Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88960.t1 | XP_003589529.1 | 96.7 | 306 | 10 | 0 | 1 | 306 | 46 | 351 | 3.10E-174 | 620.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88960.t1 | Q94CH6 | 52.1 | 303 | 143 | 2 | 1 | 302 | 52 | 353 | 3.6e-94 | 346.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88960.t1 | G7I7S8 | 96.7 | 306 | 10 | 0 | 1 | 306 | 46 | 351 | 2.2e-174 | 620.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene88960 | 0.805271 | 1.45E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene88960 | 0.823397 | 1.42E-53 | -1.69E-46 |
| MS.gene049382 | MS.gene88960 | 0.80525 | 1.46E-49 | -1.69E-46 |
| MS.gene049695 | MS.gene88960 | 0.811147 | 8.10E-51 | -1.69E-46 |
| MS.gene050020 | MS.gene88960 | 0.843083 | 1.74E-58 | -1.69E-46 |
| MS.gene050139 | MS.gene88960 | 0.802689 | 4.98E-49 | -1.69E-46 |
| MS.gene050330 | MS.gene88960 | -0.820618 | 6.24E-53 | -1.69E-46 |
| MS.gene050438 | MS.gene88960 | 0.813288 | 2.76E-51 | -1.69E-46 |
| MS.gene050584 | MS.gene88960 | 0.804545 | 2.05E-49 | -1.69E-46 |
| MS.gene050586 | MS.gene88960 | 0.822883 | 1.87E-53 | -1.69E-46 |
| MS.gene050807 | MS.gene88960 | 0.855745 | 5.13E-62 | -1.69E-46 |
| MS.gene050808 | MS.gene88960 | 0.82245 | 2.35E-53 | -1.69E-46 |
| MS.gene050815 | MS.gene88960 | 0.806015 | 1.01E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene88960 | 0.854062 | 1.58E-61 | -1.69E-46 |
| MS.gene051789 | MS.gene88960 | 0.872798 | 2.41E-67 | -1.69E-46 |
| MS.gene052286 | MS.gene88960 | 0.804487 | 2.11E-49 | -1.69E-46 |
| MS.gene052302 | MS.gene88960 | 0.833308 | 5.75E-56 | -1.69E-46 |
| MS.gene052376 | MS.gene88960 | 0.836082 | 1.15E-56 | -1.69E-46 |
| MS.gene052665 | MS.gene88960 | 0.823897 | 1.08E-53 | -1.69E-46 |
| MS.gene053074 | MS.gene88960 | 0.870474 | 1.42E-66 | -1.69E-46 |
| MS.gene053184 | MS.gene88960 | 0.809 | 2.35E-50 | -1.69E-46 |
| MS.gene053563 | MS.gene88960 | 0.818238 | 2.18E-52 | -1.69E-46 |
| MS.gene053630 | MS.gene88960 | 0.845167 | 4.81E-59 | -1.69E-46 |
| MS.gene053836 | MS.gene88960 | 0.802075 | 6.66E-49 | -1.69E-46 |
| MS.gene054184 | MS.gene88960 | 0.828748 | 7.56E-55 | -1.69E-46 |
| MS.gene054185 | MS.gene88960 | 0.837826 | 4.13E-57 | -1.69E-46 |
| MS.gene054473 | MS.gene88960 | 0.807807 | 4.22E-50 | -1.69E-46 |
| MS.gene05456 | MS.gene88960 | 0.829098 | 6.23E-55 | -1.69E-46 |
| MS.gene054596 | MS.gene88960 | 0.808068 | 3.71E-50 | -1.69E-46 |
| MS.gene054667 | MS.gene88960 | 0.811085 | 8.35E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene88960 | 0.824829 | 6.53E-54 | -1.69E-46 |
| MS.gene055358 | MS.gene88960 | 0.826089 | 3.28E-54 | -1.69E-46 |
| MS.gene056069 | MS.gene88960 | -0.825193 | 5.36E-54 | -1.69E-46 |
| MS.gene056643 | MS.gene88960 | 0.805982 | 1.03E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene88960 | 0.823076 | 1.68E-53 | -1.69E-46 |
| MS.gene057260 | MS.gene88960 | 0.805357 | 1.39E-49 | -1.69E-46 |
| MS.gene057395 | MS.gene88960 | 0.804026 | 2.63E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene88960 | 0.816134 | 6.47E-52 | -1.69E-46 |
| MS.gene058168 | MS.gene88960 | 0.841424 | 4.79E-58 | -1.69E-46 |
| MS.gene058236 | MS.gene88960 | 0.801406 | 9.14E-49 | -1.69E-46 |
| MS.gene058833 | MS.gene88960 | 0.800723 | 1.26E-48 | -1.69E-46 |
| MS.gene059006 | MS.gene88960 | 0.86725 | 1.57E-65 | -1.69E-46 |
| MS.gene059124 | MS.gene88960 | 0.815656 | 8.26E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene88960 | 0.841552 | 4.43E-58 | -1.69E-46 |
| MS.gene061113 | MS.gene88960 | 0.80279 | 4.75E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88960.t1 | MTR_1g025720 | 96.732 | 306 | 10 | 0 | 1 | 306 | 46 | 351 | 0.0 | 617 |
| MS.gene88960.t1 | MTR_1g025700 | 78.808 | 302 | 64 | 0 | 1 | 302 | 59 | 360 | 0.0 | 520 |
| MS.gene88960.t1 | MTR_1g025680 | 70.957 | 303 | 87 | 1 | 1 | 302 | 43 | 345 | 1.10e-163 | 463 |
| MS.gene88960.t1 | MTR_3g114090 | 67.219 | 302 | 98 | 1 | 1 | 301 | 45 | 346 | 1.91e-153 | 434 |
| MS.gene88960.t1 | MTR_1g025760 | 66.777 | 301 | 99 | 1 | 2 | 301 | 90 | 390 | 1.41e-151 | 431 |
| MS.gene88960.t1 | MTR_1g025780 | 63.787 | 301 | 108 | 1 | 1 | 301 | 50 | 349 | 1.98e-151 | 429 |
| MS.gene88960.t1 | MTR_3g114120 | 61.639 | 305 | 117 | 0 | 1 | 305 | 56 | 360 | 1.91e-146 | 416 |
| MS.gene88960.t1 | MTR_5g022630 | 54.754 | 305 | 135 | 3 | 1 | 302 | 52 | 356 | 1.14e-118 | 346 |
| MS.gene88960.t1 | MTR_5g022640 | 50.814 | 307 | 149 | 2 | 1 | 305 | 52 | 358 | 1.03e-113 | 333 |
| MS.gene88960.t1 | MTR_8g075230 | 50.654 | 306 | 150 | 1 | 1 | 305 | 45 | 350 | 1.38e-113 | 332 |
| MS.gene88960.t1 | MTR_8g075200 | 49.511 | 307 | 154 | 1 | 1 | 306 | 50 | 356 | 2.26e-105 | 313 |
| MS.gene88960.t1 | MTR_8g075220 | 49.511 | 307 | 149 | 3 | 1 | 301 | 49 | 355 | 1.00e-104 | 310 |
| MS.gene88960.t1 | MTR_5g084750 | 41.447 | 304 | 177 | 1 | 1 | 303 | 39 | 342 | 4.04e-85 | 259 |
| MS.gene88960.t1 | MTR_1g025910 | 42.484 | 306 | 173 | 3 | 2 | 306 | 46 | 349 | 4.85e-85 | 260 |
| MS.gene88960.t1 | MTR_5g074270 | 41.503 | 306 | 176 | 2 | 1 | 303 | 42 | 347 | 1.48e-83 | 256 |
| MS.gene88960.t1 | MTR_4g087985 | 39.610 | 308 | 178 | 2 | 1 | 300 | 45 | 352 | 8.96e-82 | 251 |
| MS.gene88960.t1 | MTR_5g084770 | 41.176 | 306 | 176 | 3 | 1 | 303 | 37 | 341 | 1.02e-81 | 251 |
| MS.gene88960.t1 | MTR_4g056280 | 41.722 | 302 | 175 | 1 | 1 | 301 | 39 | 340 | 2.23e-80 | 248 |
| MS.gene88960.t1 | MTR_3g082830 | 39.806 | 309 | 181 | 3 | 1 | 306 | 47 | 353 | 4.62e-80 | 247 |
| MS.gene88960.t1 | MTR_3g464730 | 39.286 | 308 | 185 | 2 | 1 | 306 | 37 | 344 | 5.24e-80 | 246 |
| MS.gene88960.t1 | MTR_8g014910 | 40.264 | 303 | 179 | 2 | 1 | 301 | 41 | 343 | 5.21e-78 | 241 |
| MS.gene88960.t1 | MTR_2g084585 | 39.735 | 302 | 181 | 1 | 1 | 301 | 39 | 340 | 4.29e-77 | 239 |
| MS.gene88960.t1 | MTR_5g084790 | 39.145 | 304 | 184 | 1 | 1 | 303 | 41 | 344 | 6.34e-77 | 239 |
| MS.gene88960.t1 | MTR_2g100620 | 38.944 | 303 | 183 | 2 | 1 | 301 | 40 | 342 | 4.70e-76 | 236 |
| MS.gene88960.t1 | MTR_2g015080 | 38.065 | 310 | 182 | 4 | 1 | 300 | 47 | 356 | 7.41e-76 | 236 |
| MS.gene88960.t1 | MTR_4g056160 | 38.511 | 309 | 180 | 4 | 1 | 302 | 36 | 341 | 2.33e-69 | 219 |
| MS.gene88960.t1 | MTR_5g083040 | 36.943 | 314 | 188 | 4 | 1 | 306 | 41 | 352 | 6.90e-69 | 218 |
| MS.gene88960.t1 | MTR_8g087890 | 37.458 | 299 | 179 | 5 | 1 | 295 | 40 | 334 | 4.94e-61 | 198 |
| MS.gene88960.t1 | MTR_0565s0010 | 35.786 | 299 | 185 | 5 | 1 | 295 | 41 | 336 | 1.75e-59 | 194 |
