Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90199.t1 | RHN62690.1 | 97 | 508 | 9 | 1 | 1 | 508 | 34 | 535 | 1.10E-277 | 965.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90199.t1 | P47924 | 81.4 | 462 | 82 | 2 | 31 | 488 | 68 | 529 | 8.5e-218 | 757.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90199.t1 | A0A396IAS6 | 97.0 | 508 | 9 | 1 | 1 | 508 | 34 | 535 | 8.0e-278 | 965.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene90199 | 0.824875 | 6.37E-54 | -1.69E-46 |
| MS.gene04917 | MS.gene90199 | 0.821609 | 3.69E-53 | -1.69E-46 |
| MS.gene049378 | MS.gene90199 | 0.800797 | 1.22E-48 | -1.69E-46 |
| MS.gene049758 | MS.gene90199 | 0.842001 | 3.38E-58 | -1.69E-46 |
| MS.gene04984 | MS.gene90199 | 0.802123 | 6.51E-49 | -1.69E-46 |
| MS.gene050128 | MS.gene90199 | 0.815773 | 7.79E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene90199 | 0.817933 | 2.55E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene90199 | -0.825254 | 5.18E-54 | -1.69E-46 |
| MS.gene050762 | MS.gene90199 | 0.823629 | 1.25E-53 | -1.69E-46 |
| MS.gene050763 | MS.gene90199 | 0.823457 | 1.37E-53 | -1.69E-46 |
| MS.gene050987 | MS.gene90199 | 0.800818 | 1.21E-48 | -1.69E-46 |
| MS.gene051535 | MS.gene90199 | 0.835369 | 1.75E-56 | -1.69E-46 |
| MS.gene051662 | MS.gene90199 | 0.825356 | 4.90E-54 | -1.69E-46 |
| MS.gene051663 | MS.gene90199 | 0.842562 | 2.40E-58 | -1.69E-46 |
| MS.gene052970 | MS.gene90199 | -0.803677 | 3.11E-49 | -1.69E-46 |
| MS.gene05316 | MS.gene90199 | 0.802557 | 5.30E-49 | -1.69E-46 |
| MS.gene053559 | MS.gene90199 | 0.951443 | 2.02E-109 | -1.69E-46 |
| MS.gene053577 | MS.gene90199 | 0.849433 | 3.24E-60 | -1.69E-46 |
| MS.gene053836 | MS.gene90199 | 0.836105 | 1.14E-56 | -1.69E-46 |
| MS.gene054379 | MS.gene90199 | 0.830778 | 2.42E-55 | -1.69E-46 |
| MS.gene054930 | MS.gene90199 | 0.868344 | 7.00E-66 | -1.69E-46 |
| MS.gene055422 | MS.gene90199 | 0.809842 | 1.55E-50 | -1.69E-46 |
| MS.gene055441 | MS.gene90199 | 0.803518 | 3.35E-49 | -1.69E-46 |
| MS.gene05647 | MS.gene90199 | 0.801192 | 1.01E-48 | -1.69E-46 |
| MS.gene057450 | MS.gene90199 | 0.800408 | 1.46E-48 | -1.69E-46 |
| MS.gene057754 | MS.gene90199 | 0.802265 | 6.09E-49 | -1.69E-46 |
| MS.gene058433 | MS.gene90199 | 0.810148 | 1.33E-50 | -1.69E-46 |
| MS.gene058435 | MS.gene90199 | 0.811146 | 8.10E-51 | -1.69E-46 |
| MS.gene058661 | MS.gene90199 | -0.807942 | 3.95E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene90199 | 0.805249 | 1.46E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene90199 | 0.800426 | 1.45E-48 | -1.69E-46 |
| MS.gene059899 | MS.gene90199 | 0.860967 | 1.43E-63 | -1.69E-46 |
| MS.gene060084 | MS.gene90199 | 0.832835 | 7.54E-56 | -1.69E-46 |
| MS.gene060495 | MS.gene90199 | 0.848301 | 6.69E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30932 | MS.gene90199 | PPI |
| MS.gene90199 | MS.gene31184 | PPI |
| MS.gene028619 | MS.gene90199 | PPI |
| MS.gene90199 | MS.gene028610 | PPI |
| MS.gene45469 | MS.gene90199 | PPI |
| MS.gene071560 | MS.gene90199 | PPI |
| MS.gene90199 | MS.gene31178 | PPI |
| MS.gene30927 | MS.gene90199 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90199.t1 | MTR_4g094130 | 96.850 | 508 | 10 | 1 | 1 | 508 | 34 | 535 | 0.0 | 998 |
| MS.gene90199.t1 | MTR_4g094130 | 98.526 | 407 | 6 | 0 | 102 | 508 | 1 | 407 | 0.0 | 824 |
| MS.gene90199.t1 | MTR_2g009270 | 76.608 | 513 | 107 | 3 | 7 | 507 | 29 | 540 | 0.0 | 806 |
| MS.gene90199.t1 | MTR_2g096330 | 62.144 | 457 | 151 | 4 | 37 | 485 | 62 | 504 | 0.0 | 578 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90199.t1 | AT5G64300 | 77.355 | 499 | 95 | 4 | 9 | 489 | 32 | 530 | 0.0 | 786 |
| MS.gene90199.t1 | AT2G22450 | 71.667 | 420 | 109 | 4 | 45 | 463 | 64 | 474 | 0.0 | 612 |
| MS.gene90199.t1 | AT5G59750 | 59.362 | 470 | 186 | 2 | 20 | 484 | 30 | 499 | 0.0 | 577 |
| MS.gene90199.t1 | AT5G59750 | 55.357 | 504 | 186 | 3 | 20 | 484 | 30 | 533 | 0.0 | 560 |
| MS.gene90199.t1 | AT5G59750 | 57.767 | 412 | 169 | 2 | 20 | 426 | 30 | 441 | 3.82e-168 | 483 |
Find 143 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAACCAAACGTGTGAAAA+TGG | 0.179642 | 4.2:+19669210 | MS.gene90199:CDS |
| ACCTGTGGTGGTACCATATT+TGG | 0.201373 | 4.2:-19666021 | None:intergenic |
| TATCTATTGCTGACTTAATA+AGG | 0.228563 | 4.2:+19666318 | MS.gene90199:CDS |
| GGTTATGGTTTGTCCATTTC+AGG | 0.231937 | 4.2:+19669139 | MS.gene90199:CDS |
| GTTGATCTTGCAGTACTTGC+TGG | 0.298152 | 4.2:+19666191 | MS.gene90199:CDS |
| TGTCTCACAGGAGACATATT+TGG | 0.327946 | 4.2:+19668625 | MS.gene90199:CDS |
| GAGATTAGAGCTTCCTTTGA+TGG | 0.335212 | 4.2:+19665541 | MS.gene90199:CDS |
| CATTCACAGCTAACTGTTAT+AGG | 0.336467 | 4.2:+19667327 | MS.gene90199:CDS |
| GGATAGGGCAACCACAGTTT+TGG | 0.339372 | 4.2:+19666055 | MS.gene90199:CDS |
| CAATGGGATCCTACCTGAAA+TGG | 0.346472 | 4.2:-19669152 | None:intergenic |
| ACTGGAATCATCAATATTAC+TGG | 0.361001 | 4.2:-19669278 | None:intergenic |
| TCTTGCAGTACTTGCTGGTT+TGG | 0.375590 | 4.2:+19666196 | MS.gene90199:CDS |
| TATGTTGGGCTCAAAGGTTA+TGG | 0.393304 | 4.2:+19669124 | MS.gene90199:CDS |
| CCTGTTGACTCAAGGGAGTA+TGG | 0.400777 | 4.2:+19668838 | MS.gene90199:CDS |
| GGACATGAAGGAAGGGGTAT+TGG | 0.405006 | 4.2:+19668736 | MS.gene90199:CDS |
| TTATTTAACAGGGTGACATT+GGG | 0.414280 | 4.2:+19668566 | MS.gene90199:intron |
| ATTGGTCTGGCAGGTATAGA+AGG | 0.425872 | 4.2:+19667246 | MS.gene90199:intron |
| GCTCAGATTTGGCATTTGTT+CGG | 0.426151 | 4.2:+19665012 | MS.gene90199:CDS |
| TCCTTTGATGGTCAACAGTC+GGG | 0.426635 | 4.2:+19665553 | MS.gene90199:CDS |
| GTTAAAGCTGCGTTGACCTC+TGG | 0.428144 | 4.2:+19665077 | MS.gene90199:CDS |
| TTTATTGTGAAGCACGGAAC+TGG | 0.428836 | 4.2:+19665482 | MS.gene90199:CDS |
| GAAGGAAGGGGTATTGGATT+GGG | 0.436773 | 4.2:+19668742 | MS.gene90199:CDS |
| CCTGGGCGGTTGAAATCACT+TGG | 0.436809 | 4.2:-19666101 | None:intergenic |
| CTTATTTAACAGGGTGACAT+TGG | 0.437054 | 4.2:+19668565 | MS.gene90199:intron |
| TTATGTGCCAGGAGCAGTAC+TGG | 0.441984 | 4.2:-19669296 | None:intergenic |
