Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86315.t1 | XP_013465758.2 | 85.4 | 533 | 78 | 0 | 1 | 533 | 1 | 533 | 5.80E-152 | 548.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86315.t1 | Q9UQ35 | 40.1 | 142 | 80 | 2 | 1 | 138 | 1 | 141 | 1.0e-16 | 90.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86315.t1 | A0A396JF91 | 85.4 | 533 | 78 | 0 | 1 | 533 | 1 | 533 | 4.2e-152 | 548.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene86315 | 0.806146 | 9.48E-50 | -1.69E-46 |
| MS.gene049419 | MS.gene86315 | -0.81701 | 4.12E-52 | -1.69E-46 |
| MS.gene049861 | MS.gene86315 | 0.834945 | 2.24E-56 | -1.69E-46 |
| MS.gene050317 | MS.gene86315 | 0.815312 | 9.86E-52 | -1.69E-46 |
| MS.gene050941 | MS.gene86315 | 0.812793 | 3.55E-51 | -1.69E-46 |
| MS.gene051365 | MS.gene86315 | 0.817859 | 2.65E-52 | -1.69E-46 |
| MS.gene051452 | MS.gene86315 | 0.817561 | 3.09E-52 | -1.69E-46 |
| MS.gene051757 | MS.gene86315 | 0.80773 | 4.38E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene86315 | 0.803505 | 3.38E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene86315 | 0.829826 | 4.14E-55 | -1.69E-46 |
| MS.gene052518 | MS.gene86315 | 0.802012 | 6.87E-49 | -1.69E-46 |
| MS.gene053381 | MS.gene86315 | 0.828514 | 8.62E-55 | -1.69E-46 |
| MS.gene05344 | MS.gene86315 | -0.811012 | 8.66E-51 | -1.69E-46 |
| MS.gene053963 | MS.gene86315 | 0.801834 | 7.47E-49 | -1.69E-46 |
| MS.gene05469 | MS.gene86315 | 0.832967 | 6.99E-56 | -1.69E-46 |
| MS.gene055603 | MS.gene86315 | 0.845834 | 3.17E-59 | -1.69E-46 |
| MS.gene056403 | MS.gene86315 | 0.829597 | 4.71E-55 | -1.69E-46 |
| MS.gene05659 | MS.gene86315 | 0.809605 | 1.74E-50 | -1.69E-46 |
| MS.gene056605 | MS.gene86315 | 0.837062 | 6.49E-57 | -1.69E-46 |
| MS.gene056787 | MS.gene86315 | 0.801863 | 7.37E-49 | -1.69E-46 |
| MS.gene056849 | MS.gene86315 | 0.817055 | 4.02E-52 | -1.69E-46 |
| MS.gene056986 | MS.gene86315 | 0.821667 | 3.57E-53 | -1.69E-46 |
| MS.gene057055 | MS.gene86315 | 0.805937 | 1.05E-49 | -1.69E-46 |
| MS.gene05781 | MS.gene86315 | 0.806671 | 7.35E-50 | -1.69E-46 |
| MS.gene057999 | MS.gene86315 | 0.803068 | 4.16E-49 | -1.69E-46 |
| MS.gene058238 | MS.gene86315 | 0.824886 | 6.33E-54 | -1.69E-46 |
| MS.gene058278 | MS.gene86315 | 0.800965 | 1.13E-48 | -1.69E-46 |
| MS.gene058498 | MS.gene86315 | 0.807777 | 4.28E-50 | -1.69E-46 |
| MS.gene059050 | MS.gene86315 | 0.808289 | 3.33E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene86315 | 0.816835 | 4.51E-52 | -1.69E-46 |
| MS.gene059830 | MS.gene86315 | 0.808395 | 3.16E-50 | -1.69E-46 |
| MS.gene06010 | MS.gene86315 | 0.829348 | 5.41E-55 | -1.69E-46 |
| MS.gene06011 | MS.gene86315 | 0.859915 | 2.97E-63 | -1.69E-46 |
| MS.gene060586 | MS.gene86315 | 0.848486 | 5.95E-60 | -1.69E-46 |
| MS.gene060763 | MS.gene86315 | 0.842453 | 2.56E-58 | -1.69E-46 |
| MS.gene060830 | MS.gene86315 | 0.804386 | 2.21E-49 | -1.69E-46 |
| MS.gene060869 | MS.gene86315 | 0.801373 | 9.28E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene86315 | 0.800439 | 1.44E-48 | -1.69E-46 |
| MS.gene060937 | MS.gene86315 | 0.801753 | 7.76E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86315.t1 | MTR_1g010090 | 95.161 | 744 | 36 | 0 | 129 | 872 | 1 | 744 | 0.0 | 1183 |
| MS.gene86315.t1 | MTR_1g010100 | 100.000 | 112 | 0 | 0 | 1 | 112 | 1 | 112 | 4.90e-74 | 238 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86315.t1 | AT3G49601 | 56.250 | 208 | 75 | 4 | 1 | 202 | 1 | 198 | 2.19e-55 | 202 |
Find 251 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGGGATGAAGACGATTT+TGG | 0.202781 | 1.3:+10134298 | MS.gene86315:CDS |
| GAAATGATAATGATTATAAA+AGG | 0.232978 | 1.3:+10133672 | MS.gene86315:CDS |
| CAAGAGATGGAAAGCATAAA+AGG | 0.234081 | 1.3:+10133744 | MS.gene86315:CDS |
| CTGTCGTTTATTTCCTCCTT+TGG | 0.299374 | 1.3:-10133239 | None:intergenic |
| TTGAGGGATGGGGATGATTA+TGG | 0.306717 | 1.3:+10133941 | MS.gene86315:CDS |
| TGCCTCTTACTAGCCTTTAC+TGG | 0.312132 | 1.3:-10132861 | None:intergenic |
| ATTGTTTGACTTCTAGAATC+TGG | 0.313643 | 1.3:-10133353 | None:intergenic |
| CATTGGTACCAGACCCTCTT+GGG | 0.314345 | 1.3:-10130600 | None:intergenic |
| ATGAAGATAGAGATAGAGAT+AGG | 0.324574 | 1.3:+10133399 | MS.gene86315:CDS |
| GACAAGACAAACATGTTAAA+AGG | 0.325484 | 1.3:+10133102 | MS.gene86315:CDS |
| ACTGAAATCTCTGTCCAAAA+AGG | 0.326245 | 1.3:-10132484 | None:intergenic |
| TTTCCTTTCTAGCAGCAATT+TGG | 0.327828 | 1.3:-10132317 | None:intergenic |
| TCTAGGGATGGGGATGATTA+TGG | 0.332132 | 1.3:+10134121 | MS.gene86315:CDS |
| ATGAAGAAAGGAAGAACTTA+AGG | 0.338628 | 1.3:+10134068 | MS.gene86315:CDS |
| ATGGAGAAAGAAAGAGCTTA+AGG | 0.341025 | 1.3:+10134140 | MS.gene86315:CDS |
| GATGGACAAGATAGGAAGTT+TGG | 0.347099 | 1.3:+10133446 | MS.gene86315:CDS |
| TTGGAGAAAGAAAGCACTTA+AGG | 0.349814 | 1.3:+10134317 | MS.gene86315:CDS |
| ATGGAGAAAGAAAGAACTTA+AGG | 0.352771 | 1.3:+10133960 | MS.gene86315:CDS |
| TCAGCTGAATCTGCCGCTTT+CGG | 0.354578 | 1.3:-10130756 | None:intergenic |
| GAGAAAGAAGGCATTATAGA+AGG | 0.355736 | 1.3:+10134620 | MS.gene86315:CDS |
| AACAATATGTACAACGGAAT+CGG | 0.356790 | 1.3:+10130568 | None:intergenic |
| AGTAGCAGTGATAGTGAAAC+TGG | 0.362833 | 1.3:+10133149 | MS.gene86315:CDS |
| TGAAAACGATGGATCCAATA+TGG | 0.363035 | 1.3:+10130882 | MS.gene86315:CDS |
| TTGAGTTCTTTCTTTCTTTG+CGG | 0.366491 | 1.3:-10134459 | None:intergenic |
| AAACACTCACTTATCCATAT+TGG | 0.373034 | 1.3:-10130896 | None:intergenic |
| ATCATCCTTGTACTTTCTCT+TGG | 0.374078 | 1.3:-10132598 | None:intergenic |
| AGAGAGGCAGAAATTATAAC+AGG | 0.378338 | 1.3:+10133579 | MS.gene86315:CDS |
| TGAAGATAAGCTGATTGATC+AGG | 0.385864 | 1.3:+10130792 | MS.gene86315:CDS |
| TCATCCTTGTACTTTCTCTT+GGG | 0.389930 | 1.3:-10132597 | None:intergenic |
| TCAGCAACCTTCGAAGTTCT+CGG | 0.393476 | 1.3:-10130655 | None:intergenic |
| GGCAGTGTTAGGCATGCTTC+AGG | 0.402014 | 1.3:+10133080 | MS.gene86315:CDS |
| TTAGAGAAACAAAGACTAGA+AGG | 0.406927 | 1.3:+10134245 | MS.gene86315:CDS |
| GATTCTTTAAGAAAATCATA+TGG | 0.409706 | 1.3:+10133311 | MS.gene86315:CDS |
| TATGGAAGAACTAGAAAAGT+TGG | 0.411014 | 1.3:+10133194 | MS.gene86315:CDS |
| TGGAGAAAGAAAGCACTTAA+GGG | 0.413260 | 1.3:+10134318 | MS.gene86315:CDS |
| AGAGGTAATGCTGCAGGAAA+AGG | 0.424877 | 1.3:+10133260 | MS.gene86315:CDS |
| TTTCAGTCGGAAGAAACAAT+TGG | 0.425008 | 1.3:+10132500 | MS.gene86315:CDS |
| GTCAAATTTGCTAAGAATGA+TGG | 0.435852 | 1.3:+10133428 | MS.gene86315:CDS |
| TGAAAATATGAAGGGGTTTG+AGG | 0.438018 | 1.3:+10130675 | MS.gene86315:CDS |
| AGAAAGAGCTTAAGGGATGA+GGG | 0.439138 | 1.3:+10134148 | MS.gene86315:CDS |
| TGGAGAAAGAAAGAGCTTAA+GGG | 0.439219 | 1.3:+10134141 | MS.gene86315:CDS |
| GAAGGAAGACCTTGAGGGAT+GGG | 0.445522 | 1.3:+10133930 | MS.gene86315:CDS |
| TTGGACGAATTGATCGGAAT+AGG | 0.455169 | 1.3:+10133621 | MS.gene86315:CDS |
| GAAAATATGAAGGGGTTTGA+GGG | 0.457175 | 1.3:+10130676 | MS.gene86315:CDS |
