Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91222.t1 | XP_003615990.1 | 94.2 | 325 | 15 | 2 | 1 | 321 | 1 | 325 | 1.80E-169 | 605.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91222.t1 | P22195 | 59.5 | 309 | 119 | 4 | 12 | 319 | 11 | 314 | 2.1e-97 | 357.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91222.t1 | Q40372 | 94.2 | 325 | 15 | 2 | 1 | 321 | 1 | 325 | 1.3e-169 | 605.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene91222 | 0.822359 | 2.47E-53 | -1.69E-46 |
| MS.gene050329 | MS.gene91222 | 0.808789 | 2.61E-50 | -1.69E-46 |
| MS.gene050344 | MS.gene91222 | 0.803174 | 3.95E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene91222 | 0.800061 | 1.72E-48 | -1.69E-46 |
| MS.gene051996 | MS.gene91222 | 0.820992 | 5.12E-53 | -1.69E-46 |
| MS.gene052011 | MS.gene91222 | 0.810622 | 1.05E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene91222 | 0.856519 | 3.05E-62 | -1.69E-46 |
| MS.gene05240 | MS.gene91222 | 0.827565 | 1.46E-54 | -1.69E-46 |
| MS.gene052702 | MS.gene91222 | 0.814484 | 1.50E-51 | -1.69E-46 |
| MS.gene054138 | MS.gene91222 | 0.832058 | 1.17E-55 | -1.69E-46 |
| MS.gene054147 | MS.gene91222 | 0.803917 | 2.77E-49 | -1.69E-46 |
| MS.gene054277 | MS.gene91222 | 0.90496 | 7.10E-80 | -1.69E-46 |
| MS.gene054742 | MS.gene91222 | 0.86282 | 3.86E-64 | -1.69E-46 |
| MS.gene055215 | MS.gene91222 | 0.822975 | 1.78E-53 | -1.69E-46 |
| MS.gene055601 | MS.gene91222 | 0.822741 | 2.01E-53 | -1.69E-46 |
| MS.gene056076 | MS.gene91222 | 0.809817 | 1.57E-50 | -1.69E-46 |
| MS.gene056330 | MS.gene91222 | 0.865482 | 5.72E-65 | -1.69E-46 |
| MS.gene056690 | MS.gene91222 | 0.826003 | 3.44E-54 | -1.69E-46 |
| MS.gene056691 | MS.gene91222 | 0.834586 | 2.75E-56 | -1.69E-46 |
| MS.gene056899 | MS.gene91222 | 0.833663 | 4.69E-56 | -1.69E-46 |
| MS.gene056920 | MS.gene91222 | 0.872982 | 2.09E-67 | -1.69E-46 |
| MS.gene056922 | MS.gene91222 | 0.827858 | 1.24E-54 | -1.69E-46 |
| MS.gene056923 | MS.gene91222 | 0.85341 | 2.43E-61 | -1.69E-46 |
| MS.gene056924 | MS.gene91222 | 0.848434 | 6.15E-60 | -1.69E-46 |
| MS.gene056925 | MS.gene91222 | 0.809336 | 1.99E-50 | -1.69E-46 |
| MS.gene057544 | MS.gene91222 | 0.829253 | 5.71E-55 | -1.69E-46 |
| MS.gene058177 | MS.gene91222 | 0.801708 | 7.93E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene91222 | 0.80096 | 1.13E-48 | -1.69E-46 |
| MS.gene058381 | MS.gene91222 | 0.802066 | 6.69E-49 | -1.69E-46 |
| MS.gene059039 | MS.gene91222 | 0.800899 | 1.16E-48 | -1.69E-46 |
| MS.gene059043 | MS.gene91222 | 0.826371 | 2.81E-54 | -1.69E-46 |
| MS.gene060087 | MS.gene91222 | 0.842908 | 1.94E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91222.t1 | MTR_5g074860 | 94.154 | 325 | 15 | 2 | 1 | 321 | 1 | 325 | 0.0 | 620 |
| MS.gene91222.t1 | MTR_5g074860 | 82.462 | 325 | 14 | 3 | 1 | 321 | 1 | 286 | 0.0 | 523 |
| MS.gene91222.t1 | MTR_5g074760 | 71.250 | 320 | 92 | 0 | 1 | 320 | 1 | 320 | 2.15e-171 | 478 |
| MS.gene91222.t1 | MTR_5g074740 | 70.625 | 320 | 94 | 0 | 1 | 320 | 1 | 320 | 1.53e-170 | 476 |
| MS.gene91222.t1 | MTR_5g074710 | 70.312 | 320 | 95 | 0 | 1 | 320 | 1 | 320 | 2.05e-170 | 476 |
| MS.gene91222.t1 | MTR_3g467600 | 66.242 | 314 | 104 | 2 | 9 | 320 | 10 | 323 | 2.82e-152 | 430 |
| MS.gene91222.t1 | MTR_4g029170 | 60.252 | 317 | 120 | 4 | 6 | 320 | 8 | 320 | 2.18e-134 | 384 |
| MS.gene91222.t1 | MTR_4g029180 | 62.712 | 295 | 104 | 4 | 28 | 320 | 30 | 320 | 2.84e-130 | 374 |
| MS.gene91222.t1 | MTR_3g466200 | 59.621 | 317 | 118 | 7 | 9 | 320 | 8 | 319 | 4.50e-129 | 371 |
| MS.gene91222.t1 | MTR_5g083860 | 57.895 | 323 | 127 | 6 | 1 | 320 | 8 | 324 | 1.97e-125 | 362 |
| MS.gene91222.t1 | MTR_3g094650 | 58.075 | 322 | 127 | 5 | 1 | 319 | 4 | 320 | 2.94e-125 | 361 |
| MS.gene91222.t1 | MTR_4g029200 | 55.728 | 323 | 135 | 5 | 1 | 320 | 20 | 337 | 2.50e-122 | 355 |
| MS.gene91222.t1 | MTR_3g094670 | 59.683 | 315 | 118 | 6 | 9 | 319 | 11 | 320 | 4.63e-122 | 353 |
| MS.gene91222.t1 | MTR_5g074970 | 56.231 | 329 | 129 | 7 | 1 | 319 | 1 | 324 | 6.97e-120 | 348 |
| MS.gene91222.t1 | MTR_3g072190 | 55.140 | 321 | 134 | 5 | 5 | 320 | 2 | 317 | 4.09e-119 | 345 |
| MS.gene91222.t1 | MTR_2g084020 | 54.574 | 317 | 138 | 5 | 6 | 320 | 5 | 317 | 7.63e-117 | 340 |
| MS.gene91222.t1 | MTR_2g084010 | 55.205 | 317 | 136 | 5 | 6 | 320 | 5 | 317 | 3.48e-116 | 338 |
| MS.gene91222.t1 | MTR_3g094630 | 56.875 | 320 | 128 | 6 | 6 | 320 | 7 | 321 | 1.66e-115 | 337 |
| MS.gene91222.t1 | MTR_2g084080 | 54.747 | 316 | 136 | 6 | 7 | 320 | 6 | 316 | 6.33e-115 | 335 |
| MS.gene91222.t1 | MTR_1g115900 | 51.385 | 325 | 148 | 6 | 1 | 320 | 1 | 320 | 1.60e-113 | 332 |
| MS.gene91222.t1 | MTR_4g029190 | 53.538 | 325 | 141 | 7 | 1 | 320 | 20 | 339 | 1.64e-113 | 332 |
| MS.gene91222.t1 | MTR_2g084110 | 54.574 | 317 | 137 | 6 | 6 | 320 | 5 | 316 | 8.67e-113 | 330 |
| MS.gene91222.t1 | MTR_7g072480 | 54.194 | 310 | 136 | 4 | 12 | 320 | 11 | 315 | 1.86e-112 | 328 |
| MS.gene91222.t1 | MTR_7g026990 | 51.534 | 326 | 147 | 6 | 1 | 320 | 1 | 321 | 2.38e-112 | 328 |
| MS.gene91222.t1 | MTR_3g466180 | 53.503 | 314 | 140 | 4 | 8 | 320 | 14 | 322 | 1.48e-111 | 327 |
