Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89974.t1 | XP_003606273.1 | 99.4 | 542 | 3 | 0 | 1 | 542 | 1 | 542 | 7.6e-309 | 1068.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89974.t1 | Q9FNI7 | 79.2 | 539 | 98 | 3 | 6 | 542 | 6 | 532 | 1.7e-248 | 859.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89974.t1 | G7JM38 | 99.4 | 542 | 3 | 0 | 1 | 542 | 1 | 542 | 5.5e-309 | 1068.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049887 | MS.gene89974 | 0.845882 | 3.08E-59 | -1.69E-46 |
| MS.gene050838 | MS.gene89974 | 0.862649 | 4.36E-64 | -1.69E-46 |
| MS.gene051021 | MS.gene89974 | 0.807487 | 4.94E-50 | -1.69E-46 |
| MS.gene051063 | MS.gene89974 | 0.808566 | 2.91E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene89974 | 0.80349 | 3.40E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene89974 | 0.801169 | 1.02E-48 | -1.69E-46 |
| MS.gene051850 | MS.gene89974 | 0.833956 | 3.96E-56 | -1.69E-46 |
| MS.gene051885 | MS.gene89974 | 0.883524 | 4.17E-71 | -1.69E-46 |
| MS.gene052133 | MS.gene89974 | 0.819271 | 1.27E-52 | -1.69E-46 |
| MS.gene052732 | MS.gene89974 | 0.878818 | 2.06E-69 | -1.69E-46 |
| MS.gene053143 | MS.gene89974 | 0.808719 | 2.70E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene89974 | 0.885893 | 5.49E-72 | -1.69E-46 |
| MS.gene053171 | MS.gene89974 | 0.804631 | 1.97E-49 | -1.69E-46 |
| MS.gene053174 | MS.gene89974 | 0.828 | 1.15E-54 | -1.69E-46 |
| MS.gene053581 | MS.gene89974 | 0.847833 | 9.00E-60 | -1.69E-46 |
| MS.gene054550 | MS.gene89974 | 0.814461 | 1.52E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene89974 | 0.871477 | 6.63E-67 | -1.69E-46 |
| MS.gene055465 | MS.gene89974 | 0.810145 | 1.33E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene89974 | 0.811899 | 5.56E-51 | -1.69E-46 |
| MS.gene055469 | MS.gene89974 | 0.818647 | 1.76E-52 | -1.69E-46 |
| MS.gene055537 | MS.gene89974 | 0.829317 | 5.51E-55 | -1.69E-46 |
| MS.gene055580 | MS.gene89974 | -0.833966 | 3.94E-56 | -1.69E-46 |
| MS.gene055890 | MS.gene89974 | 0.802115 | 6.54E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene89974 | 0.850115 | 2.09E-60 | -1.69E-46 |
| MS.gene056043 | MS.gene89974 | -0.843604 | 1.26E-58 | -1.69E-46 |
| MS.gene056075 | MS.gene89974 | 0.841314 | 5.12E-58 | -1.69E-46 |
| MS.gene056396 | MS.gene89974 | 0.802686 | 4.99E-49 | -1.69E-46 |
| MS.gene056432 | MS.gene89974 | 0.820385 | 7.05E-53 | -1.69E-46 |
| MS.gene056584 | MS.gene89974 | 0.822646 | 2.12E-53 | -1.69E-46 |
| MS.gene057094 | MS.gene89974 | 0.808879 | 2.49E-50 | -1.69E-46 |
| MS.gene058852 | MS.gene89974 | 0.854218 | 1.42E-61 | -1.69E-46 |
| MS.gene058906 | MS.gene89974 | 0.804668 | 1.93E-49 | -1.69E-46 |
| MS.gene058945 | MS.gene89974 | 0.812519 | 4.07E-51 | -1.69E-46 |
| MS.gene059171 | MS.gene89974 | 0.86945 | 3.07E-66 | -1.69E-46 |
| MS.gene06001 | MS.gene89974 | 0.82606 | 3.34E-54 | -1.69E-46 |
| MS.gene060194 | MS.gene89974 | 0.814602 | 1.42E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene89974 | 0.811852 | 5.69E-51 | -1.69E-46 |
| MS.gene060603 | MS.gene89974 | 0.80043 | 1.45E-48 | -1.69E-46 |
| MS.gene060884 | MS.gene89974 | 0.833115 | 6.42E-56 | -1.69E-46 |
| MS.gene060886 | MS.gene89974 | 0.827138 | 1.85E-54 | -1.69E-46 |
| MS.gene060888 | MS.gene89974 | 0.831664 | 1.47E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89974.t1 | MTR_4g055520 | 99.446 | 542 | 3 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1121 |
| MS.gene89974.t1 | MTR_4g055520 | 99.594 | 493 | 2 | 0 | 1 | 493 | 1 | 493 | 0.0 | 1021 |
| MS.gene89974.t1 | MTR_4g055520 | 99.309 | 434 | 3 | 0 | 109 | 542 | 29 | 462 | 0.0 | 901 |
| MS.gene89974.t1 | MTR_4g055520 | 88.571 | 35 | 4 | 0 | 1 | 35 | 1 | 35 | 1.27e-11 | 67.4 |
| MS.gene89974.t1 | MTR_7g103590 | 67.228 | 534 | 161 | 3 | 10 | 542 | 9 | 529 | 0.0 | 785 |
| MS.gene89974.t1 | MTR_1g061510 | 67.115 | 520 | 158 | 1 | 23 | 542 | 14 | 520 | 0.0 | 764 |
| MS.gene89974.t1 | MTR_1g492700 | 67.864 | 529 | 156 | 3 | 15 | 542 | 12 | 527 | 0.0 | 747 |
| MS.gene89974.t1 | MTR_1g061270 | 63.158 | 532 | 181 | 3 | 12 | 542 | 2 | 519 | 0.0 | 733 |
| MS.gene89974.t1 | MTR_1g061340 | 62.970 | 532 | 183 | 3 | 12 | 542 | 2 | 520 | 0.0 | 731 |
| MS.gene89974.t1 | MTR_1g061280 | 62.030 | 532 | 188 | 2 | 12 | 542 | 2 | 520 | 0.0 | 730 |
| MS.gene89974.t1 | MTR_7g101950 | 55.351 | 542 | 224 | 3 | 1 | 542 | 4 | 527 | 0.0 | 647 |
| MS.gene89974.t1 | MTR_4g006010 | 46.453 | 437 | 222 | 5 | 64 | 494 | 202 | 632 | 5.82e-138 | 416 |
| MS.gene89974.t1 | MTR_6g007807 | 43.764 | 457 | 241 | 5 | 26 | 475 | 138 | 585 | 8.01e-138 | 414 |
| MS.gene89974.t1 | MTR_3g109040 | 40.782 | 537 | 285 | 7 | 28 | 539 | 144 | 672 | 3.37e-134 | 405 |
| MS.gene89974.t1 | MTR_3g109040 | 40.782 | 537 | 285 | 7 | 28 | 539 | 155 | 683 | 4.24e-134 | 405 |
| MS.gene89974.t1 | MTR_3g103500 | 45.853 | 434 | 222 | 4 | 33 | 463 | 180 | 603 | 4.52e-134 | 405 |
| MS.gene89974.t1 | MTR_8g012320 | 38.983 | 531 | 304 | 3 | 28 | 542 | 175 | 701 | 3.77e-127 | 388 |
| MS.gene89974.t1 | MTR_3g103500 | 48.889 | 315 | 155 | 2 | 33 | 347 | 180 | 488 | 4.39e-100 | 311 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89974.t1 | AT5G22740 | 79.074 | 540 | 99 | 3 | 5 | 542 | 5 | 532 | 0.0 | 887 |
| MS.gene89974.t1 | AT5G03760 | 68.914 | 534 | 152 | 4 | 10 | 542 | 10 | 530 | 0.0 | 784 |
| MS.gene89974.t1 | AT1G23480 | 60.795 | 528 | 193 | 3 | 16 | 542 | 39 | 553 | 0.0 | 697 |
| MS.gene89974.t1 | AT1G23480 | 60.795 | 528 | 193 | 3 | 16 | 542 | 39 | 553 | 0.0 | 697 |
| MS.gene89974.t1 | AT1G23480 | 63.158 | 494 | 168 | 3 | 50 | 542 | 1 | 481 | 0.0 | 684 |
| MS.gene89974.t1 | AT4G13410 | 57.547 | 530 | 206 | 3 | 12 | 540 | 26 | 537 | 0.0 | 677 |
| MS.gene89974.t1 | AT5G16190 | 59.690 | 516 | 192 | 2 | 26 | 540 | 4 | 504 | 0.0 | 658 |
| MS.gene89974.t1 | AT2G35650 | 57.143 | 511 | 203 | 2 | 19 | 529 | 42 | 536 | 0.0 | 649 |
| MS.gene89974.t1 | AT1G24070 | 57.564 | 509 | 202 | 2 | 32 | 540 | 58 | 552 | 0.0 | 642 |
| MS.gene89974.t1 | AT5G16190 | 56.102 | 549 | 192 | 3 | 26 | 540 | 4 | 537 | 0.0 | 641 |
| MS.gene89974.t1 | AT2G35650 | 58.958 | 480 | 181 | 2 | 50 | 529 | 1 | 464 | 0.0 | 631 |
