Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89940.t1 | XP_013459327.1 | 67.3 | 1657 | 261 | 8 | 1 | 1389 | 1 | 1644 | 0.00E+00 | 2113.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89940.t1 | O15050 | 30.1 | 552 | 300 | 16 | 889 | 1373 | 1146 | 1678 | 1.1e-46 | 190.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89940.t1 | G8A365 | 67.3 | 1657 | 261 | 8 | 1 | 1389 | 1 | 1644 | 0.0e+00 | 2113.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene89940 | 0.800429 | 1.45E-48 | -1.69E-46 |
| MS.gene049404 | MS.gene89940 | 0.820263 | 7.52E-53 | -1.69E-46 |
| MS.gene049711 | MS.gene89940 | 0.811666 | 6.25E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene89940 | 0.831088 | 2.03E-55 | -1.69E-46 |
| MS.gene050020 | MS.gene89940 | 0.816567 | 5.17E-52 | -1.69E-46 |
| MS.gene050807 | MS.gene89940 | 0.838585 | 2.64E-57 | -1.69E-46 |
| MS.gene051198 | MS.gene89940 | 0.805256 | 1.46E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene89940 | 0.832433 | 9.48E-56 | -1.69E-46 |
| MS.gene051719 | MS.gene89940 | 0.858097 | 1.04E-62 | -1.69E-46 |
| MS.gene051720 | MS.gene89940 | 0.852465 | 4.53E-61 | -1.69E-46 |
| MS.gene051744 | MS.gene89940 | 0.819465 | 1.15E-52 | -1.69E-46 |
| MS.gene051957 | MS.gene89940 | 0.814635 | 1.39E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene89940 | 0.811726 | 6.06E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene89940 | 0.836874 | 7.24E-57 | -1.69E-46 |
| MS.gene052582 | MS.gene89940 | 0.827815 | 1.27E-54 | -1.69E-46 |
| MS.gene052584 | MS.gene89940 | 0.832974 | 6.96E-56 | -1.69E-46 |
| MS.gene052611 | MS.gene89940 | 0.818188 | 2.23E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene89940 | 0.821244 | 4.48E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene89940 | 0.841141 | 5.69E-58 | -1.69E-46 |
| MS.gene05364 | MS.gene89940 | 0.807287 | 5.44E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene89940 | 0.814197 | 1.74E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene89940 | 0.807735 | 4.37E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene89940 | 0.858223 | 9.55E-63 | -1.69E-46 |
| MS.gene054775 | MS.gene89940 | 0.822741 | 2.01E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene89940 | 0.801171 | 1.02E-48 | -1.69E-46 |
| MS.gene055227 | MS.gene89940 | 0.813529 | 2.44E-51 | -1.69E-46 |
| MS.gene055228 | MS.gene89940 | 0.832435 | 9.47E-56 | -1.69E-46 |
| MS.gene055357 | MS.gene89940 | 0.804444 | 2.15E-49 | -1.69E-46 |
| MS.gene055466 | MS.gene89940 | 0.818862 | 1.57E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene89940 | 0.825423 | 4.73E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene89940 | 0.815166 | 1.06E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene89940 | 0.809907 | 1.50E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene89940 | 0.803921 | 2.77E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene89940 | 0.83575 | 1.40E-56 | -1.69E-46 |
| MS.gene056553 | MS.gene89940 | 0.820965 | 5.19E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene89940 | 0.803891 | 2.81E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene89940 | 0.811736 | 6.03E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene89940 | 0.804795 | 1.82E-49 | -1.69E-46 |
| MS.gene057598 | MS.gene89940 | 0.808296 | 3.32E-50 | -1.69E-46 |
| MS.gene05847 | MS.gene89940 | 0.805095 | 1.57E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene89940 | 0.831982 | 1.23E-55 | -1.69E-46 |
| MS.gene058829 | MS.gene89940 | 0.82122 | 4.53E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene89940 | 0.804398 | 2.20E-49 | -1.69E-46 |
| MS.gene059015 | MS.gene89940 | 0.813093 | 3.05E-51 | -1.69E-46 |
| MS.gene059584 | MS.gene89940 | 0.806804 | 6.89E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene89940 | 0.814172 | 1.76E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene89940 | 0.80682 | 6.83E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene89940 | 0.813186 | 2.91E-51 | -1.69E-46 |
| MS.gene060137 | MS.gene89940 | -0.801032 | 1.09E-48 | -1.69E-46 |
| MS.gene060587 | MS.gene89940 | 0.830058 | 3.64E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89940.t1 | MTR_3g436400 | 85.229 | 765 | 110 | 3 | 625 | 1389 | 883 | 1644 | 0.0 | 1293 |
| MS.gene89940.t1 | MTR_3g436400 | 72.146 | 657 | 170 | 6 | 1 | 655 | 1 | 646 | 0.0 | 942 |
| MS.gene89940.t1 | MTR_0189s0030 | 51.108 | 812 | 329 | 13 | 622 | 1387 | 859 | 1648 | 0.0 | 778 |
| MS.gene89940.t1 | MTR_0189s0030 | 48.910 | 642 | 285 | 14 | 40 | 655 | 1 | 625 | 4.15e-158 | 528 |
| MS.gene89940.t1 | MTR_5g080800 | 43.175 | 630 | 229 | 13 | 622 | 1209 | 125 | 667 | 4.55e-135 | 448 |
| MS.gene89940.t1 | MTR_3g064190 | 34.585 | 639 | 368 | 18 | 17 | 638 | 14 | 619 | 1.50e-94 | 326 |
| MS.gene89940.t1 | MTR_5g076330 | 31.994 | 647 | 373 | 15 | 18 | 638 | 10 | 615 | 6.95e-89 | 310 |
| MS.gene89940.t1 | MTR_5g076440 | 33.083 | 665 | 379 | 19 | 17 | 655 | 21 | 645 | 1.25e-87 | 306 |
| MS.gene89940.t1 | MTR_5g076300 | 30.712 | 674 | 399 | 22 | 17 | 655 | 16 | 656 | 2.73e-80 | 285 |
| MS.gene89940.t1 | MTR_5g076500 | 33.750 | 640 | 371 | 19 | 17 | 638 | 11 | 615 | 6.71e-79 | 280 |
| MS.gene89940.t1 | MTR_5g076310 | 32.394 | 639 | 354 | 20 | 18 | 638 | 17 | 595 | 4.39e-78 | 278 |
| MS.gene89940.t1 | MTR_5g076380 | 31.225 | 743 | 437 | 22 | 17 | 728 | 16 | 715 | 1.30e-74 | 268 |
| MS.gene89940.t1 | MTR_5g076320 | 31.194 | 670 | 352 | 18 | 20 | 638 | 32 | 643 | 1.73e-71 | 258 |
| MS.gene89940.t1 | MTR_3g064210 | 34.500 | 400 | 234 | 11 | 21 | 409 | 16 | 398 | 2.36e-58 | 221 |
| MS.gene89940.t1 | MTR_3g064210 | 34.340 | 265 | 126 | 9 | 407 | 655 | 481 | 713 | 4.47e-26 | 117 |
| MS.gene89940.t1 | MTR_3g064210 | 31.410 | 156 | 99 | 4 | 611 | 759 | 933 | 1087 | 4.89e-13 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89940.t1 | AT1G65810 | 33.491 | 636 | 363 | 17 | 18 | 638 | 22 | 612 | 2.67e-85 | 302 |
| MS.gene89940.t1 | AT1G65810 | 33.491 | 636 | 363 | 17 | 18 | 638 | 22 | 612 | 4.90e-85 | 301 |
| MS.gene89940.t1 | AT1G65810 | 33.491 | 636 | 363 | 17 | 18 | 638 | 22 | 612 | 5.55e-85 | 301 |
| MS.gene89940.t1 | AT1G65780 | 32.424 | 660 | 362 | 18 | 18 | 639 | 11 | 624 | 1.22e-81 | 292 |
| MS.gene89940.t1 | AT1G65780 | 29.651 | 172 | 106 | 5 | 627 | 785 | 870 | 1039 | 3.75e-12 | 72.0 |
| MS.gene89940.t1 | AT5G37150 | 31.522 | 644 | 352 | 17 | 18 | 638 | 9 | 586 | 7.19e-77 | 273 |
| MS.gene89940.t1 | AT5G52090 | 34.375 | 448 | 244 | 9 | 209 | 638 | 8 | 423 | 6.97e-65 | 234 |
| MS.gene89940.t1 | AT5G37140 | 32.421 | 475 | 275 | 11 | 197 | 655 | 12 | 456 | 1.07e-63 | 231 |
| MS.gene89940.t1 | AT4G05540 | 32.046 | 518 | 278 | 17 | 174 | 655 | 27 | 506 | 6.40e-61 | 223 |
| MS.gene89940.t1 | AT5G37160 | 27.854 | 438 | 240 | 13 | 24 | 418 | 24 | 428 | 1.11e-37 | 148 |
| MS.gene89940.t1 | AT5G37030 | 30.591 | 389 | 206 | 11 | 18 | 401 | 9 | 338 | 5.04e-35 | 144 |
| MS.gene89940.t1 | AT5G37030 | 57.377 | 61 | 25 | 1 | 580 | 639 | 348 | 408 | 7.17e-12 | 70.5 |
| MS.gene89940.t1 | AT5G37165 | 44.643 | 112 | 60 | 2 | 545 | 655 | 78 | 188 | 5.28e-20 | 95.1 |
Find 203 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTTCTTGATAAGTTTC+TGG | 0.062862 | 3.4:-36394186 | None:intergenic |
| ATTCTACAATAAAGCTTATT+TGG | 0.079007 | 3.4:+36393480 | MS.gene89940:CDS |
| AAAGATTCTAAAACAATTTA+AGG | 0.080813 | 3.4:+36395935 | MS.gene89940:CDS |
| GCTATTCGTGATTGTCTTTC+TGG | 0.100211 | 3.4:+36393440 | MS.gene89940:CDS |
| GTGGAGACTAGTTTGGTTTA+TGG | 0.141597 | 3.4:+36397813 | MS.gene89940:CDS |