| MS.gene91222.t1 | MTR_2g084000 | 51.104 | 317 | 148 | 5 | 7 | 320 | 6 | 318 | 4.03e-110 | 323 |
| MS.gene91222.t1 | MTR_7g072510 | 50.962 | 312 | 147 | 4 | 10 | 320 | 5 | 311 | 4.47e-110 | 322 |
| MS.gene91222.t1 | MTR_2g084090 | 52.516 | 318 | 143 | 7 | 6 | 320 | 5 | 317 | 4.64e-110 | 323 |
| MS.gene91222.t1 | MTR_4g083710 | 50.459 | 327 | 151 | 7 | 1 | 320 | 1 | 323 | 2.39e-109 | 321 |
| MS.gene91222.t1 | MTR_5g074700 | 67.713 | 223 | 58 | 1 | 98 | 320 | 5 | 213 | 1.21e-106 | 310 |
| MS.gene91222.t1 | MTR_8g076820 | 51.307 | 306 | 137 | 5 | 23 | 320 | 28 | 329 | 2.86e-104 | 308 |
| MS.gene91222.t1 | MTR_5g021060 | 50.658 | 304 | 138 | 5 | 25 | 320 | 30 | 329 | 4.78e-102 | 303 |
| MS.gene91222.t1 | MTR_1g054205 | 47.273 | 330 | 161 | 7 | 1 | 321 | 1 | 326 | 3.03e-100 | 298 |
| MS.gene91222.t1 | MTR_4g074995 | 49.206 | 315 | 135 | 8 | 14 | 320 | 10 | 307 | 5.85e-99 | 294 |
| MS.gene91222.t1 | MTR_1g022970 | 49.342 | 304 | 143 | 4 | 25 | 320 | 46 | 346 | 9.61e-97 | 290 |
| MS.gene91222.t1 | MTR_3g072190 | 56.299 | 254 | 105 | 4 | 68 | 320 | 2 | 250 | 2.92e-96 | 285 |
| MS.gene91222.t1 | MTR_2g029560 | 46.395 | 319 | 160 | 4 | 10 | 320 | 9 | 324 | 1.34e-95 | 287 |
| MS.gene91222.t1 | MTR_7g093370 | 46.584 | 322 | 159 | 6 | 8 | 320 | 53 | 370 | 7.34e-95 | 286 |
| MS.gene91222.t1 | MTR_4g122640 | 47.712 | 306 | 150 | 5 | 21 | 320 | 34 | 335 | 2.33e-93 | 281 |
| MS.gene91222.t1 | MTR_4g074990 | 46.106 | 321 | 145 | 7 | 5 | 320 | 7 | 304 | 8.92e-93 | 278 |
| MS.gene91222.t1 | MTR_2g040000 | 46.154 | 325 | 157 | 7 | 9 | 320 | 11 | 330 | 1.61e-92 | 278 |
| MS.gene91222.t1 | MTR_4g125940 | 46.626 | 326 | 159 | 6 | 5 | 320 | 8 | 328 | 7.49e-91 | 274 |
| MS.gene91222.t1 | MTR_2g028980 | 47.022 | 319 | 158 | 4 | 10 | 320 | 14 | 329 | 7.51e-91 | 275 |
| MS.gene91222.t1 | MTR_5g017850 | 47.706 | 327 | 155 | 9 | 4 | 320 | 5 | 325 | 1.23e-90 | 273 |
| MS.gene91222.t1 | MTR_4g074980 | 46.965 | 313 | 137 | 5 | 9 | 320 | 9 | 293 | 1.29e-90 | 272 |
| MS.gene91222.t1 | MTR_5g017860 | 46.789 | 327 | 158 | 8 | 4 | 320 | 5 | 325 | 2.23e-89 | 270 |
| MS.gene91222.t1 | MTR_2g029750 | 45.455 | 319 | 163 | 4 | 10 | 320 | 14 | 329 | 7.07e-88 | 267 |
| MS.gene91222.t1 | MTR_2g029815 | 45.625 | 320 | 163 | 5 | 9 | 320 | 13 | 329 | 1.25e-87 | 266 |
| MS.gene91222.t1 | MTR_4g031140 | 46.580 | 307 | 150 | 5 | 21 | 320 | 24 | 323 | 6.10e-87 | 265 |
| MS.gene91222.t1 | MTR_5g014100 | 46.965 | 313 | 147 | 7 | 22 | 320 | 23 | 330 | 7.38e-87 | 264 |
| MS.gene91222.t1 | MTR_2g029800 | 45.455 | 319 | 163 | 4 | 10 | 320 | 14 | 329 | 9.36e-87 | 265 |
| MS.gene91222.t1 | MTR_4g030890 | 47.195 | 303 | 146 | 5 | 25 | 320 | 100 | 395 | 2.10e-86 | 266 |
| MS.gene91222.t1 | MTR_2g029860 | 44.062 | 320 | 168 | 4 | 10 | 321 | 14 | 330 | 3.83e-86 | 263 |
| MS.gene91222.t1 | MTR_5g049280 | 44.904 | 314 | 159 | 7 | 18 | 320 | 26 | 336 | 4.20e-86 | 262 |
| MS.gene91222.t1 | MTR_2g029820 | 44.514 | 319 | 166 | 4 | 10 | 320 | 14 | 329 | 4.93e-85 | 260 |
| MS.gene91222.t1 | MTR_2g029740 | 45.426 | 317 | 160 | 6 | 10 | 317 | 14 | 326 | 7.28e-85 | 259 |
| MS.gene91222.t1 | MTR_2g029830 | 44.805 | 308 | 159 | 4 | 21 | 320 | 24 | 328 | 1.87e-84 | 259 |
| MS.gene91222.t1 | MTR_2g029850 | 46.082 | 319 | 161 | 5 | 10 | 320 | 14 | 329 | 4.72e-84 | 258 |
| MS.gene91222.t1 | MTR_2g029730 | 45.122 | 328 | 169 | 5 | 1 | 320 | 1 | 325 | 5.82e-84 | 257 |
| MS.gene91222.t1 | MTR_4g125940 | 50.181 | 277 | 123 | 6 | 54 | 320 | 2 | 273 | 3.18e-83 | 253 |
| MS.gene91222.t1 | MTR_1g101830 | 43.260 | 319 | 164 | 9 | 10 | 320 | 12 | 321 | 6.85e-82 | 251 |
| MS.gene91222.t1 | MTR_4g074980 | 50.403 | 248 | 115 | 5 | 9 | 251 | 9 | 253 | 5.78e-81 | 246 |
| MS.gene91222.t1 | MTR_2g029910 | 43.614 | 321 | 169 | 6 | 10 | 321 | 15 | 332 | 2.37e-80 | 248 |
| MS.gene91222.t1 | MTR_1g025980 | 41.945 | 329 | 172 | 9 | 1 | 321 | 1 | 318 | 4.53e-80 | 246 |
| MS.gene91222.t1 | MTR_5g022870 | 42.812 | 320 | 164 | 10 | 9 | 320 | 7 | 315 | 2.82e-78 | 241 |
| MS.gene91222.t1 | MTR_1g077000 | 42.761 | 297 | 160 | 7 | 25 | 320 | 39 | 326 | 1.07e-77 | 240 |
| MS.gene91222.t1 | MTR_0155s0040 | 40.557 | 323 | 180 | 8 | 1 | 320 | 1 | 314 | 1.37e-76 | 237 |
| MS.gene91222.t1 | MTR_3g092990 | 40.810 | 321 | 176 | 6 | 9 | 320 | 10 | 325 | 8.49e-75 | 233 |
| MS.gene91222.t1 | MTR_1g038680 | 42.244 | 303 | 160 | 7 | 29 | 320 | 33 | 331 | 2.19e-72 | 227 |
| MS.gene91222.t1 | MTR_7g029030 | 40.881 | 318 | 176 | 9 | 8 | 319 | 7 | 318 | 4.02e-71 | 223 |
| MS.gene91222.t1 | MTR_8g075100 | 40.645 | 310 | 165 | 9 | 19 | 320 | 20 | 318 | 5.39e-71 | 223 |
| MS.gene91222.t1 | MTR_2g088770 | 41.975 | 324 | 167 | 10 | 9 | 320 | 10 | 324 | 1.67e-69 | 219 |
| MS.gene91222.t1 | MTR_6g027440 | 39.308 | 318 | 179 | 8 | 7 | 318 | 2 | 311 | 2.83e-68 | 216 |
| MS.gene91222.t1 | MTR_1g086320 | 37.615 | 327 | 191 | 5 | 4 | 320 | 9 | 332 | 9.04e-68 | 215 |
| MS.gene91222.t1 | MTR_1g086490 | 37.725 | 334 | 188 | 4 | 4 | 320 | 9 | 339 | 1.13e-67 | 215 |
| MS.gene91222.t1 | MTR_2g029830 | 45.349 | 258 | 130 | 4 | 71 | 320 | 6 | 260 | 3.11e-67 | 212 |
| MS.gene91222.t1 | MTR_2g008710 | 40.741 | 324 | 167 | 11 | 8 | 317 | 9 | 321 | 3.75e-66 | 211 |
