Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98635.t1 | XP_013455749.1 | 83.8 | 377 | 53 | 2 | 1 | 369 | 1 | 377 | 1.10E-93 | 353.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98635.t1 | Q9Y3A4 | 35.8 | 148 | 85 | 4 | 225 | 369 | 140 | 280 | 4.8e-13 | 77.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98635.t1 | A0A072UV85 | 83.8 | 377 | 53 | 2 | 1 | 369 | 1 | 377 | 8.0e-94 | 353.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene98635 | 0.836395 | 9.60E-57 | -1.69E-46 |
| MS.gene049501 | MS.gene98635 | 0.815448 | 9.20E-52 | -1.69E-46 |
| MS.gene049756 | MS.gene98635 | 0.807213 | 5.64E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene98635 | 0.816403 | 5.63E-52 | -1.69E-46 |
| MS.gene050721 | MS.gene98635 | 0.819198 | 1.32E-52 | -1.69E-46 |
| MS.gene050815 | MS.gene98635 | 0.812248 | 4.66E-51 | -1.69E-46 |
| MS.gene050844 | MS.gene98635 | 0.801247 | 9.85E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene98635 | 0.829124 | 6.13E-55 | -1.69E-46 |
| MS.gene051328 | MS.gene98635 | 0.805301 | 1.43E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene98635 | 0.819207 | 1.31E-52 | -1.69E-46 |
| MS.gene051757 | MS.gene98635 | 0.819805 | 9.58E-53 | -1.69E-46 |
| MS.gene05188 | MS.gene98635 | 0.817142 | 3.84E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene98635 | 0.808096 | 3.66E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene98635 | 0.81451 | 1.48E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene98635 | 0.806545 | 7.81E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene98635 | 0.817454 | 3.27E-52 | -1.69E-46 |
| MS.gene052947 | MS.gene98635 | 0.807197 | 5.69E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene98635 | 0.8255 | 4.53E-54 | -1.69E-46 |
| MS.gene053381 | MS.gene98635 | 0.817611 | 3.01E-52 | -1.69E-46 |
| MS.gene054472 | MS.gene98635 | 0.820315 | 7.32E-53 | -1.69E-46 |
| MS.gene054875 | MS.gene98635 | 0.804265 | 2.35E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene98635 | 0.807282 | 5.46E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene98635 | 0.801815 | 7.53E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene98635 | 0.803296 | 3.73E-49 | -1.69E-46 |
| MS.gene055466 | MS.gene98635 | 0.820799 | 5.67E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene98635 | 0.829127 | 6.12E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene98635 | 0.805258 | 1.46E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene98635 | 0.804499 | 2.10E-49 | -1.69E-46 |
| MS.gene056215 | MS.gene98635 | 0.814924 | 1.20E-51 | -1.69E-46 |
| MS.gene056595 | MS.gene98635 | 0.808757 | 2.65E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene98635 | 0.81597 | 7.04E-52 | -1.69E-46 |
