 | MS.gene83835:CDS | 40.0% | |
| ! | CTATGTATGAACGGTGGATT+TGG | - | chr7.4:21568458-21568477 | None:intergenic | 40.0% |
| ! | TCATGATGATGAAAACGTGG+TGG | - | chr7.4:21569050-21569069 | None:intergenic | 40.0% |
| ! | TGGGAATGCAACTTTTCCTA+CGG | + | chr7.4:21569370-21569389 | MS.gene83835:CDS | 40.0% |
| !! | AAGTGCGCTTTGAAGGAAAT+TGG | + | chr7.4:21569273-21569292 | MS.gene83835:CDS | 40.0% |
| !! | AGAGGTAAAGTTGGTATCCA+TGG | - | chr7.4:21568551-21568570 | None:intergenic | 40.0% |
| !! | CCGTTTAATGAGACCGATTT+TGG | + | chr7.4:21569626-21569645 | MS.gene83835:CDS | 40.0% |
| !! | TAATGAGACCGATTTTGGGT+GGG | + | chr7.4:21569631-21569650 | MS.gene83835:CDS | 40.0% |
| !! | TCATGGGCTAAACTTGCTAA+AGG | + | chr7.4:21568954-21568973 | MS.gene83835:CDS | 40.0% |
| !! | TTAATGAGACCGATTTTGGG+TGG | + | chr7.4:21569630-21569649 | MS.gene83835:CDS | 40.0% |
| !!! | ACCTCGTACCTTGTTTTCAT+TGG | - | chr7.4:21569204-21569223 | None:intergenic | 40.0% |
| ACTCACTACTATCCCTTTGC+AGG | + | chr7.4:21568645-21568664 | MS.gene83835:CDS | 45.0% | |
| CCAGCTTAATCTACCTGCAA+AGG | - | chr7.4:21568661-21568680 | None:intergenic | 45.0% | |
| CCTTTGCAGGTAGATTAAGC+TGG | + | chr7.4:21568658-21568677 | MS.gene83835:CDS | 45.0% | |
| GAACAAGTTTGTGTCACCGT+AGG | - | chr7.4:21569389-21569408 | None:intergenic | 45.0% | |
| GTTATGTGGTTGGGAAAGTG+AGG | + | chr7.4:21569438-21569457 | MS.gene83835:CDS | 45.0% | |
| ! | CTACTATTTTCCCAAAGGGG+TGG | - | chr7.4:21569083-21569102 | None:intergenic | 45.0% |
| ! | GTTCTTGATGGTTCTTCTGC+TGG | + | chr7.4:21568918-21568937 | MS.gene83835:CDS | 45.0% |
| !! | AACATGGTAGTGGCAAAGAG+TGG | - | chr7.4:21569134-21569153 | None:intergenic | 45.0% |
| !! | AATGAGACCGATTTTGGGTG+GGG | + | chr7.4:21569632-21569651 | MS.gene83835:CDS | 45.0% |
| !! | ACATGGTAGTGGCAAAGAGT+GGG | - | chr7.4:21569133-21569152 | None:intergenic | 45.0% |
| !! | GAGCTTGAGTTGATCACAGA+GGG | - | chr7.4:21568523-21568542 | None:intergenic | 45.0% |
| !!! | AGTGAGTGTTTTGGAGAGAG+AGG | - | chr7.4:21568628-21568647 | None:intergenic | 45.0% |
| ACAGAGGGAAAGAGAGAGTG+TGG | - | chr7.4:21568508-21568527 | None:intergenic | 50.0% | |
| AGGTTTCCCCCACCCAAAAT+CGG | - | chr7.4:21569642-21569661 | None:intergenic | 50.0% | |
| CAACTCAAGCTCCCTAACCA+TGG | + | chr7.4:21568531-21568550 | MS.gene83835:CDS | 50.0% | |
| CTGGGTCGTTCTGTTCTTGA+TGG | + | chr7.4:21568906-21568925 | MS.gene83835:CDS | 50.0% | |
| GAGTGACCCACAAGGAAACT+TGG | - | chr7.4:21568871-21568890 | None:intergenic | 50.0% | |
| GTGGGGGAAACCTGATTGTA+TGG | + | chr7.4:21569649-21569668 | MS.gene83835:CDS | 50.0% | |
| ! | AGTTTTCTCCACCACCCCTT+TGG | + | chr7.4:21569069-21569088 | MS.gene83835:CDS | 50.0% |
| ! | CTATTTTCCCAAAGGGGTGG+TGG | - | chr7.4:21569080-21569099 | None:intergenic | 50.0% |
| ! | GAAAGAGAGAGTGTGGTGGT+TGG | - | chr7.4:21568501-21568520 | None:intergenic | 50.0% |
| ! | GTTTTCTCCACCACCCCTTT+GGG | + | chr7.4:21569070-21569089 | MS.gene83835:CDS | 50.0% |
| !! | ACTCACTCTTGGTCTTGCTC+TGG | + | chr7.4:21568887-21568906 | MS.gene83835:CDS | 50.0% |
| !! | ATGAGACCGATTTTGGGTGG+GGG | + | chr7.4:21569633-21569652 | MS.gene83835:CDS | 50.0% |
| !! | CTCACTCTTGGTCTTGCTCT+GGG | + | chr7.4:21568888-21568907 | MS.gene83835:CDS | 50.0% |
| !! | GGAGCTTGAGTTGATCACAG+AGG | - | chr7.4:21568524-21568543 | None:intergenic | 50.0% |
| !! | GTGGTTGGTGTTGTCTCTGA+AGG | - | chr7.4:21568486-21568505 | None:intergenic | 50.0% |
| CCAAGAGTGAGTGACCCACA+AGG | - | chr7.4:21568879-21568898 | None:intergenic | 55.0% | |
| CCTTGTGGGTCACTCACTCT+TGG | + | chr7.4:21568876-21568895 | MS.gene83835:CDS | 55.0% | |
| ! | GAGGGAAAGAGAGAGTGTGG+TGG | - | chr7.4:21568505-21568524 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 21568444 | 21569835 | 21568444 | ID=MS.gene83835 |
| chr7.4 | mRNA | 21568444 | 21569835 | 21568444 | ID=MS.gene83835.t1;Parent=MS.gene83835 |
| chr7.4 | exon | 21568444 | 21569835 | 21568444 | ID=MS.gene83835.t1.exon1;Parent=MS.gene83835.t1 |
| chr7.4 | CDS | 21568444 | 21569835 | 21568444 | ID=cds.MS.gene83835.t1;Parent=MS.gene83835.t1 |
| Gene Sequence |
| Protein sequence |