| MS.gene91222.t1 | MTR_7g086870 | 39.465 | 299 | 164 | 8 | 25 | 318 | 22 | 308 | 2.73e-65 | 208 |
| MS.gene91222.t1 | MTR_7g086820 | 38.206 | 301 | 172 | 7 | 23 | 318 | 18 | 309 | 3.26e-64 | 205 |
| MS.gene91222.t1 | MTR_4g127670 | 41.801 | 311 | 152 | 11 | 25 | 319 | 24 | 321 | 3.49e-64 | 206 |
| MS.gene91222.t1 | MTR_4g114210 | 39.875 | 321 | 170 | 10 | 12 | 319 | 8 | 318 | 4.24e-64 | 205 |
| MS.gene91222.t1 | MTR_1g009750 | 39.940 | 333 | 181 | 11 | 1 | 320 | 1 | 327 | 7.27e-64 | 205 |
| MS.gene91222.t1 | MTR_3g092990 | 38.629 | 321 | 172 | 7 | 9 | 320 | 10 | 314 | 2.83e-63 | 203 |
| MS.gene91222.t1 | MTR_7g107520 | 39.755 | 327 | 173 | 11 | 7 | 320 | 4 | 319 | 6.25e-63 | 202 |
| MS.gene91222.t1 | MTR_4g046713 | 37.805 | 328 | 185 | 8 | 1 | 317 | 3 | 322 | 2.69e-62 | 201 |
| MS.gene91222.t1 | MTR_5g016010 | 37.346 | 324 | 184 | 9 | 8 | 317 | 7 | 325 | 2.94e-62 | 201 |
| MS.gene91222.t1 | MTR_3g072210 | 52.406 | 187 | 84 | 4 | 136 | 320 | 54 | 237 | 7.28e-61 | 194 |
| MS.gene91222.t1 | MTR_2g099175 | 39.088 | 307 | 164 | 9 | 25 | 318 | 36 | 332 | 8.38e-61 | 197 |
| MS.gene91222.t1 | MTR_4g133800 | 39.000 | 300 | 161 | 10 | 30 | 320 | 46 | 332 | 3.36e-60 | 196 |
| MS.gene91222.t1 | MTR_2g077990 | 37.798 | 336 | 163 | 9 | 25 | 320 | 76 | 405 | 2.86e-59 | 196 |
| MS.gene91222.t1 | MTR_4g095450 | 38.365 | 318 | 175 | 10 | 12 | 317 | 12 | 320 | 5.86e-59 | 192 |
| MS.gene91222.t1 | MTR_8g062780 | 36.335 | 322 | 189 | 8 | 6 | 317 | 5 | 320 | 8.29e-59 | 192 |
| MS.gene91222.t1 | MTR_1g090760 | 35.294 | 323 | 190 | 9 | 9 | 317 | 9 | 326 | 2.36e-58 | 191 |
| MS.gene91222.t1 | MTR_5g074770 | 79.646 | 113 | 18 | 1 | 209 | 321 | 2 | 109 | 4.81e-58 | 182 |
| MS.gene91222.t1 | MTR_2g078610 | 37.202 | 336 | 165 | 9 | 25 | 320 | 76 | 405 | 1.60e-57 | 191 |
| MS.gene91222.t1 | MTR_4g132490 | 34.323 | 303 | 187 | 5 | 25 | 320 | 29 | 326 | 2.92e-57 | 188 |
| MS.gene91222.t1 | MTR_2g067440 | 37.126 | 334 | 165 | 9 | 25 | 320 | 60 | 386 | 4.12e-57 | 189 |
| MS.gene91222.t1 | MTR_0286s0010 | 35.294 | 323 | 193 | 8 | 8 | 320 | 17 | 333 | 6.35e-57 | 187 |
| MS.gene91222.t1 | MTR_6g008075 | 35.294 | 323 | 193 | 8 | 8 | 320 | 17 | 333 | 6.35e-57 | 187 |
| MS.gene91222.t1 | MTR_2g437770 | 37.618 | 319 | 172 | 10 | 16 | 320 | 35 | 340 | 3.53e-56 | 186 |
| MS.gene91222.t1 | MTR_4g087965 | 37.748 | 302 | 170 | 9 | 29 | 317 | 46 | 342 | 5.92e-56 | 185 |
| MS.gene91222.t1 | MTR_6g043280 | 36.755 | 302 | 174 | 9 | 25 | 320 | 41 | 331 | 3.21e-54 | 180 |
| MS.gene91222.t1 | MTR_2g008160 | 38.411 | 302 | 163 | 10 | 29 | 317 | 28 | 319 | 4.33e-54 | 179 |
| MS.gene91222.t1 | MTR_6g043240 | 38.667 | 300 | 169 | 10 | 25 | 320 | 42 | 330 | 1.53e-52 | 176 |
| MS.gene91222.t1 | MTR_1g009750 | 36.336 | 333 | 176 | 11 | 1 | 320 | 1 | 310 | 1.61e-52 | 175 |
| MS.gene91222.t1 | MTR_2g078280 | 36.533 | 323 | 159 | 9 | 25 | 307 | 76 | 392 | 2.58e-51 | 174 |
| MS.gene91222.t1 | MTR_2g067450 | 35.691 | 311 | 173 | 8 | 25 | 320 | 11 | 309 | 3.10e-50 | 169 |
| MS.gene91222.t1 | MTR_1g066710 | 33.993 | 303 | 186 | 7 | 25 | 320 | 27 | 322 | 4.08e-50 | 169 |
| MS.gene91222.t1 | MTR_6g043460 | 34.848 | 330 | 194 | 10 | 1 | 317 | 3 | 324 | 4.45e-50 | 170 |
| MS.gene91222.t1 | MTR_2g008730 | 36.025 | 322 | 159 | 10 | 8 | 317 | 11 | 297 | 1.27e-49 | 167 |
| MS.gene91222.t1 | MTR_3g105790 | 34.251 | 327 | 196 | 6 | 1 | 317 | 1 | 318 | 1.16e-48 | 166 |
| MS.gene91222.t1 | MTR_1g066380 | 32.899 | 307 | 184 | 8 | 25 | 320 | 27 | 322 | 2.23e-46 | 159 |
| MS.gene91222.t1 | MTR_4g132110 | 32.508 | 323 | 202 | 8 | 1 | 317 | 12 | 324 | 1.80e-45 | 157 |
| MS.gene91222.t1 | MTR_1g066640 | 32.899 | 307 | 184 | 8 | 25 | 320 | 27 | 322 | 2.75e-45 | 157 |
| MS.gene91222.t1 | MTR_7g072490 | 40.650 | 246 | 86 | 6 | 71 | 315 | 2 | 188 | 4.61e-45 | 152 |
| MS.gene91222.t1 | MTR_5g033470 | 32.459 | 305 | 184 | 10 | 29 | 318 | 77 | 374 | 7.86e-45 | 157 |
| MS.gene91222.t1 | MTR_0147s0010 | 32.622 | 328 | 172 | 10 | 22 | 320 | 74 | 381 | 4.86e-44 | 155 |
| MS.gene91222.t1 | MTR_1g066680 | 32.248 | 307 | 185 | 9 | 25 | 320 | 27 | 321 | 7.88e-44 | 153 |
| MS.gene91222.t1 | MTR_2g008160 | 35.811 | 296 | 144 | 10 | 29 | 317 | 28 | 284 | 9.54e-44 | 152 |
| MS.gene91222.t1 | MTR_4g132110 | 32.012 | 328 | 202 | 9 | 1 | 317 | 12 | 329 | 3.83e-43 | 151 |
| MS.gene91222.t1 | MTR_3g072260 | 64.220 | 109 | 38 | 1 | 25 | 133 | 26 | 133 | 5.45e-42 | 142 |
| MS.gene91222.t1 | MTR_2g029880 | 43.617 | 188 | 84 | 5 | 143 | 320 | 12 | 187 | 7.03e-41 | 142 |
| MS.gene91222.t1 | MTR_2g008160 | 46.199 | 171 | 85 | 5 | 29 | 199 | 28 | 191 | 3.08e-40 | 140 |
| MS.gene91222.t1 | MTR_1g066380 | 32.700 | 263 | 155 | 8 | 69 | 320 | 3 | 254 | 1.75e-37 | 134 |
| MS.gene91222.t1 | MTR_3g105790 | 35.417 | 240 | 140 | 5 | 88 | 317 | 8 | 242 | 2.23e-33 | 123 |
| MS.gene91222.t1 | MTR_2g078560 | 31.878 | 229 | 113 | 7 | 131 | 320 | 95 | 319 | 5.47e-24 | 100 |
| MS.gene91222.t1 | MTR_3g462850 | 40.714 | 140 | 72 | 5 | 192 | 320 | 9 | 148 | 1.15e-23 | 95.1 |
| MS.gene91222.t1 | MTR_2g077980 | 30.104 | 289 | 151 | 11 | 77 | 320 | 1 | 283 | 1.77e-22 | 95.5 |
| MS.gene91222.t1 | MTR_4g031040 | 36.310 | 168 | 68 | 3 | 86 | 253 | 3 | 131 | 7.75e-22 | 89.7 |