| MS.gene89974.t1 | AT2G35650 | 58.958 | 480 | 181 | 2 | 50 | 529 | 1 | 464 | 0.0 | 631 |
| MS.gene89974.t1 | AT5G16190 | 64.612 | 438 | 155 | 0 | 26 | 463 | 4 | 441 | 0.0 | 618 |
| MS.gene89974.t1 | AT5G16190 | 61.572 | 458 | 160 | 2 | 84 | 540 | 1 | 443 | 0.0 | 610 |
| MS.gene89974.t1 | AT3G56000 | 54.902 | 510 | 210 | 5 | 35 | 539 | 29 | 523 | 0.0 | 593 |
| MS.gene89974.t1 | AT4G16590 | 51.737 | 518 | 202 | 3 | 23 | 540 | 51 | 520 | 0.0 | 574 |
| MS.gene89974.t1 | AT1G23480 | 63.840 | 401 | 132 | 2 | 142 | 542 | 21 | 408 | 0.0 | 559 |
| MS.gene89974.t1 | AT4G13410 | 60.406 | 394 | 138 | 2 | 147 | 540 | 1 | 376 | 0.0 | 531 |
| MS.gene89974.t1 | AT2G35650 | 59.432 | 387 | 141 | 2 | 143 | 529 | 8 | 378 | 4.41e-179 | 510 |
| MS.gene89974.t1 | AT4G13410 | 59.673 | 367 | 140 | 2 | 12 | 377 | 26 | 385 | 4.99e-169 | 484 |
| MS.gene89974.t1 | AT1G24070 | 60.393 | 356 | 129 | 3 | 32 | 387 | 58 | 401 | 4.96e-160 | 462 |
| MS.gene89974.t1 | AT4G31590 | 44.589 | 462 | 246 | 5 | 6 | 463 | 138 | 593 | 7.42e-142 | 426 |
| MS.gene89974.t1 | AT3G28180 | 46.485 | 441 | 224 | 4 | 26 | 463 | 134 | 565 | 4.42e-141 | 423 |
| MS.gene89974.t1 | AT3G07330 | 40.755 | 530 | 298 | 2 | 28 | 542 | 153 | 681 | 1.41e-140 | 422 |
| MS.gene89974.t1 | AT3G07330 | 40.755 | 530 | 298 | 2 | 28 | 542 | 153 | 681 | 1.41e-140 | 422 |
| MS.gene89974.t1 | AT2G24630 | 39.459 | 555 | 309 | 8 | 6 | 539 | 138 | 686 | 4.43e-136 | 410 |
| MS.gene89974.t1 | AT2G24630 | 39.459 | 555 | 309 | 8 | 6 | 539 | 138 | 686 | 4.43e-136 | 410 |
| MS.gene89974.t1 | AT4G07960 | 40.684 | 526 | 286 | 7 | 33 | 542 | 183 | 698 | 1.26e-126 | 386 |
| MS.gene89974.t1 | AT4G07960 | 40.684 | 526 | 286 | 7 | 33 | 542 | 183 | 698 | 1.26e-126 | 386 |
Find 117 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGACCTTTCCATAAATT+TGG | 0.095743 | 4.2:-47969910 | None:intergenic |
| CACCTCTTGTTTCTCTAATT+TGG | 0.108542 | 4.2:-47966347 | None:intergenic |
| GAAAACAAGATCCAAATTTA+TGG | 0.196456 | 4.2:+47969899 | MS.gene89974:CDS |
| CTGAGGTTCATGTTCCAATT+TGG | 0.199327 | 4.2:+47969498 | MS.gene89974:CDS |
| CATGAGCAGGCTTAATTTCT+TGG | 0.200959 | 4.2:+47970384 | MS.gene89974:intron |
| TTTCATGGAAAGAGTTTATA+TGG | 0.210110 | 4.2:+47965377 | MS.gene89974:CDS |
| CTAATTGGTTTGCTAGAATA+TGG | 0.211369 | 4.2:+47969762 | MS.gene89974:CDS |
| CATATTCTAGCAAACCAATT+AGG | 0.216535 | 4.2:-47969761 | None:intergenic |
| CGTACCAAAGCGACCCTAAT+TGG | 0.229974 | 4.2:+47969747 | MS.gene89974:CDS |
| TGAGGTTCATGTTCCAATTT+GGG | 0.231288 | 4.2:+47969499 | MS.gene89974:CDS |
| TTCCTTTACTTGCCCATCTT+TGG | 0.241277 | 4.2:-47966311 | None:intergenic |
| TCAGCTACTCATGCTTTCTT+TGG | 0.243047 | 4.2:+47968536 | MS.gene89974:CDS |
| GAGCGGCTTGTGGGCTTTCA+TGG | 0.247561 | 4.2:+47965688 | MS.gene89974:CDS |
| ACCTTCTCAATTGTAGGATT+TGG | 0.248263 | 4.2:+47970502 | MS.gene89974:CDS |
| TCGCTGTTCGAGCAAGTCTT+AGG | 0.257915 | 4.2:+47968873 | MS.gene89974:CDS |
| ATGCAGGGACGGCCGGTATT+TGG | 0.263743 | 4.2:+47968786 | MS.gene89974:intron |
| CCTTGAACAAGAGCAATTTC+AGG | 0.303932 | 4.2:-47966507 | None:intergenic |
| GACTCTGGTATATAAACTTT+AGG | 0.307674 | 4.2:-47965231 | None:intergenic |
| CATGCTTTCTTTGGCTTCAA+TGG | 0.310696 | 4.2:+47968545 | MS.gene89974:CDS |
| CAAGTCAAATTAAGATGATA+TGG | 0.326108 | 4.2:+47965277 | MS.gene89974:CDS |
| CCTGAAATTGCTCTTGTTCA+AGG | 0.326116 | 4.2:+47966507 | MS.gene89974:CDS |
| TGCTAATCTGTTCCGCAAAA+TGG | 0.327429 | 4.2:+47969236 | MS.gene89974:CDS |
| GTTCAAGGTCGTTGGAGATT+TGG | 0.339973 | 4.2:+47966522 | MS.gene89974:CDS |
| ACCTTAACCTTCTCAATTGT+AGG | 0.346965 | 4.2:+47970496 | MS.gene89974:CDS |
| AAATGGCGATGGAGATTATA+AGG | 0.367253 | 4.2:+47969253 | MS.gene89974:CDS |
| AAGAATGCAAGAGATGTCTT+TGG | 0.370356 | 4.2:+47968481 | MS.gene89974:CDS |
| ATGTAAACAGCTCCCCAAAT+TGG | 0.378565 | 4.2:-47969512 | None:intergenic |
| ATTGTAGGATTTGGTTATGT+TGG | 0.379370 | 4.2:+47970511 | MS.gene89974:CDS |
| TCATACTTATAACGTTGTTC+AGG | 0.379898 | 4.2:-47965438 | None:intergenic |
| GTGTACAGAAAGTGAAGTTC+TGG | 0.382661 | 4.2:+47969369 | MS.gene89974:intron |
| TTCTACTGACCCTGTTGTTA+AGG | 0.383212 | 4.2:+47965746 | MS.gene89974:CDS |
| CGCTGTTCGAGCAAGTCTTA+GGG | 0.385066 | 4.2:+47968874 | MS.gene89974:CDS |
| CTGAAGGCTCTCAGAGTACT+TGG | 0.390561 | 4.2:-47969183 | None:intergenic |
| CAGAACAACAGTGGAAGATA+TGG | 0.392071 | 4.2:+47968847 | MS.gene89974:CDS |
| TCCTACAATTGAGAAGGTTA+AGG | 0.401066 | 4.2:-47970497 | None:intergenic |
| ATATTCTAGCAAACCAATTA+GGG | 0.403344 | 4.2:-47969760 | None:intergenic |
| TTTCGATTGGAGCGGCTTGT+GGG | 0.405849 | 4.2:+47965679 | MS.gene89974:CDS |
| TTGAGAAGGTTAAGGTTTGA+AGG | 0.410807 | 4.2:-47970489 | None:intergenic |
| GGAATTTGAACAAGAACAAC+AGG | 0.417109 | 4.2:-47965501 | None:intergenic |
| ATGGCTCTTCTAAGAAAATC+AGG | 0.417142 | 4.2:-47966465 | None:intergenic |
| CAGTAGAATCATCAAGTACT+TGG | 0.417324 | 4.2:-47965731 | None:intergenic |
| CACAAGACCATCTGTGCTGC+TGG | 0.427142 | 4.2:-47969209 | None:intergenic |
| TTCACAGTTGAGCAAGAAGT+TGG | 0.434090 | 4.2:+47968512 | MS.gene89974:CDS |
| CAGGTTTATAAGGTTTCGAT+TGG | 0.436880 | 4.2:+47965666 | MS.gene89974:intron |
| AATGCAGCAAATGGTGGAAA+TGG | 0.437156 | 4.2:+47966284 | MS.gene89974:intron |
| CTTCTTGCTCAACTGTGAAA+TGG | 0.437858 | 4.2:-47968508 | None:intergenic |
| CAAACCAATTAGGGTCGCTT+TGG | 0.439173 | 4.2:-47969751 | None:intergenic |
| GTTTCGATTGGAGCGGCTTG+TGG | 0.451144 | 4.2:+47965678 | MS.gene89974:CDS |
| AAAGGATCCAATAGAACAAA+AGG | 0.455383 | 4.2:-47969701 | None:intergenic |
| TTGCTCTTGTTCAAGGTCGT+TGG | 0.464965 | 4.2:+47966514 | MS.gene89974:CDS |
| TAATTGGTTTGCTAGAATAT+GGG | 0.467443 | 4.2:+47969763 | MS.gene89974:CDS |
| AGGTTAAGGTTTGAAGGAAG+AGG | 0.467765 | 4.2:-47970483 | None:intergenic |
| TCAGGATTACCAACAAGAAA+AGG | 0.469315 | 4.2:-47966489 | None:intergenic |
| ACCTCTCTTTCATTGAACAT+TGG | 0.472020 | 4.2:-47965522 | None:intergenic |
| TTTGTACCTTGGAGACCTCC+AGG | 0.476674 | 4.2:+47968907 | MS.gene89974:CDS |
| TTCATGGAAAGAGTTTATAT+GGG | 0.483092 | 4.2:+47965378 | MS.gene89974:CDS |
| AATATGGGAGGGCTAATGAA+TGG | 0.486275 | 4.2:+47969778 | MS.gene89974:CDS |