| MS.gene88960.t1 | MTR_5g009100 | 33.882 | 304 | 198 | 3 | 1 | 302 | 55 | 357 | 1.65e-58 | 192 |
| MS.gene88960.t1 | MTR_8g079050 | 35.350 | 314 | 192 | 7 | 1 | 305 | 46 | 357 | 8.04e-58 | 190 |
| MS.gene88960.t1 | MTR_6g034400 | 70.732 | 123 | 36 | 0 | 44 | 166 | 3 | 125 | 2.23e-56 | 179 |
| MS.gene88960.t1 | MTR_1g069175 | 35.410 | 305 | 192 | 4 | 1 | 301 | 42 | 345 | 2.71e-56 | 186 |
| MS.gene88960.t1 | MTR_3g024510 | 34.653 | 303 | 192 | 5 | 1 | 300 | 47 | 346 | 7.44e-56 | 185 |
| MS.gene88960.t1 | MTR_5g078210 | 35.314 | 303 | 189 | 6 | 2 | 301 | 35 | 333 | 2.91e-53 | 178 |
| MS.gene88960.t1 | MTR_4g035353 | 35.452 | 299 | 188 | 4 | 1 | 296 | 40 | 336 | 3.02e-53 | 178 |
| MS.gene88960.t1 | MTR_3g098270 | 34.528 | 307 | 195 | 4 | 1 | 302 | 43 | 348 | 3.03e-53 | 179 |
| MS.gene88960.t1 | MTR_7g116570 | 33.553 | 304 | 197 | 4 | 1 | 301 | 43 | 344 | 4.78e-53 | 178 |
| MS.gene88960.t1 | MTR_7g116520 | 34.528 | 307 | 190 | 5 | 1 | 301 | 43 | 344 | 5.87e-53 | 177 |
| MS.gene88960.t1 | MTR_3g005650 | 35.570 | 298 | 184 | 6 | 1 | 296 | 39 | 330 | 6.30e-53 | 177 |
| MS.gene88960.t1 | MTR_3g005660 | 33.866 | 313 | 193 | 8 | 1 | 304 | 45 | 352 | 1.59e-52 | 176 |
| MS.gene88960.t1 | MTR_6g021530 | 35.082 | 305 | 192 | 5 | 1 | 301 | 38 | 340 | 2.38e-52 | 176 |
| MS.gene88960.t1 | MTR_1g079540 | 33.333 | 303 | 197 | 4 | 2 | 301 | 41 | 341 | 2.55e-52 | 176 |
| MS.gene88960.t1 | MTR_1g079530 | 34.868 | 304 | 187 | 5 | 1 | 301 | 38 | 333 | 5.44e-52 | 175 |
| MS.gene88960.t1 | MTR_7g116510 | 33.981 | 309 | 200 | 3 | 1 | 306 | 34 | 341 | 1.17e-51 | 174 |
| MS.gene88960.t1 | MTR_4g108690 | 32.362 | 309 | 202 | 6 | 2 | 306 | 37 | 342 | 3.81e-51 | 173 |
| MS.gene88960.t1 | MTR_4g019880 | 33.007 | 306 | 198 | 5 | 1 | 301 | 41 | 344 | 4.46e-50 | 170 |
| MS.gene88960.t1 | MTR_3g435540 | 32.362 | 309 | 202 | 6 | 2 | 306 | 33 | 338 | 5.21e-50 | 170 |
| MS.gene88960.t1 | MTR_1108s0010 | 39.048 | 210 | 116 | 2 | 95 | 303 | 3 | 201 | 1.89e-48 | 161 |
| MS.gene88960.t1 | MTR_7g116500 | 32.566 | 304 | 200 | 4 | 1 | 301 | 42 | 343 | 2.01e-48 | 166 |
| MS.gene88960.t1 | MTR_1g024890 | 33.333 | 303 | 197 | 4 | 2 | 301 | 42 | 342 | 2.53e-48 | 165 |
| MS.gene88960.t1 | MTR_2g033920 | 34.098 | 305 | 193 | 5 | 1 | 300 | 44 | 345 | 2.94e-48 | 165 |
| MS.gene88960.t1 | MTR_3g052480 | 33.657 | 309 | 193 | 6 | 1 | 301 | 42 | 346 | 1.52e-47 | 163 |
| MS.gene88960.t1 | MTR_2g033930 | 33.333 | 300 | 192 | 6 | 1 | 296 | 41 | 336 | 1.78e-47 | 163 |
| MS.gene88960.t1 | MTR_4g122200 | 33.226 | 310 | 198 | 7 | 1 | 305 | 44 | 349 | 2.81e-47 | 162 |
| MS.gene88960.t1 | MTR_8g087870 | 31.229 | 301 | 191 | 7 | 2 | 299 | 39 | 326 | 2.36e-44 | 154 |
| MS.gene88960.t1 | MTR_3g052490 | 32.792 | 308 | 196 | 5 | 1 | 301 | 41 | 344 | 8.61e-44 | 153 |
| MS.gene88960.t1 | MTR_2g017875 | 30.844 | 308 | 197 | 7 | 2 | 304 | 44 | 340 | 6.70e-43 | 151 |
| MS.gene88960.t1 | MTR_2g017955 | 33.000 | 300 | 183 | 10 | 2 | 295 | 43 | 330 | 1.24e-42 | 150 |
| MS.gene88960.t1 | MTR_3g023220 | 31.788 | 302 | 186 | 9 | 2 | 299 | 43 | 328 | 1.72e-42 | 150 |
| MS.gene88960.t1 | MTR_7g008060 | 29.316 | 307 | 193 | 6 | 1 | 301 | 42 | 330 | 9.59e-42 | 148 |
| MS.gene88960.t1 | MTR_2g017965 | 33.007 | 306 | 189 | 11 | 2 | 302 | 43 | 337 | 1.82e-41 | 147 |
| MS.gene88960.t1 | MTR_2g017925 | 33.779 | 299 | 178 | 10 | 2 | 295 | 43 | 326 | 3.89e-41 | 147 |
| MS.gene88960.t1 | MTR_2g044100 | 30.844 | 308 | 196 | 7 | 1 | 298 | 52 | 352 | 8.07e-39 | 141 |
| MS.gene88960.t1 | MTR_3g052580 | 32.258 | 310 | 194 | 7 | 1 | 301 | 37 | 339 | 8.31e-39 | 141 |
| MS.gene88960.t1 | MTR_3g052580 | 32.258 | 310 | 194 | 7 | 1 | 301 | 36 | 338 | 1.02e-38 | 141 |
| MS.gene88960.t1 | MTR_5g093090 | 31.392 | 309 | 199 | 6 | 1 | 301 | 37 | 340 | 1.89e-38 | 139 |
| MS.gene88960.t1 | MTR_8g022810 | 29.582 | 311 | 203 | 8 | 1 | 302 | 50 | 353 | 2.40e-38 | 139 |
| MS.gene88960.t1 | MTR_8g074570 | 28.387 | 310 | 203 | 6 | 1 | 299 | 47 | 348 | 2.69e-38 | 139 |
| MS.gene88960.t1 | MTR_8g031390 | 29.524 | 315 | 194 | 9 | 1 | 303 | 46 | 344 | 2.77e-38 | 139 |
| MS.gene88960.t1 | MTR_5g078210 | 32.180 | 289 | 182 | 7 | 2 | 286 | 35 | 313 | 3.09e-38 | 138 |
| MS.gene88960.t1 | MTR_8g031420 | 29.355 | 310 | 200 | 8 | 2 | 303 | 45 | 343 | 1.89e-37 | 137 |
| MS.gene88960.t1 | MTR_8g031430 | 29.808 | 312 | 196 | 11 | 2 | 303 | 47 | 345 | 1.05e-36 | 135 |
| MS.gene88960.t1 | MTR_5g074210 | 41.429 | 140 | 81 | 1 | 165 | 303 | 64 | 203 | 4.43e-36 | 129 |
| MS.gene88960.t1 | MTR_0009s0250 | 30.844 | 308 | 185 | 12 | 1 | 299 | 42 | 330 | 1.37e-35 | 131 |
| MS.gene88960.t1 | MTR_2g017915 | 31.373 | 306 | 173 | 9 | 2 | 302 | 43 | 316 | 2.24e-35 | 131 |
| MS.gene88960.t1 | MTR_8g031400 | 29.642 | 307 | 197 | 8 | 2 | 300 | 47 | 342 | 2.79e-35 | 131 |
| MS.gene88960.t1 | MTR_8g022790 | 30.537 | 298 | 190 | 8 | 2 | 294 | 47 | 332 | 1.13e-34 | 129 |
| MS.gene88960.t1 | MTR_2g033920 | 34.118 | 255 | 161 | 4 | 1 | 251 | 44 | 295 | 2.02e-34 | 127 |
| MS.gene88960.t1 | MTR_8g031390 | 29.137 | 278 | 174 | 8 | 1 | 271 | 46 | 307 | 2.15e-31 | 119 |
| MS.gene88960.t1 | MTR_2g461580 | 28.852 | 305 | 194 | 8 | 1 | 299 | 40 | 327 | 8.22e-31 | 119 |
| MS.gene88960.t1 | MTR_8g074580 | 26.462 | 359 | 190 | 11 | 2 | 301 | 54 | 397 | 1.94e-30 | 119 |
| MS.gene88960.t1 | MTR_3g021460 | 29.836 | 305 | 191 | 10 | 1 | 299 | 40 | 327 | 1.47e-28 | 112 |
| MS.gene88960.t1 | MTR_8g074560 | 30.699 | 329 | 183 | 13 | 2 | 305 | 41 | 349 | 2.74e-28 | 112 |
| MS.gene88960.t1 | MTR_2g015630 | 28.483 | 323 | 200 | 12 | 2 | 301 | 41 | 355 | 9.21e-28 | 111 |
| MS.gene88960.t1 | MTR_1g030268 | 29.677 | 310 | 179 | 12 | 19 | 300 | 64 | 362 | 8.65e-27 | 108 |
| MS.gene88960.t1 | MTR_6g049230 | 40.496 | 121 | 71 | 1 | 167 | 286 | 74 | 194 | 1.24e-26 | 103 |
| MS.gene88960.t1 | MTR_5g087690 | 29.348 | 276 | 183 | 6 | 34 | 301 | 83 | 354 | 1.86e-26 | 107 |
| MS.gene88960.t1 | MTR_1g030275 | 28.889 | 315 | 185 | 12 | 19 | 305 | 63 | 366 | 2.36e-26 | 107 |
| MS.gene88960.t1 | MTR_3g463930 | 28.701 | 331 | 195 | 12 | 2 | 301 | 54 | 374 | 6.92e-26 | 106 |
| MS.gene88960.t1 | MTR_7g087190 | 27.010 | 311 | 188 | 12 | 19 | 298 | 67 | 369 | 7.13e-26 | 106 |
| MS.gene88960.t1 | MTR_4g036375 | 35.461 | 141 | 91 | 0 | 1 | 141 | 39 | 179 | 1.13e-25 | 101 |
| MS.gene88960.t1 | MTR_7g113860 | 26.452 | 310 | 187 | 11 | 17 | 296 | 52 | 350 | 1.15e-25 | 105 |
| MS.gene88960.t1 | MTR_1g079590 | 33.721 | 172 | 110 | 3 | 2 | 170 | 41 | 211 | 2.97e-25 | 100 |
| MS.gene88960.t1 | MTR_7g113860 | 26.537 | 309 | 186 | 11 | 18 | 296 | 59 | 356 | 3.21e-25 | 104 |