| MS.gene91222.t1 | MTR_5g058120 | 36.709 | 158 | 89 | 5 | 163 | 317 | 6 | 155 | 1.29e-19 | 87.0 |
| MS.gene91222.t1 | MTR_7g086790 | 34.375 | 192 | 107 | 8 | 72 | 262 | 17 | 190 | 1.58e-19 | 85.1 |
| MS.gene91222.t1 | MTR_1g089005 | 39.062 | 128 | 70 | 3 | 17 | 138 | 7 | 132 | 1.68e-17 | 78.6 |
| MS.gene91222.t1 | MTR_4g114220 | 48.193 | 83 | 32 | 3 | 51 | 133 | 29 | 100 | 2.50e-17 | 77.8 |
| MS.gene91222.t1 | MTR_2g029930 | 42.056 | 107 | 37 | 2 | 8 | 103 | 2 | 94 | 2.58e-17 | 76.6 |
| MS.gene91222.t1 | MTR_6g048160 | 52.055 | 73 | 30 | 3 | 64 | 136 | 22 | 89 | 1.23e-16 | 74.3 |
| MS.gene91222.t1 | MTR_3g107060 | 26.045 | 311 | 159 | 13 | 8 | 302 | 57 | 312 | 2.06e-14 | 73.2 |
| MS.gene91222.t1 | MTR_3g086710 | 53.125 | 64 | 30 | 0 | 7 | 70 | 1 | 64 | 6.06e-14 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91222.t1 | AT5G05340 | 58.472 | 301 | 117 | 5 | 23 | 320 | 28 | 323 | 5.97e-123 | 355 |
| MS.gene91222.t1 | AT5G58400 | 53.481 | 316 | 137 | 7 | 9 | 319 | 13 | 323 | 2.94e-108 | 318 |
| MS.gene91222.t1 | AT5G58390 | 54.259 | 317 | 136 | 6 | 7 | 319 | 3 | 314 | 4.05e-107 | 315 |
| MS.gene91222.t1 | AT1G14540 | 50.316 | 316 | 150 | 6 | 8 | 320 | 3 | 314 | 1.02e-104 | 309 |
| MS.gene91222.t1 | AT1G14550 | 50.000 | 314 | 147 | 7 | 10 | 317 | 8 | 317 | 6.75e-103 | 305 |
| MS.gene91222.t1 | AT4G36430 | 49.671 | 304 | 141 | 5 | 25 | 320 | 30 | 329 | 1.96e-102 | 304 |
| MS.gene91222.t1 | AT2G18150 | 49.013 | 304 | 143 | 5 | 25 | 320 | 36 | 335 | 5.83e-102 | 303 |
| MS.gene91222.t1 | AT2G18140 | 48.494 | 332 | 147 | 7 | 9 | 320 | 7 | 334 | 9.56e-101 | 300 |
| MS.gene91222.t1 | AT5G66390 | 49.026 | 308 | 145 | 5 | 21 | 320 | 29 | 332 | 1.46e-100 | 299 |
| MS.gene91222.t1 | AT5G06720 | 46.894 | 322 | 160 | 5 | 8 | 321 | 15 | 333 | 4.84e-100 | 298 |
| MS.gene91222.t1 | AT1G44970 | 49.013 | 304 | 144 | 4 | 25 | 320 | 45 | 345 | 5.67e-96 | 288 |
| MS.gene91222.t1 | AT3G50990 | 49.020 | 306 | 144 | 6 | 23 | 320 | 39 | 340 | 8.04e-96 | 287 |
| MS.gene91222.t1 | AT5G06730 | 45.652 | 322 | 164 | 5 | 8 | 321 | 16 | 334 | 1.11e-95 | 288 |
| MS.gene91222.t1 | AT4G08770 | 46.774 | 310 | 152 | 6 | 21 | 320 | 20 | 326 | 4.77e-89 | 270 |
| MS.gene91222.t1 | AT1G49570 | 47.697 | 304 | 143 | 7 | 25 | 317 | 48 | 346 | 3.89e-88 | 268 |
| MS.gene91222.t1 | AT2G38380 | 46.602 | 309 | 153 | 5 | 21 | 320 | 27 | 332 | 5.95e-88 | 267 |
| MS.gene91222.t1 | AT4G08780 | 45.484 | 310 | 156 | 6 | 21 | 320 | 20 | 326 | 1.83e-87 | 266 |
| MS.gene91222.t1 | AT1G68850 | 42.042 | 333 | 170 | 8 | 8 | 320 | 5 | 334 | 6.53e-87 | 264 |
| MS.gene91222.t1 | AT4G16270 | 48.333 | 300 | 141 | 6 | 29 | 320 | 54 | 347 | 1.61e-86 | 264 |
| MS.gene91222.t1 | AT2G38390 | 46.602 | 309 | 153 | 5 | 21 | 320 | 27 | 332 | 2.11e-86 | 263 |
| MS.gene91222.t1 | AT3G32980 | 46.129 | 310 | 154 | 7 | 21 | 320 | 27 | 333 | 8.05e-86 | 262 |
| MS.gene91222.t1 | AT2G35380 | 46.041 | 341 | 156 | 10 | 1 | 320 | 1 | 334 | 4.40e-85 | 259 |
| MS.gene91222.t1 | AT5G19880 | 44.611 | 334 | 165 | 7 | 1 | 320 | 1 | 328 | 4.90e-85 | 259 |
| MS.gene91222.t1 | AT5G51890 | 43.636 | 330 | 167 | 10 | 1 | 320 | 1 | 321 | 6.63e-85 | 259 |
| MS.gene91222.t1 | AT2G22420 | 42.056 | 321 | 171 | 6 | 7 | 320 | 6 | 318 | 9.71e-85 | 258 |
| MS.gene91222.t1 | AT3G49110 | 44.785 | 326 | 163 | 8 | 9 | 320 | 13 | 335 | 1.98e-84 | 259 |
| MS.gene91222.t1 | AT3G49120 | 46.104 | 308 | 153 | 7 | 23 | 320 | 30 | 334 | 1.64e-83 | 256 |
| MS.gene91222.t1 | AT5G42180 | 44.615 | 325 | 153 | 11 | 9 | 321 | 8 | 317 | 1.30e-82 | 253 |
| MS.gene91222.t1 | AT5G19890 | 45.511 | 323 | 157 | 9 | 8 | 320 | 13 | 326 | 3.87e-82 | 252 |
| MS.gene91222.t1 | AT3G01190 | 42.857 | 329 | 166 | 10 | 1 | 318 | 1 | 318 | 8.17e-76 | 235 |
| MS.gene91222.t1 | AT1G71695 | 44.147 | 299 | 154 | 7 | 25 | 317 | 44 | 335 | 6.67e-74 | 232 |
| MS.gene91222.t1 | AT5G15180 | 41.590 | 327 | 167 | 10 | 9 | 320 | 11 | 328 | 2.69e-72 | 227 |
| MS.gene91222.t1 | AT4G33420 | 41.640 | 317 | 172 | 9 | 6 | 320 | 19 | 324 | 1.32e-71 | 225 |
| MS.gene91222.t1 | AT4G33420 | 41.640 | 317 | 172 | 9 | 6 | 320 | 66 | 371 | 4.90e-71 | 225 |
| MS.gene91222.t1 | AT4G11290 | 39.252 | 321 | 178 | 8 | 8 | 317 | 8 | 322 | 7.37e-67 | 213 |
| MS.gene91222.t1 | AT3G03670 | 39.185 | 319 | 179 | 8 | 9 | 318 | 6 | 318 | 1.18e-66 | 212 |
| MS.gene91222.t1 | AT1G05240 | 38.816 | 304 | 169 | 7 | 24 | 317 | 25 | 321 | 1.43e-66 | 212 |
| MS.gene91222.t1 | AT1G05250 | 38.816 | 304 | 169 | 7 | 24 | 317 | 25 | 321 | 1.43e-66 | 212 |
| MS.gene91222.t1 | AT5G17820 | 39.498 | 319 | 171 | 10 | 9 | 319 | 7 | 311 | 2.03e-66 | 211 |
| MS.gene91222.t1 | AT5G17820 | 39.498 | 319 | 171 | 10 | 9 | 319 | 60 | 364 | 1.38e-65 | 211 |
| MS.gene91222.t1 | AT5G64120 | 41.472 | 299 | 158 | 8 | 29 | 320 | 39 | 327 | 2.88e-65 | 209 |
| MS.gene91222.t1 | AT1G05260 | 38.019 | 313 | 179 | 8 | 14 | 317 | 15 | 321 | 4.47e-65 | 208 |
| MS.gene91222.t1 | AT3G21770 | 39.683 | 315 | 171 | 9 | 14 | 317 | 18 | 324 | 9.91e-65 | 207 |
| MS.gene91222.t1 | AT4G26010 | 39.172 | 314 | 177 | 10 | 8 | 318 | 4 | 306 | 4.08e-64 | 205 |
| MS.gene91222.t1 | AT4G26010 | 39.172 | 314 | 177 | 10 | 8 | 318 | 32 | 334 | 6.08e-64 | 206 |