| CCTCCGAATCTGATGATTTA+TGG | 0.150983 | 3.4:+36393363 | MS.gene89940:CDS |
| GTGCAAGGGCCTTCAATTTA+AGG | 0.163196 | 3.4:+36398028 | MS.gene89940:CDS |
| TGCAAATCATTCACTGATTC+AGG | 0.178217 | 3.4:-36392622 | None:intergenic |
| CTCGAGTTTCTTCCAATAAA+TGG | 0.204479 | 3.4:-36392372 | None:intergenic |
| TCTAGAAGATATTTCAAAAT+TGG | 0.224789 | 3.4:+36396046 | MS.gene89940:CDS |
| ATCTTACAAATACCATTTAT+TGG | 0.237606 | 3.4:+36392360 | MS.gene89940:CDS |
| TTCTACAATAAAGCTTATTT+GGG | 0.242111 | 3.4:+36393481 | MS.gene89940:CDS |
| ATTTGTATCTTAACTCATTA+AGG | 0.242316 | 3.4:-36392756 | None:intergenic |
| AAGGCCCTTGCACTCTAAAA+TGG | 0.255682 | 3.4:-36398018 | None:intergenic |
| AACAAAACAAATCGCCAATT+TGG | 0.267389 | 3.4:-36393658 | None:intergenic |
| AACATTACCTGGAGATGTTT+TGG | 0.273184 | 3.4:+36392582 | MS.gene89940:CDS |
| GTGGCTGTTGAAAGCGTTTA+TGG | 0.276768 | 3.4:+36396706 | MS.gene89940:CDS |
| TGGGAACATTGGAGGGTTTA+GGG | 0.280701 | 3.4:+36397914 | MS.gene89940:CDS |
| TGAAGATTTATACAAGAATA+AGG | 0.286280 | 3.4:+36391801 | MS.gene89940:CDS |
| CTCATTCAGGTTGAGAAGAT+TGG | 0.290156 | 3.4:+36392304 | MS.gene89940:intron |
| GTGGGAACATTGGAGGGTTT+AGG | 0.295908 | 3.4:+36397913 | MS.gene89940:CDS |
| TGCAGAGATTTGGAAGGTTT+TGG | 0.306462 | 3.4:+36392641 | MS.gene89940:CDS |
| GCACAACTTCTACTTCCTTT+AGG | 0.312309 | 3.4:+36394329 | MS.gene89940:CDS |
| GTGAATGATTTGCAGAGATT+TGG | 0.313705 | 3.4:+36392631 | MS.gene89940:CDS |
| GAAATAATGTCACATATAAA+AGG | 0.314158 | 3.4:+36397210 | MS.gene89940:CDS |
| AAACTCGGTAATAAACGTTT+TGG | 0.317849 | 3.4:+36395848 | MS.gene89940:CDS |
| TTGTTGGTGACGTTGAGTTC+TGG | 0.325902 | 3.4:+36396796 | MS.gene89940:CDS |
| ATTGTTTGCTGCAAAGAAAA+AGG | 0.328726 | 3.4:+36396113 | MS.gene89940:CDS |
| GCACCTTATGGCAAGGTTGC+AGG | 0.333093 | 3.4:+36392430 | MS.gene89940:CDS |
| TGTGTTCATTGATGAAGTTC+AGG | 0.340598 | 3.4:+36397464 | MS.gene89940:CDS |
| GAATCACTTTGTGGCCAAAT+TGG | 0.349067 | 3.4:+36393644 | MS.gene89940:CDS |
| AACTCTGTCAAGTGAATGTT+TGG | 0.355195 | 3.4:-36394236 | None:intergenic |
| ATACTACCTTTACAACTTCC+AGG | 0.359585 | 3.4:+36394427 | MS.gene89940:CDS |
| TGAGTGTCAACTTTCTTCTA+TGG | 0.366111 | 3.4:+36394477 | MS.gene89940:CDS |
| CTCCGAATCTGATGATTTAT+GGG | 0.370064 | 3.4:+36393364 | MS.gene89940:CDS |
| GCTGCTGTTTACACAACCTT+TGG | 0.373018 | 3.4:-36395818 | None:intergenic |
| GAAGAAATCGTGCGCCTTGT+TGG | 0.377349 | 3.4:+36397975 | MS.gene89940:CDS |
| TGTTCATTTGTTAACTCAAA+TGG | 0.386474 | 3.4:-36396574 | None:intergenic |
| TCTCTTCTTGATAAGTTTCT+GGG | 0.391767 | 3.4:-36394185 | None:intergenic |
| CTGATGTTTGATTTGACATT+GGG | 0.392100 | 3.4:+36397048 | MS.gene89940:CDS |
| AAAGATTTGAATCATCATAC+TGG | 0.394273 | 3.4:+36397133 | MS.gene89940:CDS |
| TTACAATGACTATGGCTTCA+TGG | 0.395001 | 3.4:+36391741 | MS.gene89940:CDS |
| ATCTTTCAATTGCAATGCTC+TGG | 0.395556 | 3.4:-36393960 | None:intergenic |
| CAAGGTTGCAGGACTTAAAC+TGG | 0.396535 | 3.4:+36392441 | MS.gene89940:CDS |
| TAATGCCAGAGGATTCTTCT+TGG | 0.397792 | 3.4:+36394143 | MS.gene89940:CDS |
| CTCATACACCAAGCACCTTA+TGG | 0.398328 | 3.4:+36392418 | MS.gene89940:CDS |
| TCCTTGATTGCAATGTTTGT+TGG | 0.398449 | 3.4:-36393590 | None:intergenic |
| CTGTATAACTTGAATATTGA+AGG | 0.400438 | 3.4:+36392520 | MS.gene89940:CDS |
| GTTGAAGGTGGAGACTAGTT+TGG | 0.400621 | 3.4:+36397806 | MS.gene89940:CDS |
| GAGTCCATCACTCACTATCT+TGG | 0.400903 | 3.4:+36392337 | MS.gene89940:CDS |
| ATTTGGGGTCCTCCTGGGAC+TGG | 0.401612 | 3.4:+36393497 | MS.gene89940:CDS |
| CCAGGTGATATGCTGTTGTT+TGG | 0.401768 | 3.4:+36393683 | MS.gene89940:CDS |
| AATGATAGACTTGATGTTAG+AGG | 0.405269 | 3.4:+36393710 | MS.gene89940:CDS |
| ATATTGAAGGCTGGGAAAAC+AGG | 0.413382 | 3.4:+36392533 | MS.gene89940:CDS |
| AAGCTTATTTGGGGTCCTCC+TGG | 0.417322 | 3.4:+36393491 | MS.gene89940:CDS |
| AAGAAATCGTGCGCCTTGTT+GGG | 0.421241 | 3.4:+36397976 | MS.gene89940:CDS |
| ACCATGTTTCTTCTTTCAAA+AGG | 0.425023 | 3.4:+36396839 | MS.gene89940:CDS |
| TAGGGAAGATCAAGTAATCT+TGG | 0.425862 | 3.4:+36397932 | MS.gene89940:CDS |
| CATGAAGGAAAATAATTTGT+TGG | 0.426320 | 3.4:+36398206 | MS.gene89940:CDS |
| TTGCTTCTTCTCCTTTGAAA+AGG | 0.426422 | 3.4:+36398160 | MS.gene89940:CDS |
| TTCTCCTTTGAAAAGGCGAT+GGG | 0.427960 | 3.4:+36398167 | MS.gene89940:CDS |
| ATTCACTTGACAGAGTTGAT+TGG | 0.429132 | 3.4:+36394242 | MS.gene89940:CDS |
| TTCTGGAGTTTCTGAGAGAA+AGG | 0.429666 | 3.4:+36393930 | MS.gene89940:CDS |
| GGACTGGAGGTGCTACGTTC+AGG | 0.431216 | 3.4:+36395998 | MS.gene89940:CDS |
| CCTAGGAGTACATTTGTACT+AGG | 0.432067 | 3.4:+36396616 | MS.gene89940:CDS |
| AGAATGGCGTGATTGATTCC+TGG | 0.437136 | 3.4:-36394445 | None:intergenic |
| TCCAACAAACATTGCAATCA+AGG | 0.441330 | 3.4:+36393589 | MS.gene89940:CDS |
| AGAAGATTGATCTTACATCT+TGG | 0.442831 | 3.4:-36397602 | None:intergenic |
| GCGCTTCCTGGCCAGCTCAA+TGG | 0.443131 | 3.4:-36396367 | None:intergenic |
| AAGGCGCACGATTTCTTCCT+TGG | 0.446342 | 3.4:-36397970 | None:intergenic |
| GAATTTCCATTGAGCTGGCC+AGG | 0.447514 | 3.4:+36396361 | MS.gene89940:CDS |
| CTAGAGCAAGGAAGAGGTTG+TGG | 0.447577 | 3.4:+36398319 | MS.gene89940:CDS |
| TTGTGAAATGTTATCACAAG+TGG | 0.453309 | 3.4:-36397018 | None:intergenic |
| ATCAATCACGCCATTCTTGT+TGG | 0.455018 | 3.4:+36394451 | MS.gene89940:CDS |
| CTTCTCCTTTGAAAAGGCGA+TGG | 0.455090 | 3.4:+36398166 | MS.gene89940:CDS |
| AGTCCTGCAACCTTGCCATA+AGG | 0.458867 | 3.4:-36392433 | None:intergenic |
| AGAGCGCCTTACAATGACTA+TGG | 0.460983 | 3.4:+36391733 | MS.gene89940:CDS |
| ATTCTAAAACAATTTAAGGT+TGG | 0.461529 | 3.4:+36395939 | MS.gene89940:CDS |
| AGCTTATTTGGGGTCCTCCT+GGG | 0.462087 | 3.4:+36393492 | MS.gene89940:CDS |
| GGGGATACAGCTCAAACAAT+TGG | 0.465389 | 3.4:+36397558 | MS.gene89940:CDS |
| ATCAATTGGGAATTAAAATG+AGG | 0.467717 | 3.4:-36397156 | None:intergenic |
| TTCATAGATTGTATAACAAT+AGG | 0.467858 | 3.4:-36397843 | None:intergenic |
| ATCCCATAAATCATCAGATT+CGG | 0.471434 | 3.4:-36393366 | None:intergenic |
| AATTAAACCATTCTCACCTA+TGG | 0.472466 | 3.4:-36396947 | None:intergenic |
| AGAACATAACTATAGGTACT+TGG | 0.473489 | 3.4:+36394027 | MS.gene89940:CDS |
| TCTGATGTTTGATTTGACAT+TGG | 0.474682 | 3.4:+36397047 | MS.gene89940:CDS |
| TTCAAGAGACGTTGTTTCAA+GGG | 0.474769 | 3.4:+36394077 | MS.gene89940:CDS |
| AAATTCAATTGACATGTTGA+AGG | 0.475198 | 3.4:+36397791 | MS.gene89940:CDS |
| AAGATCAAGTAATCTTGGTA+AGG | 0.476025 | 3.4:+36397937 | MS.gene89940:CDS |
| ACAAGTGGATAAATGTTAGT+TGG | 0.476468 | 3.4:-36397003 | None:intergenic |
| TGCAGGTCCATAGGTGAGAA+TGG | 0.477793 | 3.4:+36396940 | MS.gene89940:intron |
| TAACTTGAATATTGAAGGCT+GGG | 0.481217 | 3.4:+36392525 | MS.gene89940:CDS |
| ATAACTTGAATATTGAAGGC+TGG | 0.484194 | 3.4:+36392524 | MS.gene89940:CDS |
| AGAAACTTTGTGCAGCCTAA+AGG | 0.488611 | 3.4:-36394344 | None:intergenic |
| CCTAGTACAAATGTACTCCT+AGG | 0.488986 | 3.4:-36396616 | None:intergenic |
| TTTCAAGAGACGTTGTTTCA+AGG | 0.489965 | 3.4:+36394076 | MS.gene89940:CDS |
| ACCGGTGTTACGGCAATTGT+TGG | 0.491504 | 3.4:+36396780 | MS.gene89940:CDS |
| AGATCAAGAGACCGGTGTTA+CGG | 0.491548 | 3.4:+36396770 | MS.gene89940:CDS |
| TTGCAAATGGGTGGAGACCT+AGG | 0.492496 | 3.4:+36395877 | MS.gene89940:CDS |
| GTTGAGACAATGAAGGTTGA+AGG | 0.499098 | 3.4:+36398438 | MS.gene89940:CDS |
| GTTAGTTGGAAGATCAGAAA+AGG | 0.499830 | 3.4:-36396989 | None:intergenic |
| TGTTCTAAAATGTGATCCAT+TGG | 0.502725 | 3.4:-36394010 | None:intergenic |
| TGCAAATGGGTGGAGACCTA+GGG | 0.503466 | 3.4:+36395878 | MS.gene89940:CDS |
| ATGAAGCCATAGTCATTGTA+AGG | 0.503755 | 3.4:-36391739 | None:intergenic |
| CTCCTTTGAAAAGGCGATGG+GGG | 0.507076 | 3.4:+36398169 | MS.gene89940:CDS |