| MS.gene057140 | MS.gene98635 | 0.818098 | 2.34E-52 | -1.69E-46 |
| MS.gene057360 | MS.gene98635 | 0.816704 | 4.82E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene98635 | 0.806443 | 8.21E-50 | -1.69E-46 |
| MS.gene058084 | MS.gene98635 | 0.806459 | 8.14E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene98635 | 0.816716 | 4.79E-52 | -1.69E-46 |
| MS.gene05897 | MS.gene98635 | 0.800472 | 1.42E-48 | -1.69E-46 |
| MS.gene059249 | MS.gene98635 | 0.806392 | 8.41E-50 | -1.69E-46 |
| MS.gene059283 | MS.gene98635 | 0.819319 | 1.24E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene98635 | 0.802901 | 4.50E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene98635 | 0.822729 | 2.03E-53 | -1.69E-46 |
| MS.gene06011 | MS.gene98635 | 0.815651 | 8.29E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene98635 | 0.816785 | 4.62E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene98635 | 0.803027 | 4.24E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene98635 | 0.80921 | 2.12E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98635.t1 | MTR_4g051625 | 90.186 | 377 | 29 | 2 | 1 | 369 | 1 | 377 | 0.0 | 646 |
| MS.gene98635.t1 | MTR_4g051625 | 78.378 | 370 | 41 | 4 | 1 | 369 | 1 | 332 | 0.0 | 535 |
| MS.gene98635.t1 | MTR_8g085800 | 75.806 | 372 | 49 | 6 | 1 | 369 | 1 | 334 | 0.0 | 529 |
| MS.gene98635.t1 | MTR_1g090650 | 82.803 | 157 | 27 | 0 | 213 | 369 | 32 | 188 | 9.47e-92 | 273 |
| MS.gene98635.t1 | MTR_8g085830 | 63.636 | 99 | 9 | 2 | 271 | 369 | 2 | 73 | 4.73e-32 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98635.t1 | AT5G38720 | 67.114 | 149 | 48 | 1 | 222 | 369 | 165 | 313 | 5.94e-71 | 224 |
| MS.gene98635.t1 | AT5G38720 | 67.114 | 149 | 48 | 1 | 222 | 369 | 158 | 306 | 6.73e-71 | 224 |
| MS.gene98635.t1 | AT5G38720 | 67.114 | 149 | 48 | 1 | 222 | 369 | 177 | 325 | 4.41e-70 | 223 |
Find 63 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTTATAATCTCCATTTC+AGG | 0.167824 | 4.2:-50597228 | None:intergenic |
| ATTAGAATCTCTGTGCTTCT+TGG | 0.245269 | 4.2:-50597496 | None:intergenic |
| GAAAGTAAGTAAGGGGAAAA+AGG | 0.255499 | 4.2:+50596395 | MS.gene98635:CDS |
| TCTAAATCAACTTCATCTTC+TGG | 0.321764 | 4.2:-50597321 | None:intergenic |
| TGTCCTTGTTCTTCCTTCTT+CGG | 0.356153 | 4.2:-50596530 | None:intergenic |
| GCAGCTTGTAAAGGGGAAAA+AGG | 0.361208 | 4.2:+50596491 | MS.gene98635:CDS |
| GACATTCATATTATTTCCTC+TGG | 0.367904 | 4.2:+50597704 | MS.gene98635:CDS |
| TCCTGAAATGGAGATTATAA+AGG | 0.379265 | 4.2:+50597227 | MS.gene98635:CDS |
| GTTGATTTAGAAGAGCAAAA+TGG | 0.379449 | 4.2:+50597051 | MS.gene98635:CDS |
| GTTGATTTAGAAGAGCAAAA+TGG | 0.379449 | 4.2:+50597333 | MS.gene98635:CDS |