| MS.gene91222.t1 | AT4G37530 | 39.610 | 308 | 170 | 8 | 21 | 317 | 23 | 325 | 5.09e-63 | 203 |
| MS.gene91222.t1 | AT2G35380 | 47.791 | 249 | 109 | 8 | 87 | 320 | 4 | 246 | 8.28e-63 | 199 |
| MS.gene91222.t1 | AT5G40150 | 37.134 | 307 | 183 | 6 | 16 | 317 | 23 | 324 | 1.14e-61 | 199 |
| MS.gene91222.t1 | AT1G34510 | 39.414 | 307 | 174 | 9 | 14 | 318 | 10 | 306 | 1.18e-61 | 199 |
| MS.gene91222.t1 | AT2G41480 | 37.730 | 326 | 180 | 9 | 8 | 320 | 12 | 327 | 4.93e-61 | 197 |
| MS.gene91222.t1 | AT4G37520 | 38.889 | 306 | 171 | 8 | 23 | 317 | 25 | 325 | 9.87e-61 | 197 |
| MS.gene91222.t1 | AT3G28200 | 36.700 | 297 | 179 | 6 | 25 | 317 | 21 | 312 | 5.30e-60 | 195 |
| MS.gene91222.t1 | AT4G37520 | 38.562 | 306 | 169 | 9 | 23 | 317 | 25 | 322 | 8.81e-59 | 192 |
| MS.gene91222.t1 | AT5G14130 | 35.826 | 321 | 184 | 8 | 9 | 317 | 16 | 326 | 1.87e-58 | 191 |
| MS.gene91222.t1 | AT5G14130 | 35.826 | 321 | 184 | 8 | 9 | 317 | 57 | 367 | 3.46e-58 | 192 |
| MS.gene91222.t1 | AT1G30870 | 37.821 | 312 | 172 | 9 | 18 | 319 | 44 | 343 | 8.35e-58 | 190 |
| MS.gene91222.t1 | AT5G39580 | 39.062 | 320 | 176 | 11 | 10 | 320 | 9 | 318 | 1.65e-57 | 188 |
| MS.gene91222.t1 | AT4G33870 | 33.929 | 336 | 171 | 9 | 29 | 320 | 72 | 400 | 3.05e-57 | 190 |
| MS.gene91222.t1 | AT4G25980 | 36.778 | 329 | 189 | 9 | 1 | 317 | 1 | 322 | 4.42e-57 | 187 |
| MS.gene91222.t1 | AT1G24110 | 34.796 | 319 | 190 | 8 | 9 | 317 | 8 | 318 | 6.36e-57 | 187 |
| MS.gene91222.t1 | AT5G67400 | 37.994 | 329 | 177 | 11 | 9 | 317 | 4 | 325 | 1.31e-56 | 186 |
| MS.gene91222.t1 | AT4G30170 | 37.898 | 314 | 167 | 11 | 22 | 320 | 24 | 324 | 1.00e-55 | 184 |
| MS.gene91222.t1 | AT2G18980 | 36.446 | 332 | 189 | 9 | 1 | 320 | 1 | 322 | 1.12e-55 | 184 |
| MS.gene91222.t1 | AT1G77100 | 39.557 | 316 | 179 | 10 | 8 | 317 | 6 | 315 | 2.17e-55 | 183 |
| MS.gene91222.t1 | AT5G47000 | 33.754 | 317 | 197 | 7 | 8 | 317 | 16 | 326 | 2.61e-55 | 183 |
| MS.gene91222.t1 | AT2G39040 | 39.297 | 313 | 164 | 11 | 25 | 320 | 46 | 349 | 1.15e-54 | 182 |
| MS.gene91222.t1 | AT5G64100 | 37.538 | 333 | 171 | 12 | 10 | 317 | 7 | 327 | 1.28e-54 | 181 |
| MS.gene91222.t1 | AT5G64110 | 39.818 | 329 | 168 | 12 | 11 | 320 | 12 | 329 | 2.08e-54 | 181 |
| MS.gene91222.t1 | AT5G22410 | 34.884 | 301 | 175 | 9 | 29 | 318 | 32 | 322 | 2.68e-54 | 180 |
| MS.gene91222.t1 | AT4G17690 | 38.079 | 302 | 169 | 9 | 25 | 317 | 26 | 318 | 2.91e-54 | 180 |
| MS.gene91222.t1 | AT3G49960 | 36.842 | 323 | 184 | 10 | 8 | 317 | 10 | 325 | 5.91e-54 | 179 |
| MS.gene91222.t1 | AT4G37530 | 40.541 | 259 | 140 | 7 | 21 | 268 | 23 | 278 | 9.85e-54 | 177 |
| MS.gene91222.t1 | AT2G24800 | 35.484 | 310 | 178 | 7 | 23 | 320 | 29 | 328 | 2.47e-51 | 172 |
| MS.gene91222.t1 | AT2G43480 | 34.018 | 341 | 187 | 12 | 7 | 320 | 5 | 334 | 2.20e-50 | 170 |
| MS.gene91222.t1 | AT2G34060 | 36.337 | 344 | 184 | 14 | 3 | 318 | 7 | 343 | 4.53e-50 | 170 |
| MS.gene91222.t1 | AT4G31760 | 32.635 | 334 | 202 | 7 | 1 | 320 | 1 | 325 | 5.84e-50 | 169 |
| MS.gene91222.t1 | AT5G24070 | 35.922 | 309 | 172 | 11 | 25 | 318 | 35 | 332 | 9.19e-49 | 166 |
| MS.gene91222.t1 | AT4G21960 | 32.441 | 299 | 190 | 6 | 25 | 317 | 31 | 323 | 3.69e-45 | 157 |
| MS.gene91222.t1 | AT3G17070 | 31.845 | 336 | 204 | 10 | 3 | 320 | 10 | 338 | 5.31e-45 | 156 |
| MS.gene91222.t1 | AT2G37130 | 32.131 | 305 | 196 | 6 | 22 | 320 | 27 | 326 | 8.73e-45 | 155 |
| MS.gene91222.t1 | AT2G37130 | 32.107 | 299 | 192 | 6 | 28 | 320 | 2 | 295 | 2.29e-44 | 154 |
| MS.gene91222.t1 | AT4G25980 | 41.000 | 200 | 110 | 6 | 1 | 199 | 46 | 238 | 1.73e-37 | 135 |
| MS.gene91222.t1 | AT5G39580 | 40.580 | 207 | 110 | 8 | 10 | 215 | 9 | 203 | 1.19e-34 | 126 |
| MS.gene91222.t1 | AT3G17070 | 33.083 | 266 | 158 | 10 | 67 | 320 | 18 | 275 | 6.71e-34 | 125 |
| MS.gene91222.t1 | AT2G24800 | 41.520 | 171 | 93 | 3 | 23 | 193 | 29 | 192 | 1.42e-31 | 119 |
| MS.gene91222.t1 | AT4G32320 | 29.389 | 262 | 116 | 10 | 56 | 302 | 114 | 321 | 2.39e-14 | 73.2 |
| MS.gene91222.t1 | AT4G35000 | 27.083 | 288 | 142 | 11 | 37 | 303 | 2 | 242 | 2.93e-13 | 69.3 |
| MS.gene91222.t1 | AT4G35970 | 31.902 | 163 | 84 | 6 | 46 | 200 | 20 | 163 | 6.79e-12 | 64.7 |
| MS.gene91222.t1 | AT4G35970 | 31.902 | 163 | 84 | 6 | 46 | 200 | 20 | 163 | 1.14e-11 | 64.7 |
| MS.gene91222.t1 | AT3G42570 | 30.769 | 143 | 83 | 5 | 53 | 193 | 19 | 147 | 2.70e-11 | 61.2 |
Find 61 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGATCAACAATTGTTTA+AGG | 0.149991 | 5.1:-57456280 | MS.gene91222:CDS |
| CCTCTGATTGAATTAATATT+TGG | 0.153104 | 5.1:+57456980 | None:intergenic |
| AAAGACCTTGTAGCTCTTTC+TGG | 0.185151 | 5.1:-57456510 | MS.gene91222:CDS |
| TTGTTCTCCATGCAATTCTT+AGG | 0.198915 | 5.1:-57458200 | MS.gene91222:CDS |
| ATGGAGAACAACTGACTTTA+TGG | 0.223733 | 5.1:+57458212 | None:intergenic |
| TTGTTGTCTCCACCATTTCT+AGG | 0.241506 | 5.1:+57456384 | None:intergenic |
| TTTCTGGTGGTCACACTATA+GGG | 0.295800 | 5.1:-57456494 | MS.gene91222:CDS |
| CTTTCTGGTGGTCACACTAT+AGG | 0.303710 | 5.1:-57456495 | MS.gene91222:CDS |
| GGGAACATCAAGCCTCTTAC+TGG | 0.307586 | 5.1:-57456165 | MS.gene91222:CDS |
| TCTGATCAACAATTGTTTAA+GGG | 0.362650 | 5.1:-57456279 | MS.gene91222:CDS |
| TCGCCTTGTTTCCCAGTAAG+AGG | 0.368669 | 5.1:+57456153 | None:intergenic |