| TTATGTGCGTGGCTCAGATT+TGG | 0.442254 | 4.2:+19665001 | MS.gene90199:CDS |
| TCTAATAATGGCAGCACAGT+TGG | 0.442929 | 4.2:+19665439 | MS.gene90199:CDS |
| TGAAGGAAGGGGTATTGGAT+TGG | 0.444630 | 4.2:+19668741 | MS.gene90199:CDS |
| TGCGGTAGCGCTTGGAACAC+TGG | 0.448752 | 4.2:+19665154 | MS.gene90199:CDS |
| CAGGTGTGTCGGCTCAGGAT+AGG | 0.455862 | 4.2:+19666039 | MS.gene90199:CDS |
| CCATACTCCCTTGAGTCAAC+AGG | 0.462092 | 4.2:-19668838 | None:intergenic |
| CACTTATCACAAATGAAAAC+AGG | 0.465466 | 4.2:+19669179 | MS.gene90199:CDS |
| GAATTTAACAGCAAATTGAA+TGG | 0.466315 | 4.2:+19669250 | MS.gene90199:CDS |
| CAACTTAATGCGGTAGCGCT+TGG | 0.467840 | 4.2:+19665146 | MS.gene90199:CDS |
| GGAGCAGATACAGCTCTAAC+AGG | 0.470368 | 4.2:+19665176 | MS.gene90199:CDS |
| AGGCAATCCCAACTCCTCAT+TGG | 0.470707 | 4.2:-19668818 | None:intergenic |
| GCAAAATATGTTGGGCTCAA+AGG | 0.471659 | 4.2:+19669118 | MS.gene90199:CDS |
| AAACGAAGGAGATCTAATAA+TGG | 0.473118 | 4.2:+19665427 | MS.gene90199:CDS |
| AACAATCCGGCAAAATATGT+TGG | 0.476857 | 4.2:+19669109 | MS.gene90199:CDS |
| AATTGTAATTGCAGATATTG+AGG | 0.477500 | 4.2:+19669053 | MS.gene90199:intron |
| TCTGCAAACTGGCGAAGCTT+AGG | 0.478958 | 4.2:-19666275 | None:intergenic |
| AGGTGTGTCGGCTCAGGATA+GGG | 0.482470 | 4.2:+19666040 | MS.gene90199:CDS |
| CTGAGGCTATTGAAGACATT+CGG | 0.487102 | 4.2:+19665267 | MS.gene90199:CDS |
| GTGTGACTGCGGAAATCAAT+TGG | 0.489196 | 4.2:+19668657 | MS.gene90199:CDS |
| AAATGAAAACAGGAGATACT+TGG | 0.489544 | 4.2:+19669189 | MS.gene90199:CDS |
| GAAACCAAACGTGTGAAAAT+GGG | 0.490915 | 4.2:+19669211 | MS.gene90199:CDS |
| CAGATTGAGGCTGCTGGCAG+AGG | 0.491152 | 4.2:+19668694 | MS.gene90199:CDS |
| TGTAGAAGCCAATGAGGAGT+TGG | 0.491158 | 4.2:+19668810 | MS.gene90199:CDS |
| TGCTTATAACCTACAGGATG+AGG | 0.491407 | 4.2:+19668777 | MS.gene90199:CDS |
| AAGGAAGCTCTAATCTCTCC+AGG | 0.494013 | 4.2:-19665535 | None:intergenic |
| TTGTGATAAGTGATAACAAT+GGG | 0.494880 | 4.2:-19669168 | None:intergenic |
| CACCACAGGTGTGTCGGCTC+AGG | 0.495943 | 4.2:+19666034 | MS.gene90199:CDS |
| GTTGGCAACACCTGAGGCTA+TGG | 0.497594 | 4.2:+19665457 | MS.gene90199:CDS |
| GTGAAAATGGGTCACATGTA+TGG | 0.498935 | 4.2:+19669223 | MS.gene90199:CDS |
| GCCAAATATGGTACCACCAC+AGG | 0.505213 | 4.2:+19666020 | MS.gene90199:CDS |
| ACAATCCGGCAAAATATGTT+GGG | 0.506282 | 4.2:+19669110 | MS.gene90199:CDS |
| GACTCAAGGGAGTATGGAAT+TGG | 0.510546 | 4.2:+19668844 | MS.gene90199:CDS |
| ATTGTAATTGCAGATATTGA+GGG | 0.510691 | 4.2:+19669054 | MS.gene90199:intron |
| TGGGATTGCCTGTTGACTCA+AGG | 0.511648 | 4.2:+19668830 | MS.gene90199:CDS |
| GATTCAGACAGTCCAACAAA+AGG | 0.513016 | 4.2:+19665230 | MS.gene90199:CDS |
| TTTAGCGGGAAAATATGGCC+TGG | 0.513539 | 4.2:-19666119 | None:intergenic |
| TTAGCGGGAAAATATGGCCT+GGG | 0.516577 | 4.2:-19666118 | None:intergenic |
| TTCCTTTGATGGTCAACAGT+CGG | 0.517538 | 4.2:+19665552 | MS.gene90199:CDS |
| GGTGGTATCTTGAAGAGAGC+TGG | 0.518284 | 4.2:+19666152 | MS.gene90199:CDS |
| ATTGCAGATATTGAGGGACT+TGG | 0.519933 | 4.2:+19669060 | MS.gene90199:intron |
| GTCTTCAATAGCCTCAGGTA+TGG | 0.520814 | 4.2:-19665261 | None:intergenic |
| GGGATTGCCTGTTGACTCAA+GGG | 0.524496 | 4.2:+19668831 | MS.gene90199:CDS |
| CTATAACAGTTAGCTGTGAA+TGG | 0.526297 | 4.2:-19667326 | None:intergenic |
| TCTTGCAATGCAACAGATTG+AGG | 0.526543 | 4.2:+19668681 | MS.gene90199:CDS |
| GTAGAAGCCAATGAGGAGTT+GGG | 0.529410 | 4.2:+19668811 | MS.gene90199:CDS |
| TCCCGACTGTTGACCATCAA+AGG | 0.529835 | 4.2:-19665554 | None:intergenic |
| TTGATTTCCGCAGTCACACC+TGG | 0.532360 | 4.2:-19668653 | None:intergenic |
| GCGGTAGCGCTTGGAACACT+GGG | 0.540082 | 4.2:+19665155 | MS.gene90199:CDS |
| GGCTGCTGGCAGAGGTGTGT+TGG | 0.543552 | 4.2:+19668702 | MS.gene90199:CDS |
| GGAGCATATTGCGATGGTAA+AGG | 0.544393 | 4.2:+19667367 | MS.gene90199:CDS |
| AAGCATGAAAGAGGAAGACC+TGG | 0.546167 | 4.2:+19665517 | MS.gene90199:CDS |
| CGAATGTCTTCAATAGCCTC+AGG | 0.546934 | 4.2:-19665266 | None:intergenic |
| GAAGCTAATGACAAACAATC+CGG | 0.547961 | 4.2:+19669096 | MS.gene90199:CDS |
| GCTTCGTGCTTATAACCTAC+AGG | 0.549079 | 4.2:+19668771 | MS.gene90199:CDS |
| TGCACTAATACCAACAATGT+GGG | 0.551549 | 4.2:+19667301 | MS.gene90199:CDS |
| GATGATTCCAGTACTGCTCC+TGG | 0.554163 | 4.2:+19669289 | MS.gene90199:CDS |
| ATGGTTTGTCCATTTCAGGT+AGG | 0.561182 | 4.2:+19669143 | MS.gene90199:CDS |
| ACAATAAAAGCCATAGCCTC+AGG | 0.561239 | 4.2:-19665467 | None:intergenic |
| TCTTCGAGGACATGAAGGAA+GGG | 0.561452 | 4.2:+19668729 | MS.gene90199:CDS |
| ATGGATGTGATGTTCTTGTG+AGG | 0.562152 | 4.2:+19668590 | MS.gene90199:CDS |
| ATTAGTACTTCAGATGGTAG+TGG | 0.563625 | 4.2:+19665382 | MS.gene90199:intron |
| ATGCAACAGATTGAGGCTGC+TGG | 0.565430 | 4.2:+19668688 | MS.gene90199:CDS |
| GAGACATATTTGGATCTGCC+AGG | 0.566429 | 4.2:+19668635 | MS.gene90199:CDS |
| CCAAGTGATTTCAACCGCCC+AGG | 0.570750 | 4.2:+19666101 | MS.gene90199:CDS |
| GGAGTATGGAATTGGTGCAC+AGG | 0.571226 | 4.2:+19668852 | MS.gene90199:CDS |
| TAACAGGGTGACATTGGGGA+TGG | 0.572072 | 4.2:+19668571 | MS.gene90199:intron |
| TTGCAGATATTGAGGGACTT+GGG | 0.572398 | 4.2:+19669061 | MS.gene90199:intron |
| GCACTAATACCAACAATGTG+GGG | 0.575469 | 4.2:+19667302 | MS.gene90199:CDS |
| AGTTTGTATAAGCATGAAAG+AGG | 0.575891 | 4.2:+19665508 | MS.gene90199:CDS |
| GGTTATAAGCACGAAGCTTG+TGG | 0.577439 | 4.2:-19668765 | None:intergenic |
| ATCTTCGAGGACATGAAGGA+AGG | 0.578424 | 4.2:+19668728 | MS.gene90199:CDS |
| GCTGCGTTGACCTCTGGAGG+AGG | 0.578530 | 4.2:+19665083 | MS.gene90199:CDS |
| CATACCGCATTGCGACATGA+AGG | 0.581456 | 4.2:-19665050 | None:intergenic |
| ACCTCACACAGAACTGCCAC+AGG | 0.581651 | 4.2:-19666221 | None:intergenic |
| TACAGCATTCACTGTGACAG+TGG | 0.582981 | 4.2:+19665595 | MS.gene90199:CDS |
| AATGGGTCACATGTATGGCT+TGG | 0.585495 | 4.2:+19669228 | MS.gene90199:CDS |
| TGTGAGGTTGTAGATGATGA+TGG | 0.585772 | 4.2:+19666236 | MS.gene90199:CDS |
| CTTCGAGGACATGAAGGAAG+GGG | 0.588755 | 4.2:+19668730 | MS.gene90199:CDS |
| AAAGCTGCGTTGACCTCTGG+AGG | 0.591046 | 4.2:+19665080 | MS.gene90199:CDS |