| AGCTGCTCTAGAGAATAAAT+TGG | 0.384415 | 4.2:+50599999 | MS.gene98635:CDS |
| AAGCTACTACTAGTCGAAAA+AGG | 0.390121 | 4.2:+50597262 | MS.gene98635:CDS |
| AATAGAATGCAGCTTGTAAA+GGG | 0.394152 | 4.2:+50596483 | MS.gene98635:CDS |
| TGTTATGATGAAAGTAAGTA+AGG | 0.399345 | 4.2:+50596386 | None:intergenic |
| AGTAGCAACATCATTTAATA+AGG | 0.401324 | 4.2:-50600781 | None:intergenic |
| CCAACCCAGGTCTACTTTGA+TGG | 0.402517 | 4.2:-50598230 | None:intergenic |
| TGTTTCAGTTGATCCTGAAA+TGG | 0.433932 | 4.2:+50597215 | MS.gene98635:intron |
| AAAAGAGAAGCTCAGAGAAA+TGG | 0.446445 | 4.2:+50600069 | MS.gene98635:CDS |
| CCTGAAATGGAGATTATAAA+GGG | 0.447629 | 4.2:+50597228 | MS.gene98635:CDS |
| AGTTCTAAAATCACCAGAAA+AGG | 0.474585 | 4.2:+50597661 | MS.gene98635:CDS |
| AAGTGGGATTGCTGTGGGCT+CGG | 0.474663 | 4.2:+50599969 | MS.gene98635:CDS |
| AAAGGCAGAACAAAATCATC+AGG | 0.476614 | 4.2:+50597679 | MS.gene98635:CDS |
| GGAGATTATAAAGGGAAGAA+AGG | 0.484365 | 4.2:+50597236 | MS.gene98635:CDS |
| TAATAGAATGCAGCTTGTAA+AGG | 0.488478 | 4.2:+50596482 | MS.gene98635:CDS |
| GGAATTGCAGAGCAAATTTG+AGG | 0.494356 | 4.2:+50600711 | MS.gene98635:CDS |
| AGATAAGAAGAAAAGAAGAA+AGG | 0.498367 | 4.2:+50597637 | MS.gene98635:CDS |
| TCAAACTGCAGAGTGGATCA+TGG | 0.512454 | 4.2:+50598203 | MS.gene98635:intron |
| TGATCACGGGATGCAAGTTA+CGG | 0.516984 | 4.2:+50596939 | MS.gene98635:CDS |
| TGGTTGTTTCAGTTGATCAC+GGG | 0.517139 | 4.2:+50596926 | MS.gene98635:intron |
| CCATCAAAGTAGACCTGGGT+TGG | 0.520897 | 4.2:+50598230 | MS.gene98635:CDS |
| AAAACTACCGACTCTGAAAG+TGG | 0.527900 | 4.2:+50599952 | MS.gene98635:CDS |
| AATGATGTCAGATGGAATAG+TGG | 0.531547 | 4.2:+50597437 | MS.gene98635:intron |
| CTCTGAAAGTGGGATTGCTG+TGG | 0.532604 | 4.2:+50599963 | MS.gene98635:CDS |
| TCAAAGTAGACCTGGGTTGG+AGG | 0.539427 | 4.2:+50598233 | MS.gene98635:CDS |
| AAAGAAGCCCTTGCTGCAGA+AGG | 0.540425 | 4.2:+50599892 | MS.gene98635:CDS |
| GTTATGATGAAAGTAAGTAA+GGG | 0.547845 | 4.2:+50596387 | None:intergenic |
| TTGGTTGTTTCAGTTGATCA+CGG | 0.550128 | 4.2:+50596925 | MS.gene98635:intron |
| GGAGATGATGACTGCTCACA+TGG | 0.561999 | 4.2:+50597725 | MS.gene98635:CDS |
| GAATACCATCAAAGTAGACC+TGG | 0.568338 | 4.2:+50598225 | MS.gene98635:CDS |
| AGGCGAGAAGAAGAAAAGTA+AGG | 0.570130 | 4.2:+50596428 | MS.gene98635:CDS |
| TCTGAAAGTGGGATTGCTGT+GGG | 0.573818 | 4.2:+50599964 | MS.gene98635:CDS |
| AAGAAGCCCTTGCTGCAGAA+GGG | 0.579858 | 4.2:+50599893 | MS.gene98635:CDS |
| ACATAGTGATTCTAAAGAAG+AGG | 0.580245 | 4.2:+50597461 | MS.gene98635:CDS |
| TTATGATGAAAGTAAGTAAG+GGG | 0.583701 | 4.2:+50596388 | None:intergenic |
| AGAAGCCCTTGCTGCAGAAG+GGG | 0.584522 | 4.2:+50599894 | MS.gene98635:CDS |
| GTTGTTGTAGAAGAGCAAAA+TGG | 0.586388 | 4.2:+50596591 | MS.gene98635:CDS |