| MS.gene88960.t1 | MTR_3g069780 | 28.213 | 319 | 196 | 11 | 2 | 298 | 40 | 347 | 4.37e-25 | 103 |
| MS.gene88960.t1 | MTR_0127s0040 | 30.804 | 224 | 143 | 6 | 90 | 306 | 4 | 222 | 9.00e-25 | 100 |
| MS.gene88960.t1 | MTR_3g463960 | 29.878 | 328 | 188 | 13 | 2 | 301 | 54 | 367 | 1.03e-24 | 102 |
| MS.gene88960.t1 | MTR_3g463950 | 29.878 | 328 | 188 | 13 | 2 | 301 | 54 | 367 | 1.03e-24 | 102 |
| MS.gene88960.t1 | MTR_3g463970 | 29.878 | 328 | 188 | 13 | 2 | 301 | 54 | 367 | 1.03e-24 | 102 |
| MS.gene88960.t1 | MTR_3g463940 | 29.878 | 328 | 188 | 13 | 2 | 301 | 54 | 367 | 1.03e-24 | 102 |
| MS.gene88960.t1 | MTR_2g015580 | 27.500 | 320 | 205 | 12 | 2 | 301 | 57 | 369 | 1.49e-24 | 102 |
| MS.gene88960.t1 | MTR_7g033165 | 28.758 | 306 | 182 | 10 | 19 | 296 | 57 | 354 | 2.69e-24 | 101 |
| MS.gene88960.t1 | MTR_4g104240 | 29.154 | 319 | 194 | 13 | 2 | 300 | 49 | 355 | 3.41e-24 | 101 |
| MS.gene88960.t1 | MTR_8g089805 | 26.837 | 313 | 191 | 11 | 18 | 300 | 63 | 367 | 7.42e-24 | 100 |
| MS.gene88960.t1 | MTR_4g036385 | 38.793 | 116 | 70 | 1 | 187 | 301 | 9 | 124 | 8.54e-24 | 94.7 |
| MS.gene88960.t1 | MTR_2g043980 | 28.720 | 289 | 168 | 10 | 29 | 298 | 68 | 337 | 9.12e-24 | 100 |
| MS.gene88960.t1 | MTR_1g030220 | 27.937 | 315 | 182 | 12 | 18 | 300 | 63 | 364 | 1.28e-23 | 100 |
| MS.gene88960.t1 | MTR_2g079090 | 28.527 | 319 | 189 | 13 | 2 | 301 | 40 | 338 | 1.51e-23 | 99.4 |
| MS.gene88960.t1 | MTR_8g022810 | 32.308 | 195 | 123 | 6 | 1 | 192 | 50 | 238 | 2.00e-23 | 98.6 |
| MS.gene88960.t1 | MTR_2g079080 | 28.213 | 319 | 190 | 13 | 2 | 301 | 40 | 338 | 3.25e-23 | 98.2 |
| MS.gene88960.t1 | MTR_3g438030 | 27.740 | 292 | 179 | 10 | 29 | 298 | 66 | 347 | 3.32e-23 | 98.6 |
| MS.gene88960.t1 | MTR_4g056220 | 41.509 | 106 | 61 | 1 | 199 | 303 | 74 | 179 | 4.29e-23 | 94.7 |
| MS.gene88960.t1 | MTR_1g030230 | 28.523 | 298 | 179 | 11 | 30 | 300 | 66 | 356 | 5.61e-23 | 98.2 |
| MS.gene88960.t1 | MTR_6g007095 | 27.331 | 311 | 184 | 10 | 19 | 301 | 65 | 361 | 9.63e-23 | 99.0 |
| MS.gene88960.t1 | MTR_6g007095 | 25.974 | 308 | 181 | 9 | 18 | 301 | 393 | 677 | 7.76e-20 | 90.1 |
| MS.gene88960.t1 | MTR_6g007100 | 25.581 | 301 | 199 | 8 | 15 | 301 | 53 | 342 | 1.32e-22 | 96.7 |
| MS.gene88960.t1 | MTR_1g030340 | 26.603 | 312 | 189 | 11 | 19 | 300 | 66 | 367 | 1.35e-22 | 97.1 |
| MS.gene88960.t1 | MTR_0029s0050 | 28.213 | 319 | 190 | 13 | 2 | 301 | 40 | 338 | 1.99e-22 | 96.3 |
| MS.gene88960.t1 | MTR_1g030265 | 28.261 | 276 | 165 | 9 | 52 | 300 | 60 | 329 | 3.46e-22 | 95.5 |
| MS.gene88960.t1 | MTR_7g116870 | 25.836 | 329 | 203 | 11 | 4 | 301 | 38 | 356 | 6.74e-22 | 95.1 |
| MS.gene88960.t1 | MTR_0029s0100 | 28.213 | 319 | 190 | 13 | 2 | 301 | 40 | 338 | 7.36e-22 | 94.7 |
| MS.gene88960.t1 | MTR_1g082390 | 26.073 | 303 | 192 | 10 | 18 | 295 | 55 | 350 | 1.29e-21 | 94.0 |
| MS.gene88960.t1 | MTR_1g060490 | 26.861 | 309 | 191 | 13 | 1 | 297 | 46 | 331 | 2.29e-21 | 93.2 |
| MS.gene88960.t1 | MTR_7g111780 | 27.368 | 285 | 174 | 12 | 30 | 296 | 71 | 340 | 3.03e-21 | 92.8 |
| MS.gene88960.t1 | MTR_6g007090 | 28.339 | 307 | 178 | 12 | 18 | 296 | 62 | 354 | 5.85e-21 | 92.4 |
| MS.gene88960.t1 | MTR_8g028160 | 26.198 | 313 | 192 | 12 | 19 | 301 | 60 | 363 | 5.91e-21 | 92.4 |
| MS.gene88960.t1 | MTR_5g093090 | 28.958 | 259 | 171 | 6 | 1 | 251 | 37 | 290 | 1.47e-20 | 90.1 |
| MS.gene88960.t1 | MTR_7g113860 | 26.182 | 275 | 164 | 9 | 52 | 296 | 17 | 282 | 2.56e-20 | 89.7 |
| MS.gene88960.t1 | MTR_7g104220 | 27.148 | 291 | 180 | 13 | 19 | 297 | 67 | 337 | 3.02e-20 | 90.1 |
| MS.gene88960.t1 | MTR_7g033155 | 25.982 | 331 | 184 | 14 | 19 | 301 | 62 | 379 | 3.87e-20 | 90.1 |
| MS.gene88960.t1 | MTR_2g015590 | 27.217 | 327 | 208 | 12 | 2 | 306 | 41 | 359 | 1.83e-19 | 88.2 |
| MS.gene88960.t1 | MTR_8g038680 | 25.723 | 311 | 194 | 8 | 19 | 301 | 52 | 353 | 4.86e-19 | 86.7 |
| MS.gene88960.t1 | MTR_2g018015 | 34.078 | 179 | 110 | 6 | 11 | 184 | 55 | 230 | 7.20e-19 | 85.5 |
| MS.gene88960.t1 | MTR_8g089805 | 25.806 | 279 | 171 | 9 | 52 | 300 | 27 | 299 | 7.67e-19 | 85.5 |
| MS.gene88960.t1 | MTR_1g030268 | 29.482 | 251 | 148 | 11 | 19 | 251 | 64 | 303 | 3.38e-18 | 84.0 |
| MS.gene88960.t1 | MTR_3g448360 | 27.385 | 325 | 192 | 13 | 2 | 298 | 39 | 347 | 3.97e-18 | 84.3 |
| MS.gene88960.t1 | MTR_7g033150 | 25.076 | 327 | 181 | 13 | 19 | 301 | 59 | 365 | 8.75e-18 | 83.2 |
| MS.gene88960.t1 | MTR_2g017925 | 30.000 | 210 | 131 | 7 | 90 | 295 | 26 | 223 | 2.80e-17 | 80.5 |
| MS.gene88960.t1 | MTR_1g092690 | 27.036 | 307 | 186 | 14 | 1 | 294 | 60 | 341 | 2.93e-17 | 81.6 |
| MS.gene88960.t1 | MTR_3g069520 | 27.541 | 305 | 183 | 12 | 19 | 298 | 54 | 345 | 5.65e-17 | 80.9 |
| MS.gene88960.t1 | MTR_1g060500 | 24.830 | 294 | 190 | 11 | 19 | 297 | 65 | 342 | 4.28e-16 | 78.2 |
| MS.gene88960.t1 | MTR_7g111780 | 26.562 | 256 | 153 | 11 | 61 | 296 | 1 | 241 | 4.61e-16 | 77.0 |
| MS.gene88960.t1 | MTR_6g049220 | 45.570 | 79 | 43 | 0 | 1 | 79 | 39 | 117 | 4.97e-15 | 72.0 |
| MS.gene88960.t1 | MTR_1g092740 | 26.183 | 317 | 189 | 13 | 1 | 298 | 47 | 337 | 5.11e-15 | 75.1 |
| MS.gene88960.t1 | MTR_2g017895 | 25.373 | 268 | 165 | 8 | 41 | 302 | 6 | 244 | 5.58e-15 | 73.9 |
| MS.gene88960.t1 | MTR_5g084880 | 29.730 | 111 | 78 | 0 | 142 | 252 | 3 | 113 | 2.41e-14 | 69.3 |
| MS.gene88960.t1 | MTR_2g015650 | 25.000 | 300 | 198 | 10 | 18 | 298 | 59 | 350 | 2.41e-14 | 73.2 |
| MS.gene88960.t1 | MTR_5g093090 | 34.043 | 141 | 84 | 4 | 1 | 133 | 37 | 176 | 7.09e-14 | 69.7 |
| MS.gene88960.t1 | MTR_2g087292 | 36.290 | 124 | 73 | 4 | 1 | 121 | 42 | 162 | 7.70e-14 | 70.9 |
| MS.gene88960.t1 | MTR_5g093550 | 49.123 | 57 | 29 | 0 | 247 | 303 | 75 | 131 | 2.61e-13 | 66.6 |
| MS.gene88960.t1 | MTR_8g012540 | 25.275 | 273 | 175 | 8 | 19 | 271 | 52 | 315 | 4.03e-13 | 69.3 |
| MS.gene88960.t1 | MTR_2g043990 | 27.391 | 230 | 113 | 11 | 29 | 238 | 130 | 325 | 1.15e-12 | 67.8 |
| MS.gene88960.t1 | MTR_2g015670 | 25.166 | 302 | 181 | 11 | 18 | 298 | 59 | 336 | 1.93e-12 | 67.4 |
| MS.gene88960.t1 | MTR_3g011860 | 33.028 | 109 | 69 | 2 | 172 | 280 | 217 | 321 | 3.05e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88960.t1 | AT1G75880 | 53.922 | 306 | 140 | 1 | 1 | 305 | 61 | 366 | 1.83e-119 | 348 |
| MS.gene88960.t1 | AT1G75900 | 52.145 | 303 | 143 | 2 | 1 | 302 | 52 | 353 | 6.97e-118 | 343 |
| MS.gene88960.t1 | AT1G75880 | 53.746 | 307 | 140 | 2 | 1 | 305 | 61 | 367 | 1.26e-117 | 343 |
| MS.gene88960.t1 | AT1G75890 | 50.658 | 304 | 148 | 2 | 1 | 302 | 56 | 359 | 1.56e-115 | 338 |