| CTTCAAGATGATGAAGAACT+TGG | 0.491348 | 4.2:+47965465 | MS.gene89974:CDS |
| ATATGGGAGGGCTAATGAAT+GGG | 0.499596 | 4.2:+47969779 | MS.gene89974:CDS |
| AAGACATGACATTCTCGAAA+AGG | 0.511184 | 4.2:-47969719 | None:intergenic |
| AGCAGCAATTCTCCAAATAC+CGG | 0.519466 | 4.2:-47968798 | None:intergenic |
| TGTTTACATTTCATTAGCAA+TGG | 0.522412 | 4.2:+47965344 | MS.gene89974:CDS |
| AGGCTTAATTTCTTGGAGCT+AGG | 0.522894 | 4.2:+47970391 | MS.gene89974:intron |
| TGCCAAAGATGGGCAAGTAA+AGG | 0.533260 | 4.2:+47966309 | MS.gene89974:CDS |
| CAAGATGATGAAGAACTTGG+TGG | 0.538757 | 4.2:+47965468 | MS.gene89974:CDS |
| TTGTGGGCTTTCATGGCCGA+CGG | 0.540449 | 4.2:+47965695 | MS.gene89974:CDS |
| CAAATTGGAACATGAACCTC+AGG | 0.544374 | 4.2:-47969497 | None:intergenic |
| GAGCTACGATCTTGCGAACA+AGG | 0.545461 | 4.2:-47969421 | None:intergenic |
| AACCTGAATGCAGGGACGGC+CGG | 0.545969 | 4.2:+47968779 | MS.gene89974:intron |
| AAAGCAGGTGCATTGAAAGA+AGG | 0.546072 | 4.2:+47966375 | MS.gene89974:CDS |
| TGGAAATGGAATGCCAAAGA+TGG | 0.548465 | 4.2:+47966298 | MS.gene89974:CDS |
| AAGTCAAATTAAGATGATAT+GGG | 0.549081 | 4.2:+47965278 | MS.gene89974:CDS |
| CAATTAGGGTCGCTTTGGTA+CGG | 0.549734 | 4.2:-47969746 | None:intergenic |
| TCAGATTCCAGCAGCACAGA+TGG | 0.549934 | 4.2:+47969202 | MS.gene89974:CDS |
| TTCGAGCAAGTCTTAGGGGA+TGG | 0.551876 | 4.2:+47968879 | MS.gene89974:CDS |
| ATTGCTGCTATCAATGAAGC+AGG | 0.553711 | 4.2:+47968812 | MS.gene89974:CDS |
| TGAGTTGAGAATGGTGATGA+TGG | 0.557907 | 4.2:-47969540 | None:intergenic |
| AGTTCTTCATCATCTTGAAG+AGG | 0.559787 | 4.2:-47965462 | None:intergenic |
| CAAGATCCAAATTTATGGAA+AGG | 0.560045 | 4.2:+47969904 | MS.gene89974:CDS |
| CTCAGGAACCAAAATTGTGA+GGG | 0.566831 | 4.2:-47969480 | None:intergenic |
| GATTTACCTGGAGGTCTCCA+AGG | 0.568858 | 4.2:-47968913 | None:intergenic |
| ATTACCAACAAGAAAAGGAA+TGG | 0.571120 | 4.2:-47966484 | None:intergenic |
| TAGTTCACTTGAAATGACTC+TGG | 0.578254 | 4.2:-47965246 | None:intergenic |
| TCCAATGTTCAATGAAAGAG+AGG | 0.585758 | 4.2:+47965521 | MS.gene89974:CDS |
| TCTGTTCCGCAAAATGGCGA+TGG | 0.588949 | 4.2:+47969242 | MS.gene89974:CDS |
| ACCAAATCCTACAATTGAGA+AGG | 0.592924 | 4.2:-47970503 | None:intergenic |
| TTGGTTTGCTAGAATATGGG+AGG | 0.593945 | 4.2:+47969766 | MS.gene89974:CDS |
| CTTCTAAGAAAATCAGGAGG+AGG | 0.594412 | 4.2:-47966459 | None:intergenic |
| ACAAGAGGTGGATACAAAGC+AGG | 0.594663 | 4.2:+47966360 | MS.gene89974:CDS |
| TTGAGAATGGTGATGATGGA+AGG | 0.598628 | 4.2:-47969536 | None:intergenic |
| GAGGTTCATGTTCCAATTTG+GGG | 0.599098 | 4.2:+47969500 | MS.gene89974:CDS |
| GCTGTTCGAGCAAGTCTTAG+GGG | 0.606955 | 4.2:+47968875 | MS.gene89974:CDS |
| TGAATGAATGCAGCAAATGG+TGG | 0.612388 | 4.2:+47966278 | MS.gene89974:intron |
| TGTTCCGACTGAGTTGAGAA+TGG | 0.616682 | 4.2:-47969549 | None:intergenic |
| CAGCAGCACAGATGGTCTTG+TGG | 0.617433 | 4.2:+47969210 | MS.gene89974:CDS |
| ATCACCATTCTCAACTCAGT+CGG | 0.619321 | 4.2:+47969545 | MS.gene89974:CDS |
| TGGTTTGCTAGAATATGGGA+GGG | 0.620333 | 4.2:+47969767 | MS.gene89974:CDS |
| CTATCAATGAAGCAGGAGGG+TGG | 0.623308 | 4.2:+47968819 | MS.gene89974:CDS |
| GGAAATGGAATGCCAAAGAT+GGG | 0.629673 | 4.2:+47966299 | MS.gene89974:CDS |
| TCGCAAGATCGTAGCTCACA+TGG | 0.630015 | 4.2:+47969427 | MS.gene89974:CDS |
| CAAATTAGAGAAACAAGAGG+TGG | 0.630612 | 4.2:+47966348 | MS.gene89974:CDS |
| CCTCAGGAACCAAAATTGTG+AGG | 0.640518 | 4.2:-47969481 | None:intergenic |
| GGATGCTATGACTATGTGCA+TGG | 0.646576 | 4.2:+47970439 | MS.gene89974:CDS |
| TTATAAGGTTTCGATTGGAG+CGG | 0.647679 | 4.2:+47965671 | MS.gene89974:CDS |
| TCTGTGCTGCTGGAATCTGA+AGG | 0.654297 | 4.2:-47969199 | None:intergenic |
| CTGCTATCAATGAAGCAGGA+GGG | 0.660421 | 4.2:+47968816 | MS.gene89974:CDS |
| TACCAAATTAGAGAAACAAG+AGG | 0.669909 | 4.2:+47966345 | MS.gene89974:CDS |
| TTTGGAATACCTTAACAACA+GGG | 0.672446 | 4.2:-47965755 | None:intergenic |
| TCAGGAACCAAAATTGTGAG+GGG | 0.679056 | 4.2:-47969479 | None:intergenic |
| CAGGAACCAAAATTGTGAGG+GGG | 0.680810 | 4.2:-47969478 | None:intergenic |
| GCTGCTATCAATGAAGCAGG+AGG | 0.686088 | 4.2:+47968815 | MS.gene89974:CDS |
| GATGGAGATTATAAGGAACA+AGG | 0.689212 | 4.2:+47969260 | MS.gene89974:CDS |
| TGGATCACGAGTCGATCCGT+CGG | 0.693005 | 4.2:-47965711 | None:intergenic |
| GCTCTTCTAAGAAAATCAGG+AGG | 0.701297 | 4.2:-47966462 | None:intergenic |
| GTGGAAAGACAGAACAACAG+TGG | 0.702963 | 4.2:+47968838 | MS.gene89974:CDS |
| TCAACTCAGTCGGAACACCA+AGG | 0.719213 | 4.2:+47969555 | MS.gene89974:CDS |
| TAAGACTTGCTCGAACAGCG+AGG | 0.744360 | 4.2:-47968871 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAAAATGAAAAAACA+TGG | - | chr4.2:47965975-47965994 | None:intergenic | 10.0% |
| !! | ATTCTATAATAATTCTAATT+TGG | - | chr4.2:47970195-47970214 | None:intergenic | 10.0% |
| !! | GTTAATATAAAATTAAAAAG+TGG | + | chr4.2:47967331-47967350 | MS.gene89974:intron | 10.0% |
| !! | TTCTATAATAATTCTAATTT+GGG | - | chr4.2:47970194-47970213 | None:intergenic | 10.0% |
| !!! | AAAAATAAAAAAACTTTTGT+TGG | - | chr4.2:47966068-47966087 | None:intergenic | 10.0% |
| !!! | AAAATAAAAAAACTTTTGTT+GGG | - | chr4.2:47966067-47966086 | None:intergenic | 10.0% |
| !!! | AAAATCTAAATTATCAATTT+TGG | - | chr4.2:47966165-47966184 | None:intergenic | 10.0% |
| !!! | AAATCTAAATTATCAATTTT+GGG | - | chr4.2:47966164-47966183 | None:intergenic | 10.0% |
| !!! | AGATTTTTTTTAATTAAAAG+GGG | + | chr4.2:47966178-47966197 | MS.gene89974:intron | 10.0% |
| !!! | ATTAAATTAAGAAATAGTTT+TGG | - | chr4.2:47967989-47968008 | None:intergenic | 10.0% |
| !! | AAAGTGAAATATATTGTATT+GGG | + | chr4.2:47966903-47966922 | MS.gene89974:intron | 15.0% |
| !! | AATGAACTCATAATATTATA+AGG | + | chr4.2:47970212-47970231 | MS.gene89974:intron | 15.0% |
| !! | AATTTAGCAAAAATATTATG+TGG | + | chr4.2:47967484-47967503 | MS.gene89974:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+AGG | + | chr4.2:47966880-47966899 | MS.gene89974:intron | 15.0% |
| !! | ATTTAGCAAAAATATTATGT+GGG | + | chr4.2:47967485-47967504 | MS.gene89974:intron | 15.0% |
| !! | TAATTAGAGTTATATTGTAT+TGG | + | chr4.2:47966943-47966962 | MS.gene89974:intron | 15.0% |