| CTGTCACAGTGAATGCTGTA+CGG | 0.591136 | 4.2:-19665592 | None:intergenic |
| ACTTGCTGGTTTGGATCCTG+TGG | 0.591421 | 4.2:+19666205 | MS.gene90199:CDS |
| TAACCTACAGGATGAGGGAA+GGG | 0.594297 | 4.2:+19668783 | MS.gene90199:CDS |
| GATACAGCTCTAACAGGCAG+TGG | 0.594402 | 4.2:+19665182 | MS.gene90199:CDS |
| GGTGTGTTGGTATATCTTCG+AGG | 0.595300 | 4.2:+19668715 | MS.gene90199:CDS |
| GATAAACTAGTGGAACGTGC+TGG | 0.595479 | 4.2:+19667275 | MS.gene90199:CDS |
| AAGGAAGAGAGATAAACTAG+TGG | 0.595527 | 4.2:+19667265 | MS.gene90199:CDS |
| GCTATTGAAGACATTCGGAA+TGG | 0.596453 | 4.2:+19665272 | MS.gene90199:CDS |
| TGAAGACATTCGGAATGGAA+AGG | 0.600427 | 4.2:+19665277 | MS.gene90199:CDS |
| GCTTATAACCTACAGGATGA+GGG | 0.601860 | 4.2:+19668778 | MS.gene90199:CDS |
| TATTTAACAGGGTGACATTG+GGG | 0.607649 | 4.2:+19668567 | MS.gene90199:intron |
| TATCCCTTCCCTCATCCTGT+AGG | 0.610379 | 4.2:-19668786 | None:intergenic |
| GTACACTCAGAGTGTCTCAC+AGG | 0.612117 | 4.2:+19668613 | MS.gene90199:CDS |
| ATCCTGAGCCGACACACCTG+TGG | 0.612282 | 4.2:-19666036 | None:intergenic |
| GTATATCTTCGAGGACATGA+AGG | 0.613709 | 4.2:+19668724 | MS.gene90199:CDS |
| ATACCGCATTGCGACATGAA+GGG | 0.616657 | 4.2:-19665049 | None:intergenic |
| TCCTGTGGCAGTTCTGTGTG+AGG | 0.618636 | 4.2:+19666220 | MS.gene90199:CDS |
| CTGCACTAATACCAACAATG+TGG | 0.619531 | 4.2:+19667300 | MS.gene90199:CDS |
| AAGCTTAGGTAATCTAGCCA+TGG | 0.622161 | 4.2:-19666261 | None:intergenic |
| ATAACCTACAGGATGAGGGA+AGG | 0.623311 | 4.2:+19668782 | MS.gene90199:CDS |
| TGGATGTGATGTTCTTGTGA+GGG | 0.626484 | 4.2:+19668591 | MS.gene90199:CDS |
| TTCCCGCTAAAATACAGGGA+AGG | 0.631313 | 4.2:+19666131 | MS.gene90199:CDS |
| TGGTACCACCACAGGTGTGT+CGG | 0.632234 | 4.2:+19666028 | MS.gene90199:CDS |
| TGTAGATGATGATGGTTCCA+TGG | 0.633135 | 4.2:+19666244 | MS.gene90199:CDS |
| CCGCTAAAATACAGGGAAGG+TGG | 0.634097 | 4.2:+19666134 | MS.gene90199:CDS |
| CCGTCTATGATTTATGTGCG+TGG | 0.634493 | 4.2:+19664990 | None:intergenic |
| CTGAGCCGACACACCTGTGG+TGG | 0.636032 | 4.2:-19666033 | None:intergenic |
| AGCACAGTTGGCAACACCTG+AGG | 0.640668 | 4.2:+19665451 | MS.gene90199:CDS |
| CACTAATACCAACAATGTGG+GGG | 0.642333 | 4.2:+19667303 | MS.gene90199:CDS |
| TGGGATGGAGCATATTGCGA+TGG | 0.648423 | 4.2:+19667361 | MS.gene90199:CDS |
| GACGAGGACAGAGAAAACGA+AGG | 0.678938 | 4.2:+19665413 | MS.gene90199:CDS |
| GGATACTGTAGAAGCCAATG+AGG | 0.679133 | 4.2:+19668804 | MS.gene90199:CDS |
| TGAATCAGCACAACTTAATG+CGG | 0.679998 | 4.2:+19665136 | MS.gene90199:CDS |
| GCGGGAAAATATGGCCTGGG+CGG | 0.682425 | 4.2:-19666115 | None:intergenic |
| GGTAGTGGTTGTAGATGACG+AGG | 0.685375 | 4.2:+19665397 | MS.gene90199:CDS |
| TTTGTGATAAGTGATAACAA+TGG | 0.686821 | 4.2:-19669169 | None:intergenic |
| GGATGCAAGGGCCAAAACTG+TGG | 0.696804 | 4.2:-19666066 | None:intergenic |
| GGATCTGCCAGGTGTGACTG+CGG | 0.722494 | 4.2:+19668646 | MS.gene90199:CDS |
| ATTCCCTTCATGTCGCAATG+CGG | 0.734754 | 4.2:+19665046 | MS.gene90199:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATATATGATTAAAAAAAA+AGG | - | chr4.2:19667593-19667612 | None:intergenic | 10.0% |
| !! | TTTAATAAAATATAACTTTG+TGG | + | chr4.2:19665943-19665962 | MS.gene90199:intron | 10.0% |
| !! | AAAAAAAACTAAAGAAAGTA+TGG | - | chr4.2:19667698-19667717 | None:intergenic | 15.0% |
| !! | TCTATATTGAACTATATATA+TGG | + | chr4.2:19667404-19667423 | MS.gene90199:intron | 15.0% |
| !!! | ATTCATTTTGAAAAAATTCA+GGG | - | chr4.2:19668116-19668135 | None:intergenic | 15.0% |
| !!! | TAACTTTGATTTTAACTAAA+TGG | + | chr4.2:19667458-19667477 | MS.gene90199:intron | 15.0% |
| !!! | TATTCATTTTGAAAAAATTC+AGG | - | chr4.2:19668117-19668136 | None:intergenic | 15.0% |
| !!! | TCTCTTTATTTGTATATAAA+GGG | + | chr4.2:19666506-19666525 | MS.gene90199:intron | 15.0% |
| !!! | TTCTCTTTATTTGTATATAA+AGG | + | chr4.2:19666505-19666524 | MS.gene90199:intron | 15.0% |
| !! | AAAATGAATAGAGAAGAAAA+AGG | + | chr4.2:19668127-19668146 | MS.gene90199:intron | 20.0% |
| !! | AAATAATAAAAAGCTCATGA+GGG | + | chr4.2:19666467-19666486 | MS.gene90199:intron | 20.0% |
| !! | AACTAGAAATTCAATCAATT+TGG | + | chr4.2:19666881-19666900 | MS.gene90199:intron | 20.0% |
| !! | AATGCAAAAATGTTGAAAAA+AGG | - | chr4.2:19668412-19668431 | None:intergenic | 20.0% |
| !! | ATATAAAGACAAAATAACCA+CGG | - | chr4.2:19667125-19667144 | None:intergenic | 20.0% |
| !! | ATGCAAAAATGTTGAAAAAA+GGG | - | chr4.2:19668411-19668430 | None:intergenic | 20.0% |
| !! | TAAATAATAAAAAGCTCATG+AGG | + | chr4.2:19666466-19666485 | MS.gene90199:intron | 20.0% |
| !!! | AATTTTTGAAAGACAAATCA+CGG | - | chr4.2:19666851-19666870 | None:intergenic | 20.0% |
| !!! | ATTTTACTGTATTCAATTCA+TGG | + | chr4.2:19668929-19668948 | MS.gene90199:intron | 20.0% |
| !!! | GGTATTCTATATAAAAGTTT+TGG | + | chr4.2:19665321-19665340 | MS.gene90199:intron | 20.0% |
| !!! | TAGGATTTCAATTTTTGTAA+TGG | - | chr4.2:19667025-19667044 | None:intergenic | 20.0% |
| ! | AAAAATTTAACTGCGCTTAA+AGG | - | chr4.2:19667102-19667121 | None:intergenic | 25.0% |
| ! | AAAAGAAACAAAAAGAATCC+AGG | - | chr4.2:19667197-19667216 | None:intergenic | 25.0% |
| ! | AAATTAGCTAAAGATGAATC+AGG | - | chr4.2:19667169-19667188 | None:intergenic | 25.0% |
| ! | AATTGTAATTGCAGATATTG+AGG | + | chr4.2:19669053-19669072 | MS.gene90199:intron | 25.0% |
| ! | ACAACAAAAATTGCATACAA+TGG | - | chr4.2:19666762-19666781 | None:intergenic | 25.0% |
| ! | AGATGACAATTAAGGAAAAT+AGG | - | chr4.2:19666681-19666700 | None:intergenic | 25.0% |
| ! | ATTGAAAGGTTCAAGATAAT+TGG | - | chr4.2:19668483-19668502 | None:intergenic | 25.0% |
| ! | ATTGTAATTGCAGATATTGA+GGG | + | chr4.2:19669054-19669073 | MS.gene90199:intron | 25.0% |
| ! | GAAGAAATAGATGACAATTA+AGG | - | chr4.2:19666689-19666708 | None:intergenic | 25.0% |
| ! | GAATTTAACAGCAAATTGAA+TGG | + | chr4.2:19669250-19669269 | MS.gene90199:CDS | 25.0% |
| ! | GATGACAATTAAGGAAAATA+GGG | - | chr4.2:19666680-19666699 | None:intergenic | 25.0% |
| ! | GTACTAATGTCAGTTAATAA+CGG | - | chr4.2:19665370-19665389 | None:intergenic | 25.0% |