| MS.gene88960.t1 | AT1G75890 | 50.658 | 304 | 148 | 2 | 1 | 302 | 85 | 388 | 2.82e-115 | 338 |
| MS.gene88960.t1 | AT5G42170 | 50.993 | 302 | 144 | 2 | 1 | 301 | 59 | 357 | 3.89e-115 | 337 |
| MS.gene88960.t1 | AT3G14820 | 51.325 | 302 | 142 | 3 | 1 | 301 | 41 | 338 | 4.30e-113 | 331 |
| MS.gene88960.t1 | AT1G75890 | 48.580 | 317 | 148 | 3 | 1 | 302 | 56 | 372 | 9.38e-112 | 328 |
| MS.gene88960.t1 | AT1G59406 | 50.825 | 303 | 143 | 4 | 1 | 301 | 39 | 337 | 1.15e-109 | 322 |
| MS.gene88960.t1 | AT1G59030 | 50.825 | 303 | 143 | 4 | 1 | 301 | 39 | 337 | 1.15e-109 | 322 |
| MS.gene88960.t1 | AT1G58725 | 50.825 | 303 | 143 | 4 | 1 | 301 | 39 | 337 | 1.15e-109 | 322 |
| MS.gene88960.t1 | AT1G58520 | 48.185 | 303 | 144 | 5 | 1 | 301 | 39 | 330 | 5.48e-100 | 297 |
| MS.gene88960.t1 | AT1G58525 | 48.185 | 303 | 144 | 5 | 1 | 301 | 39 | 330 | 5.48e-100 | 297 |
| MS.gene88960.t1 | AT1G20120 | 45.515 | 301 | 163 | 1 | 1 | 300 | 87 | 387 | 1.29e-97 | 293 |
| MS.gene88960.t1 | AT3G43570 | 46.689 | 302 | 128 | 4 | 1 | 301 | 39 | 308 | 8.87e-97 | 288 |
| MS.gene88960.t1 | AT1G20132 | 45.695 | 302 | 163 | 1 | 1 | 301 | 70 | 371 | 3.86e-95 | 286 |
| MS.gene88960.t1 | AT2G31540 | 43.750 | 304 | 166 | 4 | 1 | 300 | 44 | 346 | 3.79e-86 | 263 |
| MS.gene88960.t1 | AT2G04570 | 41.722 | 302 | 175 | 1 | 1 | 301 | 37 | 338 | 5.36e-86 | 262 |
| MS.gene88960.t1 | AT3G43550 | 50.397 | 252 | 120 | 3 | 1 | 251 | 39 | 286 | 3.02e-84 | 255 |
| MS.gene88960.t1 | AT5G03810 | 41.914 | 303 | 174 | 2 | 1 | 301 | 39 | 341 | 6.02e-84 | 257 |
| MS.gene88960.t1 | AT1G73610 | 42.053 | 302 | 161 | 4 | 1 | 301 | 44 | 332 | 1.20e-82 | 253 |
| MS.gene88960.t1 | AT2G30310 | 42.333 | 300 | 170 | 3 | 1 | 297 | 43 | 342 | 5.33e-82 | 252 |
| MS.gene88960.t1 | AT2G40250 | 40.575 | 313 | 177 | 3 | 1 | 306 | 45 | 355 | 6.37e-82 | 252 |
| MS.gene88960.t1 | AT2G30220 | 42.053 | 302 | 172 | 3 | 2 | 300 | 43 | 344 | 1.48e-80 | 248 |
| MS.gene88960.t1 | AT1G06990 | 38.762 | 307 | 185 | 2 | 1 | 305 | 46 | 351 | 3.33e-80 | 248 |
| MS.gene88960.t1 | AT2G24560 | 41.333 | 300 | 173 | 3 | 1 | 297 | 43 | 342 | 7.50e-80 | 247 |
| MS.gene88960.t1 | AT1G58430 | 42.525 | 301 | 168 | 4 | 1 | 297 | 44 | 343 | 1.53e-79 | 246 |
| MS.gene88960.t1 | AT1G20130 | 41.290 | 310 | 168 | 3 | 2 | 300 | 194 | 500 | 3.07e-78 | 247 |
| MS.gene88960.t1 | AT5G63170 | 40.468 | 299 | 163 | 4 | 1 | 297 | 37 | 322 | 3.83e-78 | 241 |
| MS.gene88960.t1 | AT1G20130 | 41.290 | 310 | 168 | 3 | 2 | 300 | 214 | 520 | 8.11e-78 | 246 |
| MS.gene88960.t1 | AT4G26790 | 37.338 | 308 | 192 | 1 | 1 | 307 | 38 | 345 | 6.58e-77 | 239 |
| MS.gene88960.t1 | AT4G26790 | 37.338 | 308 | 192 | 1 | 1 | 307 | 38 | 345 | 6.58e-77 | 239 |
| MS.gene88960.t1 | AT5G45960 | 39.073 | 302 | 179 | 2 | 1 | 297 | 56 | 357 | 2.42e-76 | 238 |
| MS.gene88960.t1 | AT5G03820 | 39.803 | 304 | 180 | 2 | 1 | 301 | 42 | 345 | 3.64e-76 | 237 |
| MS.gene88960.t1 | AT3G16370 | 39.274 | 303 | 182 | 2 | 1 | 301 | 39 | 341 | 3.94e-76 | 237 |
| MS.gene88960.t1 | AT5G03820 | 39.803 | 304 | 180 | 2 | 1 | 301 | 70 | 373 | 1.54e-75 | 236 |
| MS.gene88960.t1 | AT5G22810 | 40.000 | 305 | 179 | 2 | 1 | 301 | 43 | 347 | 1.77e-75 | 235 |
| MS.gene88960.t1 | AT2G42990 | 37.785 | 307 | 190 | 1 | 1 | 306 | 37 | 343 | 8.12e-75 | 233 |
| MS.gene88960.t1 | AT1G23500 | 41.472 | 299 | 160 | 4 | 1 | 297 | 44 | 329 | 5.96e-73 | 228 |
| MS.gene88960.t1 | AT3G53100 | 37.908 | 306 | 189 | 1 | 1 | 305 | 38 | 343 | 8.14e-72 | 226 |
| MS.gene88960.t1 | AT1G20135 | 37.294 | 303 | 175 | 5 | 1 | 301 | 38 | 327 | 1.06e-69 | 219 |
| MS.gene88960.t1 | AT1G75920 | 40.594 | 303 | 169 | 3 | 1 | 301 | 38 | 331 | 1.71e-68 | 217 |
| MS.gene88960.t1 | AT1G75920 | 39.932 | 293 | 165 | 3 | 11 | 301 | 20 | 303 | 5.98e-65 | 207 |
| MS.gene88960.t1 | AT1G75920 | 38.801 | 317 | 168 | 4 | 1 | 300 | 33 | 340 | 2.36e-64 | 206 |
| MS.gene88960.t1 | AT1G75910 | 38.614 | 303 | 174 | 4 | 1 | 300 | 37 | 330 | 1.78e-61 | 199 |
| MS.gene88960.t1 | AT5G45950 | 34.754 | 305 | 194 | 4 | 1 | 305 | 49 | 348 | 1.20e-60 | 197 |
| MS.gene88960.t1 | AT3G50400 | 34.076 | 314 | 197 | 7 | 1 | 305 | 43 | 355 | 5.84e-57 | 188 |
| MS.gene88960.t1 | AT2G23540 | 33.439 | 314 | 198 | 7 | 1 | 305 | 57 | 368 | 8.71e-57 | 188 |
| MS.gene88960.t1 | AT1G33811 | 34.505 | 313 | 192 | 9 | 1 | 304 | 43 | 351 | 2.17e-55 | 184 |
| MS.gene88960.t1 | AT2G24560 | 38.976 | 254 | 152 | 3 | 1 | 251 | 43 | 296 | 2.36e-55 | 182 |
| MS.gene88960.t1 | AT1G29670 | 35.599 | 309 | 188 | 7 | 1 | 304 | 41 | 343 | 4.39e-54 | 180 |
| MS.gene88960.t1 | AT5G45670 | 34.194 | 310 | 197 | 5 | 1 | 306 | 38 | 344 | 4.92e-54 | 180 |
| MS.gene88960.t1 | AT4G18970 | 33.974 | 312 | 195 | 7 | 1 | 306 | 37 | 343 | 6.26e-54 | 180 |
| MS.gene88960.t1 | AT4G28780 | 32.013 | 303 | 203 | 3 | 1 | 301 | 40 | 341 | 6.82e-54 | 180 |
| MS.gene88960.t1 | AT5G33370 | 35.179 | 307 | 188 | 5 | 1 | 301 | 39 | 340 | 9.16e-54 | 179 |
| MS.gene88960.t1 | AT2G31550 | 40.488 | 205 | 120 | 2 | 98 | 300 | 1 | 205 | 1.02e-53 | 175 |
| MS.gene88960.t1 | AT1G29670 | 35.599 | 309 | 188 | 7 | 1 | 304 | 109 | 411 | 2.24e-53 | 180 |
| MS.gene88960.t1 | AT4G18970 | 33.974 | 312 | 195 | 7 | 1 | 306 | 37 | 343 | 2.84e-53 | 179 |
| MS.gene88960.t1 | AT5G08460 | 33.981 | 309 | 194 | 6 | 1 | 302 | 58 | 363 | 4.15e-52 | 176 |
| MS.gene88960.t1 | AT5G18430 | 32.792 | 308 | 204 | 2 | 1 | 305 | 37 | 344 | 8.30e-52 | 174 |
| MS.gene88960.t1 | AT4G10950 | 30.293 | 307 | 203 | 4 | 1 | 301 | 80 | 381 | 2.07e-51 | 174 |
| MS.gene88960.t1 | AT5G37690 | 32.787 | 305 | 198 | 6 | 2 | 303 | 37 | 337 | 5.03e-51 | 172 |
| MS.gene88960.t1 | AT1G75920 | 34.983 | 303 | 155 | 4 | 1 | 301 | 38 | 300 | 1.20e-50 | 170 |
| MS.gene88960.t1 | AT1G29660 | 33.667 | 300 | 191 | 5 | 1 | 296 | 41 | 336 | 1.79e-50 | 171 |
| MS.gene88960.t1 | AT1G71691 | 35.082 | 305 | 187 | 8 | 1 | 301 | 64 | 361 | 3.61e-50 | 171 |
| MS.gene88960.t1 | AT1G71250 | 33.882 | 304 | 196 | 4 | 1 | 301 | 50 | 351 | 2.42e-49 | 168 |
| MS.gene88960.t1 | AT5G15720 | 35.275 | 309 | 187 | 9 | 1 | 301 | 39 | 342 | 3.39e-49 | 167 |
| MS.gene88960.t1 | AT4G10950 | 30.293 | 307 | 199 | 5 | 1 | 301 | 80 | 377 | 1.14e-48 | 167 |
| MS.gene88960.t1 | AT1G75930 | 34.211 | 304 | 185 | 6 | 1 | 300 | 38 | 330 | 3.23e-47 | 162 |
| MS.gene88960.t1 | AT5G41890 | 33.538 | 325 | 188 | 11 | 1 | 305 | 40 | 356 | 4.31e-47 | 162 |
| MS.gene88960.t1 | AT3G04290 | 32.237 | 304 | 201 | 4 | 1 | 301 | 38 | 339 | 4.67e-47 | 162 |