| CCATTGGTACCAGACCCTCT+TGG | 0.460535 | 1.3:-10130601 | None:intergenic |
| AGAGAAGAGCTCTAGGGATG+TGG | 0.462100 | 1.3:+10134216 | MS.gene86315:CDS |
| TCACCAAATTGCTGCTAGAA+AGG | 0.462437 | 1.3:+10132314 | MS.gene86315:CDS |
| CTAAGCACCGCAAGAAAGGC+AGG | 0.463539 | 1.3:+10132763 | MS.gene86315:CDS |
| GGGATGATGATCGTGGAGAA+AGG | 0.464631 | 1.3:+10134641 | MS.gene86315:CDS |
| GGCTCTATTGATGCGGACTC+TGG | 0.469004 | 1.3:+10133053 | MS.gene86315:CDS |
| ACAATATGTACAACGGAATC+GGG | 0.472478 | 1.3:+10130569 | None:intergenic |
| AAGAAAGAGCTTAAGGGATG+AGG | 0.473531 | 1.3:+10134147 | MS.gene86315:CDS |
| TGGAGAAAGAAAGAACTTAA+GGG | 0.474386 | 1.3:+10133961 | MS.gene86315:CDS |
| AGAAAAGGAGCTCTAGGGAT+GGG | 0.475231 | 1.3:+10134110 | MS.gene86315:CDS |
| AATACAGATGGGAATGATGA+AGG | 0.476248 | 1.3:+10132396 | MS.gene86315:CDS |
| TAGTGCCAAGGTTGATGGAT+TGG | 0.477705 | 1.3:+10133289 | MS.gene86315:CDS |
| AAGAAAGAACTTAAGGGATG+AGG | 0.478065 | 1.3:+10133967 | MS.gene86315:CDS |
| CTAAGAATGATGGACAAGAT+AGG | 0.479516 | 1.3:+10133438 | MS.gene86315:CDS |
| AGTACGGATGATGAGAAAAC+AGG | 0.480046 | 1.3:+10132639 | MS.gene86315:CDS |
| AGAAAGAACTTAAGGGATGA+GGG | 0.480455 | 1.3:+10133968 | MS.gene86315:CDS |
| TGAAGAGGCGAGGAATAACT+TGG | 0.480606 | 1.3:+10130846 | MS.gene86315:CDS |
| AATGAAGATGATTCAAGAGA+TGG | 0.482878 | 1.3:+10133731 | MS.gene86315:CDS |
| TTAAGGGATGAGGGTGGCAG+AGG | 0.484214 | 1.3:+10134157 | MS.gene86315:CDS |
| TGAAGAAAGGAAGAACTTAA+GGG | 0.484449 | 1.3:+10134069 | MS.gene86315:CDS |
| GTGGAGAGAAAAGGAGCTCT+AGG | 0.485273 | 1.3:+10134104 | MS.gene86315:CDS |
| TGGACGAATTGATCGGAATA+GGG | 0.486136 | 1.3:+10133622 | MS.gene86315:CDS |
| GAAACATTGAAAGCTGCTCT+TGG | 0.486237 | 1.3:+10132348 | MS.gene86315:CDS |
| TAGAAGTCAAACAATAGCTA+AGG | 0.489116 | 1.3:+10133361 | MS.gene86315:CDS |
| GAGAAAAGAAGCTCTAAAGA+TGG | 0.490271 | 1.3:+10134037 | MS.gene86315:CDS |
| ATTCTTTAAGAAAATCATAT+GGG | 0.491036 | 1.3:+10133312 | MS.gene86315:CDS |
| AATAAAGAACTCTAGGTATG+AGG | 0.492130 | 1.3:+10134396 | MS.gene86315:CDS |
| GCTGATGAATTAAATACAGA+TGG | 0.493661 | 1.3:+10132384 | MS.gene86315:CDS |
| TGGGAGTTCCACCCTTCTTG+TGG | 0.493693 | 1.3:-10132578 | None:intergenic |
| ACTCTGGTAGAGGCAGTGTT+AGG | 0.494351 | 1.3:+10133069 | MS.gene86315:CDS |
| ATGATGAGAAAACAGGTAGA+AGG | 0.494540 | 1.3:+10132646 | MS.gene86315:CDS |
| AAGGATGAAGATTATCCTAC+AGG | 0.494644 | 1.3:+10133836 | MS.gene86315:CDS |
| GTGGAGAAAGGAAGCACAGA+AGG | 0.495191 | 1.3:+10134653 | MS.gene86315:CDS |
| AACCAGTAAAGGCTAGTAAG+AGG | 0.497041 | 1.3:+10132859 | MS.gene86315:CDS |
| TAGAGAAAGAAAGAACTCTC+TGG | 0.497810 | 1.3:+10133997 | MS.gene86315:CDS |
| GAGGGAGATCAAGGTACTGC+TGG | 0.500186 | 1.3:+10130694 | MS.gene86315:CDS |
| TTAAGGGATGGCAATGGCCG+TGG | 0.501216 | 1.3:+10134085 | MS.gene86315:CDS |
| GCCGAGGAGAGAAGAGCTCT+AGG | 0.501966 | 1.3:+10134209 | MS.gene86315:CDS |
| ATCATCATGAAGGCGTGCCC+AGG | 0.502347 | 1.3:+10132904 | MS.gene86315:CDS |
| AAATGATAATGATTATAAAA+GGG | 0.503477 | 1.3:+10133673 | MS.gene86315:CDS |
| CACTTCACTAGTCCTACGCC+TGG | 0.504019 | 1.3:-10132922 | None:intergenic |
| TTACAAACCCCAAGAGGGTC+TGG | 0.504419 | 1.3:+10130592 | MS.gene86315:CDS |
| AAGAAAGATCAGAAGGATTG+AGG | 0.504787 | 1.3:+10133895 | MS.gene86315:CDS |
| TCTCGGGATGGTGATGGCCG+AGG | 0.505947 | 1.3:+10134193 | MS.gene86315:CDS |
| TACAGGAAGAAAGCACTTGA+GGG | 0.506535 | 1.3:+10133853 | MS.gene86315:CDS |
| TAATGATTATAAAAGGGATC+AGG | 0.509329 | 1.3:+10133679 | MS.gene86315:CDS |
| AGAAAAGAAGCTCTAAAGAT+GGG | 0.509515 | 1.3:+10134038 | MS.gene86315:CDS |
| CCCTAGAGCTCTTCTCTCCT+CGG | 0.511915 | 1.3:-10134210 | None:intergenic |
| ATCAGCATCAGATTCCTCTT+CGG | 0.512144 | 1.3:-10132979 | None:intergenic |
| TCTAAAGCAGCTAGGATCAG+AGG | 0.513743 | 1.3:+10133533 | MS.gene86315:CDS |
| AAGGAAGACCTTGAGGGATG+GGG | 0.513937 | 1.3:+10133931 | MS.gene86315:CDS |
| GAAGGTTGCTGAAAATATGA+AGG | 0.515977 | 1.3:+10130666 | MS.gene86315:CDS |
| GTGTAGAAATAAAGAACTCT+AGG | 0.518740 | 1.3:+10134389 | MS.gene86315:CDS |
| AAGCAGAAAACTAGGAGGTA+TGG | 0.521789 | 1.3:+10133032 | MS.gene86315:CDS |
| ATGGAAGAACTAGAAAAGTT+GGG | 0.521877 | 1.3:+10133195 | MS.gene86315:CDS |
| ATACAGATGGGAATGATGAA+GGG | 0.522361 | 1.3:+10132397 | MS.gene86315:CDS |
| AAGAGATGGAAAGCATAAAA+GGG | 0.524413 | 1.3:+10133745 | MS.gene86315:CDS |
| TACTGCTGGTGTTAGTAGAA+AGG | 0.524874 | 1.3:+10130708 | MS.gene86315:CDS |
| AAGGGGTTTGAGGGAGATCA+AGG | 0.526411 | 1.3:+10130685 | MS.gene86315:CDS |
| GATGGGAATGATGAAGGGGC+TGG | 0.527895 | 1.3:+10132402 | MS.gene86315:CDS |
| GGATTATGAAACAAGAAGGA+AGG | 0.531442 | 1.3:+10133646 | MS.gene86315:CDS |
| GAGAAAGAGCTCAAGGGATG+AGG | 0.531478 | 1.3:+10134504 | MS.gene86315:CDS |
| GATGTTGAATCACAATCTGT+TGG | 0.531914 | 1.3:+10133602 | MS.gene86315:CDS |
| AGAAAGAAGGCATTATAGAA+GGG | 0.532131 | 1.3:+10134621 | MS.gene86315:CDS |
| ACATCTAAGCACCGCAAGAA+AGG | 0.532339 | 1.3:+10132759 | MS.gene86315:CDS |
| GGAAGGAAGACCTTGAGGGA+TGG | 0.533795 | 1.3:+10133929 | MS.gene86315:CDS |
| TGAAGATAGAGATAGAGATA+GGG | 0.536073 | 1.3:+10133400 | MS.gene86315:CDS |
| ATTGATGCGGACTCTGGTAG+AGG | 0.536751 | 1.3:+10133059 | MS.gene86315:CDS |
| GAGAAGAGCTCTAGGGATGT+GGG | 0.537490 | 1.3:+10134217 | MS.gene86315:CDS |
| GAGGTAATGCTGCAGGAAAA+GGG | 0.538469 | 1.3:+10133261 | MS.gene86315:CDS |
| GAGGAGAAAGAAAGAACTCT+CGG | 0.539758 | 1.3:+10134176 | MS.gene86315:CDS |
| AACGACAGAGGTAATGCTGC+AGG | 0.540250 | 1.3:+10133254 | MS.gene86315:CDS |
| AGAGGGGATGATGAGTATCA+TGG | 0.540257 | 1.3:+10134550 | MS.gene86315:CDS |
| CCAAGAGGGTCTGGTACCAA+TGG | 0.542448 | 1.3:+10130601 | MS.gene86315:CDS |
| AAGGAAGAACTCAAGGGAAG+AGG | 0.544319 | 1.3:+10134432 | MS.gene86315:CDS |
| AAGAAAGCACTTAAGGGATG+AGG | 0.545463 | 1.3:+10134324 | MS.gene86315:CDS |
| GACTTGAGAAGCAGAAAACT+AGG | 0.546480 | 1.3:+10133024 | MS.gene86315:CDS |
| GGGAGGATTATGAAACAAGA+AGG | 0.546874 | 1.3:+10133642 | MS.gene86315:CDS |
| CAAGAGGGTCTGGTACCAAT+GGG | 0.547119 | 1.3:+10130602 | MS.gene86315:CDS |
| ACAGAGAGAGAAAGAGCTCA+AGG | 0.548074 | 1.3:+10134497 | MS.gene86315:CDS |
| GACACAAAGTGCCACAAGAA+GGG | 0.549590 | 1.3:+10132567 | MS.gene86315:CDS |
| AAGGAAGCACAGAAGGGAGT+AGG | 0.549615 | 1.3:+10134660 | MS.gene86315:CDS |
| GAGAAAAGGAGCTCTAGGGA+TGG | 0.550005 | 1.3:+10134109 | MS.gene86315:CDS |
| ATGGGGATGATTATGAAGAA+AGG | 0.550971 | 1.3:+10134056 | MS.gene86315:CDS |
| GAAAAGGAGCTCTAGGGATG+GGG | 0.552267 | 1.3:+10134111 | MS.gene86315:CDS |
| AGTGATAGTGATCGCAGGTA+TGG | 0.552398 | 1.3:+10133176 | MS.gene86315:CDS |
| CATCCACCCTGCCTTTCTTG+CGG | 0.553444 | 1.3:-10132770 | None:intergenic |
| TGCAGGAAGGAAGACCTTGA+GGG | 0.553552 | 1.3:+10133925 | MS.gene86315:CDS |
| GAAGCACAAAACAGAAGGGA+TGG | 0.557465 | 1.3:+10134358 | MS.gene86315:CDS |
| TACAGGAAGAAAGACCTTGA+GGG | 0.558041 | 1.3:+10134282 | MS.gene86315:CDS |