| TAAGACTTCTTTGATCAAGA+TGG | 0.398788 | 5.1:-57456187 | MS.gene91222:CDS |
| CTTAAAGATGCTGCAAAAGT+AGG | 0.404137 | 5.1:+57456417 | None:intergenic |
| ATAGAGATTTGCTATACAAA+AGG | 0.417509 | 5.1:-57456314 | MS.gene91222:CDS |
| AGGTAGTGAAAGTGACAAAT+TGG | 0.427397 | 5.1:-57456253 | MS.gene91222:CDS |
| TGTTCTCCATGCAATTCTTA+GGG | 0.432270 | 5.1:-57458199 | MS.gene91222:CDS |
| AGGAAGACTTGTCCTAGAAA+TGG | 0.434931 | 5.1:-57456396 | MS.gene91222:CDS |
| TAGAGATTTGCTATACAAAA+GGG | 0.436085 | 5.1:-57456313 | MS.gene91222:CDS |
| AAGACTTCTTTGATCAAGAT+GGG | 0.455664 | 5.1:-57456186 | MS.gene91222:CDS |
| AAATCTCTAGCAAAAGCTAA+AGG | 0.455926 | 5.1:+57456210 | None:intergenic |
| ACAATTGTTGATCAGAATGA+AGG | 0.465894 | 5.1:+57456286 | None:intergenic |
| AATCTCTAGCAAAAGCTAAA+GGG | 0.471645 | 5.1:+57456211 | None:intergenic |
| GATGATACCCCAAATTTCAC+TGG | 0.505975 | 5.1:-57457019 | MS.gene91222:CDS |
| TTATGGTGGGTAATGCTTGA+GGG | 0.514401 | 5.1:+57458229 | None:intergenic |
| CCAAATATTAATTCAATCAG+AGG | 0.523172 | 5.1:-57456980 | MS.gene91222:CDS |
| TTAAAGATGCTGCAAAAGTA+GGG | 0.540881 | 5.1:+57456418 | None:intergenic |
| CAACAATTGTTTAAGGGACA+AGG | 0.543449 | 5.1:-57456273 | MS.gene91222:CDS |
| ATTCTTAGGGAAAGACGCAT+TGG | 0.543690 | 5.1:-57458186 | MS.gene91222:CDS |
| GTCACACTATAGGGTTTGCT+AGG | 0.550006 | 5.1:-57456485 | MS.gene91222:CDS |
| TTTCTCCCCAGTGAAATTTG+GGG | 0.550604 | 5.1:+57457012 | None:intergenic |
| GAGTGAGCAATGCGTTGGTA+GGG | 0.551010 | 5.1:+57458274 | None:intergenic |
| AGCTGTGAGAAGTTGAATGT+TGG | 0.551695 | 5.1:+57456567 | None:intergenic |
| ATTTCAAATTTCAAATCACA+AGG | 0.563348 | 5.1:-57456543 | MS.gene91222:CDS |
| TACAGAATCACGAGCTGCTG+TGG | 0.565085 | 5.1:+57456877 | None:intergenic |
| GGAGTGAGCAATGCGTTGGT+AGG | 0.566755 | 5.1:+57458273 | None:intergenic |
| GGAACATCAAGCCTCTTACT+GGG | 0.568377 | 5.1:-57456164 | MS.gene91222:CDS |
| GAGAAGTTGAATGTTGGAGA+TGG | 0.571079 | 5.1:+57456573 | None:intergenic |
| TAGTGAAAGTGACAAATTGG+TGG | 0.589291 | 5.1:-57456250 | MS.gene91222:CDS |
| GACCTTGTAGCTCTTTCTGG+TGG | 0.589326 | 5.1:-57456507 | MS.gene91222:CDS |
| ATATCAGCGCAAGATACCAC+AGG | 0.590740 | 5.1:+57456905 | None:intergenic |
| ATGAGGAGTGAGCAATGCGT+TGG | 0.595481 | 5.1:+57458269 | None:intergenic |
| ATGATACCCCAAATTTCACT+GGG | 0.597994 | 5.1:-57457018 | MS.gene91222:CDS |
| AAGCCTCTTACTGGGAAACA+AGG | 0.600820 | 5.1:-57456156 | MS.gene91222:CDS |
| AAGACTTGTCCTAGAAATGG+TGG | 0.602280 | 5.1:-57456393 | MS.gene91222:CDS |
| TTTATGGTGGGTAATGCTTG+AGG | 0.608006 | 5.1:+57458228 | None:intergenic |
| AGATTCGACTCAATTGCAGA+AGG | 0.610654 | 5.1:-57456131 | MS.gene91222:CDS |
| AGTCATGAAAATGCAAGCGT+AGG | 0.616195 | 5.1:+57458154 | None:intergenic |
| GAGAACAACTGACTTTATGG+TGG | 0.617204 | 5.1:+57458215 | None:intergenic |
| ACAGTTGATAAAGTATGCAA+AGG | 0.617401 | 5.1:-57456929 | MS.gene91222:CDS |
| GTCTTTCCCTAAGAATTGCA+TGG | 0.620863 | 5.1:+57458193 | None:intergenic |
| CTTGTAGGAGTGAAATCAAG+TGG | 0.621819 | 5.1:+57456354 | None:intergenic |
| AGACTTCTTTGATCAAGATG+GGG | 0.622644 | 5.1:-57456185 | MS.gene91222:CDS |
| CAAACGCTATCATAGAAATG+AGG | 0.622833 | 5.1:+57458252 | None:intergenic |
| AGAGATTTGCTATACAAAAG+GGG | 0.637378 | 5.1:-57456312 | MS.gene91222:CDS |
| GATTCGACTCAATTGCAGAA+GGG | 0.642604 | 5.1:-57456130 | MS.gene91222:CDS |
| GACCACCAGAAAGAGCTACA+AGG | 0.644551 | 5.1:+57456505 | None:intergenic |
| AGAACAACTGACTTTATGGT+GGG | 0.649307 | 5.1:+57458216 | None:intergenic |
| TAAAGTATGCAAAGGCCCTG+TGG | 0.699533 | 5.1:-57456921 | MS.gene91222:CDS |
| ATGTGACTATAACAAGCACA+AGG | 0.702246 | 5.1:+57458304 | None:intergenic |
| TATCAGCGCAAGATACCACA+GGG | 0.715200 | 5.1:+57456906 | None:intergenic |
| TGATACCCCAAATTTCACTG+GGG | 0.801478 | 5.1:-57457017 | MS.gene91222:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTACTATTTTTTTATTTTGA+AGG | - | chr5.1:57456581-57456600 | MS.gene91222:CDS | 10.0% |
| !! | ATTTAAAAATAATGCACAAA+AGG | + | chr5.1:57457618-57457637 | None:intergenic | 15.0% |
| !!! | AATCTTAATTATTTTATGCT+GGG | - | chr5.1:57457004-57457023 | MS.gene91222:CDS | 15.0% |
| !!! | ACTTCATTTTAAAAATTGTA+TGG | + | chr5.1:57456903-57456922 | None:intergenic | 15.0% |
| !!! | ATATCAATGATTGAAATTTT+AGG | - | chr5.1:57457387-57457406 | MS.gene91222:intron | 15.0% |
| !!! | CTTCAAAATTATGATTTTTT+AGG | + | chr5.1:57456520-57456539 | None:intergenic | 15.0% |
| !!! | TACAATTTTTAAAATGAAGT+TGG | - | chr5.1:57456903-57456922 | MS.gene91222:CDS | 15.0% |
| !!! | TATCAATGATTGAAATTTTA+GGG | - | chr5.1:57457388-57457407 | MS.gene91222:intron | 15.0% |
| !!! | TTTGTATTTGAATTGATTTT+GGG | - | chr5.1:57456681-57456700 | MS.gene91222:intron | 15.0% |
| !!! | TTTTGTATTTGAATTGATTT+TGG | - | chr5.1:57456680-57456699 | MS.gene91222:intron | 15.0% |
| !! | AAGAAAATTATTGAAGCTAA+CGG | + | chr5.1:57457107-57457126 | None:intergenic | 20.0% |
| !! | ATTTCAAATTTCAAATCACA+AGG | - | chr5.1:57457909-57457928 | MS.gene91222:intron | 20.0% |
| !! | CTAAAATTATGTTTAGTCAA+AGG | + | chr5.1:57456643-57456662 | None:intergenic | 20.0% |
| !! | CTAATGTGTTACATATTTAA+AGG | + | chr5.1:57456403-57456422 | None:intergenic | 20.0% |