| AAGTTATTACTATCCGAAGA+AGG | 0.599313 | 4.2:+50596517 | MS.gene98635:CDS |
| GACGGTGGTTCAACACCACA+AGG | 0.613486 | 4.2:+50599921 | MS.gene98635:CDS |
| AAACTACCGACTCTGAAAGT+GGG | 0.614607 | 4.2:+50599953 | MS.gene98635:CDS |
| CACGGGATGCAAGTTACGGA+GGG | 0.615938 | 4.2:+50596943 | MS.gene98635:CDS |
| AGCAATCCCACTTTCAGAGT+CGG | 0.619196 | 4.2:-50599959 | None:intergenic |
| TGGTTCAACACCACAAGGGT+AGG | 0.619462 | 4.2:+50599926 | MS.gene98635:CDS |
| GAAGCCCTTGCTGCAGAAGG+GGG | 0.628790 | 4.2:+50599895 | MS.gene98635:CDS |
| CGAGAAGAAGAAAAGTAAGG+TGG | 0.629840 | 4.2:+50596431 | MS.gene98635:CDS |
| AAATGCTGAAGTTGAGACAG+TGG | 0.639592 | 4.2:+50596458 | MS.gene98635:CDS |
| TGCAGCAGTTGAGAGCTGCT+AGG | 0.640397 | 4.2:+50600749 | MS.gene98635:CDS |
| ATAGAATGCAGCTTGTAAAG+GGG | 0.647805 | 4.2:+50596484 | MS.gene98635:CDS |
| TCACGGGATGCAAGTTACGG+AGG | 0.659404 | 4.2:+50596942 | MS.gene98635:CDS |
| AATACCATCAAAGTAGACCT+GGG | 0.679517 | 4.2:+50598226 | MS.gene98635:CDS |
| TGAGCAGTCATCATCTCCAG+AGG | 0.681253 | 4.2:-50597720 | None:intergenic |
| TATCCGAAGAAGGAAGAACA+AGG | 0.684569 | 4.2:+50596527 | MS.gene98635:CDS |
| AGACTATTTAACTACATACG+AGG | 0.724184 | 4.2:+50598275 | MS.gene98635:CDS |
| ACGGTGGTTCAACACCACAA+GGG | 0.755501 | 4.2:+50599922 | MS.gene98635:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAGTTTATGAATTATTA+GGG | + | chr4.2:50600336-50600355 | MS.gene98635:intron | 10.0% |
| !! | AAAAAGAAAAATAAAGAAGT+TGG | + | chr4.2:50600024-50600043 | MS.gene98635:CDS | 15.0% |
| !! | AAATCATAAACATGTTAATT+AGG | + | chr4.2:50600242-50600261 | MS.gene98635:intron | 15.0% |
| !! | AATCATAAACATGTTAATTA+GGG | + | chr4.2:50600243-50600262 | MS.gene98635:intron | 15.0% |
| !! | TGTATATTTATTGTTATACA+TGG | + | chr4.2:50598108-50598127 | MS.gene98635:intron | 15.0% |
| !!! | AACTTCTTTATTTTTCTTTT+TGG | - | chr4.2:50600025-50600044 | None:intergenic | 15.0% |
| !!! | CTTTTAGTTTATGAATTATT+AGG | + | chr4.2:50600335-50600354 | MS.gene98635:intron | 15.0% |
| !!! | GTTGGAAAATATTTTATTTA+GGG | + | chr4.2:50598490-50598509 | MS.gene98635:intron | 15.0% |
| !!! | TGTTGGAAAATATTTTATTT+AGG | + | chr4.2:50598489-50598508 | MS.gene98635:intron | 15.0% |
| !! | AAGAATAATGGTAAACAATA+TGG | - | chr4.2:50598038-50598057 | None:intergenic | 20.0% |
| !! | AATGAATCCTTTATACTATT+AGG | - | chr4.2:50600401-50600420 | None:intergenic | 20.0% |
| !! | ATCAAAATAAGGAACAAATA+TGG | - | chr4.2:50599830-50599849 | None:intergenic | 20.0% |
| !! | ATCATAAACATGTTAATTAG+GGG | + | chr4.2:50600244-50600263 | MS.gene98635:intron | 20.0% |
| !! | ATCATAGAAACAAAGATATT+AGG | - | chr4.2:50600451-50600470 | None:intergenic | 20.0% |
| !! | TATACATATACATACAGTAA+TGG | + | chr4.2:50597925-50597944 | MS.gene98635:intron | 20.0% |