| GATGAAGGGGCTGGAAACGA+AGG | 0.559192 | 1.3:+10132411 | MS.gene86315:CDS |
| GCAAAGAAAGGAAGAACTCA+AGG | 0.561372 | 1.3:+10134425 | MS.gene86315:CDS |
| ATAGAGAAGCACAAAACAGA+AGG | 0.562661 | 1.3:+10134353 | MS.gene86315:CDS |
| CTACAGGAAGAAAGCACTTG+AGG | 0.564894 | 1.3:+10133852 | MS.gene86315:CDS |
| AGAATCCAATCCATCAACCT+TGG | 0.565326 | 1.3:-10133294 | None:intergenic |
| CTAAAGCAGCTAGGATCAGA+GGG | 0.565611 | 1.3:+10133534 | MS.gene86315:CDS |
| ATGAGGATGATCGCAAAGAA+AGG | 0.565805 | 1.3:+10134413 | MS.gene86315:CDS |
| ATGAAGGCGTGCCCAGGCGT+AGG | 0.565815 | 1.3:+10132910 | MS.gene86315:CDS |
| GAAGATAAGCTGATTGATCA+GGG | 0.567835 | 1.3:+10130793 | MS.gene86315:CDS |
| AAGGTTGCTGAAAATATGAA+GGG | 0.570610 | 1.3:+10130667 | MS.gene86315:CDS |
| AAGAACTCTCGGGATGGTGA+TGG | 0.570968 | 1.3:+10134187 | MS.gene86315:CDS |
| TTCTTGAGCATGACCGAAAG+CGG | 0.571093 | 1.3:+10130743 | MS.gene86315:CDS |
| CGTGAAGCCGAGAACTTCGA+AGG | 0.571228 | 1.3:+10130648 | MS.gene86315:CDS |
| GCAAAGAAAGAAAGAACTCA+AGG | 0.572016 | 1.3:+10134461 | MS.gene86315:CDS |
| CAGTCGGAAGAAACAATTGG+AGG | 0.572032 | 1.3:+10132503 | MS.gene86315:CDS |
| GATTATGAAACAAGAAGGAA+GGG | 0.574761 | 1.3:+10133647 | MS.gene86315:CDS |
| AGGATTGAGGATGAACGTGC+AGG | 0.578381 | 1.3:+10133908 | MS.gene86315:CDS |
| AAGCACAAAACAGAAGGGAT+GGG | 0.579129 | 1.3:+10134359 | MS.gene86315:CDS |
| AAAAGCTTAAGAGATGAAGA+TGG | 0.579544 | 1.3:+10133791 | MS.gene86315:CDS |
| CCGAGGAGAGAAGAGCTCTA+GGG | 0.580921 | 1.3:+10134210 | MS.gene86315:CDS |
| ATGGAGAAAGAAAGCGCGGA+AGG | 0.581208 | 1.3:+10134569 | MS.gene86315:CDS |
| AGACACAAAGTGCCACAAGA+AGG | 0.581820 | 1.3:+10132566 | MS.gene86315:CDS |
| TATGGGAGAGATTATAAAGA+GGG | 0.582883 | 1.3:+10133329 | MS.gene86315:CDS |
| ATTCTGATAGTGATGCTAAG+AGG | 0.583073 | 1.3:+10132709 | MS.gene86315:CDS |
| AGGATCGAGGATGATCGTAC+AGG | 0.583123 | 1.3:+10134265 | MS.gene86315:CDS |
| TCAAGGGATGAGGATGTTCG+TGG | 0.583178 | 1.3:+10134514 | MS.gene86315:CDS |
| GCAATGGCCGTGGAGAGAAA+AGG | 0.583518 | 1.3:+10134095 | MS.gene86315:CDS |
| TGGAGAGAGAAGGCATGGAA+AGG | 0.586417 | 1.3:+10133817 | MS.gene86315:CDS |
| GTGGGGAAAGAAAGCACAGA+GGG | 0.586721 | 1.3:+10134533 | MS.gene86315:CDS |
| ACGGAGAAAGAAAGATCAGA+AGG | 0.587778 | 1.3:+10133888 | MS.gene86315:CDS |
| GGTCGTGGAGAGAGAAGGCA+TGG | 0.587909 | 1.3:+10133812 | MS.gene86315:CDS |
| AAGGGACGAGGAAGACCGAC+GGG | 0.589493 | 1.3:+10133763 | MS.gene86315:CDS |
| CTGATGAATTAAATACAGAT+GGG | 0.590577 | 1.3:+10132385 | MS.gene86315:CDS |
| CAAGGGATGAGGATGTTCGT+GGG | 0.591261 | 1.3:+10134515 | MS.gene86315:CDS |
| AATGAAAATGAAGAAAGAGA+TGG | 0.593131 | 1.3:+10133506 | MS.gene86315:CDS |
| ATCAGATTCATCACTACTGT+CGG | 0.593798 | 1.3:-10132688 | None:intergenic |
| TACAGATGGGAATGATGAAG+GGG | 0.594685 | 1.3:+10132398 | MS.gene86315:CDS |
| AGAAGTCAAACAATAGCTAA+GGG | 0.595420 | 1.3:+10133362 | MS.gene86315:CDS |
| AGCGAAGAGAAGTGAGCCAA+AGG | 0.596644 | 1.3:+10133223 | MS.gene86315:CDS |
| AGTAAGAGGCATGATTCAGA+TGG | 0.597582 | 1.3:+10132873 | MS.gene86315:CDS |
| TTATACTGAGGCTGAGATTG+CGG | 0.598508 | 1.3:+10130816 | MS.gene86315:CDS |
| TGGAGAGAAAAGGAGCTCTA+GGG | 0.599906 | 1.3:+10134105 | MS.gene86315:CDS |
| AGGAGAAAGAAAGAACTCTC+GGG | 0.601526 | 1.3:+10134177 | MS.gene86315:CDS |
| AGCACAAAACAGAAGGGATG+GGG | 0.601555 | 1.3:+10134360 | MS.gene86315:CDS |
| TGATTTCTCTTCTGATAGTG+AGG | 0.602201 | 1.3:+10132806 | MS.gene86315:CDS |
| ATAATCATCCCCATCCCTCA+AGG | 0.602864 | 1.3:-10133939 | None:intergenic |
| CGGAGAAGCTTGAAGAGGCG+AGG | 0.603883 | 1.3:+10130836 | MS.gene86315:CDS |
| AAAGGGACGAGGAAGACCGA+CGG | 0.606203 | 1.3:+10133762 | MS.gene86315:CDS |
| ATGGTTATTCTAAAGCAGCT+AGG | 0.608813 | 1.3:+10133525 | MS.gene86315:CDS |
| ATTGGTACCAGACCCTCTTG+GGG | 0.610172 | 1.3:-10130599 | None:intergenic |
| TCTCTGGATGGCAATGTCCG+TGG | 0.610872 | 1.3:+10134013 | MS.gene86315:CDS |
| GGAGATTCTGATCATCATGA+AGG | 0.612338 | 1.3:+10132894 | MS.gene86315:CDS |
| AGAAAGCACTTAAGGGATGA+GGG | 0.614396 | 1.3:+10134325 | MS.gene86315:CDS |
| GGAATCTGATGCTGATAGTG+AGG | 0.614998 | 1.3:+10132986 | MS.gene86315:CDS |
| ATGATGGTCATGGAGAAAGA+AGG | 0.618260 | 1.3:+10134608 | MS.gene86315:CDS |
| GAAAGGAAGAACTTAAGGGA+TGG | 0.618658 | 1.3:+10134073 | MS.gene86315:CDS |
| TTAAGAGATGAAGATGGTCG+TGG | 0.619971 | 1.3:+10133797 | MS.gene86315:CDS |
| AATCTGTTGGACGAATTGAT+CGG | 0.619988 | 1.3:+10133615 | MS.gene86315:CDS |
| AACTCCCAAGAGAAAGTACA+AGG | 0.620318 | 1.3:+10132593 | MS.gene86315:CDS |
| AAAATCGTCTTCATCCCTCA+AGG | 0.623427 | 1.3:-10134296 | None:intergenic |
| GTGCAGGAAGGAAGACCTTG+AGG | 0.624100 | 1.3:+10133924 | MS.gene86315:CDS |
| AACAAAGACTAGAAGGATCG+AGG | 0.625322 | 1.3:+10134252 | MS.gene86315:CDS |
| ATCTGATTCAGATAGCAGTA+CGG | 0.625946 | 1.3:+10132623 | MS.gene86315:CDS |
| TGATAGTGATGCTAAGAGGA+AGG | 0.626197 | 1.3:+10132713 | MS.gene86315:CDS |
| GAAAGAAAGAACTCTCTGGA+TGG | 0.626232 | 1.3:+10134001 | MS.gene86315:CDS |
| CTCAAGTGCTTTCTTCCTGT+AGG | 0.626993 | 1.3:-10133851 | None:intergenic |
| TTGAGGATGAACGTGCAGGA+AGG | 0.627354 | 1.3:+10133912 | MS.gene86315:CDS |
| CAGAGAGAGAAAGAGCTCAA+GGG | 0.628373 | 1.3:+10134498 | MS.gene86315:CDS |
| ACAAAGTGCCACAAGAAGGG+TGG | 0.628877 | 1.3:+10132570 | MS.gene86315:CDS |
| ATCACTGCTACTCTCATCAG+AGG | 0.629147 | 1.3:-10133138 | None:intergenic |
| GCAGCAGTGATAGTGATCGC+AGG | 0.630849 | 1.3:+10133171 | MS.gene86315:CDS |
| TGGAGAAAGGAAGCACAGAA+GGG | 0.632562 | 1.3:+10134654 | MS.gene86315:CDS |
| GTTGCTTTGAATGTACCCAT+TGG | 0.633884 | 1.3:-10130617 | None:intergenic |
| TGGAGAAAGAAAGCGCGGAA+GGG | 0.634848 | 1.3:+10134570 | MS.gene86315:CDS |
| ATGAAGGGGCTGGAAACGAA+GGG | 0.636206 | 1.3:+10132412 | MS.gene86315:CDS |
| ATATGGGAGAGATTATAAAG+AGG | 0.636317 | 1.3:+10133328 | MS.gene86315:CDS |
| ACTTCACTAGTCCTACGCCT+GGG | 0.636349 | 1.3:-10132921 | None:intergenic |
| CAAAACAGAAGGGATGGGGA+TGG | 0.637014 | 1.3:+10134364 | MS.gene86315:CDS |
| TATAGAAGGGATGATGATCG+TGG | 0.640097 | 1.3:+10134634 | MS.gene86315:CDS |
| AAGATGGTCGTGGAGAGAGA+AGG | 0.641121 | 1.3:+10133807 | MS.gene86315:CDS |
| GTAGGACTAGTGAAGTGAAG+AGG | 0.641552 | 1.3:+10132928 | MS.gene86315:CDS |
| TTGAGGGATGAAGATGATCA+CGG | 0.641692 | 1.3:+10133869 | MS.gene86315:CDS |
| ATCGGGTTACAAACCCCAAG+AGG | 0.642712 | 1.3:+10130586 | MS.gene86315:CDS |
| TGATGCTAAGAGGAAGGTCA+AGG | 0.643266 | 1.3:+10132719 | MS.gene86315:CDS |
| AGAGGCGAGGAATAACTTGG+AGG | 0.647831 | 1.3:+10130849 | MS.gene86315:CDS |
| GAAAAGAAGCTCTAAAGATG+GGG | 0.648182 | 1.3:+10134039 | MS.gene86315:CDS |
| TAGAGAAGCACAAAACAGAA+GGG | 0.648296 | 1.3:+10134354 | MS.gene86315:CDS |
| GTACAGGAAGAAAGACCTTG+AGG | 0.650077 | 1.3:+10134281 | MS.gene86315:CDS |
| CAAACATCATGATTCCGAAG+AGG | 0.650482 | 1.3:+10132965 | MS.gene86315:CDS |
| GAGGTATGGCTCTATTGATG+CGG | 0.659250 | 1.3:+10133046 | MS.gene86315:CDS |