| ! | TAATGGAAGATAAACAAGAT+AGG | - | chr4.2:19667044-19667063 | None:intergenic | 25.0% |
| ! | TACATGATTATTAAGTTCAC+TGG | + | chr4.2:19668957-19668976 | MS.gene90199:intron | 25.0% |
| ! | TATTAGCAAGTTTCTCATTA+GGG | + | chr4.2:19666442-19666461 | MS.gene90199:intron | 25.0% |
| ! | TCATCAAACAAGTTATGTAT+TGG | - | chr4.2:19667812-19667831 | None:intergenic | 25.0% |
| ! | TGCAAAAATGTTGAAAAAAG+GGG | - | chr4.2:19668410-19668429 | None:intergenic | 25.0% |
| ! | TTATTAGCAAGTTTCTCATT+AGG | + | chr4.2:19666441-19666460 | MS.gene90199:intron | 25.0% |
| ! | TTGTGATAAGTGATAACAAT+GGG | - | chr4.2:19669171-19669190 | None:intergenic | 25.0% |
| ! | TTTGTGATAAGTGATAACAA+TGG | - | chr4.2:19669172-19669191 | None:intergenic | 25.0% |
| !! | AACATAGAACTAGATGTTTT+AGG | + | chr4.2:19668997-19669016 | MS.gene90199:intron | 25.0% |
| !! | AATTCTCATTGACTGAAATT+GGG | + | chr4.2:19668305-19668324 | MS.gene90199:intron | 25.0% |
| !! | ACTTATCAATGCAATTTTGT+AGG | + | chr4.2:19665995-19666014 | MS.gene90199:intron | 25.0% |
| !! | GTAAGTAGTTCGATATTTTA+AGG | - | chr4.2:19667906-19667925 | None:intergenic | 25.0% |
| !! | TGGACATTTCTTATTTAACA+GGG | + | chr4.2:19668556-19668575 | MS.gene90199:intron | 25.0% |
| !! | TTGGACATTTCTTATTTAAC+AGG | + | chr4.2:19668555-19668574 | MS.gene90199:intron | 25.0% |
| !! | TTTCAACATTTTTGCATTCA+AGG | + | chr4.2:19668414-19668433 | MS.gene90199:intron | 25.0% |
| !!! | AGGGTTTTTAAGTAATTAGT+AGG | + | chr4.2:19666396-19666415 | MS.gene90199:intron | 25.0% |
| !!! | CAATCAATTTGGTTTTTTTG+TGG | + | chr4.2:19666892-19666911 | MS.gene90199:intron | 25.0% |
| !!! | GATTCTTTTTGTTTCTTTTC+TGG | + | chr4.2:19667198-19667217 | MS.gene90199:intron | 25.0% |
| !!! | GTTTTTAAGTAATTAGTAGG+TGG | + | chr4.2:19666399-19666418 | MS.gene90199:intron | 25.0% |
| !!! | TATCTATTGCTGACTTAATA+AGG | + | chr4.2:19666318-19666337 | MS.gene90199:CDS | 25.0% |
| !!! | TGTTTTAGATGATGTAAGAA+TGG | - | chr4.2:19665689-19665708 | None:intergenic | 25.0% |
| !!! | TTATTTATTTTTGACAGCCA+CGG | - | chr4.2:19667638-19667657 | None:intergenic | 25.0% |
| !!! | TTGTATGCAATTTTTGTTGT+CGG | + | chr4.2:19666762-19666781 | MS.gene90199:intron | 25.0% |
| AAACGAAGGAGATCTAATAA+TGG | + | chr4.2:19665427-19665446 | MS.gene90199:CDS | 30.0% | |
| AAACTGATCTTGTCAGTTAA+AGG | - | chr4.2:19668350-19668369 | None:intergenic | 30.0% | |
| AAATGAAAACAGGAGATACT+TGG | + | chr4.2:19669189-19669208 | MS.gene90199:CDS | 30.0% | |
| ACTGGAATCATCAATATTAC+TGG | - | chr4.2:19669281-19669300 | None:intergenic | 30.0% | |
| ACTTAAAAACCCTCTCATAT+TGG | - | chr4.2:19666389-19666408 | None:intergenic | 30.0% | |
| AGACCTAAAAAATGAAGATC+TGG | + | chr4.2:19665106-19665125 | MS.gene90199:CDS | 30.0% | |
| AGGTAAGGAACAAAAAATAG+AGG | - | chr4.2:19667149-19667168 | None:intergenic | 30.0% | |
| AGTAAATGTCTGTTACATAC+TGG | - | chr4.2:19665845-19665864 | None:intergenic | 30.0% | |
| AGTAATGACAATAGTAGTAG+AGG | - | chr4.2:19666645-19666664 | None:intergenic | 30.0% | |
| AGTTTGTATAAGCATGAAAG+AGG | + | chr4.2:19665508-19665527 | MS.gene90199:CDS | 30.0% | |
| ATAAAAATTGAGTCACATCG+AGG | + | chr4.2:19667662-19667681 | MS.gene90199:intron | 30.0% | |
| ATCATATTGCTCTACCATAT+TGG | - | chr4.2:19667506-19667525 | None:intergenic | 30.0% | |
| CACTTATCACAAATGAAAAC+AGG | + | chr4.2:19669179-19669198 | MS.gene90199:CDS | 30.0% | |
| CTAAAAAATGAAGATCTGGT+TGG | + | chr4.2:19665110-19665129 | MS.gene90199:CDS | 30.0% | |
| CTTAAAAACCCTCTCATATT+GGG | - | chr4.2:19666388-19666407 | None:intergenic | 30.0% | |
| GATCTAGTCATCTTTCTATT+TGG | + | chr4.2:19668263-19668282 | MS.gene90199:intron | 30.0% | |
| GTAAATGTCTGTTACATACT+GGG | - | chr4.2:19665844-19665863 | None:intergenic | 30.0% | |
| GTAATGACAATAGTAGTAGA+GGG | - | chr4.2:19666644-19666663 | None:intergenic | 30.0% | |
| TAGCTTCTATTCCAAATGTA+GGG | - | chr4.2:19667838-19667857 | None:intergenic | 30.0% | |
| TTAGCTTCTATTCCAAATGT+AGG | - | chr4.2:19667839-19667858 | None:intergenic | 30.0% | |
| TTATTTAACAGGGTGACATT+GGG | + | chr4.2:19668566-19668585 | MS.gene90199:intron | 30.0% | |
| ! | ATATTTTCCCGCTAAAATAC+AGG | + | chr4.2:19666126-19666145 | MS.gene90199:CDS | 30.0% |
| ! | ATTTTGTAGGATGCCAAATA+TGG | + | chr4.2:19666008-19666027 | MS.gene90199:intron | 30.0% |
| ! | CTTTAGCTAATTTTTCTTCC+TGG | + | chr4.2:19667176-19667195 | MS.gene90199:intron | 30.0% |
| ! | GAATTCTCATTGACTGAAAT+TGG | + | chr4.2:19668304-19668323 | MS.gene90199:intron | 30.0% |
| ! | GTTAATAACGGAAATCTAAG+TGG | - | chr4.2:19665358-19665377 | None:intergenic | 30.0% |
| ! | TATTTTCCCGCTAAAATACA+GGG | + | chr4.2:19666127-19666146 | MS.gene90199:CDS | 30.0% |
| ! | TTTTGAATCTTTGGATGCAA+GGG | - | chr4.2:19666081-19666100 | None:intergenic | 30.0% |
| !! | AGAATTTCAAGTTAACTCAC+GGG | - | chr4.2:19667995-19668014 | None:intergenic | 30.0% |
| !! | CAGAATTTCAAGTTAACTCA+CGG | - | chr4.2:19667996-19668015 | None:intergenic | 30.0% |
| !! | TGATAGCAACCTCTAAAATT+AGG | - | chr4.2:19666926-19666945 | None:intergenic | 30.0% |
| !!! | ATCACTTGGTTTTGAATCTT+TGG | - | chr4.2:19666090-19666109 | None:intergenic | 30.0% |
| !!! | CAACCAGATCTTCATTTTTT+AGG | - | chr4.2:19665112-19665131 | None:intergenic | 30.0% |
| !!! | GTTATAGGTCACTTTTAGAT+GGG | + | chr4.2:19667342-19667361 | MS.gene90199:CDS | 30.0% |
| !!! | TGTATTTTAGCGGGAAAATA+TGG | - | chr4.2:19666127-19666146 | None:intergenic | 30.0% |
| !!! | TGTTATAGGTCACTTTTAGA+TGG | + | chr4.2:19667341-19667360 | MS.gene90199:CDS | 30.0% |
| AACAATCCGGCAAAATATGT+TGG | + | chr4.2:19669109-19669128 | MS.gene90199:CDS | 35.0% | |
| AAGACTTCACTCAATCTTGT+GGG | - | chr4.2:19668230-19668249 | None:intergenic | 35.0% | |
| AAGCTAAGCTATTGGCATAA+AGG | + | chr4.2:19667852-19667871 | MS.gene90199:intron | 35.0% | |
| AAGGAAGAGAGATAAACTAG+TGG | + | chr4.2:19667265-19667284 | MS.gene90199:CDS | 35.0% | |
| AATTAGTAGGTGGCTAAGTA+GGG | + | chr4.2:19666409-19666428 | MS.gene90199:intron | 35.0% | |
| ACAATCCGGCAAAATATGTT+GGG | + | chr4.2:19669110-19669129 | MS.gene90199:CDS | 35.0% | |