| !! | TATTGTGAATAATAATTTCG+TGG | - | chr4.2:50596662-50596681 | None:intergenic | 20.0% |
| !! | TCAAAATAAGGAACAAATAT+GGG | - | chr4.2:50599829-50599848 | None:intergenic | 20.0% |
| !! | TCATAGAAACAAAGATATTA+GGG | - | chr4.2:50600450-50600469 | None:intergenic | 20.0% |
| !!! | AATGTGTTATGTTTTTGTAT+TGG | + | chr4.2:50597156-50597175 | MS.gene98635:intron | 20.0% |
| !!! | AATTATATAGCTTTTGACTT+GGG | + | chr4.2:50598175-50598194 | MS.gene98635:intron | 20.0% |
| !!! | AATTTTAATTTAATGGCAGA+AGG | - | chr4.2:50600481-50600500 | None:intergenic | 20.0% |
| !!! | ATTTCCATGCAATTATTTTT+TGG | + | chr4.2:50599848-50599867 | MS.gene98635:intron | 20.0% |
| !!! | ATTTTAATTTAATGGCAGAA+GGG | - | chr4.2:50600480-50600499 | None:intergenic | 20.0% |
| !!! | CTTTTACAAGTTATTTTTCA+AGG | - | chr4.2:50598546-50598565 | None:intergenic | 20.0% |
| !!! | GAATTTTCTCTGAAATAAAT+CGG | + | chr4.2:50597191-50597210 | MS.gene98635:intron | 20.0% |
| !!! | TAATTATATAGCTTTTGACT+TGG | + | chr4.2:50598174-50598193 | MS.gene98635:intron | 20.0% |
| !!! | TGCGTAGAATTTTAATTTAA+TGG | - | chr4.2:50600488-50600507 | None:intergenic | 20.0% |
| ! | AAACAGAGAAAAATTCTATG+AGG | - | chr4.2:50597599-50597618 | None:intergenic | 25.0% |
| ! | AACCTTATACAACTATAACT+TGG | - | chr4.2:50598604-50598623 | None:intergenic | 25.0% |
| ! | AATTCTGCGAAGAAAAAAAA+AGG | - | chr4.2:50597768-50597787 | None:intergenic | 25.0% |
| ! | AGATAAGAAGAAAAGAAGAA+AGG | + | chr4.2:50597637-50597656 | MS.gene98635:CDS | 25.0% |
| ! | ATCCAAGTTATAGTTGTATA+AGG | + | chr4.2:50598599-50598618 | MS.gene98635:intron | 25.0% |
| ! | ATTGCATGGAAATCAAAATA+AGG | - | chr4.2:50599841-50599860 | None:intergenic | 25.0% |
| ! | GAAAAATTCTATGAGGAAAA+TGG | - | chr4.2:50597592-50597611 | None:intergenic | 25.0% |
| ! | GAGAGTAATTGATAGAAATA+TGG | + | chr4.2:50598956-50598975 | MS.gene98635:intron | 25.0% |
| ! | TACATTGGAACAATTTACAA+TGG | + | chr4.2:50597895-50597914 | MS.gene98635:intron | 25.0% |
| ! | TATTCACAATATCTTGAAGT+CGG | + | chr4.2:50596671-50596690 | MS.gene98635:intron | 25.0% |
| ! | TCATAAACATGTTAATTAGG+GGG | + | chr4.2:50600245-50600264 | MS.gene98635:intron | 25.0% |
| ! | TCGCAGAATTACTTTATATT+TGG | + | chr4.2:50597778-50597797 | MS.gene98635:intron | 25.0% |
| ! | TCGCTGTATAATAAAATTCA+TGG | - | chr4.2:50598458-50598477 | None:intergenic | 25.0% |
| ! | TGAAACAACCAATTCATATA+GGG | - | chr4.2:50596917-50596936 | None:intergenic | 25.0% |
| ! | TGACCTAGGATATAAAAATA+TGG | - | chr4.2:50600121-50600140 | None:intergenic | 25.0% |
| ! | TTGACCAAAAAATAATTGCA+TGG | - | chr4.2:50599855-50599874 | None:intergenic | 25.0% |
| !! | AGAATTTTTCTCTGTTTTGT+AGG | + | chr4.2:50597602-50597621 | MS.gene98635:intron | 25.0% |