| CAAAGAAAGAAAGAACTCAA+GGG | 0.659434 | 1.3:+10134462 | MS.gene86315:CDS |
| GAAAGAAAGAACTCTCGGGA+TGG | 0.661874 | 1.3:+10134181 | MS.gene86315:CDS |
| GCTGCAGCTGATGAAAACGA+TGG | 0.664817 | 1.3:+10130871 | MS.gene86315:CDS |
| TGGAAAGCATAAAAGGGACG+AGG | 0.666249 | 1.3:+10133751 | MS.gene86315:CDS |
| ACGAATTGATCGGAATAGGG+AGG | 0.666293 | 1.3:+10133625 | MS.gene86315:CDS |
| CAAAGAAAGGAAGAACTCAA+GGG | 0.668656 | 1.3:+10134426 | MS.gene86315:CDS |
| GTCGCGAACAATATGTACAA+CGG | 0.669321 | 1.3:+10130562 | None:intergenic |
| AAGGGATGAGGATGTTCGTG+GGG | 0.670207 | 1.3:+10134516 | MS.gene86315:CDS |
| GATTGCGGAGAAGCTTGAAG+AGG | 0.675067 | 1.3:+10130831 | MS.gene86315:CDS |
| AAGAGCTTAAGGGATGAGGG+TGG | 0.676066 | 1.3:+10134151 | MS.gene86315:CDS |
| TCGGGTTACAAACCCCAAGA+GGG | 0.677908 | 1.3:+10130587 | MS.gene86315:CDS |
| GATAGTGAGGAAGAGAAACA+TGG | 0.678163 | 1.3:+10132999 | MS.gene86315:CDS |
| AGGTTGCTGAAAATATGAAG+GGG | 0.679407 | 1.3:+10130668 | MS.gene86315:CDS |
| TTGAGAAGCAGAAAACTAGG+AGG | 0.679981 | 1.3:+10133027 | MS.gene86315:CDS |
| TAAGCACCGCAAGAAAGGCA+GGG | 0.680248 | 1.3:+10132764 | MS.gene86315:CDS |
| AAGAACTTAAGGGATGGCAA+TGG | 0.685392 | 1.3:+10134079 | MS.gene86315:CDS |
| GAAGAGAAGTGAGCCAAAGG+AGG | 0.686174 | 1.3:+10133226 | MS.gene86315:CDS |
| AAGACAAACATGTTAAAAGG+CGG | 0.697682 | 1.3:+10133105 | MS.gene86315:CDS |
| GCACCGCAAGAAAGGCAGGG+TGG | 0.701049 | 1.3:+10132767 | MS.gene86315:CDS |
| TATCATGGAGAAAGAAAGCG+CGG | 0.706879 | 1.3:+10134565 | MS.gene86315:CDS |
| GATTGATCAGGGTTATACTG+AGG | 0.707882 | 1.3:+10130804 | MS.gene86315:CDS |
| AATGAAACTTCTGATCAGAG+AGG | 0.718112 | 1.3:+10133563 | MS.gene86315:CDS |
| GAGAGGCAGAAATTATAACA+GGG | 0.720186 | 1.3:+10133580 | MS.gene86315:CDS |
| AAGGAGGAAATAAACGACAG+AGG | 0.720901 | 1.3:+10133242 | MS.gene86315:CDS |
| AAGAACTTAAGGGATGAGGG+TGG | 0.740111 | 1.3:+10133971 | MS.gene86315:CDS |
| TGGGGAAAGAAAGCACAGAG+GGG | 0.758387 | 1.3:+10134534 | MS.gene86315:CDS |
| CGTGGGGAAAGAAAGCACAG+AGG | 0.779210 | 1.3:+10134532 | MS.gene86315:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGATAATGATTATAAAA+GGG | + | chr1.3:10133673-10133692 | MS.gene86315:CDS | 10.0% |
| !! | ATCATTAACAAAAACTTATA+TGG | + | chr1.3:10132264-10132283 | MS.gene86315:intron | 15.0% |
| !! | ATTCACAAAAAAAAATAGTT+AGG | - | chr1.3:10132218-10132237 | None:intergenic | 15.0% |
| !! | TTAAATTATTATTGGTATCA+AGG | - | chr1.3:10131203-10131222 | None:intergenic | 15.0% |
| !! | TTCACAAAAAAAAATAGTTA+GGG | - | chr1.3:10132217-10132236 | None:intergenic | 15.0% |
| !!! | ATAGTTGATTCTTAAAAAAT+GGG | - | chr1.3:10131624-10131643 | None:intergenic | 15.0% |
| !!! | ATATTTCAGATATTTTTTCA+TGG | - | chr1.3:10132149-10132168 | None:intergenic | 15.0% |
| !!! | ATTCTTTAAGAAAATCATAT+GGG | + | chr1.3:10133312-10133331 | MS.gene86315:CDS | 15.0% |
| !!! | GAAATGATAATGATTATAAA+AGG | + | chr1.3:10133672-10133691 | MS.gene86315:CDS | 15.0% |
| !!! | TATAGTTGATTCTTAAAAAA+TGG | - | chr1.3:10131625-10131644 | None:intergenic | 15.0% |
| !! | AAGTAATAAAAAACCAGTAA+AGG | + | chr1.3:10132848-10132867 | MS.gene86315:CDS | 20.0% |
| !! | GAAAAAGAAAAAGAAAAAAC+AGG | - | chr1.3:10132072-10132091 | None:intergenic | 20.0% |
| !! | TAAAAGAACATCATGATTAA+TGG | - | chr1.3:10131971-10131990 | None:intergenic | 20.0% |
| !! | TAATGAATTAACTATTTCCA+CGG | + | chr1.3:10131862-10131881 | MS.gene86315:intron | 20.0% |
| !! | TCACAAAAAAAAATAGTTAG+GGG | - | chr1.3:10132216-10132235 | None:intergenic | 20.0% |
| !! | TCTTCTGACAAAAAAAATAT+TGG | + | chr1.3:10131383-10131402 | MS.gene86315:intron | 20.0% |
| !! | TTAAATTATTATTGGCATCA+AGG | - | chr1.3:10131066-10131085 | None:intergenic | 20.0% |
| !!! | AAAACGTGTTTTTTTTTTTC+AGG | + | chr1.3:10131556-10131575 | MS.gene86315:intron | 20.0% |
| !!! | AAAACTTATATGGAATTTTC+AGG | + | chr1.3:10132274-10132293 | MS.gene86315:intron | 20.0% |
| !!! | AAACGTGTTTTTTTTTTTCA+GGG | + | chr1.3:10131557-10131576 | MS.gene86315:intron | 20.0% |
| !!! | AGTTTTTGTTAATGATACTT+AGG | - | chr1.3:10132260-10132279 | None:intergenic | 20.0% |
| !!! | GATTCTTTAAGAAAATCATA+TGG | + | chr1.3:10133311-10133330 | MS.gene86315:CDS | 20.0% |
| !!! | TATAAGTATTTAGAACAGAT+TGG | - | chr1.3:10132100-10132119 | None:intergenic | 20.0% |
| !!! | TCAATTTGTATTTTTTAGAC+TGG | + | chr1.3:10131426-10131445 | MS.gene86315:intron | 20.0% |
| !!! | TGGCTTACTTTTTTTAAAAA+TGG | + | chr1.3:10131690-10131709 | MS.gene86315:intron | 20.0% |
| ! | AATGAAAATGAAGAAAGAGA+TGG | + | chr1.3:10133506-10133525 | MS.gene86315:CDS | 25.0% |
| ! | AATGAATTAACTATTTCCAC+GGG | + | chr1.3:10131863-10131882 | MS.gene86315:intron | 25.0% |
| ! | ACTCTTCTGACAAAAATTAT+TGG | + | chr1.3:10131886-10131905 | MS.gene86315:intron | 25.0% |
| ! | ATGAAGAAAAAAAACATGGA+AGG | + | chr1.3:10133708-10133727 | MS.gene86315:CDS | 25.0% |
| ! | CAAAAAAAATATTGGCATGT+TGG | + | chr1.3:10131391-10131410 | MS.gene86315:intron | 25.0% |
| ! | CTGATGAATTAAATACAGAT+GGG | + | chr1.3:10132385-10132404 | MS.gene86315:CDS | 25.0% |
| ! | TAATGATTATAAAAGGGATC+AGG | + | chr1.3:10133679-10133698 | MS.gene86315:CDS | 25.0% |
| ! | TTATAAATGCAGTTACAGAA+AGG | + | chr1.3:10132184-10132203 | MS.gene86315:intron | 25.0% |
| ! | TTATGAATTAACTGTTTCCA+CGG | + | chr1.3:10131357-10131376 | MS.gene86315:intron | 25.0% |
| !! | GCTTGAAAAAAGTGATTTTA+AGG | + | chr1.3:10131526-10131545 | MS.gene86315:intron | 25.0% |
| !!! | GATTATTTTAAGCTCTGTTT+GGG | - | chr1.3:10132043-10132062 | None:intergenic | 25.0% |
| !!! | TGATTATTTTAAGCTCTGTT+TGG | - | chr1.3:10132044-10132063 | None:intergenic | 25.0% |
| !!! | TTCCATGTTTTTTTTCTTCA+TGG | - | chr1.3:10133709-10133728 | None:intergenic | 25.0% |
| !!! | TTTTTCAAGCTTAACCAAAT+GGG | - | chr1.3:10131516-10131535 | None:intergenic | 25.0% |
| !!! | TTTTTTCAAGCTTAACCAAA+TGG | - | chr1.3:10131517-10131536 | None:intergenic | 25.0% |
| AAAAGCTTAAGAGATGAAGA+TGG | + | chr1.3:10133791-10133810 | MS.gene86315:CDS | 30.0% | |
| AAACACTCACTTATCCATAT+TGG | - | chr1.3:10130899-10130918 | None:intergenic | 30.0% | |
| AACTATAAGTAGTTTCCTGA+GGG | + | chr1.3:10131638-10131657 | MS.gene86315:intron | 30.0% | |
| AAGACAAACATGTTAAAAGG+CGG | + | chr1.3:10133105-10133124 | MS.gene86315:CDS | 30.0% | |
| AAGGTTGCTGAAAATATGAA+GGG | + | chr1.3:10130667-10130686 | MS.gene86315:CDS | 30.0% | |
| AATAAAGAACTCTAGGTATG+AGG | + | chr1.3:10134396-10134415 | MS.gene86315:CDS | 30.0% | |
| AATGAAGATGATTCAAGAGA+TGG | + | chr1.3:10133731-10133750 | MS.gene86315:CDS | 30.0% | |
| AGAAGTCAAACAATAGCTAA+GGG | + | chr1.3:10133362-10133381 | MS.gene86315:CDS | 30.0% | |
| ATATGGGAGAGATTATAAAG+AGG | + | chr1.3:10133328-10133347 | MS.gene86315:CDS | 30.0% | |
| ATGAAGAAAGGAAGAACTTA+AGG | + | chr1.3:10134068-10134087 | MS.gene86315:CDS | 30.0% | |
| ATGAAGATAGAGATAGAGAT+AGG | + | chr1.3:10133399-10133418 | MS.gene86315:CDS | 30.0% | |