| !! | TATTAAAAATTGAAATGACT+CGG | + | chr4.2:47966981-47967000 | MS.gene89974:intron | 15.0% |
| !! | TCTTAAAATGACATTAAATT+TGG | - | chr4.2:47965952-47965971 | None:intergenic | 15.0% |
| !! | TTACTAAAAAAATTACACTA+AGG | - | chr4.2:47968384-47968403 | None:intergenic | 15.0% |
| !!! | AAAAATTTGACTTGAATTTT+TGG | - | chr4.2:47965776-47965795 | None:intergenic | 15.0% |
| !!! | AATTTTGAAGTATCATATTA+GGG | + | chr4.2:47970321-47970340 | MS.gene89974:intron | 15.0% |
| !!! | ACTTTTTTACTTTTATGTTT+TGG | - | chr4.2:47968356-47968375 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTAATTAAAAGGG+GGG | + | chr4.2:47966180-47966199 | MS.gene89974:intron | 15.0% |
| !!! | GATTTTTTTTAATTAAAAGG+GGG | + | chr4.2:47966179-47966198 | MS.gene89974:intron | 15.0% |
| !!! | GTTTAATTTTGATATAATGT+CGG | + | chr4.2:47966585-47966604 | MS.gene89974:intron | 15.0% |
| !!! | TTTGGTAACTTTTTTTTTTA+CGG | + | chr4.2:47965592-47965611 | MS.gene89974:intron | 15.0% |
| !! | AACAATAAAAAAGACAAATC+TGG | + | chr4.2:47969840-47969859 | MS.gene89974:CDS | 20.0% |
| !! | AAGTCAAATTAAGATGATAT+GGG | + | chr4.2:47965278-47965297 | MS.gene89974:CDS | 20.0% |
| !! | ATAAAAATCATGTGTTTATG+TGG | + | chr4.2:47968182-47968201 | MS.gene89974:intron | 20.0% |
| !! | ATAATAATACTAAGTAGTAG+TGG | + | chr4.2:47968063-47968082 | MS.gene89974:intron | 20.0% |
| !! | ATAATGTTACAAATAAAACC+TGG | + | chr4.2:47967433-47967452 | MS.gene89974:intron | 20.0% |
| !! | CAATGTATCAAAATTAAACT+CGG | - | chr4.2:47966650-47966669 | None:intergenic | 20.0% |
| !! | CTTTAATCTAATAAAGTGTA+AGG | - | chr4.2:47968687-47968706 | None:intergenic | 20.0% |
| !! | GAAAGTGAAATATATTGTAT+TGG | + | chr4.2:47966902-47966921 | MS.gene89974:intron | 20.0% |
| !! | TAAAAATCATGTGTTTATGT+GGG | + | chr4.2:47968183-47968202 | MS.gene89974:intron | 20.0% |
| !! | TAATGTTACAAATAAAACCT+GGG | + | chr4.2:47967434-47967453 | MS.gene89974:intron | 20.0% |
| !! | TAGTAGAAAACTTTGATATT+TGG | - | chr4.2:47967789-47967808 | None:intergenic | 20.0% |
| !! | TCATTCATAATAATCATACT+TGG | + | chr4.2:47968010-47968029 | MS.gene89974:intron | 20.0% |
| !! | TTCAAAAATGGTACAATTAA+TGG | - | chr4.2:47965318-47965337 | None:intergenic | 20.0% |
| !! | TTCAATAAGTTAACATGTTT+AGG | + | chr4.2:47967720-47967739 | MS.gene89974:intron | 20.0% |
| !! | TTCGGAATATAAATCAAAAT+TGG | - | chr4.2:47969322-47969341 | None:intergenic | 20.0% |
| !! | TTTAGCAAAAATATTATGTG+GGG | + | chr4.2:47967486-47967505 | MS.gene89974:intron | 20.0% |
| !!! | ATATTCTAAAATCTTCTGTA+AGG | - | chr4.2:47970136-47970155 | None:intergenic | 20.0% |
| !!! | CAATTTTGAAGTATCATATT+AGG | + | chr4.2:47970320-47970339 | MS.gene89974:intron | 20.0% |
| !!! | GTTTTTTATATTGATTGTGT+AGG | + | chr4.2:47967168-47967187 | MS.gene89974:intron | 20.0% |
| !!! | TAAATTATCAATTTTGGGAT+TGG | - | chr4.2:47966159-47966178 | None:intergenic | 20.0% |
| !!! | TAATGTTGTTTTTCTATTAC+AGG | + | chr4.2:47965647-47965666 | MS.gene89974:intron | 20.0% |
| !!! | TATGGGTTTTGTTATTATTT+TGG | + | chr4.2:47965395-47965414 | MS.gene89974:CDS | 20.0% |
| !!! | TGGTGTTAGTTTATTTATTT+AGG | + | chr4.2:47968083-47968102 | MS.gene89974:intron | 20.0% |
| !!! | TGTTTTACTAATATTGAGAA+TGG | + | chr4.2:47968421-47968440 | MS.gene89974:intron | 20.0% |
| !!! | TTAACTTTAACTTTTTCACA+AGG | - | chr4.2:47968329-47968348 | None:intergenic | 20.0% |
| !!! | TTTTCTATTACAGGTTTATA+AGG | + | chr4.2:47965656-47965675 | MS.gene89974:intron | 20.0% |
| ! | AACAGAACATCATCAAAATT+CGG | - | chr4.2:47969340-47969359 | None:intergenic | 25.0% |
| ! | AACATGTTTAGGAAAGAAAA+TGG | + | chr4.2:47967731-47967750 | MS.gene89974:intron | 25.0% |
| ! | AAGGTATAATCCAAATTCAA+TGG | - | chr4.2:47969042-47969061 | None:intergenic | 25.0% |
| ! | AATAATAATATGTGTCAGTG+TGG | + | chr4.2:47967875-47967894 | MS.gene89974:intron | 25.0% |
| ! | ACTCATTGTACATTGAAAAT+AGG | - | chr4.2:47965845-47965864 | None:intergenic | 25.0% |
| ! | ATAATAATATGTGTCAGTGT+GGG | + | chr4.2:47967876-47967895 | MS.gene89974:intron | 25.0% |
| ! | ATATTCTAGCAAACCAATTA+GGG | - | chr4.2:47969763-47969782 | None:intergenic | 25.0% |
| ! | ATCTATAATGCAGTTAACTT+AGG | - | chr4.2:47968945-47968964 | None:intergenic | 25.0% |
| ! | ATCTGTGTGAAAAACTAAAT+TGG | - | chr4.2:47966858-47966877 | None:intergenic | 25.0% |
| ! | ATTAAAGGAATCTTGTAGTT+TGG | + | chr4.2:47970014-47970033 | MS.gene89974:intron | 25.0% |
| ! | ATTTGTCGATGAAAAACATA+AGG | - | chr4.2:47968585-47968604 | None:intergenic | 25.0% |
| ! | CAAAAAGAAAAAGTCATCTT+TGG | - | chr4.2:47968210-47968229 | None:intergenic | 25.0% |
| ! | CAAGTCAAATTAAGATGATA+TGG | + | chr4.2:47965277-47965296 | MS.gene89974:CDS | 25.0% |
| ! | CATAATAATCATACTTGGTT+AGG | + | chr4.2:47968015-47968034 | MS.gene89974:intron | 25.0% |
| ! | CATTAATAGGTATTTGTCAA+GGG | + | chr4.2:47967510-47967529 | MS.gene89974:intron | 25.0% |
| ! | CTCATTGTACATTGAAAATA+GGG | - | chr4.2:47965844-47965863 | None:intergenic | 25.0% |
| ! | GAAAACAAGATCCAAATTTA+TGG | + | chr4.2:47969899-47969918 | MS.gene89974:CDS | 25.0% |
| ! | TAAACACAAGCATTCAAAAA+TGG | - | chr4.2:47965330-47965349 | None:intergenic | 25.0% |
| ! | TAAATTGGGTCAGATAAATT+GGG | - | chr4.2:47966843-47966862 | None:intergenic | 25.0% |
| ! | TCATTAATAGGTATTTGTCA+AGG | + | chr4.2:47967509-47967528 | MS.gene89974:intron | 25.0% |
| ! | TCTGTGTGAAAAACTAAATT+GGG | - | chr4.2:47966857-47966876 | None:intergenic | 25.0% |
| ! | TGACATAAGAAATGAAAAGA+GGG | - | chr4.2:47967958-47967977 | None:intergenic | 25.0% |
| ! | TGTTTACATTTCATTAGCAA+TGG | + | chr4.2:47965344-47965363 | MS.gene89974:CDS | 25.0% |
| ! | TTCATGGAAAGAGTTTATAT+GGG | + | chr4.2:47965378-47965397 | MS.gene89974:CDS | 25.0% |
| ! | TTTACCTTACCTAATGATAT+TGG | + | chr4.2:47968285-47968304 | MS.gene89974:intron | 25.0% |
| ! | TTTCATGGAAAGAGTTTATA+TGG | + | chr4.2:47965377-47965396 | MS.gene89974:CDS | 25.0% |
| !! | AATTTCTAGATTCATAGTGT+CGG | + | chr4.2:47967085-47967104 | MS.gene89974:intron | 25.0% |
| !! | CTTACTAATGATTCGTATTT+TGG | + | chr4.2:47968756-47968775 | MS.gene89974:intron | 25.0% |
| !! | CTTTTTCTTTTTGTACCTTT+TGG | + | chr4.2:47968217-47968236 | MS.gene89974:intron | 25.0% |