| ACACAAAGTTTACCTCTTAG+TGG | - | chr4.2:19668189-19668208 | None:intergenic | 35.0% | |
| ACTGACATTAGTACTTCAGA+TGG | + | chr4.2:19665376-19665395 | MS.gene90199:intron | 35.0% | |
| AGCTAAAGATGAATCAGGTA+AGG | - | chr4.2:19667164-19667183 | None:intergenic | 35.0% | |
| AGTCCCAAAAAATCTCAGAT+AGG | + | chr4.2:19667954-19667973 | MS.gene90199:intron | 35.0% | |
| ATTAGTACTTCAGATGGTAG+TGG | + | chr4.2:19665382-19665401 | MS.gene90199:intron | 35.0% | |
| ATTATTATTACACCCTCAGC+AGG | - | chr4.2:19667730-19667749 | None:intergenic | 35.0% | |
| ATTTACTCACCTTCATGTGA+TGG | + | chr4.2:19665711-19665730 | MS.gene90199:intron | 35.0% | |
| CATTCACAGCTAACTGTTAT+AGG | + | chr4.2:19667327-19667346 | MS.gene90199:CDS | 35.0% | |
| CTATAACAGTTAGCTGTGAA+TGG | - | chr4.2:19667329-19667348 | None:intergenic | 35.0% | |
| CTTATGAGTTGTAGGTTTGA+CGG | + | chr4.2:19666534-19666553 | MS.gene90199:intron | 35.0% | |
| CTTATTTAACAGGGTGACAT+TGG | + | chr4.2:19668565-19668584 | MS.gene90199:intron | 35.0% | |
| GAAACCAAACGTGTGAAAAT+GGG | + | chr4.2:19669211-19669230 | MS.gene90199:CDS | 35.0% | |
| GAAATGTCCAACCATAACAA+AGG | - | chr4.2:19668546-19668565 | None:intergenic | 35.0% | |
| GAAGCTAATGACAAACAATC+CGG | + | chr4.2:19669096-19669115 | MS.gene90199:CDS | 35.0% | |
| GAGGTAAACTTTGTGTGTTT+AGG | + | chr4.2:19668193-19668212 | MS.gene90199:intron | 35.0% | |
| GCATAAGAGAGATACCAATA+TGG | + | chr4.2:19667489-19667508 | MS.gene90199:intron | 35.0% | |
| GGGAAATTCTTATGAGTTGT+AGG | + | chr4.2:19666526-19666545 | MS.gene90199:intron | 35.0% | |
| GTAAAAAGAACCTTGATCCA+GGG | + | chr4.2:19668149-19668168 | MS.gene90199:intron | 35.0% | |
| GTCCCAAAAAATCTCAGATA+GGG | + | chr4.2:19667955-19667974 | MS.gene90199:intron | 35.0% | |
| GTTCTGATCCACAAATACTT+TGG | + | chr4.2:19668042-19668061 | MS.gene90199:intron | 35.0% | |
| TAAAGTTGACCATCACATGA+AGG | - | chr4.2:19665723-19665742 | None:intergenic | 35.0% | |
| TAATTAGTAGGTGGCTAAGT+AGG | + | chr4.2:19666408-19666427 | MS.gene90199:intron | 35.0% | |
| TAGGTGTTAATCTCCTTGAT+AGG | - | chr4.2:19667227-19667246 | None:intergenic | 35.0% | |
| TATTTAACAGGGTGACATTG+GGG | + | chr4.2:19668567-19668586 | MS.gene90199:intron | 35.0% | |
| TCAAGGAGATTAACACCTAT+TGG | + | chr4.2:19667228-19667247 | MS.gene90199:intron | 35.0% | |
| TCAATGAGAATTCCATTCCT+GGG | - | chr4.2:19668297-19668316 | None:intergenic | 35.0% | |
| TCATGTGATGGTCAACTTTA+GGG | + | chr4.2:19665723-19665742 | MS.gene90199:intron | 35.0% | |
| TCCCAAAAAATCTCAGATAG+GGG | + | chr4.2:19667956-19667975 | MS.gene90199:intron | 35.0% | |
| TGAATCAGCACAACTTAATG+CGG | + | chr4.2:19665136-19665155 | MS.gene90199:CDS | 35.0% | |
| TGACAGTGGTATGTACAATT+TGG | + | chr4.2:19665609-19665628 | MS.gene90199:intron | 35.0% | |
| TGCACTAATACCAACAATGT+GGG | + | chr4.2:19667301-19667320 | MS.gene90199:CDS | 35.0% | |
| TGCGAAATACGTTGTATGTT+AGG | + | chr4.2:19666361-19666380 | MS.gene90199:intron | 35.0% | |
| TGGAATAGAAGCTAAGCTAT+TGG | + | chr4.2:19667844-19667863 | MS.gene90199:intron | 35.0% | |
| TGTTTAATAACTGCAGTGCA+AGG | - | chr4.2:19667071-19667090 | None:intergenic | 35.0% | |
| TTCATGTGATGGTCAACTTT+AGG | + | chr4.2:19665722-19665741 | MS.gene90199:intron | 35.0% | |
| TTTGATGAAGTCCCTACATT+TGG | + | chr4.2:19667824-19667843 | MS.gene90199:intron | 35.0% | |
| ! | AATAACGGAAATCTAAGTGG+AGG | - | chr4.2:19665355-19665374 | None:intergenic | 35.0% |
| ! | ATGGAAGCAAAACCTTTTGT+TGG | - | chr4.2:19665245-19665264 | None:intergenic | 35.0% |
| ! | ATGGCTTTTATTGTGAAGCA+CGG | + | chr4.2:19665476-19665495 | MS.gene90199:CDS | 35.0% |
| ! | TGACGGAATATGTTTCTGTT+AGG | + | chr4.2:19666551-19666570 | MS.gene90199:intron | 35.0% |
| ! | TGTTGAAGCCAAAGTATTTG+TGG | - | chr4.2:19668053-19668072 | None:intergenic | 35.0% |
| !! | AACTAGATGTTTTAGGCAGT+TGG | + | chr4.2:19669004-19669023 | MS.gene90199:intron | 35.0% |
| !! | GTTTTGAATCTTTGGATGCA+AGG | - | chr4.2:19666082-19666101 | None:intergenic | 35.0% |
| !! | TGTTACTGTTGGTTTATTGC+AGG | + | chr4.2:19666721-19666740 | MS.gene90199:intron | 35.0% |
| !!! | ATTTTAAGGTGCCAATCCTA+GGG | - | chr4.2:19667892-19667911 | None:intergenic | 35.0% |
| !!! | TATTTTAAGGTGCCAATCCT+AGG | - | chr4.2:19667893-19667912 | None:intergenic | 35.0% |
| !!! | TCTTTTCTGGTTACCTATCA+AGG | + | chr4.2:19667211-19667230 | MS.gene90199:intron | 35.0% |
| AAGCTTAGGTAATCTAGCCA+TGG | - | chr4.2:19666264-19666283 | None:intergenic | 40.0% | |
| ACAATAAAAGCCATAGCCTC+AGG | - | chr4.2:19665470-19665489 | None:intergenic | 40.0% | |
| AGAAAGATGACTAGATCCCT+GGG | - | chr4.2:19668260-19668279 | None:intergenic | 40.0% | |
| AGCCTGCAGGATTTGAAAAT+CGG | + | chr4.2:19668448-19668467 | MS.gene90199:intron | 40.0% | |
| ATGACATACTTCCCTAGGAT+TGG | + | chr4.2:19667878-19667897 | MS.gene90199:intron | 40.0% | |
| ATGATATAGAATGCCTGAGC+AGG | + | chr4.2:19668079-19668098 | MS.gene90199:intron | 40.0% | |
| ATGGATGTGATGTTCTTGTG+AGG | + | chr4.2:19668590-19668609 | MS.gene90199:CDS | 40.0% | |
| ATGTTAGGACCCAATATGAG+AGG | + | chr4.2:19666376-19666395 | MS.gene90199:intron | 40.0% | |
| ATTGCAGATATTGAGGGACT+TGG | + | chr4.2:19669060-19669079 | MS.gene90199:intron | 40.0% | |
| CAAGACTTCACTCAATCTTG+TGG | - | chr4.2:19668231-19668250 | None:intergenic | 40.0% | |
| CACAAATAGGATCCACTAAG+AGG | + | chr4.2:19668174-19668193 | MS.gene90199:intron | 40.0% | |
| CACAAGATTGAGTGAAGTCT+TGG | + | chr4.2:19668229-19668248 | MS.gene90199:intron | 40.0% | |
| CACTAATACCAACAATGTGG+GGG | + | chr4.2:19667303-19667322 | MS.gene90199:CDS | 40.0% | |
| CATACAATGGTAGAACCCAA+TGG | - | chr4.2:19666749-19666768 | None:intergenic | 40.0% | |
| CTCTCTGGACTTCAAGAATT+GGG | - | chr4.2:19667770-19667789 | None:intergenic | 40.0% | |
| CTGAGGCTATTGAAGACATT+CGG | + | chr4.2:19665267-19665286 | MS.gene90199:CDS | 40.0% | |
| CTGCACTAATACCAACAATG+TGG | + | chr4.2:19667300-19667319 | MS.gene90199:CDS | 40.0% | |
| GAGATTAACACCTATTGGTC+TGG | + | chr4.2:19667233-19667252 | MS.gene90199:intron | 40.0% | |