| ATGCAATTAGACATAGTTTC+AGG | + | chr1.3:10131475-10131494 | MS.gene86315:intron | 30.0% | |
| ATGGAAGAACTAGAAAAGTT+GGG | + | chr1.3:10133195-10133214 | MS.gene86315:CDS | 30.0% | |
| ATGGAGAAAGAAAGAACTTA+AGG | + | chr1.3:10133960-10133979 | MS.gene86315:CDS | 30.0% | |
| CAAAGAAAGAAAGAACTCAA+GGG | + | chr1.3:10134462-10134481 | MS.gene86315:CDS | 30.0% | |
| GACAAAAATTATTGGCATGT+TGG | + | chr1.3:10131894-10131913 | MS.gene86315:intron | 30.0% | |
| GACAAGACAAACATGTTAAA+AGG | + | chr1.3:10133102-10133121 | MS.gene86315:CDS | 30.0% | |
| GACCATGAAGAAAAAAAACA+TGG | + | chr1.3:10133704-10133723 | MS.gene86315:CDS | 30.0% | |
| GATTATGAAACAAGAAGGAA+GGG | + | chr1.3:10133647-10133666 | MS.gene86315:CDS | 30.0% | |
| GCTGATGAATTAAATACAGA+TGG | + | chr1.3:10132384-10132403 | MS.gene86315:CDS | 30.0% | |
| GTGTAGAAATAAAGAACTCT+AGG | + | chr1.3:10134389-10134408 | MS.gene86315:CDS | 30.0% | |
| TAGAAGTCAAACAATAGCTA+AGG | + | chr1.3:10133361-10133380 | MS.gene86315:CDS | 30.0% | |
| TATGAATTAACTGTTTCCAC+GGG | + | chr1.3:10131358-10131377 | MS.gene86315:intron | 30.0% | |
| TATGGAAGAACTAGAAAAGT+TGG | + | chr1.3:10133194-10133213 | MS.gene86315:CDS | 30.0% | |
| TATGGGAGAGATTATAAAGA+GGG | + | chr1.3:10133329-10133348 | MS.gene86315:CDS | 30.0% | |
| TGAAGAAAGGAAGAACTTAA+GGG | + | chr1.3:10134069-10134088 | MS.gene86315:CDS | 30.0% | |
| TGAAGATAGAGATAGAGATA+GGG | + | chr1.3:10133400-10133419 | MS.gene86315:CDS | 30.0% | |
| TGCAATTAGACATAGTTTCA+GGG | + | chr1.3:10131476-10131495 | MS.gene86315:intron | 30.0% | |
| TGGAGAAAGAAAGAACTTAA+GGG | + | chr1.3:10133961-10133980 | MS.gene86315:CDS | 30.0% | |
| TTAGAGAAACAAAGACTAGA+AGG | + | chr1.3:10134245-10134264 | MS.gene86315:CDS | 30.0% | |
| TTGAGTTCTTTCTTTCTTTG+CGG | - | chr1.3:10134462-10134481 | None:intergenic | 30.0% | |
| ! | AAGAGATGGAAAGCATAAAA+GGG | + | chr1.3:10133745-10133764 | MS.gene86315:CDS | 30.0% |
| ! | ATATGGATAAGTGAGTGTTT+TGG | + | chr1.3:10130899-10130918 | MS.gene86315:intron | 30.0% |
| ! | ATTGTTGGTTAGCATGATAT+TGG | + | chr1.3:10131017-10131036 | MS.gene86315:intron | 30.0% |
| ! | GTCTTTAACACTCTTTTTCT+TGG | - | chr1.3:10132550-10132569 | None:intergenic | 30.0% |
| ! | GTTGATTCTTAAAAAATGGG+TGG | - | chr1.3:10131621-10131640 | None:intergenic | 30.0% |
| !! | AAGTGGTTAGTTTCATGTTA+GGG | + | chr1.3:10131329-10131348 | MS.gene86315:intron | 30.0% |
| !! | AGAAAAGAAGCTCTAAAGAT+GGG | + | chr1.3:10134038-10134057 | MS.gene86315:CDS | 30.0% |
| !! | AGAAAGAAGGCATTATAGAA+GGG | + | chr1.3:10134621-10134640 | MS.gene86315:CDS | 30.0% |
| !! | AGTGGTTAGTTTCATATTAG+AGG | + | chr1.3:10131818-10131837 | MS.gene86315:intron | 30.0% |
| !! | ATTGTTTGACTTCTAGAATC+TGG | - | chr1.3:10133356-10133375 | None:intergenic | 30.0% |
| !! | GTCAAATTTGCTAAGAATGA+TGG | + | chr1.3:10133428-10133447 | MS.gene86315:CDS | 30.0% |
| !! | TAAGTGGTTAGTTTCATGTT+AGG | + | chr1.3:10131328-10131347 | MS.gene86315:intron | 30.0% |
| !! | TGGATTTTGATAGTTGTGTT+AGG | + | chr1.3:10130919-10130938 | MS.gene86315:intron | 30.0% |
| AAAAATAGTGCCAAGGTTGA+TGG | + | chr1.3:10133284-10133303 | MS.gene86315:CDS | 35.0% | |
| AAAAGGGAAAAATAGTGCCA+AGG | + | chr1.3:10133277-10133296 | MS.gene86315:CDS | 35.0% | |
| AAGAAAGAACTTAAGGGATG+AGG | + | chr1.3:10133967-10133986 | MS.gene86315:CDS | 35.0% | |
| AAGAAAGATCAGAAGGATTG+AGG | + | chr1.3:10133895-10133914 | MS.gene86315:CDS | 35.0% | |
| AAGGATGAAGATTATCCTAC+AGG | + | chr1.3:10133836-10133855 | MS.gene86315:CDS | 35.0% | |
| AATACAGATGGGAATGATGA+AGG | + | chr1.3:10132396-10132415 | MS.gene86315:CDS | 35.0% | |
| AATCTGTTGGACGAATTGAT+CGG | + | chr1.3:10133615-10133634 | MS.gene86315:CDS | 35.0% | |
| AATGAAACTTCTGATCAGAG+AGG | + | chr1.3:10133563-10133582 | MS.gene86315:CDS | 35.0% | |
| ACTGAAATCTCTGTCCAAAA+AGG | - | chr1.3:10132487-10132506 | None:intergenic | 35.0% | |
| AGAAAGAACTTAAGGGATGA+GGG | + | chr1.3:10133968-10133987 | MS.gene86315:CDS | 35.0% | |
| AGAGAGGCAGAAATTATAAC+AGG | + | chr1.3:10133579-10133598 | MS.gene86315:CDS | 35.0% | |
| AGGTTGCTGAAAATATGAAG+GGG | + | chr1.3:10130668-10130687 | MS.gene86315:CDS | 35.0% | |
| ATACAGATGGGAATGATGAA+GGG | + | chr1.3:10132397-10132416 | MS.gene86315:CDS | 35.0% | |
| ATCAGATTCATCACTACTGT+CGG | - | chr1.3:10132691-10132710 | None:intergenic | 35.0% | |
| ATCATCCTTGTACTTTCTCT+TGG | - | chr1.3:10132601-10132620 | None:intergenic | 35.0% | |
| ATCTGATTCAGATAGCAGTA+CGG | + | chr1.3:10132623-10132642 | MS.gene86315:CDS | 35.0% | |
| ATGATGAGAAAACAGGTAGA+AGG | + | chr1.3:10132646-10132665 | MS.gene86315:CDS | 35.0% | |
| ATGGAGAAAGAAAGAGCTTA+AGG | + | chr1.3:10134140-10134159 | MS.gene86315:CDS | 35.0% | |
| ATGGGGATGATTATGAAGAA+AGG | + | chr1.3:10134056-10134075 | MS.gene86315:CDS | 35.0% | |
| ATGTTTAGATGGAGGGTTTA+GGG | + | chr1.3:10131662-10131681 | MS.gene86315:intron | 35.0% | |
| CAAAGAAAGGAAGAACTCAA+GGG | + | chr1.3:10134426-10134445 | MS.gene86315:CDS | 35.0% | |
| CAACTATAAGTAGTTTCCTG+AGG | + | chr1.3:10131637-10131656 | MS.gene86315:intron | 35.0% | |
| CAATTAGACATAGTTTCAGG+GGG | + | chr1.3:10131478-10131497 | MS.gene86315:intron | 35.0% | |
| GAAAATATGAAGGGGTTTGA+GGG | + | chr1.3:10130676-10130695 | MS.gene86315:CDS | 35.0% | |
| GAAGATAAGCTGATTGATCA+GGG | + | chr1.3:10130793-10130812 | MS.gene86315:CDS | 35.0% | |
| GAAGGTTGCTGAAAATATGA+AGG | + | chr1.3:10130666-10130685 | MS.gene86315:CDS | 35.0% | |
| GAGAGGCAGAAATTATAACA+GGG | + | chr1.3:10133580-10133599 | MS.gene86315:CDS | 35.0% | |
| GATGTTGAATCACAATCTGT+TGG | + | chr1.3:10133602-10133621 | MS.gene86315:CDS | 35.0% | |
| GCAAAGAAAGAAAGAACTCA+AGG | + | chr1.3:10134461-10134480 | MS.gene86315:CDS | 35.0% | |
| GCAATTAGACATAGTTTCAG+GGG | + | chr1.3:10131477-10131496 | MS.gene86315:intron | 35.0% | |
| GGATTATGAAACAAGAAGGA+AGG | + | chr1.3:10133646-10133665 | MS.gene86315:CDS | 35.0% | |
| GTTAGGATTGTTTGATGTGT+GGG | + | chr1.3:10130936-10130955 | MS.gene86315:intron | 35.0% | |
| TAGAGAAAGAAAGAACTCTC+TGG | + | chr1.3:10133997-10134016 | MS.gene86315:CDS | 35.0% | |
| TATGTTTAGATGGAGGGTTT+AGG | + | chr1.3:10131661-10131680 | MS.gene86315:intron | 35.0% | |
| TATTAGAGGCGGTTTATGAA+TGG | + | chr1.3:10131832-10131851 | MS.gene86315:intron | 35.0% | |
| TCATCCTTGTACTTTCTCTT+GGG | - | chr1.3:10132600-10132619 | None:intergenic | 35.0% | |
| TGAAAACGATGGATCCAATA+TGG | + | chr1.3:10130882-10130901 | MS.gene86315:CDS | 35.0% | |
| TGAAAATATGAAGGGGTTTG+AGG | + | chr1.3:10130675-10130694 | MS.gene86315:CDS | 35.0% | |
| TGAAGATAAGCTGATTGATC+AGG | + | chr1.3:10130792-10130811 | MS.gene86315:CDS | 35.0% | |
| TGCTAGAAAGGAAAAACAGA+TGG | + | chr1.3:10132326-10132345 | MS.gene86315:CDS | 35.0% | |
| TGGAGAAAGAAAGAGCTTAA+GGG | + | chr1.3:10134141-10134160 | MS.gene86315:CDS | 35.0% | |
| TGTTAGGATTGTTTGATGTG+TGG | + | chr1.3:10130935-10130954 | MS.gene86315:intron | 35.0% | |
| TTTCAGTCGGAAGAAACAAT+TGG | + | chr1.3:10132500-10132519 | MS.gene86315:CDS | 35.0% | |