| MS.gene88960.t1 | AT2G19060 | 36.039 | 308 | 172 | 11 | 2 | 301 | 40 | 330 | 1.83e-46 | 160 |
| MS.gene88960.t1 | AT1G74460 | 30.421 | 309 | 208 | 6 | 2 | 306 | 33 | 338 | 2.17e-46 | 160 |
| MS.gene88960.t1 | AT2G19050 | 33.993 | 303 | 183 | 9 | 2 | 301 | 41 | 329 | 8.32e-46 | 158 |
| MS.gene88960.t1 | AT5G37690 | 31.803 | 305 | 193 | 7 | 2 | 303 | 37 | 329 | 9.53e-46 | 158 |
| MS.gene88960.t1 | AT2G19010 | 34.084 | 311 | 180 | 11 | 2 | 305 | 40 | 332 | 3.82e-45 | 157 |
| MS.gene88960.t1 | AT2G19010 | 34.084 | 311 | 180 | 11 | 2 | 305 | 70 | 362 | 7.47e-45 | 157 |
| MS.gene88960.t1 | AT5G55050 | 33.227 | 313 | 191 | 9 | 1 | 301 | 48 | 354 | 1.23e-44 | 156 |
| MS.gene88960.t1 | AT1G53920 | 29.126 | 309 | 196 | 9 | 1 | 297 | 57 | 354 | 6.53e-41 | 146 |
| MS.gene88960.t1 | AT1G71120 | 31.803 | 305 | 192 | 9 | 2 | 300 | 41 | 335 | 5.33e-40 | 143 |
| MS.gene88960.t1 | AT5G33370 | 34.630 | 257 | 157 | 5 | 1 | 251 | 39 | 290 | 1.31e-38 | 139 |
| MS.gene88960.t1 | AT1G71691 | 32.197 | 264 | 169 | 7 | 42 | 301 | 3 | 260 | 3.01e-37 | 134 |
| MS.gene88960.t1 | AT2G03980 | 32.787 | 305 | 182 | 12 | 1 | 294 | 52 | 344 | 3.39e-37 | 136 |
| MS.gene88960.t1 | AT2G03980 | 32.787 | 305 | 182 | 12 | 1 | 294 | 52 | 344 | 3.39e-37 | 136 |
| MS.gene88960.t1 | AT2G03980 | 32.787 | 305 | 182 | 12 | 1 | 294 | 52 | 344 | 3.39e-37 | 136 |
| MS.gene88960.t1 | AT2G03980 | 32.787 | 305 | 182 | 12 | 1 | 294 | 52 | 344 | 3.39e-37 | 136 |
| MS.gene88960.t1 | AT5G15720 | 33.463 | 257 | 161 | 7 | 53 | 301 | 57 | 311 | 3.82e-36 | 132 |
| MS.gene88960.t1 | AT4G30140 | 31.148 | 305 | 187 | 10 | 2 | 301 | 43 | 329 | 2.69e-35 | 130 |
| MS.gene88960.t1 | AT2G19050 | 34.583 | 240 | 144 | 7 | 2 | 238 | 41 | 270 | 3.55e-35 | 129 |
| MS.gene88960.t1 | AT4G16230 | 34.597 | 211 | 130 | 4 | 1 | 206 | 39 | 246 | 4.28e-33 | 122 |
| MS.gene88960.t1 | AT5G40990 | 28.296 | 311 | 200 | 9 | 2 | 298 | 47 | 348 | 2.12e-32 | 123 |
| MS.gene88960.t1 | AT5G15720 | 33.977 | 259 | 158 | 9 | 1 | 251 | 39 | 292 | 1.15e-31 | 120 |
| MS.gene88960.t1 | AT1G71691 | 32.941 | 255 | 160 | 8 | 1 | 251 | 64 | 311 | 1.63e-31 | 120 |
| MS.gene88960.t1 | AT3G14225 | 25.890 | 309 | 216 | 5 | 1 | 298 | 46 | 352 | 3.58e-30 | 117 |
| MS.gene88960.t1 | AT3G14225 | 26.129 | 310 | 210 | 6 | 1 | 298 | 46 | 348 | 6.41e-30 | 117 |
| MS.gene88960.t1 | AT2G04020 | 36.239 | 218 | 111 | 9 | 1 | 203 | 52 | 256 | 1.03e-29 | 114 |
| MS.gene88960.t1 | AT1G54790 | 25.246 | 305 | 195 | 8 | 18 | 296 | 56 | 353 | 1.62e-28 | 113 |
| MS.gene88960.t1 | AT2G04020 | 37.056 | 197 | 101 | 7 | 1 | 187 | 52 | 235 | 1.77e-28 | 112 |
| MS.gene88960.t1 | AT1G53940 | 27.157 | 313 | 201 | 10 | 2 | 298 | 49 | 350 | 4.26e-28 | 112 |
| MS.gene88960.t1 | AT3G05180 | 26.837 | 313 | 198 | 7 | 18 | 305 | 60 | 366 | 4.86e-28 | 112 |
| MS.gene88960.t1 | AT1G53990 | 26.861 | 309 | 200 | 9 | 2 | 298 | 45 | 339 | 3.63e-27 | 109 |
| MS.gene88960.t1 | AT5G14450 | 29.206 | 315 | 187 | 10 | 19 | 305 | 65 | 371 | 1.05e-25 | 105 |
| MS.gene88960.t1 | AT2G27360 | 29.412 | 323 | 195 | 11 | 2 | 300 | 43 | 356 | 2.99e-25 | 104 |
| MS.gene88960.t1 | AT1G54790 | 24.742 | 291 | 187 | 7 | 32 | 296 | 68 | 352 | 5.45e-25 | 103 |
| MS.gene88960.t1 | AT3G48460 | 27.673 | 318 | 204 | 13 | 2 | 301 | 48 | 357 | 2.34e-23 | 99.0 |
| MS.gene88960.t1 | AT1G56670 | 25.965 | 285 | 191 | 9 | 30 | 301 | 75 | 352 | 1.36e-22 | 97.1 |
| MS.gene88960.t1 | AT1G28610 | 28.743 | 334 | 193 | 12 | 2 | 306 | 41 | 358 | 2.41e-22 | 96.3 |
| MS.gene88960.t1 | AT3G27950 | 27.974 | 311 | 184 | 12 | 18 | 302 | 55 | 351 | 2.51e-22 | 96.3 |
| MS.gene88960.t1 | AT3G26430 | 25.667 | 300 | 182 | 10 | 29 | 296 | 64 | 354 | 1.34e-21 | 94.4 |
| MS.gene88960.t1 | AT5G03610 | 26.814 | 317 | 193 | 12 | 2 | 300 | 53 | 348 | 3.33e-21 | 92.8 |
| MS.gene88960.t1 | AT4G01130 | 25.084 | 299 | 184 | 8 | 29 | 296 | 67 | 356 | 3.40e-21 | 93.2 |
| MS.gene88960.t1 | AT1G28580 | 27.385 | 325 | 200 | 12 | 2 | 301 | 47 | 360 | 2.41e-20 | 90.9 |
| MS.gene88960.t1 | AT1G09390 | 27.273 | 286 | 186 | 10 | 30 | 301 | 72 | 349 | 2.45e-20 | 90.5 |
| MS.gene88960.t1 | AT1G67830 | 26.518 | 313 | 192 | 11 | 18 | 300 | 53 | 357 | 2.67e-20 | 90.5 |
| MS.gene88960.t1 | AT1G28650 | 27.864 | 323 | 195 | 13 | 2 | 298 | 47 | 357 | 3.96e-20 | 90.1 |
| MS.gene88960.t1 | AT1G28570 | 27.795 | 331 | 201 | 14 | 2 | 306 | 44 | 362 | 5.63e-20 | 89.7 |
| MS.gene88960.t1 | AT1G54790 | 22.713 | 317 | 187 | 8 | 32 | 296 | 68 | 378 | 7.76e-20 | 89.4 |
| MS.gene88960.t1 | AT1G28600 | 27.356 | 329 | 194 | 14 | 2 | 301 | 41 | 353 | 9.07e-20 | 89.0 |
| MS.gene88960.t1 | AT1G54030 | 25.333 | 300 | 190 | 11 | 2 | 294 | 62 | 334 | 1.02e-19 | 89.4 |
| MS.gene88960.t1 | AT1G31550 | 27.217 | 327 | 197 | 15 | 2 | 301 | 46 | 358 | 2.10e-19 | 88.2 |
| MS.gene88960.t1 | AT1G28640 | 27.385 | 325 | 194 | 17 | 2 | 298 | 45 | 355 | 3.10e-19 | 87.4 |
| MS.gene88960.t1 | AT1G54020 | 26.460 | 291 | 184 | 11 | 11 | 294 | 53 | 320 | 1.22e-18 | 85.9 |
| MS.gene88960.t1 | AT1G28670 | 28.308 | 325 | 198 | 14 | 2 | 301 | 45 | 359 | 1.88e-18 | 85.1 |
| MS.gene88960.t1 | AT1G28590 | 27.879 | 330 | 202 | 14 | 2 | 306 | 46 | 364 | 2.84e-18 | 84.7 |
| MS.gene88960.t1 | AT3G62280 | 25.606 | 289 | 185 | 10 | 30 | 301 | 71 | 346 | 1.86e-17 | 82.4 |
| MS.gene88960.t1 | AT1G53940 | 25.573 | 262 | 176 | 8 | 2 | 254 | 49 | 300 | 2.41e-17 | 81.3 |
| MS.gene88960.t1 | AT4G01130 | 24.632 | 272 | 170 | 7 | 56 | 296 | 3 | 270 | 2.97e-17 | 80.9 |
| MS.gene88960.t1 | AT1G28660 | 26.769 | 325 | 202 | 13 | 2 | 301 | 45 | 358 | 4.96e-17 | 81.3 |
| MS.gene88960.t1 | AT3G09930 | 26.266 | 316 | 197 | 13 | 2 | 300 | 49 | 345 | 3.07e-16 | 78.6 |
| MS.gene88960.t1 | AT3G09930 | 26.266 | 316 | 197 | 13 | 2 | 300 | 49 | 345 | 3.07e-16 | 78.6 |
| MS.gene88960.t1 | AT1G28660 | 27.077 | 325 | 200 | 14 | 2 | 301 | 45 | 357 | 5.21e-16 | 78.2 |
| MS.gene88960.t1 | AT4G16233 | 35.185 | 108 | 68 | 2 | 199 | 305 | 5 | 111 | 1.69e-15 | 72.4 |
| MS.gene88960.t1 | AT5G45910 | 26.230 | 305 | 192 | 14 | 19 | 298 | 59 | 355 | 2.00e-15 | 76.3 |
| MS.gene88960.t1 | AT3G14220 | 26.042 | 288 | 178 | 10 | 19 | 294 | 60 | 324 | 1.04e-14 | 74.3 |
| MS.gene88960.t1 | AT1G56670 | 24.786 | 234 | 153 | 8 | 30 | 251 | 75 | 297 | 5.16e-14 | 71.6 |
| MS.gene88960.t1 | AT4G01130 | 24.074 | 270 | 173 | 9 | 4 | 251 | 39 | 298 | 1.55e-13 | 70.5 |
| MS.gene88960.t1 | AT3G14210 | 26.389 | 288 | 178 | 14 | 19 | 294 | 65 | 330 | 2.82e-12 | 67.0 |
| MS.gene88960.t1 | AT3G62280 | 25.214 | 234 | 150 | 8 | 30 | 251 | 71 | 291 | 8.09e-12 | 65.1 |