| GAGATTAGAGCTTCCTTTGA+TGG | + | chr4.2:19665541-19665560 | MS.gene90199:CDS | 40.0% | |
| GATTCAGACAGTCCAACAAA+AGG | + | chr4.2:19665230-19665249 | MS.gene90199:CDS | 40.0% | |
| GCAAAATATGTTGGGCTCAA+AGG | + | chr4.2:19669118-19669137 | MS.gene90199:CDS | 40.0% | |
| GCACTAATACCAACAATGTG+GGG | + | chr4.2:19667302-19667321 | MS.gene90199:CDS | 40.0% | |
| GCAGTTGGATTCACTCATAA+TGG | + | chr4.2:19669019-19669038 | MS.gene90199:intron | 40.0% | |
| GCTATTGAAGACATTCGGAA+TGG | + | chr4.2:19665272-19665291 | MS.gene90199:CDS | 40.0% | |
| GCTCAGATTTGGCATTTGTT+CGG | + | chr4.2:19665012-19665031 | MS.gene90199:CDS | 40.0% | |
| GCTTATAACCTACAGGATGA+GGG | + | chr4.2:19668778-19668797 | MS.gene90199:CDS | 40.0% | |
| GGAAAATGACATACTTCCCT+AGG | + | chr4.2:19667873-19667892 | MS.gene90199:intron | 40.0% | |
| GGAAACCAAACGTGTGAAAA+TGG | + | chr4.2:19669210-19669229 | MS.gene90199:CDS | 40.0% | |
| GGTAAAAAGAACCTTGATCC+AGG | + | chr4.2:19668148-19668167 | MS.gene90199:intron | 40.0% | |
| GGTTTATTGCAGGATCCATT+GGG | + | chr4.2:19666731-19666750 | MS.gene90199:intron | 40.0% | |
| GTATATCTTCGAGGACATGA+AGG | + | chr4.2:19668724-19668743 | MS.gene90199:CDS | 40.0% | |
| GTCAATGAGAATTCCATTCC+TGG | - | chr4.2:19668298-19668317 | None:intergenic | 40.0% | |
| GTGAAAATGGGTCACATGTA+TGG | + | chr4.2:19669223-19669242 | MS.gene90199:CDS | 40.0% | |
| TAGAAAGATGACTAGATCCC+TGG | - | chr4.2:19668261-19668280 | None:intergenic | 40.0% | |
| TATGTTGGGCTCAAAGGTTA+TGG | + | chr4.2:19669124-19669143 | MS.gene90199:CDS | 40.0% | |
| TCTAATAATGGCAGCACAGT+TGG | + | chr4.2:19665439-19665458 | MS.gene90199:CDS | 40.0% | |
| TCTCTCTGGACTTCAAGAAT+TGG | - | chr4.2:19667771-19667790 | None:intergenic | 40.0% | |
| TCTTGCAATGCAACAGATTG+AGG | + | chr4.2:19668681-19668700 | MS.gene90199:CDS | 40.0% | |
| TGAAGACATTCGGAATGGAA+AGG | + | chr4.2:19665277-19665296 | MS.gene90199:CDS | 40.0% | |
| TGCTTATAACCTACAGGATG+AGG | + | chr4.2:19668777-19668796 | MS.gene90199:CDS | 40.0% | |
| TGGATGTGATGTTCTTGTGA+GGG | + | chr4.2:19668591-19668610 | MS.gene90199:CDS | 40.0% | |
| TGGTTTATTGCAGGATCCAT+TGG | + | chr4.2:19666730-19666749 | MS.gene90199:intron | 40.0% | |
| TGTCTCACAGGAGACATATT+TGG | + | chr4.2:19668625-19668644 | MS.gene90199:CDS | 40.0% | |
| TGTGAGGTTGTAGATGATGA+TGG | + | chr4.2:19666236-19666255 | MS.gene90199:CDS | 40.0% | |
| TGTTAGGACCCAATATGAGA+GGG | + | chr4.2:19666377-19666396 | MS.gene90199:intron | 40.0% | |
| TTGCAGATATTGAGGGACTT+GGG | + | chr4.2:19669061-19669080 | MS.gene90199:intron | 40.0% | |
| TTTATTGTGAAGCACGGAAC+TGG | + | chr4.2:19665482-19665501 | MS.gene90199:CDS | 40.0% | |
| ! | AATTTTCACGCTCTGCAAAC+TGG | - | chr4.2:19666289-19666308 | None:intergenic | 40.0% |
| ! | AGCGCAGTTAAATTTTTCCG+TGG | + | chr4.2:19667105-19667124 | MS.gene90199:intron | 40.0% |
| ! | ATGGTTTGTCCATTTCAGGT+AGG | + | chr4.2:19669143-19669162 | MS.gene90199:CDS | 40.0% |
| ! | ATTTTGTTCCTACGCAACTC+AGG | + | chr4.2:19665971-19665990 | MS.gene90199:intron | 40.0% |
| ! | CACTTAGCCTTTGTTATGGT+TGG | + | chr4.2:19668536-19668555 | MS.gene90199:intron | 40.0% |
| ! | CTCTTAGTGGATCCTATTTG+TGG | - | chr4.2:19668176-19668195 | None:intergenic | 40.0% |
| ! | CTGCAGTGCAAGGTATTTAA+TGG | - | chr4.2:19667061-19667080 | None:intergenic | 40.0% |
| ! | GGTTATGGTTTGTCCATTTC+AGG | + | chr4.2:19669139-19669158 | MS.gene90199:CDS | 40.0% |
| ! | GTGCTTGCTCCTAATTTTAG+AGG | + | chr4.2:19666914-19666933 | MS.gene90199:intron | 40.0% |
| ! | TCGACACTTAGCCTTTGTTA+TGG | + | chr4.2:19668532-19668551 | MS.gene90199:intron | 40.0% |
| ! | TGTTTGTGCTGTGTTACTGT+TGG | + | chr4.2:19666710-19666729 | MS.gene90199:intron | 40.0% |
| ! | TTCCTTTGATGGTCAACAGT+CGG | + | chr4.2:19665552-19665571 | MS.gene90199:CDS | 40.0% |
| ! | TTGAGCCCAACATATTTTGC+CGG | - | chr4.2:19669118-19669137 | None:intergenic | 40.0% |
| ! | TTGTGAGTTGAAACTCTCTC+TGG | - | chr4.2:19667785-19667804 | None:intergenic | 40.0% |
| ! | TTTTATATCCTGCCTGCTGA+GGG | + | chr4.2:19667715-19667734 | MS.gene90199:intron | 40.0% |
| ! | TTTTTATATCCTGCCTGCTG+AGG | + | chr4.2:19667714-19667733 | MS.gene90199:intron | 40.0% |
| !! | TGTAGATGATGATGGTTCCA+TGG | + | chr4.2:19666244-19666263 | MS.gene90199:CDS | 40.0% |
| !!! | GCCCCTATCTGAGATTTTTT+GGG | - | chr4.2:19667960-19667979 | None:intergenic | 40.0% |
| !!! | GGTGCGTGCATTTTTTTATC+TGG | + | chr4.2:19665630-19665649 | MS.gene90199:intron | 40.0% |
| !!! | TAGGTCACTTTTAGATGGGA+TGG | + | chr4.2:19667346-19667365 | MS.gene90199:CDS | 40.0% |
| !!! | TTTTTTGGGACTTCTAGCCT+TGG | - | chr4.2:19667946-19667965 | None:intergenic | 40.0% |
| AACCTGTTGTTACATTGCCG+TGG | + | chr4.2:19667618-19667637 | MS.gene90199:intron | 45.0% | |
| AACTCACGGGAAAAAGACGA+AGG | - | chr4.2:19667982-19668001 | None:intergenic | 45.0% | |
| AAGCATGAAAGAGGAAGACC+TGG | + | chr4.2:19665517-19665536 | MS.gene90199:CDS | 45.0% | |
| AATGGGTCACATGTATGGCT+TGG | + | chr4.2:19669228-19669247 | MS.gene90199:CDS | 45.0% | |
| ACCTGTGGTGGTACCATATT+TGG | - | chr4.2:19666024-19666043 | None:intergenic | 45.0% | |
| ATAACCTACAGGATGAGGGA+AGG | + | chr4.2:19668782-19668801 | MS.gene90199:CDS | 45.0% | |
| ATACCGCATTGCGACATGAA+GGG | - | chr4.2:19665052-19665071 | None:intergenic | 45.0% | |
| ATCTTCGAGGACATGAAGGA+AGG | + | chr4.2:19668728-19668747 | MS.gene90199:CDS | 45.0% | |
| ATTCCCTTCATGTCGCAATG+CGG | + | chr4.2:19665046-19665065 | MS.gene90199:CDS | 45.0% | |
| ATTCTGCAGCATTGTCCTGA+TGG | + | chr4.2:19668010-19668029 | MS.gene90199:intron | 45.0% | |
| CAATCTTGTGGGCATTAGAG+TGG | - | chr4.2:19668219-19668238 | None:intergenic | 45.0% | |
| CAATGGGATCCTACCTGAAA+TGG | - | chr4.2:19669155-19669174 | None:intergenic | 45.0% | |
| CGAATGTCTTCAATAGCCTC+AGG | - | chr4.2:19665269-19665288 | None:intergenic | 45.0% | |
| CTGTCACAGTGAATGCTGTA+CGG | - | chr4.2:19665595-19665614 | None:intergenic | 45.0% | |
| GACATTCGGAATGGAAAGGT+CGG | + | chr4.2:19665281-19665300 | MS.gene90199:intron | 45.0% | |
| GAGACATATTTGGATCTGCC+AGG | + | chr4.2:19668635-19668654 | MS.gene90199:CDS | 45.0% | |