| ! | ATAGAGAAGCACAAAACAGA+AGG | + | chr1.3:10134353-10134372 | MS.gene86315:CDS | 35.0% |
| ! | ATTATTGGCATCAAGGTGTT+CGG | - | chr1.3:10131059-10131078 | None:intergenic | 35.0% |
| ! | ATTCTGATAGTGATGCTAAG+AGG | + | chr1.3:10132709-10132728 | MS.gene86315:CDS | 35.0% |
| ! | ATTTTAAGCTCTGTTTGGGA+AGG | - | chr1.3:10132039-10132058 | None:intergenic | 35.0% |
| ! | CAAGAGATGGAAAGCATAAA+AGG | + | chr1.3:10133744-10133763 | MS.gene86315:CDS | 35.0% |
| ! | GAAACCTGAACATTCCTTTT+TGG | + | chr1.3:10132470-10132489 | MS.gene86315:CDS | 35.0% |
| ! | GATGATGATGATGATGATGA+TGG | + | chr1.3:10134592-10134611 | MS.gene86315:CDS | 35.0% |
| ! | GTTGTTGTGTGTGATTTTAG+AGG | + | chr1.3:10131448-10131467 | MS.gene86315:intron | 35.0% |
| ! | TAGAGAAGCACAAAACAGAA+GGG | + | chr1.3:10134354-10134373 | MS.gene86315:CDS | 35.0% |
| ! | TGATTTCTCTTCTGATAGTG+AGG | + | chr1.3:10132806-10132825 | MS.gene86315:CDS | 35.0% |
| ! | TTTCCTTTCTAGCAGCAATT+TGG | - | chr1.3:10132320-10132339 | None:intergenic | 35.0% |
| ! | TTTTGGACAGAGATTTCAGT+CGG | + | chr1.3:10132487-10132506 | MS.gene86315:CDS | 35.0% |
| !! | AGTGGTTAGTTTCATGTTAG+GGG | + | chr1.3:10131330-10131349 | MS.gene86315:intron | 35.0% |
| !! | ATGGTTATTCTAAAGCAGCT+AGG | + | chr1.3:10133525-10133544 | MS.gene86315:CDS | 35.0% |
| !! | CTAAGAATGATGGACAAGAT+AGG | + | chr1.3:10133438-10133457 | MS.gene86315:CDS | 35.0% |
| !! | GAAAAGAAGCTCTAAAGATG+GGG | + | chr1.3:10134039-10134058 | MS.gene86315:CDS | 35.0% |
| !! | GAGAAAAGAAGCTCTAAAGA+TGG | + | chr1.3:10134037-10134056 | MS.gene86315:CDS | 35.0% |
| !! | GAGAAAGAAGGCATTATAGA+AGG | + | chr1.3:10134620-10134639 | MS.gene86315:CDS | 35.0% |
| !! | GGTTAGTTTCATATTAGAGG+CGG | + | chr1.3:10131821-10131840 | MS.gene86315:intron | 35.0% |
| !! | TGGAGAAAGAAAGCACTTAA+GGG | + | chr1.3:10134318-10134337 | MS.gene86315:CDS | 35.0% |
| !! | TTGGAGAAAGAAAGCACTTA+AGG | + | chr1.3:10134317-10134336 | MS.gene86315:CDS | 35.0% |
| AAAATCGTCTTCATCCCTCA+AGG | - | chr1.3:10134299-10134318 | None:intergenic | 40.0% | |
| AACAAAGACTAGAAGGATCG+AGG | + | chr1.3:10134252-10134271 | MS.gene86315:CDS | 40.0% | |
| AACCAGTAAAGGCTAGTAAG+AGG | + | chr1.3:10132859-10132878 | MS.gene86315:CDS | 40.0% | |
| AAGAAAGAGCTTAAGGGATG+AGG | + | chr1.3:10134147-10134166 | MS.gene86315:CDS | 40.0% | |
| AAGAACTTAAGGGATGGCAA+TGG | + | chr1.3:10134079-10134098 | MS.gene86315:CDS | 40.0% | |
| AAGCACAAAACAGAAGGGAT+GGG | + | chr1.3:10134359-10134378 | MS.gene86315:CDS | 40.0% | |
| AAGCAGAAAACTAGGAGGTA+TGG | + | chr1.3:10133032-10133051 | MS.gene86315:CDS | 40.0% | |
| AAGGAGGAAATAAACGACAG+AGG | + | chr1.3:10133242-10133261 | MS.gene86315:CDS | 40.0% | |
| ACGGAGAAAGAAAGATCAGA+AGG | + | chr1.3:10133888-10133907 | MS.gene86315:CDS | 40.0% | |
| AGAAAGAGCTTAAGGGATGA+GGG | + | chr1.3:10134148-10134167 | MS.gene86315:CDS | 40.0% | |
| AGAATCCAATCCATCAACCT+TGG | - | chr1.3:10133297-10133316 | None:intergenic | 40.0% | |
| AGGAGAAAGAAAGAACTCTC+GGG | + | chr1.3:10134177-10134196 | MS.gene86315:CDS | 40.0% | |
| AGTACGGATGATGAGAAAAC+AGG | + | chr1.3:10132639-10132658 | MS.gene86315:CDS | 40.0% | |
| AGTTTCAGGGGGTAATGTTA+AGG | + | chr1.3:10131489-10131508 | MS.gene86315:intron | 40.0% | |
| ATCAGCATCAGATTCCTCTT+CGG | - | chr1.3:10132982-10133001 | None:intergenic | 40.0% | |
| ATGAGGATGATCGCAAAGAA+AGG | + | chr1.3:10134413-10134432 | MS.gene86315:CDS | 40.0% | |
| ATGATGGTCATGGAGAAAGA+AGG | + | chr1.3:10134608-10134627 | MS.gene86315:CDS | 40.0% | |
| CAAACATCATGATTCCGAAG+AGG | + | chr1.3:10132965-10132984 | MS.gene86315:CDS | 40.0% | |
| CAAACCCACAGACTAAAACT+CGG | - | chr1.3:10131793-10131812 | None:intergenic | 40.0% | |
| CGATGCTCTCTATGAATTGT+TGG | + | chr1.3:10131002-10131021 | MS.gene86315:intron | 40.0% | |
| CGATGCTCTCTATGTATTGT+TGG | + | chr1.3:10131133-10131152 | MS.gene86315:intron | 40.0% | |
| CTGTCCAAAAAGGAATGTTC+AGG | - | chr1.3:10132477-10132496 | None:intergenic | 40.0% | |
| GAAACATTGAAAGCTGCTCT+TGG | + | chr1.3:10132348-10132367 | MS.gene86315:CDS | 40.0% | |
| GAAAGAAAGAACTCTCTGGA+TGG | + | chr1.3:10134001-10134020 | MS.gene86315:CDS | 40.0% | |
| GAAAGGAAGAACTTAAGGGA+TGG | + | chr1.3:10134073-10134092 | MS.gene86315:CDS | 40.0% | |
| GACTTGAGAAGCAGAAAACT+AGG | + | chr1.3:10133024-10133043 | MS.gene86315:CDS | 40.0% | |
| GAGGAGAAAGAAAGAACTCT+CGG | + | chr1.3:10134176-10134195 | MS.gene86315:CDS | 40.0% | |
| GATAGTGAGGAAGAGAAACA+TGG | + | chr1.3:10132999-10133018 | MS.gene86315:CDS | 40.0% | |
| GATGGACAAGATAGGAAGTT+TGG | + | chr1.3:10133446-10133465 | MS.gene86315:CDS | 40.0% | |
| GATTGATCAGGGTTATACTG+AGG | + | chr1.3:10130804-10130823 | MS.gene86315:CDS | 40.0% | |
| GCAAAGAAAGGAAGAACTCA+AGG | + | chr1.3:10134425-10134444 | MS.gene86315:CDS | 40.0% | |
| GGAGATTCTGATCATCATGA+AGG | + | chr1.3:10132894-10132913 | MS.gene86315:CDS | 40.0% | |
| GGGAGGATTATGAAACAAGA+AGG | + | chr1.3:10133642-10133661 | MS.gene86315:CDS | 40.0% | |
| GTCTGTGGGTTTGAATTAAG+TGG | + | chr1.3:10131312-10131331 | MS.gene86315:intron | 40.0% | |
| GTTTCAGGGGGTAATGTTAA+GGG | + | chr1.3:10131490-10131509 | MS.gene86315:intron | 40.0% | |
| TACAGATGGGAATGATGAAG+GGG | + | chr1.3:10132398-10132417 | MS.gene86315:CDS | 40.0% | |
| TACAGGAAGAAAGACCTTGA+GGG | + | chr1.3:10134282-10134301 | MS.gene86315:CDS | 40.0% | |
| TATAGAAGGGATGATGATCG+TGG | + | chr1.3:10134634-10134653 | MS.gene86315:CDS | 40.0% | |
| TCACCAAATTGCTGCTAGAA+AGG | + | chr1.3:10132314-10132333 | MS.gene86315:CDS | 40.0% | |
| TGGACGAATTGATCGGAATA+GGG | + | chr1.3:10133622-10133641 | MS.gene86315:CDS | 40.0% | |
| TTAAGAGATGAAGATGGTCG+TGG | + | chr1.3:10133797-10133816 | MS.gene86315:CDS | 40.0% | |
| TTATACTGAGGCTGAGATTG+CGG | + | chr1.3:10130816-10130835 | MS.gene86315:CDS | 40.0% | |
| TTGAGAAGCAGAAAACTAGG+AGG | + | chr1.3:10133027-10133046 | MS.gene86315:CDS | 40.0% | |
| TTGAGGGATGAAGATGATCA+CGG | + | chr1.3:10133869-10133888 | MS.gene86315:CDS | 40.0% | |
| TTGGACGAATTGATCGGAAT+AGG | + | chr1.3:10133621-10133640 | MS.gene86315:CDS | 40.0% | |
| ! | AACTCCCAAGAGAAAGTACA+AGG | + | chr1.3:10132593-10132612 | MS.gene86315:CDS | 40.0% |
| ! | AGTAAGAGGCATGATTCAGA+TGG | + | chr1.3:10132873-10132892 | MS.gene86315:CDS | 40.0% |
| ! | AGTAGCAGTGATAGTGAAAC+TGG | + | chr1.3:10133149-10133168 | MS.gene86315:CDS | 40.0% |
| ! | CTGTCGTTTATTTCCTCCTT+TGG | - | chr1.3:10133242-10133261 | None:intergenic | 40.0% |
| ! | GTTGCTTTGAATGTACCCAT+TGG | - | chr1.3:10130620-10130639 | None:intergenic | 40.0% |
| ! | TACTGCTGGTGTTAGTAGAA+AGG | + | chr1.3:10130708-10130727 | MS.gene86315:CDS | 40.0% |
| ! | TAGAGCTTCTTTTCTCTCCA+CGG | - | chr1.3:10134033-10134052 | None:intergenic | 40.0% |
| ! | TCACTTTCGATGAGAAGTGT+GGG | + | chr1.3:10131274-10131293 | MS.gene86315:intron | 40.0% |
| ! | TGAGGGTATGTTTAGATGGA+GGG | + | chr1.3:10131655-10131674 | MS.gene86315:intron | 40.0% |