| MS.gene88960.t1 | AT2G36325 | 24.281 | 313 | 210 | 12 | 2 | 305 | 57 | 351 | 1.24e-11 | 65.1 |
| MS.gene88960.t1 | AT4G16220 | 42.857 | 84 | 44 | 2 | 1 | 84 | 39 | 118 | 8.50e-11 | 61.6 |
Find 63 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAATATCTTCCAGCATATT+TGG | 0.150743 | 1.4:+90527 | MS.gene88960:CDS |
| ATTCTTTGAATAATTCTATC+TGG | 0.217150 | 1.4:-90875 | None:intergenic |
| AAGTAGCAGGATTGTTTATA+TGG | 0.252807 | 1.4:+91869 | MS.gene88960:CDS |
| ACGACTCGGATTATGTGTTT+TGG | 0.299162 | 1.4:+93061 | MS.gene88960:CDS |
| TTACTATCAGTTGAAGAATT+AGG | 0.313281 | 1.4:+90498 | MS.gene88960:intron |
| ACCGGTGTTAACTTTGCTTC+CGG | 0.332637 | 1.4:+90579 | MS.gene88960:CDS |
| CGGCCTAGTGAATTGGTTAC+CGG | 0.347882 | 1.4:+90561 | MS.gene88960:CDS |
| AATTCACTAGGCCGAAGATT+TGG | 0.357173 | 1.4:-90552 | None:intergenic |
| GGAGATTCAATCATGGATAC+TGG | 0.365221 | 1.4:+90261 | None:intergenic |
| AAATCTTCGGCCTAGTGAAT+TGG | 0.385004 | 1.4:+90554 | MS.gene88960:CDS |
| TATAAGCTGAGTCTACTAAA+AGG | 0.388730 | 1.4:-91055 | None:intergenic |
| CCTTGAAAATCTTTGCCATA+TGG | 0.389112 | 1.4:-90327 | None:intergenic |
| TTACAATGATATCAAGTATA+GGG | 0.396353 | 1.4:-91902 | None:intergenic |
| CGCCTGTGCCACAGCACCCT+CGG | 0.404574 | 1.4:-92990 | None:intergenic |
| AACTTTGCTTCCGGTGGTGC+AGG | 0.405817 | 1.4:+90588 | MS.gene88960:CDS |
| TAGCACAAAATAAATACTAT+TGG | 0.418137 | 1.4:-90952 | None:intergenic |
| GTATTCAATGTACCACCAAT+TGG | 0.435799 | 1.4:+91717 | MS.gene88960:CDS |
| ATATAAACAATCCTGCTACT+TGG | 0.437775 | 1.4:-91867 | None:intergenic |
| AAGGTTCCAGCAGATCTTAT+AGG | 0.461354 | 1.4:+90381 | MS.gene88960:CDS |
| TTTCAAGGAGGAATTCCAAC+TGG | 0.466996 | 1.4:+90342 | MS.gene88960:CDS |
| GACCGAGGGTGCTGTGGCAC+AGG | 0.468131 | 1.4:+92988 | MS.gene88960:CDS |
| TTCTTTGAATAATTCTATCT+GGG | 0.473576 | 1.4:-90874 | None:intergenic |
| GTTACAATGATATCAAGTAT+AGG | 0.478444 | 1.4:-91903 | None:intergenic |
| ATCCGAGTCGTTGGCACAAG+TGG | 0.479341 | 1.4:-93049 | None:intergenic |
| TGAAACGGTACGCACCCAAT+TGG | 0.481254 | 1.4:-91732 | None:intergenic |
| CAGTGCAAATTCCCTCCATA+TGG | 0.481728 | 1.4:+90312 | MS.gene88960:CDS |
| ATACTGGAAATAACAACAAC+AGG | 0.490434 | 1.4:+90277 | MS.gene88960:CDS |
| ATAGTACCTATAAGATCTGC+TGG | 0.491106 | 1.4:-90387 | None:intergenic |
| CATATTTGGATCCAAATCTT+CGG | 0.496362 | 1.4:+90541 | MS.gene88960:CDS |
| TATTCAATGTACCACCAATT+GGG | 0.499652 | 1.4:+91718 | MS.gene88960:CDS |
| CAACTAGGTGCAAGGAGGAT+AGG | 0.513503 | 1.4:+91693 | MS.gene88960:CDS |
| CCAGCCACTGTTCTCTGAAA+CGG | 0.517712 | 1.4:-91747 | None:intergenic |
| CTCAGCTTATAATTTCTACA+AGG | 0.522865 | 1.4:+91067 | MS.gene88960:CDS |
| TGGCACAAGTGGGTTCCAAA+TGG | 0.524285 | 1.4:-93038 | None:intergenic |
| AGATTTGGATCCAAATATGC+TGG | 0.530006 | 1.4:-90537 | None:intergenic |
| AACGGTACGCACCCAATTGG+TGG | 0.534120 | 1.4:-91729 | None:intergenic |
| CCATTGCTAAATCTTCCAGT+TGG | 0.534561 | 1.4:-90357 | None:intergenic |
| AATTTGCACTGAGTTGGTGT+TGG | 0.536542 | 1.4:-90300 | None:intergenic |
| TGAAAATCTTTGCCATATGG+AGG | 0.540087 | 1.4:-90324 | None:intergenic |
| ACCCACTTGTGCCAACGACT+CGG | 0.554324 | 1.4:+93047 | MS.gene88960:CDS |
| GAATATATTGTGAAGCTGAA+AGG | 0.555476 | 1.4:+90894 | MS.gene88960:CDS |
| AGGATCATATCCTGCACCAC+CGG | 0.561279 | 1.4:-90598 | None:intergenic |
| TGGAAGATTTAGCAATGGAA+AGG | 0.566706 | 1.4:+90362 | MS.gene88960:CDS |
| ACTAAAAGGTCAGAGTATGA+AGG | 0.568719 | 1.4:-91041 | None:intergenic |
| GAAAATCTTTGCCATATGGA+GGG | 0.573041 | 1.4:-90323 | None:intergenic |
| ACTTGGAAAATTCTGCTCAA+AGG | 0.574536 | 1.4:-91850 | None:intergenic |
| CCGTTTCAGAGAACAGTGGC+TGG | 0.574955 | 1.4:+91747 | MS.gene88960:CDS |
| GGAGGGAATTTGCACTGAGT+TGG | 0.578300 | 1.4:-90306 | None:intergenic |
| GTTGTAGACCGAGGGTGCTG+TGG | 0.590207 | 1.4:+92982 | MS.gene88960:CDS |
| GTGAAGCTGAAAGGACTAGT+TGG | 0.592305 | 1.4:+90903 | MS.gene88960:CDS |
| AAATGTATCAACTAGGTGCA+AGG | 0.593045 | 1.4:+91685 | MS.gene88960:CDS |
| AAACACATAATCCGAGTCGT+TGG | 0.610398 | 1.4:-93058 | None:intergenic |
| GGTGTTAACTTTGCTTCCGG+TGG | 0.610616 | 1.4:+90582 | MS.gene88960:CDS |
| TGAAAGGAAATGTATCAACT+AGG | 0.611457 | 1.4:+91678 | MS.gene88960:intron |
| TCCGAGTCGTTGGCACAAGT+GGG | 0.615115 | 1.4:-93048 | None:intergenic |
| GGCTTCAAAGTTGTAGACCG+AGG | 0.619507 | 1.4:+92973 | MS.gene88960:intron |
| CCAACTGGAAGATTTAGCAA+TGG | 0.628801 | 1.4:+90357 | MS.gene88960:CDS |
| GCTTCAAAGTTGTAGACCGA+GGG | 0.636914 | 1.4:+92974 | MS.gene88960:CDS |
| ACACCGGTAACCAATTCACT+AGG | 0.642501 | 1.4:-90564 | None:intergenic |
| TTTCAGAGAACAGTGGCTGG+AGG | 0.665786 | 1.4:+91750 | MS.gene88960:CDS |
| ACCGGAAGCAAAGTTAACAC+CGG | 0.679800 | 1.4:-90580 | None:intergenic |
| TGTATCAACTAGGTGCAAGG+AGG | 0.714837 | 1.4:+91688 | MS.gene88960:CDS |
| CGTACCGTTTCAGAGAACAG+TGG | 0.763484 | 1.4:+91743 | MS.gene88960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAACATAGTAAAAATT+TGG | - | chr1.4:92220-92239 | None:intergenic | 10.0% |
| !!! | TAAAAGAAATTTTTGATAAA+TGG | - | chr1.4:92858-92877 | None:intergenic | 10.0% |
| !!! | TTAATTCACTTTTTTTTTTT+TGG | + | chr1.4:92470-92489 | MS.gene88960:intron | 10.0% |
| !! | ATGATTCAAGATTTAATATT+TGG | + | chr1.4:92925-92944 | MS.gene88960:intron | 15.0% |
| !! | GTACTTTATATTTATGTTAA+AGG | + | chr1.4:92335-92354 | MS.gene88960:intron | 15.0% |
| !! | TGAAATCAAAAATATTTACA+AGG | - | chr1.4:91126-91145 | None:intergenic | 15.0% |
| !! | TTTATATTTATGTTAAAGGT+TGG | + | chr1.4:92339-92358 | MS.gene88960:intron | 15.0% |
| !!! | AATTGAGTTTCTTTTATTAT+TGG | + | chr1.4:92609-92628 | MS.gene88960:intron | 15.0% |
| !!! | ATTTAGAATTACCATATTTT+TGG | - | chr1.4:91932-91951 | None:intergenic | 15.0% |
| !!! | ATTTTATTACTATCATCAAT+TGG | - | chr1.4:90687-90706 | None:intergenic | 15.0% |
| !!! | CTTTTCATAGTATTTTATAT+TGG | + | chr1.4:92830-92849 | MS.gene88960:intron | 15.0% |
| !!! | TAACAAAACATATGTATTTT+TGG | + | chr1.4:92264-92283 | MS.gene88960:intron | 15.0% |
| !! | AAAAATTATTGTCAACTTGT+AGG | + | chr1.4:92952-92971 | MS.gene88960:intron | 20.0% |
| !! | AGTACTAAATTGAAAAACAA+GGG | - | chr1.4:93333-93352 | None:intergenic | 20.0% |
| !! | ATTCTTTGAATAATTCTATC+TGG | - | chr1.4:90878-90897 | None:intergenic | 20.0% |
| !! | GTTTATCACATTTAAAAATG+TGG | - | chr1.4:92146-92165 | None:intergenic | 20.0% |
| !! | TAATTCACTAGTAATACTTA+AGG | + | chr1.4:92573-92592 | MS.gene88960:intron | 20.0% |
| !! | TAGCACAAAATAAATACTAT+TGG | - | chr1.4:90955-90974 | None:intergenic | 20.0% |