| GATAAACTAGTGGAACGTGC+TGG | + | chr4.2:19667275-19667294 | MS.gene90199:CDS | 45.0% | |
| GATAAGTTCCTGAGTTGCGT+AGG | - | chr4.2:19665982-19666001 | None:intergenic | 45.0% | |
| GCTTCGTGCTTATAACCTAC+AGG | + | chr4.2:19668771-19668790 | MS.gene90199:CDS | 45.0% | |
| GGAGCATATTGCGATGGTAA+AGG | + | chr4.2:19667367-19667386 | MS.gene90199:CDS | 45.0% | |
| GGATACTGTAGAAGCCAATG+AGG | + | chr4.2:19668804-19668823 | MS.gene90199:CDS | 45.0% | |
| GGTTATAAGCACGAAGCTTG+TGG | - | chr4.2:19668768-19668787 | None:intergenic | 45.0% | |
| GTAGAAGCCAATGAGGAGTT+GGG | + | chr4.2:19668811-19668830 | MS.gene90199:CDS | 45.0% | |
| GTCTTCAATAGCCTCAGGTA+TGG | - | chr4.2:19665264-19665283 | None:intergenic | 45.0% | |
| GTGTGACTGCGGAAATCAAT+TGG | + | chr4.2:19668657-19668676 | MS.gene90199:CDS | 45.0% | |
| GTTGATCTTGCAGTACTTGC+TGG | + | chr4.2:19666191-19666210 | MS.gene90199:CDS | 45.0% | |
| GTTGTGTCGGAGCTTAACTT+TGG | + | chr4.2:19666603-19666622 | MS.gene90199:intron | 45.0% | |
| GTTTCTGTTAGGACCAGAGT+AGG | + | chr4.2:19666562-19666581 | MS.gene90199:intron | 45.0% | |
| TAACCTACAGGATGAGGGAA+GGG | + | chr4.2:19668783-19668802 | MS.gene90199:CDS | 45.0% | |
| TACAGCATTCACTGTGACAG+TGG | + | chr4.2:19665595-19665614 | MS.gene90199:CDS | 45.0% | |
| TATTTGTGGACCCTGGATCA+AGG | - | chr4.2:19668162-19668181 | None:intergenic | 45.0% | |
| TCTATACCTGCCAGACCAAT+AGG | - | chr4.2:19667246-19667265 | None:intergenic | 45.0% | |
| TCTATTTGGATGTGTAGCCC+AGG | + | chr4.2:19668277-19668296 | MS.gene90199:intron | 45.0% | |
| TCTGAGTCAGTGAGTTGTGT+CGG | + | chr4.2:19666590-19666609 | MS.gene90199:intron | 45.0% | |
| TCTTCGAGGACATGAAGGAA+GGG | + | chr4.2:19668729-19668748 | MS.gene90199:CDS | 45.0% | |
| TGTAGAAGCCAATGAGGAGT+TGG | + | chr4.2:19668810-19668829 | MS.gene90199:CDS | 45.0% | |
| TTAGCGGGAAAATATGGCCT+GGG | - | chr4.2:19666121-19666140 | None:intergenic | 45.0% | |
| TTATGTGCGTGGCTCAGATT+TGG | + | chr4.2:19665001-19665020 | MS.gene90199:CDS | 45.0% | |
| TTCCCGCTAAAATACAGGGA+AGG | + | chr4.2:19666131-19666150 | MS.gene90199:CDS | 45.0% | |
| TTGATCCAGGGTCCACAAAT+AGG | + | chr4.2:19668161-19668180 | MS.gene90199:intron | 45.0% | |
| TTTAGCGGGAAAATATGGCC+TGG | - | chr4.2:19666122-19666141 | None:intergenic | 45.0% | |
| ! | AAGGAAGCTCTAATCTCTCC+AGG | - | chr4.2:19665538-19665557 | None:intergenic | 45.0% |
| ! | AGGTTTTGCTTCCATACCTG+AGG | + | chr4.2:19665250-19665269 | MS.gene90199:CDS | 45.0% |
| ! | ATTGGTCTGGCAGGTATAGA+AGG | + | chr4.2:19667246-19667265 | MS.gene90199:intron | 45.0% |
| ! | GACTCAAGGGAGTATGGAAT+TGG | + | chr4.2:19668844-19668863 | MS.gene90199:CDS | 45.0% |
| ! | GGCATTTTCTATAAGCCTGC+AGG | + | chr4.2:19668435-19668454 | MS.gene90199:intron | 45.0% |
| ! | GGTGTGTTGGTATATCTTCG+AGG | + | chr4.2:19668715-19668734 | MS.gene90199:CDS | 45.0% |
| ! | GTGACCCATTTTCACACGTT+TGG | - | chr4.2:19669218-19669237 | None:intergenic | 45.0% |
| ! | TCCTTTGATGGTCAACAGTC+GGG | + | chr4.2:19665553-19665572 | MS.gene90199:CDS | 45.0% |
| ! | TCTTGCAGTACTTGCTGGTT+TGG | + | chr4.2:19666196-19666215 | MS.gene90199:CDS | 45.0% |
| ! | TTAACACCTATTGGTCTGGC+AGG | + | chr4.2:19667237-19667256 | MS.gene90199:intron | 45.0% |
| !! | CCACCTTCCCTGTATTTTAG+CGG | - | chr4.2:19666137-19666156 | None:intergenic | 45.0% |
| !! | GAAGGAAGGGGTATTGGATT+GGG | + | chr4.2:19668742-19668761 | MS.gene90199:CDS | 45.0% |
| !! | TGAAGGAAGGGGTATTGGAT+TGG | + | chr4.2:19668741-19668760 | MS.gene90199:CDS | 45.0% |
| !!! | CACCTTCCCTGTATTTTAGC+GGG | - | chr4.2:19666136-19666155 | None:intergenic | 45.0% |
| !!! | GGCCCCTATCTGAGATTTTT+TGG | - | chr4.2:19667961-19667980 | None:intergenic | 45.0% |
| !!! | TGCCGATTTTCAAATCCTGC+AGG | - | chr4.2:19668453-19668472 | None:intergenic | 45.0% |
| !!! | ATATAAAATTTAAAATTGAA+AGG | - | chr4.2:19668497-19668516 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTATTTTCTTT+AGG | + | chr4.2:19668367-19668386 | MS.gene90199:intron | 5.0% |
| AAATTGTCTGCCAGCTGCCA+AGG | + | chr4.2:19667926-19667945 | MS.gene90199:intron | 50.0% | |
| AGCCACGGCAATGTAACAAC+AGG | - | chr4.2:19667623-19667642 | None:intergenic | 50.0% | |
| AGGCAATCCCAACTCCTCAT+TGG | - | chr4.2:19668821-19668840 | None:intergenic | 50.0% | |
| ATGCAACAGATTGAGGCTGC+TGG | + | chr4.2:19668688-19668707 | MS.gene90199:CDS | 50.0% | |
| ATGCCTACACAAGTGCAGCT+AGG | - | chr4.2:19665764-19665783 | None:intergenic | 50.0% | |
| CAACTTAATGCGGTAGCGCT+TGG | + | chr4.2:19665146-19665165 | MS.gene90199:CDS | 50.0% | |
| CACGGTAGCAGACAACATGA+GGG | - | chr4.2:19666833-19666852 | None:intergenic | 50.0% | |
| CAGAACTCTGCAAAGCCATC+AGG | - | chr4.2:19668028-19668047 | None:intergenic | 50.0% | |
| CATACCGCATTGCGACATGA+AGG | - | chr4.2:19665053-19665072 | None:intergenic | 50.0% | |
| CCATACTCCCTTGAGTCAAC+AGG | - | chr4.2:19668841-19668860 | None:intergenic | 50.0% | |
| CCGCTAAAATACAGGGAAGG+TGG | + | chr4.2:19666134-19666153 | MS.gene90199:CDS | 50.0% | |
| CTTCGAGGACATGAAGGAAG+GGG | + | chr4.2:19668730-19668749 | MS.gene90199:CDS | 50.0% | |
| GACGAGGACAGAGAAAACGA+AGG | + | chr4.2:19665413-19665432 | MS.gene90199:CDS | 50.0% | |
| GACTCAGAGGAATCCTACTC+TGG | - | chr4.2:19666578-19666597 | None:intergenic | 50.0% | |
| GATGATTCCAGTACTGCTCC+TGG | + | chr4.2:19669289-19669308 | MS.gene90199:CDS | 50.0% | |
| GCCAAATATGGTACCACCAC+AGG | + | chr4.2:19666020-19666039 | MS.gene90199:CDS | 50.0% | |
| GGAGTATGGAATTGGTGCAC+AGG | + | chr4.2:19668852-19668871 | MS.gene90199:CDS | 50.0% | |
| GGTGGTATCTTGAAGAGAGC+TGG | + | chr4.2:19666152-19666171 | MS.gene90199:CDS | 50.0% | |
| TAACAGGGTGACATTGGGGA+TGG | + | chr4.2:19668571-19668590 | MS.gene90199:intron | 50.0% | |
| TATCCCTTCCCTCATCCTGT+AGG | - | chr4.2:19668789-19668808 | None:intergenic | 50.0% | |
| TCACGGTAGCAGACAACATG+AGG | - | chr4.2:19666834-19666853 | None:intergenic | 50.0% | |
| TCCCGACTGTTGACCATCAA+AGG | - | chr4.2:19665557-19665576 | None:intergenic | 50.0% | |
| TCGGTACTCTGTCTCTCTGT+GGG | + | chr4.2:19665300-19665319 | MS.gene90199:intron | 50.0% | |