| ! | TGATAGTGATGCTAAGAGGA+AGG | + | chr1.3:10132713-10132732 | MS.gene86315:CDS | 40.0% |
| ! | TTAAGCTTTTCTTCTCCCGT+CGG | - | chr1.3:10133781-10133800 | None:intergenic | 40.0% |
| ! | TTCCTGAGGGTATGTTTAGA+TGG | + | chr1.3:10131651-10131670 | MS.gene86315:intron | 40.0% |
| ! | TTGAGGGATGAAGACGATTT+TGG | + | chr1.3:10134298-10134317 | MS.gene86315:CDS | 40.0% |
| !! | AAGAAAGCACTTAAGGGATG+AGG | + | chr1.3:10134324-10134343 | MS.gene86315:CDS | 40.0% |
| !! | AGAAAGCACTTAAGGGATGA+GGG | + | chr1.3:10134325-10134344 | MS.gene86315:CDS | 40.0% |
| !! | GATGATGATGATGATGGTCA+TGG | + | chr1.3:10134598-10134617 | MS.gene86315:CDS | 40.0% |
| !! | TACAGGAAGAAAGCACTTGA+GGG | + | chr1.3:10133853-10133872 | MS.gene86315:CDS | 40.0% |
| !! | TTGTGTGTGATTTTAGAGGC+TGG | + | chr1.3:10131452-10131471 | MS.gene86315:intron | 40.0% |
| AAGAACTTAAGGGATGAGGG+TGG | + | chr1.3:10133971-10133990 | MS.gene86315:CDS | 45.0% | |
| AAGGAAGAACTCAAGGGAAG+AGG | + | chr1.3:10134432-10134451 | MS.gene86315:CDS | 45.0% | |
| ACAGAGAGAGAAAGAGCTCA+AGG | + | chr1.3:10134497-10134516 | MS.gene86315:CDS | 45.0% | |
| ACGAATTGATCGGAATAGGG+AGG | + | chr1.3:10133625-10133644 | MS.gene86315:CDS | 45.0% | |
| AGAGGGGATGATGAGTATCA+TGG | + | chr1.3:10134550-10134569 | MS.gene86315:CDS | 45.0% | |
| AGAGGTAATGCTGCAGGAAA+AGG | + | chr1.3:10133260-10133279 | MS.gene86315:CDS | 45.0% | |
| AGCACAAAACAGAAGGGATG+GGG | + | chr1.3:10134360-10134379 | MS.gene86315:CDS | 45.0% | |
| ATAATCATCCCCATCCCTCA+AGG | - | chr1.3:10133942-10133961 | None:intergenic | 45.0% | |
| ATCACTGCTACTCTCATCAG+AGG | - | chr1.3:10133141-10133160 | None:intergenic | 45.0% | |
| CAGAGAGAGAAAGAGCTCAA+GGG | + | chr1.3:10134498-10134517 | MS.gene86315:CDS | 45.0% | |
| CAGTCGGAAGAAACAATTGG+AGG | + | chr1.3:10132503-10132522 | MS.gene86315:CDS | 45.0% | |
| CTAAAGCAGCTAGGATCAGA+GGG | + | chr1.3:10133534-10133553 | MS.gene86315:CDS | 45.0% | |
| CTCAAGTGCTTTCTTCCTGT+AGG | - | chr1.3:10133854-10133873 | None:intergenic | 45.0% | |
| CTCACTTTCGATGAGAAGTG+TGG | + | chr1.3:10131273-10131292 | MS.gene86315:intron | 45.0% | |
| CTCCATCTAAACATACCCTC+AGG | - | chr1.3:10131656-10131675 | None:intergenic | 45.0% | |
| GAAAGAAAGAACTCTCGGGA+TGG | + | chr1.3:10134181-10134200 | MS.gene86315:CDS | 45.0% | |
| GAAGCACAAAACAGAAGGGA+TGG | + | chr1.3:10134358-10134377 | MS.gene86315:CDS | 45.0% | |
| GAGGTAATGCTGCAGGAAAA+GGG | + | chr1.3:10133261-10133280 | MS.gene86315:CDS | 45.0% | |
| GGTAATGTTAAGGGCCCATT+TGG | + | chr1.3:10131499-10131518 | MS.gene86315:intron | 45.0% | |
| GTACAGGAAGAAAGACCTTG+AGG | + | chr1.3:10134281-10134300 | MS.gene86315:CDS | 45.0% | |
| TCAGCAACCTTCGAAGTTCT+CGG | - | chr1.3:10130658-10130677 | None:intergenic | 45.0% | |
| TCTAGGGATGGGGATGATTA+TGG | + | chr1.3:10134121-10134140 | MS.gene86315:CDS | 45.0% | |
| TGAAGAGGCGAGGAATAACT+TGG | + | chr1.3:10130846-10130865 | MS.gene86315:CDS | 45.0% | |
| TGATGCTAAGAGGAAGGTCA+AGG | + | chr1.3:10132719-10132738 | MS.gene86315:CDS | 45.0% | |
| TGGAGAGAAAAGGAGCTCTA+GGG | + | chr1.3:10134105-10134124 | MS.gene86315:CDS | 45.0% | |
| TGTGTCAGTGTTGTGTACAC+AGG | + | chr1.3:10131737-10131756 | MS.gene86315:intron | 45.0% | |
| TTCTTGAGCATGACCGAAAG+CGG | + | chr1.3:10130743-10130762 | MS.gene86315:CDS | 45.0% | |
| TTGAGGGATGGGGATGATTA+TGG | + | chr1.3:10133941-10133960 | MS.gene86315:CDS | 45.0% | |
| TTTAGATGGAGGGTTTAGGG+CGG | + | chr1.3:10131665-10131684 | MS.gene86315:intron | 45.0% | |
| ! | ACATCTAAGCACCGCAAGAA+AGG | + | chr1.3:10132759-10132778 | MS.gene86315:CDS | 45.0% |
| ! | AGACACAAAGTGCCACAAGA+AGG | + | chr1.3:10132566-10132585 | MS.gene86315:CDS | 45.0% |
| ! | AGTGATAGTGATCGCAGGTA+TGG | + | chr1.3:10133176-10133195 | MS.gene86315:CDS | 45.0% |
| ! | CTGAGGGTATGTTTAGATGG+AGG | + | chr1.3:10131654-10131673 | MS.gene86315:intron | 45.0% |
| ! | GACACAAAGTGCCACAAGAA+GGG | + | chr1.3:10132567-10132586 | MS.gene86315:CDS | 45.0% |
| ! | GAGGTATGGCTCTATTGATG+CGG | + | chr1.3:10133046-10133065 | MS.gene86315:CDS | 45.0% |
| ! | GGAATCTGATGCTGATAGTG+AGG | + | chr1.3:10132986-10133005 | MS.gene86315:CDS | 45.0% |
| ! | GTAGGACTAGTGAAGTGAAG+AGG | + | chr1.3:10132928-10132947 | MS.gene86315:CDS | 45.0% |
| ! | TAGAGCTCCTTTTCTCTCCA+CGG | - | chr1.3:10134105-10134124 | None:intergenic | 45.0% |
| ! | TCTAAAGCAGCTAGGATCAG+AGG | + | chr1.3:10133533-10133552 | MS.gene86315:CDS | 45.0% |
| ! | TGGAAAGCATAAAAGGGACG+AGG | + | chr1.3:10133751-10133770 | MS.gene86315:CDS | 45.0% |
| ! | TGGAGAAAGGAAGCACAGAA+GGG | + | chr1.3:10134654-10134673 | MS.gene86315:CDS | 45.0% |
| ! | TTTTTGTCAGAAGAGTCCCG+TGG | - | chr1.3:10131377-10131396 | None:intergenic | 45.0% |
| !! | AGAAAAGGAGCTCTAGGGAT+GGG | + | chr1.3:10134110-10134129 | MS.gene86315:CDS | 45.0% |
| !! | CTACAGGAAGAAAGCACTTG+AGG | + | chr1.3:10133852-10133871 | MS.gene86315:CDS | 45.0% |
| !! | GCTACCGAGTTTTAGTCTGT+GGG | + | chr1.3:10131786-10131805 | MS.gene86315:intron | 45.0% |
| !! | GGTTAGTTTCATGTTAGGGG+CGG | + | chr1.3:10131333-10131352 | MS.gene86315:intron | 45.0% |
| !! | TAGTGCCAAGGTTGATGGAT+TGG | + | chr1.3:10133289-10133308 | MS.gene86315:CDS | 45.0% |
| !! | TGCCTCTTACTAGCCTTTAC+TGG | - | chr1.3:10132864-10132883 | None:intergenic | 45.0% |
| !! | TGCTACCGAGTTTTAGTCTG+TGG | + | chr1.3:10131785-10131804 | MS.gene86315:intron | 45.0% |
| !!! | TAATTTTCTTAAATTATTAT+TGG | - | chr1.3:10131074-10131093 | None:intergenic | 5.0% |
| AACGACAGAGGTAATGCTGC+AGG | + | chr1.3:10133254-10133273 | MS.gene86315:CDS | 50.0% | |
| AAGAACTCTCGGGATGGTGA+TGG | + | chr1.3:10134187-10134206 | MS.gene86315:CDS | 50.0% | |
| AAGAGCTTAAGGGATGAGGG+TGG | + | chr1.3:10134151-10134170 | MS.gene86315:CDS | 50.0% | |
| AAGATGGTCGTGGAGAGAGA+AGG | + | chr1.3:10133807-10133826 | MS.gene86315:CDS | 50.0% | |
| AAGGAAGACCTTGAGGGATG+GGG | + | chr1.3:10133931-10133950 | MS.gene86315:CDS | 50.0% | |
| AAGGGATGAGGATGTTCGTG+GGG | + | chr1.3:10134516-10134535 | MS.gene86315:CDS | 50.0% | |
| AAGGGGTTTGAGGGAGATCA+AGG | + | chr1.3:10130685-10130704 | MS.gene86315:CDS | 50.0% | |
| ACTCTGGTAGAGGCAGTGTT+AGG | + | chr1.3:10133069-10133088 | MS.gene86315:CDS | 50.0% | |
| ACTTCACTAGTCCTACGCCT+GGG | - | chr1.3:10132924-10132943 | None:intergenic | 50.0% | |
| AGAGGCGAGGAATAACTTGG+AGG | + | chr1.3:10130849-10130868 | MS.gene86315:CDS | 50.0% | |
| AGCGAAGAGAAGTGAGCCAA+AGG | + | chr1.3:10133223-10133242 | MS.gene86315:CDS | 50.0% | |
| AGGATCGAGGATGATCGTAC+AGG | + | chr1.3:10134265-10134284 | MS.gene86315:CDS | 50.0% | |
| AGGATTGAGGATGAACGTGC+AGG | + | chr1.3:10133908-10133927 | MS.gene86315:CDS | 50.0% | |
| ATCGGGTTACAAACCCCAAG+AGG | + | chr1.3:10130586-10130605 | MS.gene86315:CDS | 50.0% | |
| ATGAAGGGGCTGGAAACGAA+GGG | + | chr1.3:10132412-10132431 | MS.gene86315:CDS | 50.0% | |
| ATTGATGCGGACTCTGGTAG+AGG | + | chr1.3:10133059-10133078 | MS.gene86315:CDS | 50.0% | |