| !! | TTTCTTTTGAACTTTGACAT+TGG | - | chr4.2:47969883-47969902 | None:intergenic | 25.0% |
| !! | TTTGTTCTTTTGGATTCTTT+TGG | + | chr4.2:47965574-47965593 | MS.gene89974:intron | 25.0% |
| !!! | AATGAGTTTTGACATAATCA+CGG | - | chr4.2:47969646-47969665 | None:intergenic | 25.0% |
| !!! | ATTTTGATGATGTTCTGTTT+TGG | + | chr4.2:47969341-47969360 | MS.gene89974:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr4.2:47967012-47967031 | MS.gene89974:intron | 25.0% |
| !!! | GTTATTTTGTTGTTTCTAGT+AGG | + | chr4.2:47970083-47970102 | MS.gene89974:intron | 25.0% |
| !!! | GTTCTTTGTTTTTGTTCTTT+TGG | + | chr4.2:47965564-47965583 | MS.gene89974:intron | 25.0% |
| !!! | TAATTGGTTTGCTAGAATAT+GGG | + | chr4.2:47969763-47969782 | MS.gene89974:CDS | 25.0% |
| !!! | TAGGGTTCTAATTTTTGTTA+TGG | + | chr4.2:47970339-47970358 | MS.gene89974:intron | 25.0% |
| !!! | TTATTTTGGTTAAGCTCTTT+TGG | + | chr4.2:47965409-47965428 | MS.gene89974:CDS | 25.0% |
| !!! | TTTAACTTTTTCACAAGGTA+AGG | - | chr4.2:47968324-47968343 | None:intergenic | 25.0% |
| AAAGGATCCAATAGAACAAA+AGG | - | chr4.2:47969704-47969723 | None:intergenic | 30.0% | |
| AAATGGAACAAGGGTAAAAA+TGG | + | chr4.2:47967748-47967767 | MS.gene89974:intron | 30.0% | |
| AACTGACCTTTCCATAAATT+TGG | - | chr4.2:47969913-47969932 | None:intergenic | 30.0% | |
| AAGAAAATGCAGATCCTTAT+TGG | - | chr4.2:47965820-47965839 | None:intergenic | 30.0% | |
| AAGTCAAACAAGGACAAAAT+TGG | - | chr4.2:47967215-47967234 | None:intergenic | 30.0% | |
| AATGCATAATTCCGTTACAA+TGG | - | chr4.2:47968247-47968266 | None:intergenic | 30.0% | |
| AATGGAACAAGGGTAAAAAT+GGG | + | chr4.2:47967749-47967768 | MS.gene89974:intron | 30.0% | |
| AATTCTTCAATCACCCAATA+AGG | + | chr4.2:47965803-47965822 | MS.gene89974:intron | 30.0% | |
| AGAAAATGCAGATCCTTATT+GGG | - | chr4.2:47965819-47965838 | None:intergenic | 30.0% | |
| AGAAAATGGATCAGATATTC+CGG | + | chr4.2:47967026-47967045 | MS.gene89974:intron | 30.0% | |
| ATGACCAATATCATTAGGTA+AGG | - | chr4.2:47968292-47968311 | None:intergenic | 30.0% | |
| ATTACCAACAAGAAAAGGAA+TGG | - | chr4.2:47966487-47966506 | None:intergenic | 30.0% | |
| ATTGTGTATAGATCCAATGT+GGG | + | chr4.2:47967582-47967601 | MS.gene89974:intron | 30.0% | |
| CAAGATCCAAATTTATGGAA+AGG | + | chr4.2:47969904-47969923 | MS.gene89974:CDS | 30.0% | |
| CATATTCTAGCAAACCAATT+AGG | - | chr4.2:47969764-47969783 | None:intergenic | 30.0% | |
| CATCGACAAATGTTAGTAAT+TGG | + | chr4.2:47968594-47968613 | MS.gene89974:intron | 30.0% | |
| CTAAATTGGGTCAGATAAAT+TGG | - | chr4.2:47966844-47966863 | None:intergenic | 30.0% | |
| CTTAGGATATAAGATTTACC+TGG | - | chr4.2:47968928-47968947 | None:intergenic | 30.0% | |
| GACTCTGGTATATAAACTTT+AGG | - | chr4.2:47965234-47965253 | None:intergenic | 30.0% | |
| GTGAACTATAGTACAAAACT+AGG | - | chr4.2:47970291-47970310 | None:intergenic | 30.0% | |
| GTGACATAAGAAATGAAAAG+AGG | - | chr4.2:47967959-47967978 | None:intergenic | 30.0% | |
| GTTTGCCTATAACAAGAAAA+TGG | - | chr4.2:47969154-47969173 | None:intergenic | 30.0% | |
| TACCAAATTAGAGAAACAAG+AGG | + | chr4.2:47966345-47966364 | MS.gene89974:CDS | 30.0% | |
| TAGGAAAGAAAATGGAACAA+GGG | + | chr4.2:47967739-47967758 | MS.gene89974:intron | 30.0% | |
| TAGTTTGGCCAATAATTTGA+TGG | + | chr4.2:47970029-47970048 | MS.gene89974:intron | 30.0% | |
| TATCATATCCATCTTTAGTG+CGG | + | chr4.2:47969600-47969619 | MS.gene89974:intron | 30.0% | |
| TATTATGTGGGGTCATTAAT+AGG | + | chr4.2:47967497-47967516 | MS.gene89974:intron | 30.0% | |
| TATTGTGTATAGATCCAATG+TGG | + | chr4.2:47967581-47967600 | MS.gene89974:intron | 30.0% | |
| TCATACTTATAACGTTGTTC+AGG | - | chr4.2:47965441-47965460 | None:intergenic | 30.0% | |
| TCCTTCAACCATCAAATTAT+TGG | - | chr4.2:47970040-47970059 | None:intergenic | 30.0% | |
| TGGATTATACCTTAATTCAG+CGG | + | chr4.2:47969049-47969068 | MS.gene89974:intron | 30.0% | |
| TTAGGAAAGAAAATGGAACA+AGG | + | chr4.2:47967738-47967757 | MS.gene89974:intron | 30.0% | |
| ! | AAGCTTTTACAAAATTACCG+TGG | + | chr4.2:47965913-47965932 | MS.gene89974:intron | 30.0% |
| ! | ATTGTAGGATTTGGTTATGT+TGG | + | chr4.2:47970511-47970530 | MS.gene89974:CDS | 30.0% |
| ! | CAATTCACCTTTTGTTCTAT+TGG | + | chr4.2:47969694-47969713 | MS.gene89974:CDS | 30.0% |
| ! | TCTTGATGACCAATATCATT+AGG | - | chr4.2:47968297-47968316 | None:intergenic | 30.0% |
| ! | TGATTTGAGTTCCAAACAAA+GGG | + | chr4.2:47970256-47970275 | MS.gene89974:intron | 30.0% |
| ! | TTCTTTTTGTACCTTTTGGT+TGG | + | chr4.2:47968221-47968240 | MS.gene89974:intron | 30.0% |
| ! | TTTGGAATACCTTAACAACA+GGG | - | chr4.2:47965758-47965777 | None:intergenic | 30.0% |
| ! | TTTTCTACTAGTTCCATCAA+AGG | + | chr4.2:47967799-47967818 | MS.gene89974:intron | 30.0% |
| !! | AATTCTAAAGTATGAGTCGT+TGG | - | chr4.2:47967302-47967321 | None:intergenic | 30.0% |
| !! | AATTTTGTCCTTGTTTGACT+TGG | + | chr4.2:47967214-47967233 | MS.gene89974:intron | 30.0% |
| !! | ATTTTGTCCTTGTTTGACTT+GGG | + | chr4.2:47967215-47967234 | MS.gene89974:intron | 30.0% |
| !! | CTAATTGGTTTGCTAGAATA+TGG | + | chr4.2:47969762-47969781 | MS.gene89974:CDS | 30.0% |
| !! | GTGGTTTTGCAGTATATTTA+GGG | + | chr4.2:47967832-47967851 | MS.gene89974:intron | 30.0% |
| !!! | AACTTTGACATTGGTTTTCT+TGG | - | chr4.2:47969874-47969893 | None:intergenic | 30.0% |
| !!! | TGAAATGACTCGGTTATTTT+GGG | + | chr4.2:47966991-47967010 | MS.gene89974:intron | 30.0% |
| !!! | TGTTGCCATTTTCTTGTTAT+AGG | + | chr4.2:47969146-47969165 | MS.gene89974:intron | 30.0% |
| !!! | TTGAAATGACTCGGTTATTT+TGG | + | chr4.2:47966990-47967009 | MS.gene89974:intron | 30.0% |
| !!! | TTTTGGAATACCTTAACAAC+AGG | - | chr4.2:47965759-47965778 | None:intergenic | 30.0% |
| AAAACAAACCCTTCAATCAC+GGG | + | chr4.2:47967267-47967286 | MS.gene89974:intron | 35.0% | |
| AAATATACTGCAAAACCACG+TGG | - | chr4.2:47967831-47967850 | None:intergenic | 35.0% | |
| AAATATCGACCGCTGAATTA+AGG | - | chr4.2:47969061-47969080 | None:intergenic | 35.0% | |
| AAATGGCGATGGAGATTATA+AGG | + | chr4.2:47969253-47969272 | MS.gene89974:CDS | 35.0% | |
| AAGAATGCAAGAGATGTCTT+TGG | + | chr4.2:47968481-47968500 | MS.gene89974:CDS | 35.0% | |
| AAGACATGACATTCTCGAAA+AGG | - | chr4.2:47969722-47969741 | None:intergenic | 35.0% | |