| TCTGCAAACTGGCGAAGCTT+AGG | - | chr4.2:19666278-19666297 | None:intergenic | 50.0% | |
| TGCCTACACAAGTGCAGCTA+GGG | - | chr4.2:19665763-19665782 | None:intergenic | 50.0% | |
| TGGATCCTATTTGTGGACCC+TGG | - | chr4.2:19668169-19668188 | None:intergenic | 50.0% | |
| TGGGATGGAGCATATTGCGA+TGG | + | chr4.2:19667361-19667380 | MS.gene90199:CDS | 50.0% | |
| TTATGTGCCAGGAGCAGTAC+TGG | - | chr4.2:19669299-19669318 | None:intergenic | 50.0% | |
| TTATTACACCCTCAGCAGGC+AGG | - | chr4.2:19667726-19667745 | None:intergenic | 50.0% | |
| TTGATTTCCGCAGTCACACC+TGG | - | chr4.2:19668656-19668675 | None:intergenic | 50.0% | |
| TTGGATGTGTAGCCCAGGAA+TGG | + | chr4.2:19668282-19668301 | MS.gene90199:intron | 50.0% | |
| ! | GATACAGCTCTAACAGGCAG+TGG | + | chr4.2:19665182-19665201 | MS.gene90199:CDS | 50.0% |
| ! | GGACATGAAGGAAGGGGTAT+TGG | + | chr4.2:19668736-19668755 | MS.gene90199:CDS | 50.0% |
| ! | GGAGCAGATACAGCTCTAAC+AGG | + | chr4.2:19665176-19665195 | MS.gene90199:CDS | 50.0% |
| ! | GGATAGGGCAACCACAGTTT+TGG | + | chr4.2:19666055-19666074 | MS.gene90199:CDS | 50.0% |
| ! | GGTAGTGGTTGTAGATGACG+AGG | + | chr4.2:19665397-19665416 | MS.gene90199:CDS | 50.0% |
| ! | GTACACTCAGAGTGTCTCAC+AGG | + | chr4.2:19668613-19668632 | MS.gene90199:CDS | 50.0% |
| ! | GTTAAAGCTGCGTTGACCTC+TGG | + | chr4.2:19665077-19665096 | MS.gene90199:CDS | 50.0% |
| !! | ACTTGCTGGTTTGGATCCTG+TGG | + | chr4.2:19666205-19666224 | MS.gene90199:CDS | 50.0% |
| !! | CCTGTTGACTCAAGGGAGTA+TGG | + | chr4.2:19668838-19668857 | MS.gene90199:CDS | 50.0% |
| !! | GACACAACTCACTGACTCAG+AGG | - | chr4.2:19666591-19666610 | None:intergenic | 50.0% |
| !! | GGGATTGCCTGTTGACTCAA+GGG | + | chr4.2:19668831-19668850 | MS.gene90199:CDS | 50.0% |
| !! | TGGGATTGCCTGTTGACTCA+AGG | + | chr4.2:19668830-19668849 | MS.gene90199:CDS | 50.0% |
| !! | TTTTAGGTCTCCTCCTCCAG+AGG | - | chr4.2:19665096-19665115 | None:intergenic | 50.0% |
| ACCTCACACAGAACTGCCAC+AGG | - | chr4.2:19666224-19666243 | None:intergenic | 55.0% | |
| AGCACAGTTGGCAACACCTG+AGG | + | chr4.2:19665451-19665470 | MS.gene90199:CDS | 55.0% | |
| CACCCTAGCTGCACTTGTGT+AGG | + | chr4.2:19665758-19665777 | MS.gene90199:intron | 55.0% | |
| CCAAGTGATTTCAACCGCCC+AGG | + | chr4.2:19666101-19666120 | MS.gene90199:CDS | 55.0% | |
| CCTGGGCGGTTGAAATCACT+TGG | - | chr4.2:19666104-19666123 | None:intergenic | 55.0% | |
| GATGACTAGATCCCTGGGAC+TGG | - | chr4.2:19668255-19668274 | None:intergenic | 55.0% | |
| GGACATTCATCTGCCTGCTC+AGG | - | chr4.2:19668095-19668114 | None:intergenic | 55.0% | |
| GGATGCAAGGGCCAAAACTG+TGG | - | chr4.2:19666069-19666088 | None:intergenic | 55.0% | |
| GTCGGTACTCTGTCTCTCTG+TGG | + | chr4.2:19665299-19665318 | MS.gene90199:intron | 55.0% | |
| GTGAATGGCCCCCACATTGT+TGG | - | chr4.2:19667314-19667333 | None:intergenic | 55.0% | |
| GTTGGCAACACCTGAGGCTA+TGG | + | chr4.2:19665457-19665476 | MS.gene90199:CDS | 55.0% | |
| TCCTGTGGCAGTTCTGTGTG+AGG | + | chr4.2:19666220-19666239 | MS.gene90199:CDS | 55.0% | |
| TGAAGTCTTGGCCAGTCCCA+GGG | + | chr4.2:19668241-19668260 | MS.gene90199:intron | 55.0% | |
| TGGTACCACCACAGGTGTGT+CGG | + | chr4.2:19666028-19666047 | MS.gene90199:CDS | 55.0% | |
| ! | AAAGCTGCGTTGACCTCTGG+AGG | + | chr4.2:19665080-19665099 | MS.gene90199:CDS | 55.0% |
| !! | AGGTGTGTCGGCTCAGGATA+GGG | + | chr4.2:19666040-19666059 | MS.gene90199:CDS | 55.0% |
| ATCCTGAGCCGACACACCTG+TGG | - | chr4.2:19666039-19666058 | None:intergenic | 60.0% | |
| CAGATTGAGGCTGCTGGCAG+AGG | + | chr4.2:19668694-19668713 | MS.gene90199:CDS | 60.0% | |
| GCGGGAAAATATGGCCTGGG+CGG | - | chr4.2:19666118-19666137 | None:intergenic | 60.0% | |
| GCGGTAGCGCTTGGAACACT+GGG | + | chr4.2:19665155-19665174 | MS.gene90199:CDS | 60.0% | |
| GGATCTGCCAGGTGTGACTG+CGG | + | chr4.2:19668646-19668665 | MS.gene90199:CDS | 60.0% | |
| GTGAAGTCTTGGCCAGTCCC+AGG | + | chr4.2:19668240-19668259 | MS.gene90199:intron | 60.0% | |
| TGCGGTAGCGCTTGGAACAC+TGG | + | chr4.2:19665154-19665173 | MS.gene90199:CDS | 60.0% | |
| !! | CAGGTGTGTCGGCTCAGGAT+AGG | + | chr4.2:19666039-19666058 | MS.gene90199:CDS | 60.0% |
| !! | GGACTTCTAGCCTTGGCAGC+TGG | - | chr4.2:19667939-19667958 | None:intergenic | 60.0% |
| CTGAGCCGACACACCTGTGG+TGG | - | chr4.2:19666036-19666055 | None:intergenic | 65.0% | |
| ! | GCTGCGTTGACCTCTGGAGG+AGG | + | chr4.2:19665083-19665102 | MS.gene90199:CDS | 65.0% |
| ! | GGCTGCTGGCAGAGGTGTGT+TGG | + | chr4.2:19668702-19668721 | MS.gene90199:CDS | 65.0% |
| !! | CACCACAGGTGTGTCGGCTC+AGG | + | chr4.2:19666034-19666053 | MS.gene90199:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 19664996 | 19669318 | 19664996 | ID=MS.gene90199 |
| chr4.2 | mRNA | 19664996 | 19669318 | 19664996 | ID=MS.gene90199.t1;Parent=MS.gene90199 |
| chr4.2 | exon | 19664996 | 19665298 | 19664996 | ID=MS.gene90199.t1.exon1;Parent=MS.gene90199.t1 |
| chr4.2 | CDS | 19664996 | 19665298 | 19664996 | ID=cds.MS.gene90199.t1;Parent=MS.gene90199.t1 |
| chr4.2 | exon | 19665395 | 19665616 | 19665395 | ID=MS.gene90199.t1.exon2;Parent=MS.gene90199.t1 |
| chr4.2 | CDS | 19665395 | 19665616 | 19665395 | ID=cds.MS.gene90199.t1;Parent=MS.gene90199.t1 |
| chr4.2 | exon | 19666017 | 19666339 | 19666017 | ID=MS.gene90199.t1.exon3;Parent=MS.gene90199.t1 |
| chr4.2 | CDS | 19666017 | 19666339 | 19666017 | ID=cds.MS.gene90199.t1;Parent=MS.gene90199.t1 |
| chr4.2 | exon | 19667259 | 19667388 | 19667259 | ID=MS.gene90199.t1.exon4;Parent=MS.gene90199.t1 |
| chr4.2 | CDS | 19667259 | 19667388 | 19667259 | ID=cds.MS.gene90199.t1;Parent=MS.gene90199.t1 |
| chr4.2 | exon | 19668577 | 19668873 | 19668577 | ID=MS.gene90199.t1.exon5;Parent=MS.gene90199.t1 |
| chr4.2 | CDS | 19668577 | 19668873 | 19668577 | ID=cds.MS.gene90199.t1;Parent=MS.gene90199.t1 |
| chr4.2 | exon | 19669067 | 19669318 | 19669067 | ID=MS.gene90199.t1.exon6;Parent=MS.gene90199.t1 |
| chr4.2 | CDS | 19669067 | 19669318 | 19669067 | ID=cds.MS.gene90199.t1;Parent=MS.gene90199.t1 |
| Gene Sequence |
| Protein sequence |