| TGGTAGAATTTCCATTGAGC+TGG | 0.507474 | 3.4:+36396356 | MS.gene89940:CDS |
| ACACTCATCGCCAACAAGAA+TGG | 0.508254 | 3.4:-36394461 | None:intergenic |
| CAAGAGCTTGTTTCCCAACA+AGG | 0.511125 | 3.4:-36397989 | None:intergenic |
| AATAGGAGAATAATGGAAAG+AGG | 0.511693 | 3.4:+36391694 | None:intergenic |
| TCATGGAGAACGAGATGATA+AGG | 0.512190 | 3.4:+36393867 | MS.gene89940:CDS |
| TTATTTCCTTGCAGGTCCAT+AGG | 0.512817 | 3.4:+36396931 | MS.gene89940:intron |
| TGAACTAAAACAACTGTATG+TGG | 0.514070 | 3.4:+36398290 | MS.gene89940:CDS |
| TTGATTCCTGGAAGTTGTAA+AGG | 0.516880 | 3.4:-36394433 | None:intergenic |
| GTACTAGGTCGGTCAGGTAC+AGG | 0.517698 | 3.4:+36396631 | MS.gene89940:CDS |
| GGTTACAACGGTGGGAACAT+TGG | 0.518954 | 3.4:+36397903 | MS.gene89940:CDS |
| ACAACCTTTGGAATGATCTA+CGG | 0.519590 | 3.4:-36395806 | None:intergenic |
| CAACCTTGCCATAAGGTGCT+TGG | 0.520426 | 3.4:-36392426 | None:intergenic |
| ATCGTTAGAGAATCACTTTG+TGG | 0.523252 | 3.4:+36393635 | MS.gene89940:CDS |
| CAATAGAGATAGTGAAGGAC+TGG | 0.523411 | 3.4:+36395982 | MS.gene89940:CDS |
| GCCAAAACCAAAACATCTCC+AGG | 0.525677 | 3.4:-36392589 | None:intergenic |
| AAATACCAAGAAGAATCCTC+TGG | 0.527799 | 3.4:-36394148 | None:intergenic |
| ACAACGGTGGGAACATTGGA+GGG | 0.527945 | 3.4:+36397907 | MS.gene89940:CDS |
| TACAACGGTGGGAACATTGG+AGG | 0.535147 | 3.4:+36397906 | MS.gene89940:CDS |
| TCTCGAGAATCGGAAGAAGA+AGG | 0.535386 | 3.4:+36397098 | MS.gene89940:CDS |
| GCAGAAATGGTTACAACGGT+GGG | 0.538108 | 3.4:+36397895 | MS.gene89940:CDS |
| TGTTTCTGATTATCACGTCA+TGG | 0.538639 | 3.4:+36393850 | MS.gene89940:CDS |
| TTCTCTAGTTGAGACAATGA+AGG | 0.539182 | 3.4:+36398431 | MS.gene89940:CDS |
| CTTTAACTAGAGCAAGGAAG+AGG | 0.541846 | 3.4:+36398313 | MS.gene89940:CDS |
| TCATCAGATTACACACGTAC+TGG | 0.542902 | 3.4:+36396526 | MS.gene89940:CDS |
| ACAACCGTGTTCAACAGCTC+AGG | 0.547925 | 3.4:+36393759 | MS.gene89940:CDS |
| TTCAATTGACATGTTGAAGG+TGG | 0.552139 | 3.4:+36397794 | MS.gene89940:CDS |
| TTGATCTCCATCGTAGGTTG+AGG | 0.553047 | 3.4:+36397409 | MS.gene89940:CDS |
| ACGTTCAGGTTCTCAAGATG+TGG | 0.553409 | 3.4:+36396012 | MS.gene89940:CDS |
| ACATTTGTACTAGGTCGGTC+AGG | 0.555065 | 3.4:+36396625 | MS.gene89940:CDS |
| TGCTGTTGAGATCAAGAGAC+CGG | 0.556431 | 3.4:+36396762 | MS.gene89940:CDS |
| ATTGTTATACAATCTATGAA+TGG | 0.556649 | 3.4:+36397846 | MS.gene89940:CDS |
| GAGCCGTATAAAACATTACC+TGG | 0.556713 | 3.4:+36392571 | MS.gene89940:CDS |
| GTTATGCACTCATTTACCAA+TGG | 0.567750 | 3.4:+36393994 | MS.gene89940:CDS |
| CGTCTCTTGAAATGAGTCAA+GGG | 0.569100 | 3.4:-36394065 | None:intergenic |
| TGGAAAGGCTTGCAAATGGG+TGG | 0.571283 | 3.4:+36395868 | MS.gene89940:CDS |
| GGCAGAAATGGTTACAACGG+TGG | 0.572779 | 3.4:+36397894 | MS.gene89940:CDS |
| AGCATAAAAGCAGCTGAGAG+TGG | 0.574731 | 3.4:+36397234 | MS.gene89940:CDS |
| ATTTCGACACTACGTCCCCT+AGG | 0.576847 | 3.4:-36395894 | None:intergenic |
| ATTTGTAGAAATGTTGAAGA+GGG | 0.580895 | 3.4:+36397522 | MS.gene89940:CDS |
| TTAAGTTACCATCAGTGATG+TGG | 0.580963 | 3.4:-36392837 | None:intergenic |
| TTGAAGAGACTAGGAACGAA+AGG | 0.581501 | 3.4:+36393890 | MS.gene89940:CDS |
| GAAGAGGTTGTGGATTTGTG+AGG | 0.581622 | 3.4:+36398329 | MS.gene89940:CDS |
| AAATATCTTCTAGAGGCACT+AGG | 0.584691 | 3.4:-36396037 | None:intergenic |
| GTAAAATAGTTACCTTCCCT+AGG | 0.586024 | 3.4:+36396599 | MS.gene89940:CDS |
| AGATCAAGTAATCTTGGTAA+GGG | 0.588630 | 3.4:+36397938 | MS.gene89940:CDS |
| TACAGCTCAAACAATTGGAA+GGG | 0.590099 | 3.4:+36397563 | MS.gene89940:CDS |
| ATGATTTGCAGAGATTTGGA+AGG | 0.593297 | 3.4:+36392635 | MS.gene89940:CDS |
| AGCAACTCTATGCTCAAGCA+TGG | 0.595501 | 3.4:+36392393 | MS.gene89940:CDS |
| CTGTAATCTAATAATGCCAG+AGG | 0.597320 | 3.4:+36394132 | MS.gene89940:CDS |
| CTAGTACAAATGTACTCCTA+GGG | 0.598368 | 3.4:-36396615 | None:intergenic |
| GGAGTACATTTGTACTAGGT+CGG | 0.598595 | 3.4:+36396620 | MS.gene89940:CDS |
| ACCAACAATTGCCGTAACAC+CGG | 0.598855 | 3.4:-36396781 | None:intergenic |
| CCAAACAACAGCATATCACC+TGG | 0.607452 | 3.4:-36393683 | None:intergenic |
| ACGTCTCTTGAAATGAGTCA+AGG | 0.607988 | 3.4:-36394066 | None:intergenic |
| AGATCCAAGATAGTGAGTGA+TGG | 0.608358 | 3.4:-36392341 | None:intergenic |
| CAACCGTGTTCAACAGCTCA+GGG | 0.609826 | 3.4:+36393760 | MS.gene89940:CDS |
| GGTGATTTAGTTGAGTCTGA+AGG | 0.610182 | 3.4:+36396436 | MS.gene89940:CDS |
| ATAGTGAGTGATGGACTCAA+AGG | 0.612036 | 3.4:-36392332 | None:intergenic |
| GAGGTTGTGGATTTGTGAGG+AGG | 0.612974 | 3.4:+36398332 | MS.gene89940:CDS |
| TCTACAATAAAGCTTATTTG+GGG | 0.616573 | 3.4:+36393482 | MS.gene89940:CDS |
| TTGTAATTGATCTCCATCGT+AGG | 0.618294 | 3.4:+36397403 | MS.gene89940:CDS |
| GAGTGGTAAGCTGAGTCGTG+AGG | 0.620826 | 3.4:+36397251 | MS.gene89940:CDS |
| ACAGCTCAAACAATTGGAAG+GGG | 0.621908 | 3.4:+36397564 | MS.gene89940:CDS |
| CATTTGTAGAAATGTTGAAG+AGG | 0.622542 | 3.4:+36397521 | MS.gene89940:CDS |
| TGGACAGGAGATGAGAATGA+TGG | 0.622617 | 3.4:+36392682 | MS.gene89940:CDS |
| AGTGGACTCCACATCACTGA+TGG | 0.622726 | 3.4:+36392829 | MS.gene89940:CDS |
| ATACAGCTCAAACAATTGGA+AGG | 0.624276 | 3.4:+36397562 | MS.gene89940:CDS |
| TGAGAATGATGGTGAGAACG+TGG | 0.627136 | 3.4:+36392693 | MS.gene89940:CDS |
| ATGATAAGGTTGAAGAGACT+AGG | 0.628362 | 3.4:+36393881 | MS.gene89940:CDS |
| AGTTGGTACTACTAATACAA+CGG | 0.629327 | 3.4:+36396411 | MS.gene89940:CDS |
| TTTCGGTCCTCAACCTACGA+TGG | 0.629683 | 3.4:-36397416 | None:intergenic |
| ATGTGGCTTTAACTAGAGCA+AGG | 0.630690 | 3.4:+36398307 | MS.gene89940:CDS |
| GGTACTACTAATACAACGGA+GGG | 0.631396 | 3.4:+36396415 | MS.gene89940:CDS |
| TCTCCTTTGAAAAGGCGATG+GGG | 0.633135 | 3.4:+36398168 | MS.gene89940:CDS |
| AGGAGAATAATGGAAAGAGG+AGG | 0.633587 | 3.4:+36391697 | None:intergenic |
| TACAAATGTACTCCTAGGGA+AGG | 0.633656 | 3.4:-36396611 | None:intergenic |
| TTTGGCAGAAATGGTTACAA+CGG | 0.635872 | 3.4:+36397891 | MS.gene89940:CDS |
| ACACCAAGCACCTTATGGCA+AGG | 0.637539 | 3.4:+36392423 | MS.gene89940:CDS |
| TTTGTGCAACGACGATGATG+GGG | 0.637784 | 3.4:+36392876 | MS.gene89940:CDS |
| CGTTCAGGTTCTCAAGATGT+GGG | 0.638090 | 3.4:+36396013 | MS.gene89940:CDS |
| CCATAAATCATCAGATTCGG+AGG | 0.638599 | 3.4:-36393363 | None:intergenic |
| GATTATATATGAGTACATGA+AGG | 0.640035 | 3.4:+36398191 | MS.gene89940:CDS |
| AATTCCGTAGATCATTCCAA+AGG | 0.644231 | 3.4:+36395802 | MS.gene89940:CDS |
| TGGCCGTGATGATATTGAAG+TGG | 0.647843 | 3.4:+36396546 | MS.gene89940:CDS |
| TAGAGATAGTGAAGGACTGG+AGG | 0.648090 | 3.4:+36395985 | MS.gene89940:CDS |
| AATCCCTGAGCTGTTGAACA+CGG | 0.653387 | 3.4:-36393763 | None:intergenic |
| AAATGAGAAAATACACCATG+TGG | 0.657753 | 3.4:+36396687 | MS.gene89940:CDS |
| AAACGCTTTCAACAGCCACA+TGG | 0.667918 | 3.4:-36396702 | None:intergenic |
| AATCCACTTCAATATCATCA+CGG | 0.668379 | 3.4:-36396549 | None:intergenic |
| ACGTGTGTAATCTGATGAGA+TGG | 0.672131 | 3.4:-36396521 | None:intergenic |
| ATGTTTGGCAATTTCCAATG+CGG | 0.677835 | 3.4:-36394221 | None:intergenic |
| GAACTTTAGTACTCATGCCG+AGG | 0.678831 | 3.4:+36397719 | MS.gene89940:CDS |
| GGTAAGGGATGATTCTACCA+AGG | 0.679324 | 3.4:+36397953 | MS.gene89940:CDS |
| GTGTTCAATAGAGATAGTGA+AGG | 0.681869 | 3.4:+36395977 | MS.gene89940:CDS |
| TGAAGTTCAGGATCTAACAA+TGG | 0.689609 | 3.4:+36397476 | MS.gene89940:CDS |
| GCAAATGGGTGGAGACCTAG+GGG | 0.697076 | 3.4:+36395879 | MS.gene89940:CDS |
| TGGTACTACTAATACAACGG+AGG | 0.701416 | 3.4:+36396414 | MS.gene89940:CDS |
| GAAAACAGGTTTATTCATCG+AGG | 0.710932 | 3.4:+36392547 | MS.gene89940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATCTTGTATTAAAAATTA+AGG | + | chr3.4:36391850-36391869 | MS.gene89940:intron | 10.0% |