| AAGGTAAAGTACACTATCAC+AGG | - | chr4.2:47968273-47968292 | None:intergenic | 35.0% | |
| AATATACTGCAAAACCACGT+GGG | - | chr4.2:47967830-47967849 | None:intergenic | 35.0% | |
| ACCAAATCCTACAATTGAGA+AGG | - | chr4.2:47970506-47970525 | None:intergenic | 35.0% | |
| ACCTCTCTTTCATTGAACAT+TGG | - | chr4.2:47965525-47965544 | None:intergenic | 35.0% | |
| ACCTTAACCTTCTCAATTGT+AGG | + | chr4.2:47970496-47970515 | MS.gene89974:CDS | 35.0% | |
| ACCTTCTCAATTGTAGGATT+TGG | + | chr4.2:47970502-47970521 | MS.gene89974:CDS | 35.0% | |
| AGGATATAAGATTTACCTGG+AGG | - | chr4.2:47968925-47968944 | None:intergenic | 35.0% | |
| AGTTCTTCATCATCTTGAAG+AGG | - | chr4.2:47965465-47965484 | None:intergenic | 35.0% | |
| ATAGAAAATTAAGCGCACCT+TGG | - | chr4.2:47969575-47969594 | None:intergenic | 35.0% | |
| ATCTTCTGTCATGTGCATAA+TGG | - | chr4.2:47970161-47970180 | None:intergenic | 35.0% | |
| ATGTGGGTCAACTCAAAAAT+AGG | + | chr4.2:47967598-47967617 | MS.gene89974:intron | 35.0% | |
| CAAACTTCGACCATTGAATT+TGG | + | chr4.2:47969029-47969048 | MS.gene89974:intron | 35.0% | |
| CAAATTAGAGAAACAAGAGG+TGG | + | chr4.2:47966348-47966367 | MS.gene89974:CDS | 35.0% | |
| CACATTCTACATCTTCATTG+TGG | + | chr4.2:47969963-47969982 | MS.gene89974:intron | 35.0% | |
| CAGGTTTATAAGGTTTCGAT+TGG | + | chr4.2:47965666-47965685 | MS.gene89974:intron | 35.0% | |
| CAGTAGAATCATCAAGTACT+TGG | - | chr4.2:47965734-47965753 | None:intergenic | 35.0% | |
| CTTCAAGATGATGAAGAACT+TGG | + | chr4.2:47965465-47965484 | MS.gene89974:CDS | 35.0% | |
| GAAAACAAACCCTTCAATCA+CGG | + | chr4.2:47967266-47967285 | MS.gene89974:intron | 35.0% | |
| GAAAATGGATCAGATATTCC+GGG | + | chr4.2:47967027-47967046 | MS.gene89974:intron | 35.0% | |
| GATAATGCACCCAAATATGT+CGG | - | chr4.2:47968650-47968669 | None:intergenic | 35.0% | |
| GATGGAGATTATAAGGAACA+AGG | + | chr4.2:47969260-47969279 | MS.gene89974:CDS | 35.0% | |
| GGAATTTGAACAAGAACAAC+AGG | - | chr4.2:47965504-47965523 | None:intergenic | 35.0% | |
| GGATTTGAACCGACATATTT+GGG | + | chr4.2:47968638-47968657 | MS.gene89974:intron | 35.0% | |
| GGTCAACTCAAAAATAGGAA+CGG | + | chr4.2:47967603-47967622 | MS.gene89974:intron | 35.0% | |
| GTCAACTCAAAAATAGGAAC+GGG | + | chr4.2:47967604-47967623 | MS.gene89974:intron | 35.0% | |
| TAGTTCACTTGAAATGACTC+TGG | - | chr4.2:47965249-47965268 | None:intergenic | 35.0% | |
| TCAGGATTACCAACAAGAAA+AGG | - | chr4.2:47966492-47966511 | None:intergenic | 35.0% | |
| TCATGAATGAATGCAGCAAA+TGG | + | chr4.2:47966275-47966294 | MS.gene89974:intron | 35.0% | |
| TCCAATGTTCAATGAAAGAG+AGG | + | chr4.2:47965521-47965540 | MS.gene89974:CDS | 35.0% | |
| TCCTACAATTGAGAAGGTTA+AGG | - | chr4.2:47970500-47970519 | None:intergenic | 35.0% | |
| TGAGGTTCATGTTCCAATTT+GGG | + | chr4.2:47969499-47969518 | MS.gene89974:CDS | 35.0% | |
| TGGATTTGAACCGACATATT+TGG | + | chr4.2:47968637-47968656 | MS.gene89974:intron | 35.0% | |
| TGTTACAAATAAAACCTGGG+CGG | + | chr4.2:47967437-47967456 | MS.gene89974:intron | 35.0% | |
| TTATAAGGTTTCGATTGGAG+CGG | + | chr4.2:47965671-47965690 | MS.gene89974:CDS | 35.0% | |
| TTGAGAAGGTTAAGGTTTGA+AGG | - | chr4.2:47970492-47970511 | None:intergenic | 35.0% | |
| TTTACAAAATTACCGTGGCT+CGG | + | chr4.2:47965918-47965937 | MS.gene89974:intron | 35.0% | |
| ! | AACAGAGTCTCCAAGTTTTT+CGG | - | chr4.2:47969811-47969830 | None:intergenic | 35.0% |
| ! | AATGGCACTTATGCTTTTCA+TGG | + | chr4.2:47965362-47965381 | MS.gene89974:CDS | 35.0% |
| ! | ATGGCTCTTCTAAGAAAATC+AGG | - | chr4.2:47966468-47966487 | None:intergenic | 35.0% |
| ! | CACCTCTTGTTTCTCTAATT+TGG | - | chr4.2:47966350-47966369 | None:intergenic | 35.0% |
| ! | GATTTGAGTTCCAAACAAAG+GGG | + | chr4.2:47970257-47970276 | MS.gene89974:intron | 35.0% |
| ! | GCCAATAATTTGATGGTTGA+AGG | + | chr4.2:47970036-47970055 | MS.gene89974:intron | 35.0% |
| ! | GGATGGAAATTTTTGTACCT+TGG | + | chr4.2:47968896-47968915 | MS.gene89974:CDS | 35.0% |
| ! | GTGATTTGAGTTCCAAACAA+AGG | + | chr4.2:47970255-47970274 | MS.gene89974:intron | 35.0% |
| ! | TCTTTTGTCAAACATGACTG+TGG | + | chr4.2:47968712-47968731 | MS.gene89974:intron | 35.0% |
| !! | ATGTGTTTTTGAACATGAGC+AGG | + | chr4.2:47970371-47970390 | MS.gene89974:intron | 35.0% |
| !! | CGTGGTTTTGCAGTATATTT+AGG | + | chr4.2:47967831-47967850 | MS.gene89974:intron | 35.0% |
| !!! | ATTTTTGAGTTGACCCACAT+TGG | - | chr4.2:47967598-47967617 | None:intergenic | 35.0% |
| !!! | TATTTTGGAACCTGAATGCA+GGG | + | chr4.2:47968771-47968790 | MS.gene89974:intron | 35.0% |
| AAAGCAGGTGCATTGAAAGA+AGG | + | chr4.2:47966375-47966394 | MS.gene89974:CDS | 40.0% | |
| AATATGGGAGGGCTAATGAA+TGG | + | chr4.2:47969778-47969797 | MS.gene89974:CDS | 40.0% | |
| AGAGGGAATAGTTGAAGTGT+CGG | - | chr4.2:47967941-47967960 | None:intergenic | 40.0% | |
| AGCAGCAATTCTCCAAATAC+CGG | - | chr4.2:47968801-47968820 | None:intergenic | 40.0% | |
| AGGCTTAATTTCTTGGAGCT+AGG | + | chr4.2:47970391-47970410 | MS.gene89974:intron | 40.0% | |
| AGGTTAAGGTTTGAAGGAAG+AGG | - | chr4.2:47970486-47970505 | None:intergenic | 40.0% | |
| ATATGGGAGGGCTAATGAAT+GGG | + | chr4.2:47969779-47969798 | MS.gene89974:CDS | 40.0% | |
| ATCACCATTCTCAACTCAGT+CGG | + | chr4.2:47969545-47969564 | MS.gene89974:CDS | 40.0% | |
| ATGTAAACAGCTCCCCAAAT+TGG | - | chr4.2:47969515-47969534 | None:intergenic | 40.0% | |
| ATTGCTGCTATCAATGAAGC+AGG | + | chr4.2:47968812-47968831 | MS.gene89974:CDS | 40.0% | |
| CAAATTGGAACATGAACCTC+AGG | - | chr4.2:47969500-47969519 | None:intergenic | 40.0% | |
| CAAGATGATGAAGAACTTGG+TGG | + | chr4.2:47965468-47965487 | MS.gene89974:CDS | 40.0% | |
| CAGAACAACAGTGGAAGATA+TGG | + | chr4.2:47968847-47968866 | MS.gene89974:CDS | 40.0% | |
| CATGAGCAGGCTTAATTTCT+TGG | + | chr4.2:47970384-47970403 | MS.gene89974:intron | 40.0% | |
| CCTGAAATTGCTCTTGTTCA+AGG | + | chr4.2:47966507-47966526 | MS.gene89974:CDS | 40.0% | |
| CCTTGAACAAGAGCAATTTC+AGG | - | chr4.2:47966510-47966529 | None:intergenic | 40.0% | |
| CTCAGGAACCAAAATTGTGA+GGG | - | chr4.2:47969483-47969502 | None:intergenic | 40.0% | |
| CTGAGGTTCATGTTCCAATT+TGG | + | chr4.2:47969498-47969517 | MS.gene89974:CDS | 40.0% | |