| !!! | ACTATAACGCTTTAAAATAA+AGG | + | chr5.1:57457718-57457737 | None:intergenic | 20.0% |
| !!! | ATGTTTGAAATTGTCAATTT+AGG | + | chr5.1:57456935-57456954 | None:intergenic | 20.0% |
| !!! | GAATCTTAATTATTTTATGC+TGG | - | chr5.1:57457003-57457022 | MS.gene91222:CDS | 20.0% |
| !!! | TTTAAAGCGTTATAGTTTTA+GGG | - | chr5.1:57457722-57457741 | MS.gene91222:intron | 20.0% |
| !!! | TTTTAAAGCGTTATAGTTTT+AGG | - | chr5.1:57457721-57457740 | MS.gene91222:intron | 20.0% |
| ! | AACTGTTAAAAGTGACAAAA+TGG | + | chr5.1:57457774-57457793 | None:intergenic | 25.0% |
| ! | ATGTTGTCTTACCTAATTAT+TGG | - | chr5.1:57457081-57457100 | MS.gene91222:intron | 25.0% |
| ! | CCAAATATTAATTCAATCAG+AGG | - | chr5.1:57457472-57457491 | MS.gene91222:intron | 25.0% |
| ! | CCTCTGATTGAATTAATATT+TGG | + | chr5.1:57457475-57457494 | None:intergenic | 25.0% |
| ! | TCTGATCAACAATTGTTTAA+GGG | - | chr5.1:57458173-57458192 | MS.gene91222:CDS | 25.0% |
| ! | TTCTGATCAACAATTGTTTA+AGG | - | chr5.1:57458172-57458191 | MS.gene91222:CDS | 25.0% |
| !! | ACTTAGACACAATCAATTTT+TGG | + | chr5.1:57457252-57457271 | None:intergenic | 25.0% |
| !! | ATTTTTCTACAATGTGCTAT+TGG | - | chr5.1:57457806-57457825 | MS.gene91222:intron | 25.0% |
| !! | TATGTATTTTCAACTCTTGT+AGG | + | chr5.1:57458116-57458135 | None:intergenic | 25.0% |
| !!! | ATAGAGATTTGCTATACAAA+AGG | - | chr5.1:57458138-57458157 | MS.gene91222:intron | 25.0% |
| !!! | ATTTTGTCACTTTTAACAGT+TGG | - | chr5.1:57457773-57457792 | MS.gene91222:intron | 25.0% |
| !!! | TAGAGATTTGCTATACAAAA+GGG | - | chr5.1:57458139-57458158 | MS.gene91222:intron | 25.0% |
| !!! | TATGTAACACATTAGCTTTA+TGG | - | chr5.1:57456408-57456427 | MS.gene91222:CDS | 25.0% |
| !!! | TTTTGTCACTTTTAACAGTT+GGG | - | chr5.1:57457774-57457793 | MS.gene91222:intron | 25.0% |
| !!! | TTTTTCTACAATGTGCTATT+GGG | - | chr5.1:57457807-57457826 | MS.gene91222:intron | 25.0% |
| AAATCTCTAGCAAAAGCTAA+AGG | + | chr5.1:57458245-57458264 | None:intergenic | 30.0% | |
| AAGACTTCTTTGATCAAGAT+GGG | - | chr5.1:57458266-57458285 | MS.gene91222:CDS | 30.0% | |
| AATCTCTAGCAAAAGCTAAA+GGG | + | chr5.1:57458244-57458263 | None:intergenic | 30.0% | |
| ACAATTGTTGATCAGAATGA+AGG | + | chr5.1:57458169-57458188 | None:intergenic | 30.0% | |
| ACGAATGTAACTAAATGCAT+TGG | - | chr5.1:57457646-57457665 | MS.gene91222:intron | 30.0% | |
| ACTAAAACCATCTTCAATGT+TGG | - | chr5.1:57456766-57456785 | MS.gene91222:intron | 30.0% | |
| AGCACATTGTAGAAAAATTG+TGG | + | chr5.1:57457804-57457823 | None:intergenic | 30.0% | |
| CTTAAAACCAACATTGAAGA+TGG | + | chr5.1:57456776-57456795 | None:intergenic | 30.0% | |
| TAAGACTTCTTTGATCAAGA+TGG | - | chr5.1:57458265-57458284 | MS.gene91222:CDS | 30.0% | |
| TGTGATTTGAATTTGCAATG+TGG | - | chr5.1:57457225-57457244 | MS.gene91222:intron | 30.0% | |
| TTAAAGATGCTGCAAAAGTA+GGG | + | chr5.1:57458037-57458056 | None:intergenic | 30.0% | |
| ! | ATTTTGTGTTTGACATGTGT+CGG | + | chr5.1:57457692-57457711 | None:intergenic | 30.0% |
| ! | GATTTTTCATATCAATGTGC+TGG | - | chr5.1:57456974-57456993 | MS.gene91222:CDS | 30.0% |
| ! | TAAATTTTGCTCCACTAGAA+GGG | - | chr5.1:57456824-57456843 | MS.gene91222:intron | 30.0% |
| ! | TTAAATTTTGCTCCACTAGA+AGG | - | chr5.1:57456823-57456842 | MS.gene91222:intron | 30.0% |
| !! | ACAGTTGATAAAGTATGCAA+AGG | - | chr5.1:57457523-57457542 | MS.gene91222:intron | 30.0% |
| !! | ACTCTTTAGTTTGAAACATG+AGG | + | chr5.1:57457188-57457207 | None:intergenic | 30.0% |
| !! | AGAGATTTGCTATACAAAAG+GGG | - | chr5.1:57458140-57458159 | MS.gene91222:intron | 30.0% |
| !!! | TTGAAATTTTAGGGTTGTGA+TGG | - | chr5.1:57457397-57457416 | MS.gene91222:intron | 30.0% |
| AAATTGTATGGATGACCCTT+AGG | + | chr5.1:57456891-57456910 | None:intergenic | 35.0% | |
| AATTGTATGGATGACCCTTA+GGG | + | chr5.1:57456890-57456909 | None:intergenic | 35.0% | |
| AGACTTCTTTGATCAAGATG+GGG | - | chr5.1:57458267-57458286 | MS.gene91222:CDS | 35.0% | |
| AGGTAGTGAAAGTGACAAAT+TGG | - | chr5.1:57458199-57458218 | MS.gene91222:CDS | 35.0% | |
| ATGATACCCCAAATTTCACT+GGG | - | chr5.1:57457434-57457453 | MS.gene91222:intron | 35.0% | |
| ATGTGACTATAACAAGCACA+AGG | + | chr5.1:57456151-57456170 | None:intergenic | 35.0% | |
| CAAACGCTATCATAGAAATG+AGG | + | chr5.1:57456203-57456222 | None:intergenic | 35.0% | |
| CAACAATTGTTTAAGGGACA+AGG | - | chr5.1:57458179-57458198 | MS.gene91222:CDS | 35.0% | |
| CTTAAAGATGCTGCAAAAGT+AGG | + | chr5.1:57458038-57458057 | None:intergenic | 35.0% | |
| TAGTACCATTTATGCATGCA+TGG | + | chr5.1:57456862-57456881 | None:intergenic | 35.0% | |
| TAGTGAAAGTGACAAATTGG+TGG | - | chr5.1:57458202-57458221 | MS.gene91222:CDS | 35.0% | |
| TGTTCTCCATGCAATTCTTA+GGG | - | chr5.1:57456253-57456272 | MS.gene91222:CDS | 35.0% | |
| TTGTTCTCCATGCAATTCTT+AGG | - | chr5.1:57456252-57456271 | MS.gene91222:CDS | 35.0% | |
| ! | AGAACAACTGACTTTATGGT+GGG | + | chr5.1:57456239-57456258 | None:intergenic | 35.0% |
| ! | ATGGAGAACAACTGACTTTA+TGG | + | chr5.1:57456243-57456262 | None:intergenic | 35.0% |
| ! | CAAAAGGTGTACACTTACTA+TGG | + | chr5.1:57457602-57457621 | None:intergenic | 35.0% |
| ! | GAAGTATTCTACAACATGCA+TGG | + | chr5.1:57456547-57456566 | None:intergenic | 35.0% |