| !! | AGGAAATAAATTAAATTATG+AGG | - | chr3.4:36396920-36396939 | None:intergenic | 15.0% |
| !! | TTGCTATAAAAATATGAATT+TGG | - | chr3.4:36394720-36394739 | None:intergenic | 15.0% |
| !! | TTTAATACAAGATAAAATGT+AGG | - | chr3.4:36391845-36391864 | None:intergenic | 15.0% |
| !! | TTTAGATAATTTAGATTTGA+CGG | - | chr3.4:36391948-36391967 | None:intergenic | 15.0% |
| !!! | AAAGATTCTAAAACAATTTA+AGG | + | chr3.4:36395935-36395954 | MS.gene89940:CDS | 15.0% |
| !!! | GATTTTATTTTATGTATGAT+GGG | + | chr3.4:36393312-36393331 | MS.gene89940:intron | 15.0% |
| !!! | TGATTTTATTTTATGTATGA+TGG | + | chr3.4:36393311-36393330 | MS.gene89940:intron | 15.0% |
| !!! | TTAAATTTTAGTTACAGTTA+TGG | + | chr3.4:36396199-36396218 | MS.gene89940:intron | 15.0% |
| !!! | TTTTAAAAACCTTAAATTGA+AGG | - | chr3.4:36398040-36398059 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAAATCATTGCT+AGG | + | chr3.4:36395368-36395387 | MS.gene89940:intron | 15.0% |
| !! | AAACCATTTAACAACAAAAA+CGG | + | chr3.4:36392466-36392485 | MS.gene89940:CDS | 20.0% |
| !! | AATAGATAGACACAAAATTA+AGG | - | chr3.4:36392281-36392300 | None:intergenic | 20.0% |
| !! | AGTATATAAGTGAAACTATT+TGG | - | chr3.4:36392991-36393010 | None:intergenic | 20.0% |
| !! | ATCTTACAAATACCATTTAT+TGG | + | chr3.4:36392360-36392379 | MS.gene89940:CDS | 20.0% |
| !! | ATTCTACAATAAAGCTTATT+TGG | + | chr3.4:36393480-36393499 | MS.gene89940:CDS | 20.0% |
| !! | ATTGTTATACAATCTATGAA+TGG | + | chr3.4:36397846-36397865 | MS.gene89940:CDS | 20.0% |
| !! | ATTTGTATCTTAACTCATTA+AGG | - | chr3.4:36392759-36392778 | None:intergenic | 20.0% |
| !! | GAAATAATGTCACATATAAA+AGG | + | chr3.4:36397210-36397229 | MS.gene89940:CDS | 20.0% |
| !! | TCACAAATGACAAATAAAAA+TGG | - | chr3.4:36394566-36394585 | None:intergenic | 20.0% |
| !! | TCTACAATAATCTCATAATT+TGG | + | chr3.4:36396871-36396890 | MS.gene89940:intron | 20.0% |
| !! | TCTAGAAGATATTTCAAAAT+TGG | + | chr3.4:36396046-36396065 | MS.gene89940:CDS | 20.0% |
| !! | TGAAGATTTATACAAGAATA+AGG | + | chr3.4:36391801-36391820 | MS.gene89940:CDS | 20.0% |
| !! | TGTACTTCATAAATTATATG+CGG | - | chr3.4:36394975-36394994 | None:intergenic | 20.0% |
| !! | TTCATAGATTGTATAACAAT+AGG | - | chr3.4:36397846-36397865 | None:intergenic | 20.0% |
| !! | TTCTACAATAAAGCTTATTT+GGG | + | chr3.4:36393481-36393500 | MS.gene89940:CDS | 20.0% |
| !! | TTGGATCTTATAGAAAAATA+TGG | + | chr3.4:36392806-36392825 | MS.gene89940:CDS | 20.0% |
| !! | TTTGAAAGGTTAAGTTTATT+TGG | + | chr3.4:36394636-36394655 | MS.gene89940:intron | 20.0% |
| !!! | AATTTAATTTATTTCCTTGC+AGG | + | chr3.4:36396923-36396942 | MS.gene89940:intron | 20.0% |
| !!! | AATTTTGAAATATCTTCTAG+AGG | - | chr3.4:36396047-36396066 | None:intergenic | 20.0% |
| !!! | ACATTTTAGAACATAACTAT+AGG | + | chr3.4:36394020-36394039 | MS.gene89940:CDS | 20.0% |
| !!! | ATGTATAAATCTTTATTTGC+TGG | + | chr3.4:36392026-36392045 | MS.gene89940:intron | 20.0% |
| !!! | ATTCTAAAACAATTTAAGGT+TGG | + | chr3.4:36395939-36395958 | MS.gene89940:CDS | 20.0% |
| !!! | CAAGTTATACAGTTTATTTT+TGG | - | chr3.4:36392512-36392531 | None:intergenic | 20.0% |
| !!! | CAATGTTTTATGTTTTTTTC+CGG | + | chr3.4:36398105-36398124 | MS.gene89940:intron | 20.0% |
| !!! | TTATACAGTTTATTTTTGGA+CGG | - | chr3.4:36392508-36392527 | None:intergenic | 20.0% |
| ! | AAAAAGAATGAGAAGATGAA+AGG | + | chr3.4:36397666-36397685 | MS.gene89940:CDS | 25.0% |
| ! | AAAGATTTGAATCATCATAC+TGG | + | chr3.4:36397133-36397152 | MS.gene89940:CDS | 25.0% |
| ! | AAATTAAGGTAAAGTACATG+TGG | - | chr3.4:36392267-36392286 | None:intergenic | 25.0% |
| ! | AAATTCAATTGACATGTTGA+AGG | + | chr3.4:36397791-36397810 | MS.gene89940:CDS | 25.0% |
| ! | ACAATTTATCTGAGTTCATT+CGG | - | chr3.4:36396178-36396197 | None:intergenic | 25.0% |
| ! | ACTATGAAAAAATGAAGATG+CGG | + | chr3.4:36397355-36397374 | MS.gene89940:CDS | 25.0% |
| ! | ACTGGAAAAACAAAAACTTT+AGG | + | chr3.4:36393515-36393534 | MS.gene89940:CDS | 25.0% |
| ! | AGATTGATCTAATTCTTTCA+TGG | - | chr3.4:36395536-36395555 | None:intergenic | 25.0% |
| ! | ATCAATTGGGAATTAAAATG+AGG | - | chr3.4:36397159-36397178 | None:intergenic | 25.0% |
| ! | ATTTGTAGAAATGTTGAAGA+GGG | + | chr3.4:36397522-36397541 | MS.gene89940:CDS | 25.0% |
| ! | CAAAAATATAAGGAAATTGC+AGG | - | chr3.4:36391908-36391927 | None:intergenic | 25.0% |
| ! | CTGTATAACTTGAATATTGA+AGG | + | chr3.4:36392520-36392539 | MS.gene89940:CDS | 25.0% |
| ! | GATTATATATGAGTACATGA+AGG | + | chr3.4:36398191-36398210 | MS.gene89940:CDS | 25.0% |
| ! | GCAACATTTATGAAAGAATA+GGG | - | chr3.4:36394813-36394832 | None:intergenic | 25.0% |
| ! | GTGTGTAAAATTGATATTGT+TGG | + | chr3.4:36392116-36392135 | MS.gene89940:intron | 25.0% |
| ! | TAACACATCCTAAAAAATTC+CGG | - | chr3.4:36398127-36398146 | None:intergenic | 25.0% |
| ! | TACTAAAACTGTAACAACAA+AGG | - | chr3.4:36393098-36393117 | None:intergenic | 25.0% |
| ! | TAGCTAAAAATGACAATGTT+TGG | + | chr3.4:36395425-36395444 | MS.gene89940:intron | 25.0% |
| ! | TATTCTTTCATAAATGTTGC+CGG | + | chr3.4:36394813-36394832 | MS.gene89940:intron | 25.0% |
| ! | TCTACAATAAAGCTTATTTG+GGG | + | chr3.4:36393482-36393501 | MS.gene89940:CDS | 25.0% |
| ! | TCTATCTATTTATCTCATTC+AGG | + | chr3.4:36392291-36392310 | MS.gene89940:intron | 25.0% |
| ! | TCTTATAGAAAAATATGGAG+TGG | + | chr3.4:36392811-36392830 | MS.gene89940:CDS | 25.0% |
| ! | TGCTGAAAAATCAATGATTA+AGG | + | chr3.4:36396471-36396490 | MS.gene89940:CDS | 25.0% |
| !! | AAATGAATTTTTATCCGCAT+TGG | + | chr3.4:36394207-36394226 | MS.gene89940:CDS | 25.0% |
| !! | AATCCAACTTTTTGATCAAT+TGG | - | chr3.4:36397173-36397192 | None:intergenic | 25.0% |
| !! | AGAATCTAAAAGTCAGTTTT+TGG | + | chr3.4:36397641-36397660 | MS.gene89940:CDS | 25.0% |
| !! | AGATATCGAAGATATTTTCT+TGG | + | chr3.4:36393736-36393755 | MS.gene89940:CDS | 25.0% |
| !! | ATCCAACTTTTTGATCAATT+GGG | - | chr3.4:36397172-36397191 | None:intergenic | 25.0% |
| !! | ATGACCATAATTTTGAATTC+TGG | + | chr3.4:36392148-36392167 | MS.gene89940:intron | 25.0% |
| !! | CATGAAGGAAAATAATTTGT+TGG | + | chr3.4:36398206-36398225 | MS.gene89940:CDS | 25.0% |
| !! | CTGCAATTTCCTTATATTTT+TGG | + | chr3.4:36391906-36391925 | MS.gene89940:intron | 25.0% |
| !! | TGTTCATTTGTTAACTCAAA+TGG | - | chr3.4:36396577-36396596 | None:intergenic | 25.0% |
| !! | TTTTCCCAATAAGAAAACAT+GGG | - | chr3.4:36398378-36398397 | None:intergenic | 25.0% |
| !!! | AAACATTGTCATTTTTAGCT+AGG | - | chr3.4:36395426-36395445 | None:intergenic | 25.0% |
| !!! | AACATTGTCATTTTTAGCTA+GGG | - | chr3.4:36395425-36395444 | None:intergenic | 25.0% |
| !!! | GTTTTTTTCCGGAATTTTTT+AGG | + | chr3.4:36398116-36398135 | MS.gene89940:intron | 25.0% |
| !!! | TATACAGTTTATTTTTGGAC+GGG | - | chr3.4:36392507-36392526 | None:intergenic | 25.0% |
| !!! | TCATGGATTTGATTTTTTCT+TGG | + | chr3.4:36391758-36391777 | MS.gene89940:CDS | 25.0% |
| !!! | TGACATATACTTACTTTTCT+TGG | + | chr3.4:36394997-36395016 | MS.gene89940:intron | 25.0% |
| !!! | TGTGATTGTTGTTTGTTTTA+AGG | + | chr3.4:36394581-36394600 | MS.gene89940:intron | 25.0% |
| !!! | TTACCGTTTTTGTTGTTAAA+TGG | - | chr3.4:36392472-36392491 | None:intergenic | 25.0% |
| AAAGAAAAATCCACGATTCT+TGG | - | chr3.4:36395470-36395489 | None:intergenic | 30.0% | |
| AAATGAGAAAATACACCATG+TGG | + | chr3.4:36396687-36396706 | MS.gene89940:CDS | 30.0% | |
| AAATTCAAGAGAAACTAGCA+AGG | + | chr3.4:36395092-36395111 | MS.gene89940:intron | 30.0% | |
| AACAAAACAAATCGCCAATT+TGG | - | chr3.4:36393661-36393680 | None:intergenic | 30.0% | |
| AACAAATGTAGCTCTTACAA+GGG | + | chr3.4:36395258-36395277 | MS.gene89940:intron | 30.0% | |