| CTTCTTGCTCAACTGTGAAA+TGG | - | chr4.2:47968511-47968530 | None:intergenic | 40.0% | |
| GAGGTTCATGTTCCAATTTG+GGG | + | chr4.2:47969500-47969519 | MS.gene89974:CDS | 40.0% | |
| GCTGCAAAAGATTATGAGCT+AGG | - | chr4.2:47968992-47969011 | None:intergenic | 40.0% | |
| GGAAATGGAATGCCAAAGAT+GGG | + | chr4.2:47966299-47966318 | MS.gene89974:CDS | 40.0% | |
| GGACAAAATTCCCCTTTGTT+TGG | - | chr4.2:47970270-47970289 | None:intergenic | 40.0% | |
| GTGTACAGAAAGTGAAGTTC+TGG | + | chr4.2:47969369-47969388 | MS.gene89974:intron | 40.0% | |
| GTTGGGACTATCACTTTGAA+TGG | - | chr4.2:47966050-47966069 | None:intergenic | 40.0% | |
| TCAGCTACTCATGCTTTCTT+TGG | + | chr4.2:47968536-47968555 | MS.gene89974:CDS | 40.0% | |
| TCAGGAACCAAAATTGTGAG+GGG | - | chr4.2:47969482-47969501 | None:intergenic | 40.0% | |
| TCGTTAGTCATGCGAATATG+TGG | + | chr4.2:47968617-47968636 | MS.gene89974:intron | 40.0% | |
| TGAATGAATGCAGCAAATGG+TGG | + | chr4.2:47966278-47966297 | MS.gene89974:intron | 40.0% | |
| TGAATTGACCGCACTAAAGA+TGG | - | chr4.2:47969611-47969630 | None:intergenic | 40.0% | |
| TGCTAATCTGTTCCGCAAAA+TGG | + | chr4.2:47969236-47969255 | MS.gene89974:CDS | 40.0% | |
| TGGAAATGGAATGCCAAAGA+TGG | + | chr4.2:47966298-47966317 | MS.gene89974:CDS | 40.0% | |
| TTCACAGTTGAGCAAGAAGT+TGG | + | chr4.2:47968512-47968531 | MS.gene89974:CDS | 40.0% | |
| TTCCTTTACTTGCCCATCTT+TGG | - | chr4.2:47966314-47966333 | None:intergenic | 40.0% | |
| TTCTACTGACCCTGTTGTTA+AGG | + | chr4.2:47965746-47965765 | MS.gene89974:CDS | 40.0% | |
| TTGGGTCAGATAAATTGGGA+CGG | - | chr4.2:47966839-47966858 | None:intergenic | 40.0% | |
| ! | AATGCAGCAAATGGTGGAAA+TGG | + | chr4.2:47966284-47966303 | MS.gene89974:intron | 40.0% |
| ! | AGAGCCATTCCTTTTCTTGT+TGG | + | chr4.2:47966480-47966499 | MS.gene89974:CDS | 40.0% |
| ! | ATTTTGCGGAACAGATTAGC+AGG | - | chr4.2:47969237-47969256 | None:intergenic | 40.0% |
| ! | CATGCTTTCTTTGGCTTCAA+TGG | + | chr4.2:47968545-47968564 | MS.gene89974:CDS | 40.0% |
| ! | CTTCTAAGAAAATCAGGAGG+AGG | - | chr4.2:47966462-47966481 | None:intergenic | 40.0% |
| ! | GCTCTTCTAAGAAAATCAGG+AGG | - | chr4.2:47966465-47966484 | None:intergenic | 40.0% |
| ! | TCATCGTGTGAAACTTTTGC+AGG | + | chr4.2:47969670-47969689 | MS.gene89974:intron | 40.0% |
| ! | TGAGTTGAGAATGGTGATGA+TGG | - | chr4.2:47969543-47969562 | None:intergenic | 40.0% |
| ! | TGTAATCCCCCTCACAATTT+TGG | + | chr4.2:47969472-47969491 | MS.gene89974:CDS | 40.0% |
| ! | TTCTAGATTCATAGTGTCGG+TGG | + | chr4.2:47967088-47967107 | MS.gene89974:intron | 40.0% |
| !! | CTTTTGGTTGGCCATTGTAA+CGG | + | chr4.2:47968233-47968252 | MS.gene89974:intron | 40.0% |
| !! | GATTGAAGGGTTTGTTTTCG+TGG | - | chr4.2:47967265-47967284 | None:intergenic | 40.0% |
| !! | GCAGTGTTTCTGTTCTTTTG+TGG | + | chr4.2:47970418-47970437 | MS.gene89974:CDS | 40.0% |
| !! | TAATCTCCATCGCCATTTTG+CGG | - | chr4.2:47969251-47969270 | None:intergenic | 40.0% |
| !! | TAATTAAAAGGGGGGTGTTG+AGG | + | chr4.2:47966188-47966207 | MS.gene89974:intron | 40.0% |
| !! | TGGTTTGCTAGAATATGGGA+GGG | + | chr4.2:47969767-47969786 | MS.gene89974:CDS | 40.0% |
| !! | TTGAGAATGGTGATGATGGA+AGG | - | chr4.2:47969539-47969558 | None:intergenic | 40.0% |
| !! | TTGGTTTGCTAGAATATGGG+AGG | + | chr4.2:47969766-47969785 | MS.gene89974:CDS | 40.0% |
| !!! | GTATTTTGGAACCTGAATGC+AGG | + | chr4.2:47968770-47968789 | MS.gene89974:intron | 40.0% |
| AAACCCTTCAATCACGGGTA+GGG | + | chr4.2:47967272-47967291 | MS.gene89974:intron | 45.0% | |
| AAGGTCGACCATAAGACACA+TGG | - | chr4.2:47967907-47967926 | None:intergenic | 45.0% | |
| ACAAGAGGTGGATACAAAGC+AGG | + | chr4.2:47966360-47966379 | MS.gene89974:CDS | 45.0% | |
| ACTAAATATCATAGCCGCCC+AGG | - | chr4.2:47967454-47967473 | None:intergenic | 45.0% | |
| ATGGATCAGATATTCCGGGA+CGG | + | chr4.2:47967031-47967050 | MS.gene89974:intron | 45.0% | |
| CAAACCAATTAGGGTCGCTT+TGG | - | chr4.2:47969754-47969773 | None:intergenic | 45.0% | |
| CAGGAACCAAAATTGTGAGG+GGG | - | chr4.2:47969481-47969500 | None:intergenic | 45.0% | |
| CCTCAGGAACCAAAATTGTG+AGG | - | chr4.2:47969484-47969503 | None:intergenic | 45.0% | |
| CGAAGTTTGACTACATCGAC+TGG | - | chr4.2:47969018-47969037 | None:intergenic | 45.0% | |
| CGTTACAATGGCCAACCAAA+AGG | - | chr4.2:47968235-47968254 | None:intergenic | 45.0% | |
| CTCACACTAGCTGGCATTAA+AGG | + | chr4.2:47969999-47970018 | MS.gene89974:intron | 45.0% | |
| CTGCTATCAATGAAGCAGGA+GGG | + | chr4.2:47968816-47968835 | MS.gene89974:CDS | 45.0% | |
| GGATGCTATGACTATGTGCA+TGG | + | chr4.2:47970439-47970458 | MS.gene89974:CDS | 45.0% | |
| GTCAGATAAATTGGGACGGA+GGG | - | chr4.2:47966835-47966854 | None:intergenic | 45.0% | |
| GTGGAAAGACAGAACAACAG+TGG | + | chr4.2:47968838-47968857 | MS.gene89974:CDS | 45.0% | |
| GTTCAAGGTCGTTGGAGATT+TGG | + | chr4.2:47966522-47966541 | MS.gene89974:CDS | 45.0% | |
| TGCCAAAGATGGGCAAGTAA+AGG | + | chr4.2:47966309-47966328 | MS.gene89974:CDS | 45.0% | |
| TGGGTTGTGACCGAAAAACT+TGG | + | chr4.2:47969798-47969817 | MS.gene89974:CDS | 45.0% | |
| TTCTGTAAGGCTCATGTGCA+TGG | - | chr4.2:47970123-47970142 | None:intergenic | 45.0% | |
| TTGCTCTTGTTCAAGGTCGT+TGG | + | chr4.2:47966514-47966533 | MS.gene89974:CDS | 45.0% | |
| TTGGCAAAATTACCGAGCCA+CGG | - | chr4.2:47965933-47965952 | None:intergenic | 45.0% | |
| ! | CAATTAGGGTCGCTTTGGTA+CGG | - | chr4.2:47969749-47969768 | None:intergenic | 45.0% |
| ! | TGTTCCGACTGAGTTGAGAA+TGG | - | chr4.2:47969552-47969571 | None:intergenic | 45.0% |
| !! | AGTTGAAGTGTCGGCAAGAA+AGG | - | chr4.2:47967932-47967951 | None:intergenic | 45.0% |
| !! | GTTGAAGTGTCGGCAAGAAA+GGG | - | chr4.2:47967931-47967950 | None:intergenic | 45.0% |
| !! | TTGTTTGACTTGGGTTAGCC+CGG | + | chr4.2:47967224-47967243 | MS.gene89974:intron | 45.0% |
| !!! | CCTCACAATTTTGGTTCCTG+AGG | + | chr4.2:47969481-47969500 | MS.gene89974:CDS | 45.0% |
| !!! | AATGTAATTTTTATTAAAAT+CGG | - | chr4.2:47965890-47965909 | None:intergenic | 5.0% |
| !!! | TAGATTTTTTTTAATTAAAA+GGG | + | chr4.2:47966177-47966196 | MS.gene89974:intron | 5.0% |
| !!! | TTAGATTTTTTTTAATTAAA+AGG | + | chr4.2:47966176-47966195 | MS.gene89974:intron | 5.0% |