| ATTGGTACCAGACCCTCTTG+GGG | - | chr1.3:10130602-10130621 | None:intergenic | 50.0% | |
| CAAAACAGAAGGGATGGGGA+TGG | + | chr1.3:10134364-10134383 | MS.gene86315:CDS | 50.0% | |
| CAAGAGGGTCTGGTACCAAT+GGG | + | chr1.3:10130602-10130621 | MS.gene86315:CDS | 50.0% | |
| CAAGGGATGAGGATGTTCGT+GGG | + | chr1.3:10134515-10134534 | MS.gene86315:CDS | 50.0% | |
| CATTGGTACCAGACCCTCTT+GGG | - | chr1.3:10130603-10130622 | None:intergenic | 50.0% | |
| GAAGAGAAGTGAGCCAAAGG+AGG | + | chr1.3:10133226-10133245 | MS.gene86315:CDS | 50.0% | |
| GAAGGAAGACCTTGAGGGAT+GGG | + | chr1.3:10133930-10133949 | MS.gene86315:CDS | 50.0% | |
| GAGAAAGAGCTCAAGGGATG+AGG | + | chr1.3:10134504-10134523 | MS.gene86315:CDS | 50.0% | |
| GATTGCGGAGAAGCTTGAAG+AGG | + | chr1.3:10130831-10130850 | MS.gene86315:CDS | 50.0% | |
| GCTGCAGCTGATGAAAACGA+TGG | + | chr1.3:10130871-10130890 | MS.gene86315:CDS | 50.0% | |
| GGGATGATGATCGTGGAGAA+AGG | + | chr1.3:10134641-10134660 | MS.gene86315:CDS | 50.0% | |
| GTGGAGAGAAAAGGAGCTCT+AGG | + | chr1.3:10134104-10134123 | MS.gene86315:CDS | 50.0% | |
| TCAAGGGATGAGGATGTTCG+TGG | + | chr1.3:10134514-10134533 | MS.gene86315:CDS | 50.0% | |
| TCGCCTTCGATGTGAAGTGT+GGG | + | chr1.3:10131762-10131781 | MS.gene86315:intron | 50.0% | |
| TCGGGTTACAAACCCCAAGA+GGG | + | chr1.3:10130587-10130606 | MS.gene86315:CDS | 50.0% | |
| TGCAGGAAGGAAGACCTTGA+GGG | + | chr1.3:10133925-10133944 | MS.gene86315:CDS | 50.0% | |
| TTACAAACCCCAAGAGGGTC+TGG | + | chr1.3:10130592-10130611 | MS.gene86315:CDS | 50.0% | |
| TTGAGGATGAACGTGCAGGA+AGG | + | chr1.3:10133912-10133931 | MS.gene86315:CDS | 50.0% | |
| ! | AAGGAAGCACAGAAGGGAGT+AGG | + | chr1.3:10134660-10134679 | MS.gene86315:CDS | 50.0% |
| ! | ACAAAGTGCCACAAGAAGGG+TGG | + | chr1.3:10132570-10132589 | MS.gene86315:CDS | 50.0% |
| ! | GCGGCAGAGTTTTTGTCTGT+GGG | + | chr1.3:10131298-10131317 | MS.gene86315:intron | 50.0% |
| ! | GTGGAGAAAGGAAGCACAGA+AGG | + | chr1.3:10134653-10134672 | MS.gene86315:CDS | 50.0% |
| ! | GTGGGGAAAGAAAGCACAGA+GGG | + | chr1.3:10134533-10134552 | MS.gene86315:CDS | 50.0% |
| ! | TAAGCACCGCAAGAAAGGCA+GGG | + | chr1.3:10132764-10132783 | MS.gene86315:CDS | 50.0% |
| ! | TGCGGCAGAGTTTTTGTCTG+TGG | + | chr1.3:10131297-10131316 | MS.gene86315:intron | 50.0% |
| ! | TGGAGAGAGAAGGCATGGAA+AGG | + | chr1.3:10133817-10133836 | MS.gene86315:CDS | 50.0% |
| ! | TGGGGAAAGAAAGCACAGAG+GGG | + | chr1.3:10134534-10134553 | MS.gene86315:CDS | 50.0% |
| ! | TTAGATGGAGGGTTTAGGGC+GGG | + | chr1.3:10131666-10131685 | MS.gene86315:intron | 50.0% |
| ! | TTCGATGAGAAGTGTGGGTG+CGG | + | chr1.3:10131279-10131298 | MS.gene86315:intron | 50.0% |
| !! | AGAGAAGAGCTCTAGGGATG+TGG | + | chr1.3:10134216-10134235 | MS.gene86315:CDS | 50.0% |
| !! | GAAAAGGAGCTCTAGGGATG+GGG | + | chr1.3:10134111-10134130 | MS.gene86315:CDS | 50.0% |
| !! | GAGAAAAGGAGCTCTAGGGA+TGG | + | chr1.3:10134109-10134128 | MS.gene86315:CDS | 50.0% |
| !! | GAGAAGAGCTCTAGGGATGT+GGG | + | chr1.3:10134217-10134236 | MS.gene86315:CDS | 50.0% |
| !! | TCAGCTGAATCTGCCGCTTT+CGG | - | chr1.3:10130759-10130778 | None:intergenic | 50.0% |
| AAAGGGACGAGGAAGACCGA+CGG | + | chr1.3:10133762-10133781 | MS.gene86315:CDS | 55.0% | |
| CACTTCACTAGTCCTACGCC+TGG | - | chr1.3:10132925-10132944 | None:intergenic | 55.0% | |
| CATCCACCCTGCCTTTCTTG+CGG | - | chr1.3:10132773-10132792 | None:intergenic | 55.0% | |
| CCAAGAGGGTCTGGTACCAA+TGG | + | chr1.3:10130601-10130620 | MS.gene86315:CDS | 55.0% | |
| CCATTGGTACCAGACCCTCT+TGG | - | chr1.3:10130604-10130623 | None:intergenic | 55.0% | |
| CCCTAGAGCTCTTCTCTCCT+CGG | - | chr1.3:10134213-10134232 | None:intergenic | 55.0% | |
| CCGAGGAGAGAAGAGCTCTA+GGG | + | chr1.3:10134210-10134229 | MS.gene86315:CDS | 55.0% | |
| CGTGAAGCCGAGAACTTCGA+AGG | + | chr1.3:10130648-10130667 | MS.gene86315:CDS | 55.0% | |
| CTCGCCTTCGATGTGAAGTG+TGG | + | chr1.3:10131761-10131780 | MS.gene86315:intron | 55.0% | |
| GATGAAGGGGCTGGAAACGA+AGG | + | chr1.3:10132411-10132430 | MS.gene86315:CDS | 55.0% | |
| GATGGGAATGATGAAGGGGC+TGG | + | chr1.3:10132402-10132421 | MS.gene86315:CDS | 55.0% | |
| GCAATGGCCGTGGAGAGAAA+AGG | + | chr1.3:10134095-10134114 | MS.gene86315:CDS | 55.0% | |
| GCACCCACACTTCACATCGA+AGG | - | chr1.3:10131768-10131787 | None:intergenic | 55.0% | |
| GGAAGGAAGACCTTGAGGGA+TGG | + | chr1.3:10133929-10133948 | MS.gene86315:CDS | 55.0% | |
| GGCAGTGTTAGGCATGCTTC+AGG | + | chr1.3:10133080-10133099 | MS.gene86315:CDS | 55.0% | |
| GGCTCTATTGATGCGGACTC+TGG | + | chr1.3:10133053-10133072 | MS.gene86315:CDS | 55.0% | |
| GTGCAGGAAGGAAGACCTTG+AGG | + | chr1.3:10133924-10133943 | MS.gene86315:CDS | 55.0% | |
| TCTCTGGATGGCAATGTCCG+TGG | + | chr1.3:10134013-10134032 | MS.gene86315:CDS | 55.0% | |
| TGGGAGTTCCACCCTTCTTG+TGG | - | chr1.3:10132581-10132600 | None:intergenic | 55.0% | |
| TTAAGGGATGAGGGTGGCAG+AGG | + | chr1.3:10133977-10133996 | MS.gene86315:CDS | 55.0% | |
| TTAAGGGATGGCAATGGCCG+TGG | + | chr1.3:10134085-10134104 | MS.gene86315:CDS | 55.0% | |
| ! | ATCATCATGAAGGCGTGCCC+AGG | + | chr1.3:10132904-10132923 | MS.gene86315:CDS | 55.0% |
| ! | CGTGGGGAAAGAAAGCACAG+AGG | + | chr1.3:10134532-10134551 | MS.gene86315:CDS | 55.0% |
| ! | CTAAGCACCGCAAGAAAGGC+AGG | + | chr1.3:10132763-10132782 | MS.gene86315:CDS | 55.0% |
| ! | GCAGCAGTGATAGTGATCGC+AGG | + | chr1.3:10133171-10133190 | MS.gene86315:CDS | 55.0% |
| !! | GAGGGAGATCAAGGTACTGC+TGG | + | chr1.3:10130694-10130713 | MS.gene86315:CDS | 55.0% |
| AAGGGACGAGGAAGACCGAC+GGG | + | chr1.3:10133763-10133782 | MS.gene86315:CDS | 60.0% | |
| CGGAGAAGCTTGAAGAGGCG+AGG | + | chr1.3:10130836-10130855 | MS.gene86315:CDS | 60.0% | |
| GCCGAGGAGAGAAGAGCTCT+AGG | + | chr1.3:10134209-10134228 | MS.gene86315:CDS | 60.0% | |
| GGTCGTGGAGAGAGAAGGCA+TGG | + | chr1.3:10133812-10133831 | MS.gene86315:CDS | 60.0% | |
| ! | ATGGAGGGTTTAGGGCGGGA+TGG | + | chr1.3:10131670-10131689 | MS.gene86315:intron | 60.0% |
| GCACCGCAAGAAAGGCAGGG+TGG | + | chr1.3:10132767-10132786 | MS.gene86315:CDS | 65.0% | |
| ! | ATGAAGGCGTGCCCAGGCGT+AGG | + | chr1.3:10132910-10132929 | MS.gene86315:CDS | 65.0% |
| !! | TCTCGGGATGGTGATGGCCG+AGG | + | chr1.3:10134193-10134212 | MS.gene86315:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 10130574 | 10134681 | 10130574 | ID=MS.gene86315 |
| chr1.3 | mRNA | 10130574 | 10134681 | 10130574 | ID=MS.gene86315.t1;Parent=MS.gene86315 |
| chr1.3 | exon | 10130574 | 10130908 | 10130574 | ID=MS.gene86315.t1.exon1;Parent=MS.gene86315.t1 |
| chr1.3 | CDS | 10130574 | 10130908 | 10130574 | ID=cds.MS.gene86315.t1;Parent=MS.gene86315.t1 |
| chr1.3 | exon | 10132296 | 10134681 | 10132296 | ID=MS.gene86315.t1.exon2;Parent=MS.gene86315.t1 |
| chr1.3 | CDS | 10132296 | 10134681 | 10132296 | ID=cds.MS.gene86315.t1;Parent=MS.gene86315.t1 |
| Gene Sequence |
| Protein sequence |