| AAGATCAAGTAATCTTGGTA+AGG | + | chr3.4:36397937-36397956 | MS.gene89940:CDS | 30.0% | |
| AATCCACTTCAATATCATCA+CGG | - | chr3.4:36396552-36396571 | None:intergenic | 30.0% | |
| AATGATAGACTTGATGTTAG+AGG | + | chr3.4:36393710-36393729 | MS.gene89940:CDS | 30.0% | |
| AATTAAACCATTCTCACCTA+TGG | - | chr3.4:36396950-36396969 | None:intergenic | 30.0% | |
| AATTCAAGAGAAACTAGCAA+GGG | + | chr3.4:36395093-36395112 | MS.gene89940:intron | 30.0% | |
| ACAAGTGGATAAATGTTAGT+TGG | - | chr3.4:36397006-36397025 | None:intergenic | 30.0% | |
| ACCATGTTTCTTCTTTCAAA+AGG | + | chr3.4:36396839-36396858 | MS.gene89940:CDS | 30.0% | |
| AGAACATAACTATAGGTACT+TGG | + | chr3.4:36394027-36394046 | MS.gene89940:CDS | 30.0% | |
| AGAAGATTGATCTTACATCT+TGG | - | chr3.4:36397605-36397624 | None:intergenic | 30.0% | |
| AGATCAAGTAATCTTGGTAA+GGG | + | chr3.4:36397938-36397957 | MS.gene89940:CDS | 30.0% | |
| ATAAACTTCTACACTTCTTC+AGG | + | chr3.4:36395764-36395783 | MS.gene89940:intron | 30.0% | |
| ATAACTTGAATATTGAAGGC+TGG | + | chr3.4:36392524-36392543 | MS.gene89940:CDS | 30.0% | |
| ATACTGAAGAATTTGCACAA+AGG | + | chr3.4:36394906-36394925 | MS.gene89940:intron | 30.0% | |
| ATCCAAAAACTTAAGAGAGT+TGG | + | chr3.4:36396394-36396413 | MS.gene89940:CDS | 30.0% | |
| ATCCCATAAATCATCAGATT+CGG | - | chr3.4:36393369-36393388 | None:intergenic | 30.0% | |
| ATGACTGTAGATATCCAAAA+CGG | + | chr3.4:36392073-36392092 | MS.gene89940:intron | 30.0% | |
| CATTTGTAGAAATGTTGAAG+AGG | + | chr3.4:36397521-36397540 | MS.gene89940:CDS | 30.0% | |
| CGGAAGAAGTTATAAGAATA+TGG | + | chr3.4:36394860-36394879 | MS.gene89940:intron | 30.0% | |
| GGCAACATTTATGAAAGAAT+AGG | - | chr3.4:36394814-36394833 | None:intergenic | 30.0% | |
| GTAAGCATATTGAAACAGTT+CGG | + | chr3.4:36395326-36395345 | MS.gene89940:intron | 30.0% | |
| GTGAATGTGAAATCAATTGA+TGG | + | chr3.4:36395145-36395164 | MS.gene89940:intron | 30.0% | |
| TAAAACTGTAACAACAAAGG+TGG | - | chr3.4:36393095-36393114 | None:intergenic | 30.0% | |
| TAACTTGAATATTGAAGGCT+GGG | + | chr3.4:36392525-36392544 | MS.gene89940:CDS | 30.0% | |
| TAGAGTCAAATAATCTGCAT+AGG | + | chr3.4:36393195-36393214 | MS.gene89940:intron | 30.0% | |
| TCATCTTCAGAAATACAATG+TGG | + | chr3.4:36395581-36395600 | MS.gene89940:intron | 30.0% | |
| TCTCTTCTTGATAAGTTTCT+GGG | - | chr3.4:36394188-36394207 | None:intergenic | 30.0% | |
| TGAACTAAAACAACTGTATG+TGG | + | chr3.4:36398290-36398309 | MS.gene89940:CDS | 30.0% | |
| TTCCCAATTGATCAAAAAGT+TGG | + | chr3.4:36397167-36397186 | MS.gene89940:CDS | 30.0% | |
| TTCTCTTCTTGATAAGTTTC+TGG | - | chr3.4:36394189-36394208 | None:intergenic | 30.0% | |
| TTGTGAAATGTTATCACAAG+TGG | - | chr3.4:36397021-36397040 | None:intergenic | 30.0% | |
| TTTGGAAACAAGCTTATTTC+TGG | - | chr3.4:36394702-36394721 | None:intergenic | 30.0% | |
| ! | AAACTCGGTAATAAACGTTT+TGG | + | chr3.4:36395848-36395867 | MS.gene89940:CDS | 30.0% |
| ! | AAATCAATTGATGGTTTCCA+AGG | + | chr3.4:36395154-36395173 | MS.gene89940:intron | 30.0% |
| ! | AATCCGATTCTGACAATTTT+TGG | + | chr3.4:36397873-36397892 | MS.gene89940:CDS | 30.0% |
| ! | ACCAATATAACTGTTTTCAG+GGG | + | chr3.4:36392172-36392191 | MS.gene89940:intron | 30.0% |
| ! | AGTTGGTACTACTAATACAA+CGG | + | chr3.4:36396411-36396430 | MS.gene89940:CDS | 30.0% |
| ! | ATTGTTTGCTGCAAAGAAAA+AGG | + | chr3.4:36396113-36396132 | MS.gene89940:CDS | 30.0% |
| ! | CACCAATATAACTGTTTTCA+GGG | + | chr3.4:36392171-36392190 | MS.gene89940:intron | 30.0% |
| ! | CTTTTCCCAATAAGAAAACA+TGG | - | chr3.4:36398379-36398398 | None:intergenic | 30.0% |
| ! | TAAGCCCATGTTTTCTTATT+GGG | + | chr3.4:36398371-36398390 | MS.gene89940:CDS | 30.0% |
| ! | TACATCACCCTTGTATTTTT+CGG | - | chr3.4:36397436-36397455 | None:intergenic | 30.0% |
| ! | TACCAACTCTCTTAAGTTTT+TGG | - | chr3.4:36396399-36396418 | None:intergenic | 30.0% |
| ! | TATGAAGCCAATGAACTTTT+TGG | + | chr3.4:36394366-36394385 | MS.gene89940:CDS | 30.0% |
| ! | TCTCCAGGTAATGTTTTATA+CGG | - | chr3.4:36392577-36392596 | None:intergenic | 30.0% |
| ! | TTCTTCTTTCAAAAGGTATG+CGG | + | chr3.4:36396846-36396865 | MS.gene89940:intron | 30.0% |
| ! | TTTAAGGTTTGTAATGAAGC+TGG | + | chr3.4:36394597-36394616 | MS.gene89940:intron | 30.0% |
| ! | TTTTTGACAATTGTATGGAC+AGG | + | chr3.4:36392667-36392686 | MS.gene89940:CDS | 30.0% |
| !! | AAAGATAGCTTTAGCCATTT+CGG | - | chr3.4:36395509-36395528 | None:intergenic | 30.0% |
| !! | ACCTTTTGAAAGAAGAAACA+TGG | - | chr3.4:36396843-36396862 | None:intergenic | 30.0% |
| !! | AGGCATTGTTTATGGATTTT+GGG | + | chr3.4:36395388-36395407 | MS.gene89940:intron | 30.0% |
| !! | CTGATGTTTGATTTGACATT+GGG | + | chr3.4:36397048-36397067 | MS.gene89940:CDS | 30.0% |
| !! | GAACTAGTTGATGATGAAAT+TGG | + | chr3.4:36393279-36393298 | MS.gene89940:intron | 30.0% |
| !! | GATTGTTTTTCGACTTATAC+TGG | + | chr3.4:36393782-36393801 | MS.gene89940:CDS | 30.0% |
| !! | GCAAAGAAAAAGGTTTTGAT+GGG | + | chr3.4:36396123-36396142 | MS.gene89940:CDS | 30.0% |
| !! | GTTGTTTTCTTGACAAATGT+TGG | + | chr3.4:36392787-36392806 | MS.gene89940:CDS | 30.0% |
| !! | TAGGCATTGTTTATGGATTT+TGG | + | chr3.4:36395387-36395406 | MS.gene89940:intron | 30.0% |
| !! | TCTGATGTTTGATTTGACAT+TGG | + | chr3.4:36397047-36397066 | MS.gene89940:CDS | 30.0% |
| !! | TCTTCTTGGTATTTTGAGAA+TGG | + | chr3.4:36394157-36394176 | MS.gene89940:CDS | 30.0% |
| !! | TGATTTTTCAGCAGCATTAT+TGG | - | chr3.4:36396464-36396483 | None:intergenic | 30.0% |
| !! | TGCAAAGAAAAAGGTTTTGA+TGG | + | chr3.4:36396122-36396141 | MS.gene89940:CDS | 30.0% |
| !! | TGTTCTAAAATGTGATCCAT+TGG | - | chr3.4:36394013-36394032 | None:intergenic | 30.0% |
| !! | TTTTATGTATGATGGGAAAC+AGG | + | chr3.4:36393319-36393338 | MS.gene89940:intron | 30.0% |
| !!! | GGTGTTTTTTGACAATTGTA+TGG | + | chr3.4:36392662-36392681 | MS.gene89940:CDS | 30.0% |
| !!! | TGAACTGCACATTTTAACTT+CGG | + | chr3.4:36391969-36391988 | MS.gene89940:intron | 30.0% |
| !!! | TTAACCATTTTAGAGTGCAA+GGG | + | chr3.4:36398014-36398033 | MS.gene89940:CDS | 30.0% |
| !!! | TTTAACCATTTTAGAGTGCA+AGG | + | chr3.4:36398013-36398032 | MS.gene89940:CDS | 30.0% |
| !!! | TTTGTAATGAAGCTGGTTTT+GGG | + | chr3.4:36394604-36394623 | MS.gene89940:intron | 30.0% |
| AAAGAATAGGGACCATACAT+TGG | - | chr3.4:36394801-36394820 | None:intergenic | 35.0% | |
| AAATACCAAGAAGAATCCTC+TGG | - | chr3.4:36394151-36394170 | None:intergenic | 35.0% | |
| AACTCTGTCAAGTGAATGTT+TGG | - | chr3.4:36394239-36394258 | None:intergenic | 35.0% | |
| AATTCCGTAGATCATTCCAA+AGG | + | chr3.4:36395802-36395821 | MS.gene89940:CDS | 35.0% | |
| ACCCCTGAAAACAGTTATAT+TGG | - | chr3.4:36392176-36392195 | None:intergenic | 35.0% | |
| AGAAATACAATGTGGAAGGT+GGG | + | chr3.4:36395589-36395608 | MS.gene89940:intron | 35.0% | |
| AGAGAATAGAGTCATAGTTC+TGG | - | chr3.4:36396305-36396324 | None:intergenic | 35.0% | |
| AGAGCTACATTTGTTCTTTG+CGG | - | chr3.4:36395253-36395272 | None:intergenic | 35.0% | |
| AGTTAAGTCTCAGATGAGTT+GGG | - | chr3.4:36393034-36393053 | None:intergenic | 35.0% | |
| ATACAGCTCAAACAATTGGA+AGG | + | chr3.4:36397562-36397581 | MS.gene89940:CDS | 35.0% | |
| ATACTACCTTTACAACTTCC+AGG | + | chr3.4:36394427-36394446 | MS.gene89940:CDS | 35.0% | |
| ATATGGAGAAACTATGCCAA+TGG | - | chr3.4:36395056-36395075 | None:intergenic | 35.0% | |
| ATCGTTAGAGAATCACTTTG+TGG | + | chr3.4:36393635-36393654 | MS.gene89940:CDS | 35.0% | |
| ATCTTTCAATTGCAATGCTC+TGG | - | chr3.4:36393963-36393982 | None:intergenic | 35.0% | |
| ATGAAGCCATAGTCATTGTA+AGG | - | chr3.4:36391742-36391761 | None:intergenic | 35.0% | |