| ! | TTTTCTCCCCAGTGAAATTT+GGG | + | chr5.1:57457444-57457463 | None:intergenic | 35.0% |
| !! | CTACTTTTGCAGCATCTTTA+AGG | - | chr5.1:57458036-57458055 | MS.gene91222:intron | 35.0% |
| !! | TAAATGCATTGGTGTCGTAT+TGG | - | chr5.1:57457657-57457676 | MS.gene91222:intron | 35.0% |
| AAAGACCTTGTAGCTCTTTC+TGG | - | chr5.1:57457942-57457961 | MS.gene91222:intron | 40.0% | |
| AAGACTTGTCCTAGAAATGG+TGG | - | chr5.1:57458059-57458078 | MS.gene91222:intron | 40.0% | |
| AATGGTACTAGAGTTCCCTA+AGG | - | chr5.1:57456872-57456891 | MS.gene91222:CDS | 40.0% | |
| AGATTCGACTCAATTGCAGA+AGG | - | chr5.1:57458321-57458340 | MS.gene91222:CDS | 40.0% | |
| AGCTGTGAGAAGTTGAATGT+TGG | + | chr5.1:57457888-57457907 | None:intergenic | 40.0% | |
| AGGAAGACTTGTCCTAGAAA+TGG | - | chr5.1:57458056-57458075 | MS.gene91222:intron | 40.0% | |
| AGTCATGAAAATGCAAGCGT+AGG | + | chr5.1:57456301-57456320 | None:intergenic | 40.0% | |
| ATGGTACTAGAGTTCCCTAA+GGG | - | chr5.1:57456873-57456892 | MS.gene91222:CDS | 40.0% | |
| ATTCTTAGGGAAAGACGCAT+TGG | - | chr5.1:57456266-57456285 | MS.gene91222:CDS | 40.0% | |
| CAAGTCAGATAAAACCACGA+CGG | + | chr5.1:57456454-57456473 | None:intergenic | 40.0% | |
| CTTGTAGGAGTGAAATCAAG+TGG | + | chr5.1:57458101-57458120 | None:intergenic | 40.0% | |
| GAAGCTAACGGCCAATAATT+AGG | + | chr5.1:57457095-57457114 | None:intergenic | 40.0% | |
| GAGAAGTTGAATGTTGGAGA+TGG | + | chr5.1:57457882-57457901 | None:intergenic | 40.0% | |
| GATCTCCATGCATGCATAAA+TGG | - | chr5.1:57456854-57456873 | MS.gene91222:intron | 40.0% | |
| GATGATACCCCAAATTTCAC+TGG | - | chr5.1:57457433-57457452 | MS.gene91222:intron | 40.0% | |
| GATTCGACTCAATTGCAGAA+GGG | - | chr5.1:57458322-57458341 | MS.gene91222:CDS | 40.0% | |
| GTCTTTCCCTAAGAATTGCA+TGG | + | chr5.1:57456262-57456281 | None:intergenic | 40.0% | |
| TGATACCCCAAATTTCACTG+GGG | - | chr5.1:57457435-57457454 | MS.gene91222:intron | 40.0% | |
| TTATGCATGCATGGAGATCA+TGG | + | chr5.1:57456853-57456872 | None:intergenic | 40.0% | |
| TTGTTGTCTCCACCATTTCT+AGG | + | chr5.1:57458071-57458090 | None:intergenic | 40.0% | |
| TTTCTCCCCAGTGAAATTTG+GGG | + | chr5.1:57457443-57457462 | None:intergenic | 40.0% | |
| ! | CATATCAATGTGCTGGTGAA+TGG | - | chr5.1:57456981-57457000 | MS.gene91222:CDS | 40.0% |
| ! | GAGAACAACTGACTTTATGG+TGG | + | chr5.1:57456240-57456259 | None:intergenic | 40.0% |
| ! | GTTTTCTCCCCAGTGAAATT+TGG | + | chr5.1:57457445-57457464 | None:intergenic | 40.0% |
| ! | TTTCTGGTGGTCACACTATA+GGG | - | chr5.1:57457958-57457977 | MS.gene91222:intron | 40.0% |
| !! | TTATGGTGGGTAATGCTTGA+GGG | + | chr5.1:57456226-57456245 | None:intergenic | 40.0% |
| !! | TTTATGGTGGGTAATGCTTG+AGG | + | chr5.1:57456227-57456246 | None:intergenic | 40.0% |
| !!! | CAATATTTTTTCGACCGTCG+TGG | - | chr5.1:57456437-57456456 | MS.gene91222:CDS | 40.0% |
| !!! | TGTCACTTTTAACAGTTGGG+AGG | - | chr5.1:57457777-57457796 | MS.gene91222:intron | 40.0% |
| AAGCCTCTTACTGGGAAACA+AGG | - | chr5.1:57458296-57458315 | MS.gene91222:CDS | 45.0% | |
| ATATCAGCGCAAGATACCAC+AGG | + | chr5.1:57457550-57457569 | None:intergenic | 45.0% | |
| GGAACATCAAGCCTCTTACT+GGG | - | chr5.1:57458288-57458307 | MS.gene91222:CDS | 45.0% | |
| TAAAGTATGCAAAGGCCCTG+TGG | - | chr5.1:57457531-57457550 | MS.gene91222:intron | 45.0% | |
| TATCAGCGCAAGATACCACA+GGG | + | chr5.1:57457549-57457568 | None:intergenic | 45.0% | |
| ! | CTTTCTGGTGGTCACACTAT+AGG | - | chr5.1:57457957-57457976 | MS.gene91222:intron | 45.0% |
| ! | GTCACACTATAGGGTTTGCT+AGG | - | chr5.1:57457967-57457986 | MS.gene91222:intron | 45.0% |
| ATGAGGAGTGAGCAATGCGT+TGG | + | chr5.1:57456186-57456205 | None:intergenic | 50.0% | |
| GACCACCAGAAAGAGCTACA+AGG | + | chr5.1:57457950-57457969 | None:intergenic | 50.0% | |
| GACCTTGTAGCTCTTTCTGG+TGG | - | chr5.1:57457945-57457964 | MS.gene91222:intron | 50.0% | |
| GATCATGGCAACCCTTCTAG+TGG | + | chr5.1:57456838-57456857 | None:intergenic | 50.0% | |
| GGGAACATCAAGCCTCTTAC+TGG | - | chr5.1:57458287-57458306 | MS.gene91222:CDS | 50.0% | |
| TACAGAATCACGAGCTGCTG+TGG | + | chr5.1:57457578-57457597 | None:intergenic | 50.0% | |
| ! | GAGTGAGCAATGCGTTGGTA+GGG | + | chr5.1:57456181-57456200 | None:intergenic | 50.0% |
| !! | TCGCCTTGTTTCCCAGTAAG+AGG | + | chr5.1:57458302-57458321 | None:intergenic | 50.0% |
| ! | GGAGTGAGCAATGCGTTGGT+AGG | + | chr5.1:57456182-57456201 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 57456122 | 57458352 | 57456122 | ID=MS.gene91222 |
| chr5.1 | mRNA | 57456122 | 57458352 | 57456122 | ID=MS.gene91222.t1;Parent=MS.gene91222 |
| chr5.1 | exon | 57458143 | 57458352 | 57458143 | ID=MS.gene91222.t1.exon1;Parent=MS.gene91222.t1 |
| chr5.1 | CDS | 57458143 | 57458352 | 57458143 | ID=cds.MS.gene91222.t1;Parent=MS.gene91222.t1 |
| chr5.1 | exon | 57456871 | 57457065 | 57456871 | ID=MS.gene91222.t1.exon2;Parent=MS.gene91222.t1 |
| chr5.1 | CDS | 57456871 | 57457065 | 57456871 | ID=cds.MS.gene91222.t1;Parent=MS.gene91222.t1 |
| chr5.1 | exon | 57456122 | 57456682 | 57456122 | ID=MS.gene91222.t1.exon3;Parent=MS.gene91222.t1 |
| chr5.1 | CDS | 57456122 | 57456682 | 57456122 | ID=cds.MS.gene91222.t1;Parent=MS.gene91222.t1 |
| Gene Sequence |
| Protein sequence |