| !! | TTACAATGATATCAAGTATA+GGG | - | chr1.4:91905-91924 | None:intergenic | 20.0% |
| !! | TTCTTTGAATAATTCTATCT+GGG | - | chr1.4:90877-90896 | None:intergenic | 20.0% |
| !!! | AGATACATGTACTTTTTATT+TGG | - | chr1.4:92291-92310 | None:intergenic | 20.0% |
| !!! | ATTCACTTTTTTTTTTTTGG+TGG | + | chr1.4:92473-92492 | MS.gene88960:intron | 20.0% |
| !!! | ATTTGCAACATAATTTTTTC+AGG | - | chr1.4:92410-92429 | None:intergenic | 20.0% |
| !!! | TATTTTTTTATGCAACCATT+TGG | + | chr1.4:93023-93042 | MS.gene88960:CDS | 20.0% |
| !!! | TTTTAATAACAATTACTCTC+CGG | + | chr1.4:92233-92252 | MS.gene88960:intron | 20.0% |
| !!! | TTTTAATTCCAAATGTTTTC+CGG | - | chr1.4:91520-91539 | None:intergenic | 20.0% |
| ! | AAAATAAGTGCTAGAGAATA+TGG | + | chr1.4:92799-92818 | MS.gene88960:intron | 25.0% |
| ! | AATCTCGTATATGTAAAAGT+TGG | - | chr1.4:92755-92774 | None:intergenic | 25.0% |
| ! | AGATAAATCAAAAGTCATGA+CGG | - | chr1.4:91200-91219 | None:intergenic | 25.0% |
| ! | ATTGTAACCTACCAAAAATA+TGG | + | chr1.4:91918-91937 | MS.gene88960:CDS | 25.0% |
| ! | CTAGAAAGAAAGAAACAAAA+AGG | + | chr1.4:90768-90787 | MS.gene88960:intron | 25.0% |
| ! | GAGTACTAAATTGAAAAACA+AGG | - | chr1.4:93334-93353 | None:intergenic | 25.0% |
| ! | GTTACAATGATATCAAGTAT+AGG | - | chr1.4:91906-91925 | None:intergenic | 25.0% |
| ! | TAAAAAATTTCAGCAAGCTT+TGG | + | chr1.4:91159-91178 | MS.gene88960:intron | 25.0% |
| ! | TCAATTCATGTTGAAAATTG+TGG | + | chr1.4:92040-92059 | MS.gene88960:intron | 25.0% |
| ! | TCCTTCTATTTACAAATGAA+AGG | + | chr1.4:91662-91681 | MS.gene88960:intron | 25.0% |
| ! | TCCTTTCATTTGTAAATAGA+AGG | - | chr1.4:91666-91685 | None:intergenic | 25.0% |
| ! | TGTATAAAATATGCAAAGTC+CGG | - | chr1.4:92516-92535 | None:intergenic | 25.0% |
| ! | TGTTTCCTTATATAATAAGC+AGG | + | chr1.4:90833-90852 | MS.gene88960:intron | 25.0% |
| ! | TTAATCAAGTGTAGAAAAAG+TGG | - | chr1.4:91976-91995 | None:intergenic | 25.0% |
| ! | TTACTATCAGTTGAAGAATT+AGG | + | chr1.4:90498-90517 | MS.gene88960:intron | 25.0% |
| !! | AATGTATTTCTGTAGACTTA+CGG | - | chr1.4:93130-93149 | None:intergenic | 25.0% |
| !! | CACTCTAACATTTGTTAATT+AGG | + | chr1.4:92376-92395 | MS.gene88960:intron | 25.0% |
| !! | CTCTTTTACTCATTTCAATT+AGG | - | chr1.4:90748-90767 | None:intergenic | 25.0% |
| !! | TCACTTAATTTGAGAAACTT+AGG | + | chr1.4:92774-92793 | MS.gene88960:intron | 25.0% |
| !! | TCATGACGGAAAATAATTAA+CGG | - | chr1.4:91186-91205 | None:intergenic | 25.0% |
| !!! | ACATATGTTTTGTTACTTGT+AGG | - | chr1.4:92259-92278 | None:intergenic | 25.0% |
| !!! | AGAATTACCATATTTTTGGT+AGG | - | chr1.4:91928-91947 | None:intergenic | 25.0% |
| !!! | AGTATTTATTTTGTGCTAGT+AGG | + | chr1.4:90957-90976 | MS.gene88960:CDS | 25.0% |
| !!! | TTTTGTTATGTGTAACAGAA+TGG | - | chr1.4:90414-90433 | None:intergenic | 25.0% |
| AAGTAGCAGGATTGTTTATA+TGG | + | chr1.4:91869-91888 | MS.gene88960:CDS | 30.0% | |
| AATTGTAGTTAACCACAGTT+TGG | - | chr1.4:92082-92101 | None:intergenic | 30.0% | |
| ACATCATAGAACAGTACATT+TGG | - | chr1.4:93303-93322 | None:intergenic | 30.0% | |
| AGAATATCTTCCAGCATATT+TGG | + | chr1.4:90527-90546 | MS.gene88960:CDS | 30.0% | |
| AGTACATTTGGATGAAATCA+AGG | - | chr1.4:93291-93310 | None:intergenic | 30.0% | |
| ATACTGGAAATAACAACAAC+AGG | + | chr1.4:90277-90296 | MS.gene88960:CDS | 30.0% | |
| ATATAAACAATCCTGCTACT+TGG | - | chr1.4:91870-91889 | None:intergenic | 30.0% | |
| ATATGGTTAATTCATCTCAG+TGG | + | chr1.4:92008-92027 | MS.gene88960:intron | 30.0% | |
| CATATTTGGATCCAAATCTT+CGG | + | chr1.4:90541-90560 | MS.gene88960:CDS | 30.0% | |
| CTCAGCTTATAATTTCTACA+AGG | + | chr1.4:91067-91086 | MS.gene88960:CDS | 30.0% | |
| GAATATATTGTGAAGCTGAA+AGG | + | chr1.4:90894-90913 | MS.gene88960:CDS | 30.0% | |
| GGATAAATGAAAATCACATG+CGG | + | chr1.4:92630-92649 | MS.gene88960:intron | 30.0% | |
| GTATAAAATATGCAAAGTCC+GGG | - | chr1.4:92515-92534 | None:intergenic | 30.0% | |
| TATAAAATATGCAAAGTCCG+GGG | - | chr1.4:92514-92533 | None:intergenic | 30.0% | |
| TATAAGCTGAGTCTACTAAA+AGG | - | chr1.4:91058-91077 | None:intergenic | 30.0% | |
| TATTCAATGTACCACCAATT+GGG | + | chr1.4:91718-91737 | MS.gene88960:CDS | 30.0% | |
| TCATGCTAATGTACAAAAAG+TGG | + | chr1.4:92172-92191 | MS.gene88960:intron | 30.0% | |
| TCCTTTGACATCAAAAATAG+AGG | + | chr1.4:90617-90636 | MS.gene88960:CDS | 30.0% | |
| TGAAAGGAAATGTATCAACT+AGG | + | chr1.4:91678-91697 | MS.gene88960:intron | 30.0% | |
| ! | CATGACGGAAAATAATTAAC+GGG | - | chr1.4:91185-91204 | None:intergenic | 30.0% |
| ! | GGCAACAAGTATTTTGTAAA+CGG | - | chr1.4:93109-93128 | None:intergenic | 30.0% |
| !! | TTAATTGATAGTGAGAGTTC+AGG | - | chr1.4:92673-92654 | None:intergenic | 30.0% |
| !! | TTAGAGATTGATTTGATCGA+TGG | - | chr1.4:90664-90683 | None:intergenic | 30.0% |
| !!! | ACCTCTATTTTTGATGTCAA+AGG | - | chr1.4:90621-90640 | None:intergenic | 30.0% |
| !!! | AGCTTGCTGAAATTTTTTAG+AGG | - | chr1.4:91158-91177 | None:intergenic | 30.0% |
| !!! | CACTTTTTTTTTTTTGGTGG+TGG | + | chr1.4:92476-92495 | MS.gene88960:intron | 30.0% |
| !!! | GGTAGTTTTATTATTCCACA+CGG | + | chr1.4:91088-91107 | MS.gene88960:intron | 30.0% |
| !!! | GTAGTTTTATTATTCCACAC+GGG | + | chr1.4:91089-91108 | MS.gene88960:intron | 30.0% |
| AAATGTATCAACTAGGTGCA+AGG | + | chr1.4:91685-91704 | MS.gene88960:CDS | 35.0% | |
| ACTAAAAGGTCAGAGTATGA+AGG | - | chr1.4:91044-91063 | None:intergenic | 35.0% | |
| ACTTGGAAAATTCTGCTCAA+AGG | - | chr1.4:91853-91872 | None:intergenic | 35.0% | |
| AGAGTTCAGGAATAAACGTA+AGG | - | chr1.4:92695-92714 | None:intergenic | 35.0% | |
| AGATTTGGATCCAAATATGC+TGG | - | chr1.4:90540-90559 | None:intergenic | 35.0% | |
| AGCTGCCTGCTTATTATATA+AGG | - | chr1.4:90841-90860 | None:intergenic | 35.0% | |
| ATAGTACCTATAAGATCTGC+TGG | - | chr1.4:90390-90409 | None:intergenic | 35.0% | |
| CACTATCAATTAAGAAGCTC+TGG | + | chr1.4:92715-92734 | MS.gene88960:intron | 35.0% | |
| CCTTGAAAATCTTTGCCATA+TGG | - | chr1.4:90330-90349 | None:intergenic | 35.0% | |
| GAAAATCTTTGCCATATGGA+GGG | - | chr1.4:90326-90345 | None:intergenic | 35.0% | |
| GAGTTCAGGAATAAACGTAA+GGG | - | chr1.4:92694-92713 | None:intergenic | 35.0% | |
| GTATTCAATGTACCACCAAT+TGG | + | chr1.4:91717-91736 | MS.gene88960:CDS | 35.0% | |
| TGAAAATCTTTGCCATATGG+AGG | - | chr1.4:90327-90346 | None:intergenic | 35.0% | |
| TGGAAGATTTAGCAATGGAA+AGG | + | chr1.4:90362-90381 | MS.gene88960:CDS | 35.0% | |
| TGTAAAAGTTGGAATGAACC+CGG | - | chr1.4:92744-92763 | None:intergenic | 35.0% | |
| ! | ACTTGCTGAAAACTCATAGA+GGG | + | chr1.4:91539-91558 | MS.gene88960:intron | 35.0% |