| ATGATAAGGTTGAAGAGACT+AGG | + | chr3.4:36393881-36393900 | MS.gene89940:CDS | 35.0% | |
| ATGTTCAAACATGCTACAGT+AGG | + | chr3.4:36394760-36394779 | MS.gene89940:intron | 35.0% | |
| ATGTTTGGCAATTTCCAATG+CGG | - | chr3.4:36394224-36394243 | None:intergenic | 35.0% | |
| CACGTGACACCAAAAATATA+AGG | - | chr3.4:36391918-36391937 | None:intergenic | 35.0% | |
| CATCCTGTTCAAAAAGAAAG+AGG | - | chr3.4:36396338-36396357 | None:intergenic | 35.0% | |
| CATGTGAGAAATTGCGAAAA+AGG | - | chr3.4:36394937-36394956 | None:intergenic | 35.0% | |
| CCAAATCATGGATTCAATTG+AGG | - | chr3.4:36396270-36396289 | None:intergenic | 35.0% | |
| CCTCAATTGAATCCATGATT+TGG | + | chr3.4:36396267-36396286 | MS.gene89940:intron | 35.0% | |
| CTAGTACAAATGTACTCCTA+GGG | - | chr3.4:36396618-36396637 | None:intergenic | 35.0% | |
| CTCCGAATCTGATGATTTAT+GGG | + | chr3.4:36393364-36393383 | MS.gene89940:CDS | 35.0% | |
| CTCGAGTTTCTTCCAATAAA+TGG | - | chr3.4:36392375-36392394 | None:intergenic | 35.0% | |
| CTGAAGAGAAGTTCTGTAAT+TGG | - | chr3.4:36395218-36395237 | None:intergenic | 35.0% | |
| CTGCCAAAAATTGTCAGAAT+CGG | - | chr3.4:36397879-36397898 | None:intergenic | 35.0% | |
| CTGTAATCTAATAATGCCAG+AGG | + | chr3.4:36394132-36394151 | MS.gene89940:CDS | 35.0% | |
| CTGTAGCATGTTTGAACATT+CGG | - | chr3.4:36394759-36394778 | None:intergenic | 35.0% | |
| CTTCAGAAATACAATGTGGA+AGG | + | chr3.4:36395585-36395604 | MS.gene89940:intron | 35.0% | |
| GAAAAAATGAAGATGCGGAA+GGG | + | chr3.4:36397360-36397379 | MS.gene89940:CDS | 35.0% | |
| GAAAACAGGTTTATTCATCG+AGG | + | chr3.4:36392547-36392566 | MS.gene89940:CDS | 35.0% | |
| GAACAAATGTAGCTCTTACA+AGG | + | chr3.4:36395257-36395276 | MS.gene89940:intron | 35.0% | |
| GGTGCCAGAATTCAAAATTA+TGG | - | chr3.4:36392155-36392174 | None:intergenic | 35.0% | |
| GTAAAATAGTTACCTTCCCT+AGG | + | chr3.4:36396599-36396618 | MS.gene89940:CDS | 35.0% | |
| GTGTTCAATAGAGATAGTGA+AGG | + | chr3.4:36395977-36395996 | MS.gene89940:CDS | 35.0% | |
| GTTAGTTGGAAGATCAGAAA+AGG | - | chr3.4:36396992-36397011 | None:intergenic | 35.0% | |
| GTTATGCACTCATTTACCAA+TGG | + | chr3.4:36393994-36394013 | MS.gene89940:CDS | 35.0% | |
| TACAGCTCAAACAATTGGAA+GGG | + | chr3.4:36397563-36397582 | MS.gene89940:CDS | 35.0% | |
| TAGGGAAGATCAAGTAATCT+TGG | + | chr3.4:36397932-36397951 | MS.gene89940:CDS | 35.0% | |
| TAGTTAAGTCTCAGATGAGT+TGG | - | chr3.4:36393035-36393054 | None:intergenic | 35.0% | |
| TCCAACAAACATTGCAATCA+AGG | + | chr3.4:36393589-36393608 | MS.gene89940:CDS | 35.0% | |
| TCCTTGATTGCAATGTTTGT+TGG | - | chr3.4:36393593-36393612 | None:intergenic | 35.0% | |
| TCGATCACCAAAAAGTTCAT+TGG | - | chr3.4:36394376-36394395 | None:intergenic | 35.0% | |
| TGAAAAAATGAAGATGCGGA+AGG | + | chr3.4:36397359-36397378 | MS.gene89940:CDS | 35.0% | |
| TGAAGTTCAGGATCTAACAA+TGG | + | chr3.4:36397476-36397495 | MS.gene89940:CDS | 35.0% | |
| TGACAATGTTTGGAAGAGTT+TGG | + | chr3.4:36395435-36395454 | MS.gene89940:intron | 35.0% | |
| TGAGTGTCAACTTTCTTCTA+TGG | + | chr3.4:36394477-36394496 | MS.gene89940:CDS | 35.0% | |
| TGTGTTCATTGATGAAGTTC+AGG | + | chr3.4:36397464-36397483 | MS.gene89940:CDS | 35.0% | |
| TTAAGTTACCATCAGTGATG+TGG | - | chr3.4:36392840-36392859 | None:intergenic | 35.0% | |
| TTACAATGACTATGGCTTCA+TGG | + | chr3.4:36391741-36391760 | MS.gene89940:CDS | 35.0% | |
| TTCAATTGACATGTTGAAGG+TGG | + | chr3.4:36397794-36397813 | MS.gene89940:CDS | 35.0% | |
| TTCTCTAGTTGAGACAATGA+AGG | + | chr3.4:36398431-36398450 | MS.gene89940:CDS | 35.0% | |
| TTGAGGACCGAAAAATACAA+GGG | + | chr3.4:36397426-36397445 | MS.gene89940:CDS | 35.0% | |
| TTGATTCCTGGAAGTTGTAA+AGG | - | chr3.4:36394436-36394455 | None:intergenic | 35.0% | |
| TTGGGAGAAGCTTATTTGAA+AGG | + | chr3.4:36394622-36394641 | MS.gene89940:intron | 35.0% | |
| TTGTAATTGATCTCCATCGT+AGG | + | chr3.4:36397403-36397422 | MS.gene89940:CDS | 35.0% | |
| TTTAGTACTTGTCCAGCATA+TGG | - | chr3.4:36395073-36395092 | None:intergenic | 35.0% | |
| TTTGGCAGAAATGGTTACAA+CGG | + | chr3.4:36397891-36397910 | MS.gene89940:CDS | 35.0% | |
| ! | AACATTACCTGGAGATGTTT+TGG | + | chr3.4:36392582-36392601 | MS.gene89940:CDS | 35.0% |
| ! | ACTCCTCTTTCTTTTTGAAC+AGG | + | chr3.4:36396332-36396351 | MS.gene89940:intron | 35.0% |
| ! | ATGATTTGCAGAGATTTGGA+AGG | + | chr3.4:36392635-36392654 | MS.gene89940:CDS | 35.0% |
| ! | ATTCACTTGACAGAGTTGAT+TGG | + | chr3.4:36394242-36394261 | MS.gene89940:CDS | 35.0% |
| ! | CTAAGCCCATGTTTTCTTAT+TGG | + | chr3.4:36398370-36398389 | MS.gene89940:CDS | 35.0% |
| ! | CTCATTTTGAATCAGCTTAG+TGG | - | chr3.4:36396674-36396693 | None:intergenic | 35.0% |
| ! | CTCTTTCTTTTTGAACAGGA+TGG | + | chr3.4:36396336-36396355 | MS.gene89940:intron | 35.0% |
| ! | GATTTTCTGATCTCGAGAAT+CGG | + | chr3.4:36397088-36397107 | MS.gene89940:CDS | 35.0% |
| ! | GCACCAATATAACTGTTTTC+AGG | + | chr3.4:36392170-36392189 | MS.gene89940:intron | 35.0% |
| ! | GGCATTGTTTATGGATTTTG+GGG | + | chr3.4:36395389-36395408 | MS.gene89940:intron | 35.0% |
| ! | GTGAATGATTTGCAGAGATT+TGG | + | chr3.4:36392631-36392650 | MS.gene89940:CDS | 35.0% |
| ! | TACTTTTCTTGGTTGTAGCA+TGG | + | chr3.4:36395008-36395027 | MS.gene89940:intron | 35.0% |
| ! | TCATTGCTAGGCATTGTTTA+TGG | + | chr3.4:36395380-36395399 | MS.gene89940:intron | 35.0% |
| ! | TGCATGTTGAGAAGGTTTTT+CGG | - | chr3.4:36394666-36394685 | None:intergenic | 35.0% |
| ! | TGTTTCTGATTATCACGTCA+TGG | + | chr3.4:36393850-36393869 | MS.gene89940:CDS | 35.0% |
| ! | TTCAAGAGACGTTGTTTCAA+GGG | + | chr3.4:36394077-36394096 | MS.gene89940:CDS | 35.0% |
| ! | TTGCTTCTTCTCCTTTGAAA+AGG | + | chr3.4:36398160-36398179 | MS.gene89940:CDS | 35.0% |
| ! | TTTCAAGAGACGTTGTTTCA+AGG | + | chr3.4:36394076-36394095 | MS.gene89940:CDS | 35.0% |
| !! | AAATATCTTCTAGAGGCACT+AGG | - | chr3.4:36396040-36396059 | None:intergenic | 35.0% |
| !! | AAGAGGGTTTTGTGTTTTGT+GGG | + | chr3.4:36397538-36397557 | MS.gene89940:CDS | 35.0% |
| !! | ACAAAGGAGAAAGTATCCAT+TGG | + | chr3.4:36395037-36395056 | MS.gene89940:intron | 35.0% |
| !! | ACAACCTTTGGAATGATCTA+CGG | - | chr3.4:36395809-36395828 | None:intergenic | 35.0% |
| !! | GTTTGTAATGAAGCTGGTTT+TGG | + | chr3.4:36394603-36394622 | MS.gene89940:intron | 35.0% |
| !! | GTTTTTCGACTTATACTGGA+TGG | + | chr3.4:36393786-36393805 | MS.gene89940:CDS | 35.0% |
| !! | TGCAAATCATTCACTGATTC+AGG | - | chr3.4:36392625-36392644 | None:intergenic | 35.0% |
| !! | TTGAATCCATGATTTGGTTG+TGG | + | chr3.4:36396273-36396292 | MS.gene89940:intron | 35.0% |
| !! | TTGTGACAATTTTAGCACCT+CGG | - | chr3.4:36397739-36397758 | None:intergenic | 35.0% |
| !! | TTTTGGAAAGGCTTGCAAAT+GGG | + | chr3.4:36395865-36395884 | MS.gene89940:CDS | 35.0% |
| !!! | CGGTAATAAACGTTTTGGAA+AGG | + | chr3.4:36395853-36395872 | MS.gene89940:CDS | 35.0% |
| !!! | CTGACAATTTTTGGCAGAAA+TGG | + | chr3.4:36397882-36397901 | MS.gene89940:CDS | 35.0% |
| ACAATGAAGGTTGAAGGATG+AGG | + | chr3.4:36398444-36398463 | MS.gene89940:CDS | 40.0% | |
| ACACACACACACACATTTCT+AGG | - | chr3.4:36392100-36392119 | None:intergenic | 40.0% | |
| ACAGCAGCAAAGCAAAAACT+CGG | + | chr3.4:36395833-36395852 | MS.gene89940:CDS | 40.0% | |
| ACAGCTCAAACAATTGGAAG+GGG | + | chr3.4:36397564-36397583 | MS.gene89940:CDS | 40.0% | |
| ACAGTAGGCAATATCTTCCA+GGG | + | chr3.4:36394775-36394794 | MS.gene89940:intron | 40.0% | |
| ACGTCTCTTGAAATGAGTCA+AGG | - | chr3.4:36394069-36394088 | None:intergenic | 40.0% | |
| ACGTGTGTAATCTGATGAGA+TGG | - | chr3.4:36396524-36396543 | None:intergenic | 40.0% | |
| AGAAACTTTGTGCAGCCTAA+AGG | - | chr3.4:36394347-36394366 | None:intergenic | 40.0% | |