| !!! | TTTTTTTAGTAATAAAATTA+AGG | + | chr4.2:47968392-47968411 | MS.gene89974:intron | 5.0% |
| AAACGTTACTACCTCCGTCC+CGG | - | chr4.2:47967048-47967067 | None:intergenic | 50.0% | |
| CAAACCCTTCAATCACGGGT+AGG | + | chr4.2:47967271-47967290 | MS.gene89974:intron | 50.0% | |
| CACTTGTCACTCACACTAGC+TGG | + | chr4.2:47969990-47970009 | MS.gene89974:intron | 50.0% | |
| CGCTGTTCGAGCAAGTCTTA+GGG | + | chr4.2:47968874-47968893 | MS.gene89974:CDS | 50.0% | |
| CGTACCAAAGCGACCCTAAT+TGG | + | chr4.2:47969747-47969766 | MS.gene89974:CDS | 50.0% | |
| CTATCAATGAAGCAGGAGGG+TGG | + | chr4.2:47968819-47968838 | MS.gene89974:CDS | 50.0% | |
| GAGCTACGATCTTGCGAACA+AGG | - | chr4.2:47969424-47969443 | None:intergenic | 50.0% | |
| GATTTACCTGGAGGTCTCCA+AGG | - | chr4.2:47968916-47968935 | None:intergenic | 50.0% | |
| GCTGCTATCAATGAAGCAGG+AGG | + | chr4.2:47968815-47968834 | MS.gene89974:CDS | 50.0% | |
| GCTGTTCGAGCAAGTCTTAG+GGG | + | chr4.2:47968875-47968894 | MS.gene89974:CDS | 50.0% | |
| GGGCTAACCCAAGTCAAACA+AGG | - | chr4.2:47967225-47967244 | None:intergenic | 50.0% | |
| GGGTAGCACCATGTGTCTTA+TGG | + | chr4.2:47967896-47967915 | MS.gene89974:intron | 50.0% | |
| GGTCAGATAAATTGGGACGG+AGG | - | chr4.2:47966836-47966855 | None:intergenic | 50.0% | |
| GTTCCCTACCCGTGATTGAA+GGG | - | chr4.2:47967278-47967297 | None:intergenic | 50.0% | |
| TCAACTCAGTCGGAACACCA+AGG | + | chr4.2:47969555-47969574 | MS.gene89974:CDS | 50.0% | |
| TCGCAAGATCGTAGCTCACA+TGG | + | chr4.2:47969427-47969446 | MS.gene89974:CDS | 50.0% | |
| TCGCTGTTCGAGCAAGTCTT+AGG | + | chr4.2:47968873-47968892 | MS.gene89974:CDS | 50.0% | |
| TCTGTTCCGCAAAATGGCGA+TGG | + | chr4.2:47969242-47969261 | MS.gene89974:CDS | 50.0% | |
| TGTTCCCTACCCGTGATTGA+AGG | - | chr4.2:47967279-47967298 | None:intergenic | 50.0% | |
| TTAGCCCGGTTTAGGGGAAT+GGG | + | chr4.2:47967238-47967257 | MS.gene89974:intron | 50.0% | |
| TTCGAGCAAGTCTTAGGGGA+TGG | + | chr4.2:47968879-47968898 | MS.gene89974:CDS | 50.0% | |
| TTGGAACCTGAATGCAGGGA+CGG | + | chr4.2:47968775-47968794 | MS.gene89974:intron | 50.0% | |
| TTTCGATTGGAGCGGCTTGT+GGG | + | chr4.2:47965679-47965698 | MS.gene89974:CDS | 50.0% | |
| TTTGTACCTTGGAGACCTCC+AGG | + | chr4.2:47968907-47968926 | MS.gene89974:CDS | 50.0% | |
| ! | CTGAAGGCTCTCAGAGTACT+TGG | - | chr4.2:47969186-47969205 | None:intergenic | 50.0% |
| ! | TAAGACTTGCTCGAACAGCG+AGG | - | chr4.2:47968874-47968893 | None:intergenic | 50.0% |
| !! | ACTTGGGTTAGCCCGGTTTA+GGG | + | chr4.2:47967231-47967250 | MS.gene89974:intron | 50.0% |
| !! | AGTGTCGGCAAGAAAGGGTA+AGG | - | chr4.2:47967926-47967945 | None:intergenic | 50.0% |
| GATCAGATATTCCGGGACGG+AGG | + | chr4.2:47967034-47967053 | MS.gene89974:intron | 55.0% | |
| GTGGACCCATTCCCCTAAAC+CGG | - | chr4.2:47967246-47967265 | None:intergenic | 55.0% | |
| GTTAGCCCGGTTTAGGGGAA+TGG | + | chr4.2:47967237-47967256 | MS.gene89974:intron | 55.0% | |
| GTTTCGATTGGAGCGGCTTG+TGG | + | chr4.2:47965678-47965697 | MS.gene89974:CDS | 55.0% | |
| TGGACCCATTCCCCTAAACC+GGG | - | chr4.2:47967245-47967264 | None:intergenic | 55.0% | |
| TGGATCACGAGTCGATCCGT+CGG | - | chr4.2:47965714-47965733 | None:intergenic | 55.0% | |
| TTGTGGGCTTTCATGGCCGA+CGG | + | chr4.2:47965695-47965714 | MS.gene89974:CDS | 55.0% | |
| !! | CACGTGGGAAGTGCCTTTGA+TGG | - | chr4.2:47967815-47967834 | None:intergenic | 55.0% |
| !! | CATCAAAGGCACTTCCCACG+TGG | + | chr4.2:47967813-47967832 | MS.gene89974:intron | 55.0% |
| !! | CTTGGGTTAGCCCGGTTTAG+GGG | + | chr4.2:47967232-47967251 | MS.gene89974:intron | 55.0% |
| !! | GACTTGGGTTAGCCCGGTTT+AGG | + | chr4.2:47967230-47967249 | MS.gene89974:intron | 55.0% |
| !! | TCATAGTGTCGGTGGCTTGC+TGG | + | chr4.2:47967096-47967115 | MS.gene89974:intron | 55.0% |
| AACCTGAATGCAGGGACGGC+CGG | + | chr4.2:47968779-47968798 | MS.gene89974:intron | 60.0% | |
| ATGCAGGGACGGCCGGTATT+TGG | + | chr4.2:47968786-47968805 | MS.gene89974:intron | 60.0% | |
| GAGCGGCTTGTGGGCTTTCA+TGG | + | chr4.2:47965688-47965707 | MS.gene89974:CDS | 60.0% | |
| TACCGGCCGTCCCTGCATTC+AGG | - | chr4.2:47968784-47968803 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 47965216 | 47970546 | 47965216 | ID=MS.gene89974 |
| chr4.2 | mRNA | 47965216 | 47970546 | 47965216 | ID=MS.gene89974.t1;Parent=MS.gene89974 |
| chr4.2 | exon | 47965216 | 47965542 | 47965216 | ID=MS.gene89974.t1.exon1;Parent=MS.gene89974.t1 |
| chr4.2 | CDS | 47965216 | 47965542 | 47965216 | ID=cds.MS.gene89974.t1;Parent=MS.gene89974.t1 |
| chr4.2 | exon | 47965669 | 47965767 | 47965669 | ID=MS.gene89974.t1.exon2;Parent=MS.gene89974.t1 |
| chr4.2 | CDS | 47965669 | 47965767 | 47965669 | ID=cds.MS.gene89974.t1;Parent=MS.gene89974.t1 |
| chr4.2 | exon | 47966291 | 47966543 | 47966291 | ID=MS.gene89974.t1.exon3;Parent=MS.gene89974.t1 |
| chr4.2 | CDS | 47966291 | 47966543 | 47966291 | ID=cds.MS.gene89974.t1;Parent=MS.gene89974.t1 |
| chr4.2 | exon | 47968456 | 47968566 | 47968456 | ID=MS.gene89974.t1.exon4;Parent=MS.gene89974.t1 |
| chr4.2 | CDS | 47968456 | 47968566 | 47968456 | ID=cds.MS.gene89974.t1;Parent=MS.gene89974.t1 |
| chr4.2 | exon | 47968792 | 47968928 | 47968792 | ID=MS.gene89974.t1.exon5;Parent=MS.gene89974.t1 |
| chr4.2 | CDS | 47968792 | 47968928 | 47968792 | ID=cds.MS.gene89974.t1;Parent=MS.gene89974.t1 |
| chr4.2 | exon | 47969168 | 47969281 | 47969168 | ID=MS.gene89974.t1.exon6;Parent=MS.gene89974.t1 |
| chr4.2 | CDS | 47969168 | 47969281 | 47969168 | ID=cds.MS.gene89974.t1;Parent=MS.gene89974.t1 |
| chr4.2 | exon | 47969377 | 47969576 | 47969377 | ID=MS.gene89974.t1.exon7;Parent=MS.gene89974.t1 |
| chr4.2 | CDS | 47969377 | 47969576 | 47969377 | ID=cds.MS.gene89974.t1;Parent=MS.gene89974.t1 |
| chr4.2 | exon | 47969692 | 47969925 | 47969692 | ID=MS.gene89974.t1.exon8;Parent=MS.gene89974.t1 |
| chr4.2 | CDS | 47969692 | 47969925 | 47969692 | ID=cds.MS.gene89974.t1;Parent=MS.gene89974.t1 |
| chr4.2 | exon | 47970393 | 47970546 | 47970393 | ID=MS.gene89974.t1.exon9;Parent=MS.gene89974.t1 |
| chr4.2 | CDS | 47970393 | 47970546 | 47970393 | ID=cds.MS.gene89974.t1;Parent=MS.gene89974.t1 |
| Gene Sequence |
| Protein sequence |