| ! | ATGAGTGCACTTAAAAGCAT+GGG | + | chr1.4:91482-91501 | MS.gene88960:intron | 35.0% |
| ! | ATTTTGTAAACGGCTTCAGT+AGG | - | chr1.4:93099-93118 | None:intergenic | 35.0% |
| ! | CCATATGGCAAAGATTTTCA+AGG | + | chr1.4:90327-90346 | MS.gene88960:CDS | 35.0% |
| !! | AACTTGCTGAAAACTCATAG+AGG | + | chr1.4:91538-91557 | MS.gene88960:intron | 35.0% |
| !! | ATGTTTTGTTACTTGTAGGC+CGG | - | chr1.4:92255-92274 | None:intergenic | 35.0% |
| !! | TATGGCAAAGATTTTCAAGG+AGG | + | chr1.4:90330-90349 | MS.gene88960:CDS | 35.0% |
| !!! | TTTTTTTTTTTGGTGGTGGC+CGG | + | chr1.4:92480-92499 | MS.gene88960:intron | 35.0% |
| AAACACATAATCCGAGTCGT+TGG | - | chr1.4:93061-93080 | None:intergenic | 40.0% | |
| AAATCTTCGGCCTAGTGAAT+TGG | + | chr1.4:90554-90573 | MS.gene88960:CDS | 40.0% | |
| AAGGTTCCAGCAGATCTTAT+AGG | + | chr1.4:90381-90400 | MS.gene88960:CDS | 40.0% | |
| AATTCACTAGGCCGAAGATT+TGG | - | chr1.4:90555-90574 | None:intergenic | 40.0% | |
| AGGATCAAATTAAACCCGTG+TGG | - | chr1.4:91106-91125 | None:intergenic | 40.0% | |
| CATGAGTGCACTTAAAAGCA+TGG | + | chr1.4:91481-91500 | MS.gene88960:intron | 40.0% | |
| CCAACTGGAAGATTTAGCAA+TGG | + | chr1.4:90357-90376 | MS.gene88960:CDS | 40.0% | |
| CCATTGCTAAATCTTCCAGT+TGG | - | chr1.4:90360-90379 | None:intergenic | 40.0% | |
| TCATCTGCAAAACCAAACTG+TGG | + | chr1.4:92067-92086 | MS.gene88960:intron | 40.0% | |
| TTTCAAGGAGGAATTCCAAC+TGG | + | chr1.4:90342-90361 | MS.gene88960:CDS | 40.0% | |
| ! | AATTAAGAAGCTCTGGTTGC+CGG | + | chr1.4:92722-92741 | MS.gene88960:intron | 40.0% |
| ! | AGCAGAATTTTCCAAGTAGC+AGG | + | chr1.4:91856-91875 | MS.gene88960:CDS | 40.0% |
| !! | AATTTGCACTGAGTTGGTGT+TGG | - | chr1.4:90303-90322 | None:intergenic | 40.0% |
| !! | ACGACTCGGATTATGTGTTT+TGG | + | chr1.4:93061-93080 | MS.gene88960:CDS | 40.0% |
| !! | CGACTCGGATTATGTGTTTT+GGG | + | chr1.4:93062-93081 | MS.gene88960:CDS | 40.0% |
| !!! | TTTTTTTTTTGGTGGTGGCC+GGG | + | chr1.4:92481-92500 | MS.gene88960:intron | 40.0% |
| AAGTCGTGCCGGAAAACATT+TGG | + | chr1.4:91509-91528 | MS.gene88960:intron | 45.0% | |
| ACACCGGTAACCAATTCACT+AGG | - | chr1.4:90567-90586 | None:intergenic | 45.0% | |
| ACCGGAAGCAAAGTTAACAC+CGG | - | chr1.4:90583-90602 | None:intergenic | 45.0% | |
| CAGTGCAAATTCCCTCCATA+TGG | + | chr1.4:90312-90331 | MS.gene88960:CDS | 45.0% | |
| GCTTCAAAGTTGTAGACCGA+GGG | + | chr1.4:92974-92993 | MS.gene88960:CDS | 45.0% | |
| TGTATCAACTAGGTGCAAGG+AGG | + | chr1.4:91688-91707 | MS.gene88960:CDS | 45.0% | |
| ! | ACCGGTGTTAACTTTGCTTC+CGG | + | chr1.4:90579-90598 | MS.gene88960:CDS | 45.0% |
| ! | ATTAAGAAGCTCTGGTTGCC+GGG | + | chr1.4:92723-92742 | MS.gene88960:intron | 45.0% |
| ! | GTGAAGCTGAAAGGACTAGT+TGG | + | chr1.4:90903-90922 | MS.gene88960:CDS | 45.0% |
| !!! | TTTTTTTTTGGTGGTGGCCG+GGG | + | chr1.4:92482-92501 | MS.gene88960:intron | 45.0% |
| !!! | ATTAATCATTTTTAAAAATA+TGG | + | chr1.4:91991-92010 | MS.gene88960:intron | 5.0% |
| AGGATCATATCCTGCACCAC+CGG | - | chr1.4:90601-90620 | None:intergenic | 50.0% | |
| CAACTAGGTGCAAGGAGGAT+AGG | + | chr1.4:91693-91712 | MS.gene88960:CDS | 50.0% | |
| CGGCCTAGTGAATTGGTTAC+CGG | + | chr1.4:90561-90580 | MS.gene88960:CDS | 50.0% | |
| CGTACCGTTTCAGAGAACAG+TGG | + | chr1.4:91743-91762 | MS.gene88960:CDS | 50.0% | |
| GGAGGGAATTTGCACTGAGT+TGG | - | chr1.4:90309-90328 | None:intergenic | 50.0% | |
| GGCTTCAAAGTTGTAGACCG+AGG | + | chr1.4:92973-92992 | MS.gene88960:intron | 50.0% | |
| GGTGTTAACTTTGCTTCCGG+TGG | + | chr1.4:90582-90601 | MS.gene88960:CDS | 50.0% | |
| TGAAACGGTACGCACCCAAT+TGG | - | chr1.4:91735-91754 | None:intergenic | 50.0% | |
| TTTCAGAGAACAGTGGCTGG+AGG | + | chr1.4:91750-91769 | MS.gene88960:CDS | 50.0% | |
| ! | CCAGCCACTGTTCTCTGAAA+CGG | - | chr1.4:91750-91769 | None:intergenic | 50.0% |
| ! | TGAGCATAGCTCGGTTGGTA+AGG | - | chr1.4:92543-92562 | None:intergenic | 50.0% |
| ! | TGGCACAAGTGGGTTCCAAA+TGG | - | chr1.4:93041-93060 | None:intergenic | 50.0% |
| AAAGTCCGGGGTTCAAACCC+CGG | - | chr1.4:92502-92521 | None:intergenic | 55.0% | |
| AACGGTACGCACCCAATTGG+TGG | - | chr1.4:91732-91751 | None:intergenic | 55.0% | |
| AACTTTGCTTCCGGTGGTGC+AGG | + | chr1.4:90588-90607 | MS.gene88960:CDS | 55.0% | |
| ACCCACTTGTGCCAACGACT+CGG | + | chr1.4:93047-93066 | MS.gene88960:CDS | 55.0% | |
| ATCCGAGTCGTTGGCACAAG+TGG | - | chr1.4:93052-93071 | None:intergenic | 55.0% | |
| CCGTTTCAGAGAACAGTGGC+TGG | + | chr1.4:91747-91766 | MS.gene88960:CDS | 55.0% | |
| GCATGGGAGAAAAGTCGTGC+CGG | + | chr1.4:91498-91517 | MS.gene88960:intron | 55.0% | |
| GTGTCCTCGTGAGCATAGCT+CGG | - | chr1.4:92552-92571 | None:intergenic | 55.0% | |
| TCCGAGTCGTTGGCACAAGT+GGG | - | chr1.4:93051-93070 | None:intergenic | 55.0% | |
| CCAACCGAGCTATGCTCACG+AGG | + | chr1.4:92545-92564 | MS.gene88960:intron | 60.0% | |
| CCTCGTGAGCATAGCTCGGT+TGG | - | chr1.4:92548-92567 | None:intergenic | 60.0% | |
| !! | GTTGTAGACCGAGGGTGCTG+TGG | + | chr1.4:92982-93001 | MS.gene88960:CDS | 60.0% |
| CGCCTGTGCCACAGCACCCT+CGG | - | chr1.4:92993-93012 | None:intergenic | 70.0% | |
| GGTGGCCGGGGTTTGAACCC+CGG | + | chr1.4:92494-92513 | MS.gene88960:intron | 70.0% | |
| !! | GACCGAGGGTGCTGTGGCAC+AGG | + | chr1.4:92988-93007 | MS.gene88960:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 90273 | 93366 | 90273 | ID=MS.gene88960 |
| chr1.4 | mRNA | 90273 | 93366 | 90273 | ID=MS.gene88960.t1;Parent=MS.gene88960 |
| chr1.4 | exon | 90273 | 90402 | 90273 | ID=MS.gene88960.t1.exon1;Parent=MS.gene88960.t1 |
| chr1.4 | CDS | 90273 | 90402 | 90273 | ID=cds.MS.gene88960.t1;Parent=MS.gene88960.t1 |
| chr1.4 | exon | 90508 | 90638 | 90508 | ID=MS.gene88960.t1.exon2;Parent=MS.gene88960.t1 |
| chr1.4 | CDS | 90508 | 90638 | 90508 | ID=cds.MS.gene88960.t1;Parent=MS.gene88960.t1 |
| chr1.4 | exon | 90855 | 91088 | 90855 | ID=MS.gene88960.t1.exon3;Parent=MS.gene88960.t1 |
| chr1.4 | CDS | 90855 | 91088 | 90855 | ID=cds.MS.gene88960.t1;Parent=MS.gene88960.t1 |
| chr1.4 | exon | 91684 | 91939 | 91684 | ID=MS.gene88960.t1.exon4;Parent=MS.gene88960.t1 |
| chr1.4 | CDS | 91684 | 91939 | 91684 | ID=cds.MS.gene88960.t1;Parent=MS.gene88960.t1 |
| chr1.4 | exon | 92974 | 93128 | 92974 | ID=MS.gene88960.t1.exon5;Parent=MS.gene88960.t1 |
| chr1.4 | CDS | 92974 | 93128 | 92974 | ID=cds.MS.gene88960.t1;Parent=MS.gene88960.t1 |
| chr1.4 | exon | 93349 | 93366 | 93349 | ID=MS.gene88960.t1.exon6;Parent=MS.gene88960.t1 |
| chr1.4 | CDS | 93349 | 93366 | 93349 | ID=cds.MS.gene88960.t1;Parent=MS.gene88960.t1 |
| Gene Sequence |
| Protein sequence |