| AGATCCAAGATAGTGAGTGA+TGG | - | chr3.4:36392344-36392363 | None:intergenic | 40.0% | |
| ATATTGAAGGCTGGGAAAAC+AGG | + | chr3.4:36392533-36392552 | MS.gene89940:CDS | 40.0% | |
| ATCAATCACGCCATTCTTGT+TGG | + | chr3.4:36394451-36394470 | MS.gene89940:CDS | 40.0% | |
| ATCAATCTCTTCTCTTCCAC+CGG | - | chr3.4:36394835-36394854 | None:intergenic | 40.0% | |
| ATGAGGCGAAAGATTTCGTT+CGG | - | chr3.4:36396903-36396922 | None:intergenic | 40.0% | |
| CAATAGAGATAGTGAAGGAC+TGG | + | chr3.4:36395982-36396001 | MS.gene89940:CDS | 40.0% | |
| CAGAAATACAATGTGGAAGG+TGG | + | chr3.4:36395588-36395607 | MS.gene89940:intron | 40.0% | |
| CCATAAATCATCAGATTCGG+AGG | - | chr3.4:36393366-36393385 | None:intergenic | 40.0% | |
| CCTAGTACAAATGTACTCCT+AGG | - | chr3.4:36396619-36396638 | None:intergenic | 40.0% | |
| CCTCCGAATCTGATGATTTA+TGG | + | chr3.4:36393363-36393382 | MS.gene89940:CDS | 40.0% | |
| CGTCTCTTGAAATGAGTCAA+GGG | - | chr3.4:36394068-36394087 | None:intergenic | 40.0% | |
| CTTTAACTAGAGCAAGGAAG+AGG | + | chr3.4:36398313-36398332 | MS.gene89940:CDS | 40.0% | |
| GAATCACTTTGTGGCCAAAT+TGG | + | chr3.4:36393644-36393663 | MS.gene89940:CDS | 40.0% | |
| GAGCCGTATAAAACATTACC+TGG | + | chr3.4:36392571-36392590 | MS.gene89940:CDS | 40.0% | |
| GCACAACTTCTACTTCCTTT+AGG | + | chr3.4:36394329-36394348 | MS.gene89940:CDS | 40.0% | |
| GCTATTCGTGATTGTCTTTC+TGG | + | chr3.4:36393440-36393459 | MS.gene89940:CDS | 40.0% | |
| GGAAGAGAAGAGATTGATGA+CGG | + | chr3.4:36394837-36394856 | MS.gene89940:intron | 40.0% | |
| GGAGTACATTTGTACTAGGT+CGG | + | chr3.4:36396620-36396639 | MS.gene89940:CDS | 40.0% | |
| GGTACTACTAATACAACGGA+GGG | + | chr3.4:36396415-36396434 | MS.gene89940:CDS | 40.0% | |
| GGTGATTTAGTTGAGTCTGA+AGG | + | chr3.4:36396436-36396455 | MS.gene89940:CDS | 40.0% | |
| GTGAATTACAGTAGCGATGA+TGG | + | chr3.4:36395115-36395134 | MS.gene89940:intron | 40.0% | |
| GTTGAGACAATGAAGGTTGA+AGG | + | chr3.4:36398438-36398457 | MS.gene89940:CDS | 40.0% | |
| GTTGAGGACCGAAAAATACA+AGG | + | chr3.4:36397425-36397444 | MS.gene89940:CDS | 40.0% | |
| TAATGCCAGAGGATTCTTCT+TGG | + | chr3.4:36394143-36394162 | MS.gene89940:CDS | 40.0% | |
| TACAAATGTACTCCTAGGGA+AGG | - | chr3.4:36396614-36396633 | None:intergenic | 40.0% | |
| TACAGTAGGCAATATCTTCC+AGG | + | chr3.4:36394774-36394793 | MS.gene89940:intron | 40.0% | |
| TCATCAGATTACACACGTAC+TGG | + | chr3.4:36396526-36396545 | MS.gene89940:CDS | 40.0% | |
| TCATGGAGAACGAGATGATA+AGG | + | chr3.4:36393867-36393886 | MS.gene89940:CDS | 40.0% | |
| TCTTTCATAAATGTTGCCGG+TGG | + | chr3.4:36394816-36394835 | MS.gene89940:intron | 40.0% | |
| TGCTGATAAAGACACCGAAA+TGG | + | chr3.4:36395492-36395511 | MS.gene89940:intron | 40.0% | |
| TGGTACTACTAATACAACGG+AGG | + | chr3.4:36396414-36396433 | MS.gene89940:CDS | 40.0% | |
| TGGTAGAATTTCCATTGAGC+TGG | + | chr3.4:36396356-36396375 | MS.gene89940:CDS | 40.0% | |
| TTATTTCCTTGCAGGTCCAT+AGG | + | chr3.4:36396931-36396950 | MS.gene89940:intron | 40.0% | |
| TTGAAGAGACTAGGAACGAA+AGG | + | chr3.4:36393890-36393909 | MS.gene89940:CDS | 40.0% | |
| ! | ATTTTGTGCAACGACGATGA+TGG | + | chr3.4:36392874-36392893 | MS.gene89940:CDS | 40.0% |
| ! | CCTAGGAGTACATTTGTACT+AGG | + | chr3.4:36396616-36396635 | MS.gene89940:CDS | 40.0% |
| ! | GCATGTTGAGAAGGTTTTTC+GGG | - | chr3.4:36394665-36394684 | None:intergenic | 40.0% |
| ! | TCAATTGATGGTTTCCAAGG+TGG | + | chr3.4:36395157-36395176 | MS.gene89940:intron | 40.0% |
| ! | TGCAGAGATTTGGAAGGTTT+TGG | + | chr3.4:36392641-36392660 | MS.gene89940:CDS | 40.0% |
| ! | TTCTCCTTTGAAAAGGCGAT+GGG | + | chr3.4:36398167-36398186 | MS.gene89940:CDS | 40.0% |
| ! | TTTTCAGCAGAAGTCGTTTC+TGG | + | chr3.4:36393913-36393932 | MS.gene89940:CDS | 40.0% |
| ! | TTTTGGATATTTGCGCTTCC+TGG | - | chr3.4:36396382-36396401 | None:intergenic | 40.0% |
| ! | TTTTGTGCAACGACGATGAT+GGG | + | chr3.4:36392875-36392894 | MS.gene89940:CDS | 40.0% |
| !! | AATCCATGATTTGGTTGTGG+AGG | + | chr3.4:36396276-36396295 | MS.gene89940:intron | 40.0% |
| !! | AGAGGGTTTTGTGTTTTGTG+GGG | + | chr3.4:36397539-36397558 | MS.gene89940:CDS | 40.0% |
| !! | ATAGTGAGTGATGGACTCAA+AGG | - | chr3.4:36392335-36392354 | None:intergenic | 40.0% |
| !! | ATGTGGCTTTAACTAGAGCA+AGG | + | chr3.4:36398307-36398326 | MS.gene89940:CDS | 40.0% |
| !! | CTCATTCAGGTTGAGAAGAT+TGG | + | chr3.4:36392304-36392323 | MS.gene89940:intron | 40.0% |
| !! | GAAGAGGGTTTTGTGTTTTG+TGG | + | chr3.4:36397537-36397556 | MS.gene89940:CDS | 40.0% |
| !! | GAATAGAGTCATAGTTCTGG+AGG | - | chr3.4:36396302-36396321 | None:intergenic | 40.0% |
| !! | GTGGAGACTAGTTTGGTTTA+TGG | + | chr3.4:36397813-36397832 | MS.gene89940:CDS | 40.0% |
| !! | TTCTGGAGTTTCTGAGAGAA+AGG | + | chr3.4:36393930-36393949 | MS.gene89940:CDS | 40.0% |
| !!! | ACACATTTCTAGGACCGTTT+TGG | - | chr3.4:36392090-36392109 | None:intergenic | 40.0% |
| !!! | ACCTGGAGATGTTTTGGTTT+TGG | + | chr3.4:36392588-36392607 | MS.gene89940:CDS | 40.0% |
| !!! | GTTTTGGAAAGGCTTGCAAA+TGG | + | chr3.4:36395864-36395883 | MS.gene89940:CDS | 40.0% |
| !!! | GTTTTTGTTTTTCCAGTCCC+AGG | - | chr3.4:36393512-36393531 | None:intergenic | 40.0% |
| AAACGCTTTCAACAGCCACA+TGG | - | chr3.4:36396705-36396724 | None:intergenic | 45.0% | |
| AATCCCTGAGCTGTTGAACA+CGG | - | chr3.4:36393766-36393785 | None:intergenic | 45.0% | |
| ACACTCATCGCCAACAAGAA+TGG | - | chr3.4:36394464-36394483 | None:intergenic | 45.0% | |
| ACATTTGTACTAGGTCGGTC+AGG | + | chr3.4:36396625-36396644 | MS.gene89940:CDS | 45.0% | |
| ACCAACAATTGCCGTAACAC+CGG | - | chr3.4:36396784-36396803 | None:intergenic | 45.0% | |
| AGCAACTCTATGCTCAAGCA+TGG | + | chr3.4:36392393-36392412 | MS.gene89940:CDS | 45.0% | |
| AGCATAAAAGCAGCTGAGAG+TGG | + | chr3.4:36397234-36397253 | MS.gene89940:CDS | 45.0% | |
| ATGTAGCTCTTACAAGGGCT+AGG | + | chr3.4:36395263-36395282 | MS.gene89940:intron | 45.0% | |
| CAAGGTTGCAGGACTTAAAC+TGG | + | chr3.4:36392441-36392460 | MS.gene89940:CDS | 45.0% | |
| CCAAACAACAGCATATCACC+TGG | - | chr3.4:36393686-36393705 | None:intergenic | 45.0% | |
| CCAGGTGATATGCTGTTGTT+TGG | + | chr3.4:36393683-36393702 | MS.gene89940:CDS | 45.0% | |
| CTCATACACCAAGCACCTTA+TGG | + | chr3.4:36392418-36392437 | MS.gene89940:CDS | 45.0% | |
| GAACTTTAGTACTCATGCCG+AGG | + | chr3.4:36397719-36397738 | MS.gene89940:CDS | 45.0% | |
| GAAGAGGTTGTGGATTTGTG+AGG | + | chr3.4:36398329-36398348 | MS.gene89940:CDS | 45.0% | |
| GAGTCCATCACTCACTATCT+TGG | + | chr3.4:36392337-36392356 | MS.gene89940:CDS | 45.0% | |
| GCAGAAATGGTTACAACGGT+GGG | + | chr3.4:36397895-36397914 | MS.gene89940:CDS | 45.0% | |
| GCCAAAACCAAAACATCTCC+AGG | - | chr3.4:36392592-36392611 | None:intergenic | 45.0% | |
| GGATTCAATTGAGGCTGCAT+CGG | - | chr3.4:36396261-36396280 | None:intergenic | 45.0% | |
| GGCATAGTTTCTCCATATGC+TGG | + | chr3.4:36395058-36395077 | MS.gene89940:intron | 45.0% | |
| GGGGATACAGCTCAAACAAT+TGG | + | chr3.4:36397558-36397577 | MS.gene89940:CDS | 45.0% | |
| GGTAAGGGATGATTCTACCA+AGG | + | chr3.4:36397953-36397972 | MS.gene89940:CDS | 45.0% | |
| GTGCAAGGGCCTTCAATTTA+AGG | + | chr3.4:36398028-36398047 | MS.gene89940:CDS | 45.0% | |
| GTGCATGATTCCAAGAATCG+TGG | + | chr3.4:36395457-36395476 | MS.gene89940:intron | 45.0% | |
| TATCTTCCAGGGCCAATGTA+TGG | + | chr3.4:36394786-36394805 | MS.gene89940:intron | 45.0% | |
| TCTCGAGAATCGGAAGAAGA+AGG | + | chr3.4:36397098-36397117 | MS.gene89940:CDS | 45.0% | |
| TGATATCTCGTTCACCACCT+TGG | - | chr3.4:36395174-36395193 | None:intergenic | 45.0% | |
| TGCTGTTGAGATCAAGAGAC+CGG | + | chr3.4:36396762-36396781 | MS.gene89940:CDS | 45.0% | |
| TGGACAGGAGATGAGAATGA+TGG | + | chr3.4:36392682-36392701 | MS.gene89940:CDS | 45.0% | |
| TGGCCGTGATGATATTGAAG+TGG | + | chr3.4:36396546-36396565 | MS.gene89940:CDS | 45.0% | |
| TGGGAACATTGGAGGGTTTA+GGG | + | chr3.4:36397914-36397933 | MS.gene89940:CDS | 45.0% | |
| TTCTGTGCTGCATGTTGAGA+AGG | - | chr3.4:36394674-36394693 | None:intergenic | 45.0% | |
| TTGATCTCCATCGTAGGTTG+AGG | + | chr3.4:36397409-36397428 | MS.gene89940:CDS | 45.0% | |
| TTTGTGCAACGACGATGATG+GGG | + | chr3.4:36392876-36392895 | MS.gene89940:CDS | 45.0% | |
| ! | AAGAAATCGTGCGCCTTGTT+GGG | + | chr3.4:36397976-36397995 | MS.gene89940:CDS | 45.0% |
| ! | AAGGCCCTTGCACTCTAAAA+TGG | - | chr3.4:36398021-36398040 | None:intergenic | 45.0% |
| ! | ACGTTCAGGTTCTCAAGATG+TGG | + | chr3.4:36396012-36396031 | MS.gene89940:CDS | 45.0% |
| ! | AGAATGGCGTGATTGATTCC+TGG | - | chr3.4:36394448-36394467 | None:intergenic | 45.0% |
| ! | AGAGCGCCTTACAATGACTA+TGG | + | chr3.4:36391733-36391752 | MS.gene89940:CDS | 45.0% |
| ! | AGATCAAGAGACCGGTGTTA+CGG | + | chr3.4:36396770-36396789 | MS.gene89940:CDS | 45.0% |
| ! | CAAGAGCTTGTTTCCCAACA+AGG | - | chr3.4:36397992-36398011 | None:intergenic | 45.0% |
| ! | CGTTCAGGTTCTCAAGATGT+GGG | + | chr3.4:36396013-36396032 | MS.gene89940:CDS | 45.0% |
| ! | CTTCTCCTTTGAAAAGGCGA+TGG | + | chr3.4:36398166-36398185 | MS.gene89940:CDS | 45.0% |
| ! | GCTGCTGTTTACACAACCTT+TGG | - | chr3.4:36395821-36395840 | None:intergenic | 45.0% |
| ! | GTTGAAGGTGGAGACTAGTT+TGG | + | chr3.4:36397806-36397825 | MS.gene89940:CDS | 45.0% |
| ! | TCTCCTTTGAAAAGGCGATG+GGG | + | chr3.4:36398168-36398187 | MS.gene89940:CDS | 45.0% |
| ! | TGAGAATGATGGTGAGAACG+TGG | + | chr3.4:36392693-36392712 | MS.gene89940:CDS | 45.0% |
| !! | ACGATGATGGGGTAAGAAAC+TGG | + | chr3.4:36392887-36392906 | MS.gene89940:intron | 45.0% |
| !! | AGAGAAGAGATTGATGACGG+CGG | + | chr3.4:36394840-36394859 | MS.gene89940:intron | 45.0% |
| !! | GTGGCTGTTGAAAGCGTTTA+TGG | + | chr3.4:36396706-36396725 | MS.gene89940:CDS | 45.0% |
| !! | TGTAGCATGGCTTGCTACAA+AGG | + | chr3.4:36395021-36395040 | MS.gene89940:intron | 45.0% |
| !! | TTGTTGGTGACGTTGAGTTC+TGG | + | chr3.4:36396796-36396815 | MS.gene89940:CDS | 45.0% |
| !! | TTTGTTTTTCCAGTCCCAGG+AGG | - | chr3.4:36393509-36393528 | None:intergenic | 45.0% |
| !!! | GGCGATTTGTTTTGTTCTCC+AGG | + | chr3.4:36393665-36393684 | MS.gene89940:CDS | 45.0% |
| AAGGCGCACGATTTCTTCCT+TGG | - | chr3.4:36397973-36397992 | None:intergenic | 50.0% | |
| ACAACCGTGTTCAACAGCTC+AGG | + | chr3.4:36393759-36393778 | MS.gene89940:CDS | 50.0% | |
| ACAACGGTGGGAACATTGGA+GGG | + | chr3.4:36397907-36397926 | MS.gene89940:CDS | 50.0% | |
| ACACCAAGCACCTTATGGCA+AGG | + | chr3.4:36392423-36392442 | MS.gene89940:CDS | 50.0% | |
| AGGCCTCCACAACCAAATCA+TGG | - | chr3.4:36396282-36396301 | None:intergenic | 50.0% | |
| AGTCCTGCAACCTTGCCATA+AGG | - | chr3.4:36392436-36392455 | None:intergenic | 50.0% | |
| ATTTCGACACTACGTCCCCT+AGG | - | chr3.4:36395897-36395916 | None:intergenic | 50.0% | |
| CAACCGTGTTCAACAGCTCA+GGG | + | chr3.4:36393760-36393779 | MS.gene89940:CDS | 50.0% | |
| CTAGAGCAAGGAAGAGGTTG+TGG | + | chr3.4:36398319-36398338 | MS.gene89940:CDS | 50.0% | |
| GAAGAAATCGTGCGCCTTGT+TGG | + | chr3.4:36397975-36397994 | MS.gene89940:CDS | 50.0% | |
| GAATTTCCATTGAGCTGGCC+AGG | + | chr3.4:36396361-36396380 | MS.gene89940:CDS | 50.0% | |
| GAGGTTGTGGATTTGTGAGG+AGG | + | chr3.4:36398332-36398351 | MS.gene89940:CDS | 50.0% | |
| GGCAGAAATGGTTACAACGG+TGG | + | chr3.4:36397894-36397913 | MS.gene89940:CDS | 50.0% | |
| GGTTACAACGGTGGGAACAT+TGG | + | chr3.4:36397903-36397922 | MS.gene89940:CDS | 50.0% | |
| GTGGGAACATTGGAGGGTTT+AGG | + | chr3.4:36397913-36397932 | MS.gene89940:CDS | 50.0% | |
| TACAACGGTGGGAACATTGG+AGG | + | chr3.4:36397906-36397925 | MS.gene89940:CDS | 50.0% | |
| TGCAAATGGGTGGAGACCTA+GGG | + | chr3.4:36395878-36395897 | MS.gene89940:CDS | 50.0% | |
| TGCAGGTCCATAGGTGAGAA+TGG | + | chr3.4:36396940-36396959 | MS.gene89940:intron | 50.0% | |
| TGGAAAGGCTTGCAAATGGG+TGG | + | chr3.4:36395868-36395887 | MS.gene89940:CDS | 50.0% | |
| TTCTCACCTATGGACCTGCA+AGG | - | chr3.4:36396940-36396959 | None:intergenic | 50.0% | |
| TTGCAAATGGGTGGAGACCT+AGG | + | chr3.4:36395877-36395896 | MS.gene89940:CDS | 50.0% | |
| TTTCGGTCCTCAACCTACGA+TGG | - | chr3.4:36397419-36397438 | None:intergenic | 50.0% | |
| ! | AAGCTTATTTGGGGTCCTCC+TGG | + | chr3.4:36393491-36393510 | MS.gene89940:CDS | 50.0% |
| ! | AGCTTATTTGGGGTCCTCCT+GGG | + | chr3.4:36393492-36393511 | MS.gene89940:CDS | 50.0% |
| ! | AGTGGACTCCACATCACTGA+TGG | + | chr3.4:36392829-36392848 | MS.gene89940:CDS | 50.0% |
| ! | ATCCCCCATCGCCTTTTCAA+AGG | - | chr3.4:36398174-36398193 | None:intergenic | 50.0% |
| ! | CAACCTTGCCATAAGGTGCT+TGG | - | chr3.4:36392429-36392448 | None:intergenic | 50.0% |
| ! | CTCAGATGAGTTGGGTCTCA+GGG | - | chr3.4:36393026-36393045 | None:intergenic | 50.0% |
| ! | CTCCTTTGAAAAGGCGATGG+GGG | + | chr3.4:36398169-36398188 | MS.gene89940:CDS | 50.0% |
| ! | TCAGATGAGTTGGGTCTCAG+GGG | - | chr3.4:36393025-36393044 | None:intergenic | 50.0% |
| ! | TCTCAGATGAGTTGGGTCTC+AGG | - | chr3.4:36393027-36393046 | None:intergenic | 50.0% |
| !! | ACCGGTGTTACGGCAATTGT+TGG | + | chr3.4:36396780-36396799 | MS.gene89940:CDS | 50.0% |
| GAGTGGTAAGCTGAGTCGTG+AGG | + | chr3.4:36397251-36397270 | MS.gene89940:CDS | 55.0% | |
| GCAAATGGGTGGAGACCTAG+GGG | + | chr3.4:36395879-36395898 | MS.gene89940:CDS | 55.0% | |
| GCACCTTATGGCAAGGTTGC+AGG | + | chr3.4:36392430-36392449 | MS.gene89940:CDS | 55.0% | |
| GTACTAGGTCGGTCAGGTAC+AGG | + | chr3.4:36396631-36396650 | MS.gene89940:CDS | 55.0% | |
| TAGGGACCATACATTGGCCC+TGG | - | chr3.4:36394795-36394814 | None:intergenic | 55.0% | |
| ! | ATTTGGGGTCCTCCTGGGAC+TGG | + | chr3.4:36393497-36393516 | MS.gene89940:CDS | 60.0% |
| GCGCTTCCTGGCCAGCTCAA+TGG | - | chr3.4:36396370-36396389 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 36391706 | 36398464 | 36391706 | ID=MS.gene89940 |
| chr3.4 | mRNA | 36391706 | 36398464 | 36391706 | ID=MS.gene89940.t1;Parent=MS.gene89940 |
| chr3.4 | exon | 36391706 | 36391822 | 36391706 | ID=MS.gene89940.t1.exon1;Parent=MS.gene89940.t1 |
| chr3.4 | CDS | 36391706 | 36391822 | 36391706 | ID=cds.MS.gene89940.t1;Parent=MS.gene89940.t1 |
| chr3.4 | exon | 36392313 | 36392897 | 36392313 | ID=MS.gene89940.t1.exon2;Parent=MS.gene89940.t1 |
| chr3.4 | CDS | 36392313 | 36392897 | 36392313 | ID=cds.MS.gene89940.t1;Parent=MS.gene89940.t1 |
| chr3.4 | exon | 36393341 | 36394510 | 36393341 | ID=MS.gene89940.t1.exon3;Parent=MS.gene89940.t1 |
| chr3.4 | CDS | 36393341 | 36394510 | 36393341 | ID=cds.MS.gene89940.t1;Parent=MS.gene89940.t1 |
| chr3.4 | exon | 36395786 | 36396144 | 36395786 | ID=MS.gene89940.t1.exon4;Parent=MS.gene89940.t1 |
| chr3.4 | CDS | 36395786 | 36396144 | 36395786 | ID=cds.MS.gene89940.t1;Parent=MS.gene89940.t1 |
| chr3.4 | exon | 36396354 | 36396860 | 36396354 | ID=MS.gene89940.t1.exon5;Parent=MS.gene89940.t1 |
| chr3.4 | CDS | 36396354 | 36396860 | 36396354 | ID=cds.MS.gene89940.t1;Parent=MS.gene89940.t1 |
| chr3.4 | exon | 36396945 | 36398049 | 36396945 | ID=MS.gene89940.t1.exon6;Parent=MS.gene89940.t1 |
| chr3.4 | CDS | 36396945 | 36398049 | 36396945 | ID=cds.MS.gene89940.t1;Parent=MS.gene89940.t1 |
| chr3.4 | exon | 36398138 | 36398464 | 36398138 | ID=MS.gene89940.t1.exon7;Parent=MS.gene89940.t1 |
| chr3.4 | CDS | 36398138 | 36398464 | 36398138 | ID=cds.MS.gene89940.t1;Parent=MS.gene89940.t1 |
| Gene Sequence |
| Protein sequence |