| !! | TATTTCTCTGTATTTTCTCT+TGG | + | chr4.2:50599374-50599393 | MS.gene98635:intron | 25.0% |
| !! | TCGTGACATTTAGTATTTTT+CGG | + | chr4.2:50596804-50596823 | MS.gene98635:intron | 25.0% |
| !!! | AAAGTCATTTTTCATACATC+TGG | + | chr4.2:50598562-50598581 | MS.gene98635:intron | 25.0% |
| !!! | AAGTCATTTTTCATACATCT+GGG | + | chr4.2:50598563-50598582 | MS.gene98635:intron | 25.0% |
| !!! | AATTATTTTTTGGTCAATGC+AGG | + | chr4.2:50599858-50599877 | MS.gene98635:intron | 25.0% |
| !!! | TGTCCTTGTTTTTCTTTTTT+CGG | - | chr4.2:50596993-50597012 | None:intergenic | 25.0% |
| !!! | TTGCCATATTTTTATATCCT+AGG | + | chr4.2:50600115-50600134 | MS.gene98635:intron | 25.0% |
| AAAGTAAGTAAGGGGAAAAA+GGG | + | chr4.2:50596396-50596415 | MS.gene98635:CDS | 30.0% | |
| AAATGGTGAGTTAATGATAG+TGG | + | chr4.2:50596608-50596627 | MS.gene98635:intron | 30.0% | |
| AACAAGGACAAAAATCTAGT+TGG | + | chr4.2:50597003-50597022 | MS.gene98635:CDS | 30.0% | |
| AACAGTAATGCATAATCATG+AGG | + | chr4.2:50599020-50599039 | MS.gene98635:intron | 30.0% | |
| AACTACATACGAGGAAAAAT+TGG | + | chr4.2:50598284-50598303 | MS.gene98635:CDS | 30.0% | |
| AAGCGAGAAATATCACAAAT+AGG | - | chr4.2:50600427-50600446 | None:intergenic | 30.0% | |
| AAGTTATTACTATCCGAAGA+AGG | + | chr4.2:50596517-50596536 | MS.gene98635:CDS | 30.0% | |
| AATAGAATGCAGCTTGTAAA+GGG | + | chr4.2:50596483-50596502 | MS.gene98635:CDS | 30.0% | |
| ACAGTAATGCATAATCATGA+GGG | + | chr4.2:50599021-50599040 | MS.gene98635:intron | 30.0% | |
| ACATTCCACAATGATAGATA+AGG | + | chr4.2:50599190-50599209 | MS.gene98635:intron | 30.0% | |
| AGACTATTTAACTACATACG+AGG | + | chr4.2:50598275-50598294 | MS.gene98635:CDS | 30.0% | |
| AGCGAGAAATATCACAAATA+GGG | - | chr4.2:50600426-50600445 | None:intergenic | 30.0% | |
| AGGGTTATCTGACTATAATT+AGG | - | chr4.2:50598410-50598429 | None:intergenic | 30.0% | |
| ATAAACATGTTAATTAGGGG+GGG | + | chr4.2:50600247-50600266 | MS.gene98635:intron | 30.0% | |
| CAGCGAAATTAAATTGATGT+TGG | + | chr4.2:50598472-50598491 | MS.gene98635:intron | 30.0% | |
| CATAAACATGTTAATTAGGG+GGG | + | chr4.2:50600246-50600265 | MS.gene98635:intron | 30.0% | |
| CATTACTGTTCTGTAATCAA+GGG | - | chr4.2:50599010-50599029 | None:intergenic | 30.0% | |
| CCTGAAATGGAGATTATAAA+GGG | + | chr4.2:50597228-50597247 | MS.gene98635:CDS | 30.0% | |
| CTGAAACAACCAATTCATAT+AGG | - | chr4.2:50596918-50596937 | None:intergenic | 30.0% | |
| GAACATTTCCCTATATGAAT+TGG | + | chr4.2:50596906-50596925 | MS.gene98635:intron | 30.0% | |
| GACATTCATATTATTTCCTC+TGG | + | chr4.2:50597704-50597723 | MS.gene98635:CDS | 30.0% | |
| GAGTGAATTCATAGATAACT+TGG | + | chr4.2:50599441-50599460 | MS.gene98635:intron | 30.0% | |
| GTGAGATGAGAGATTATAAA+GGG | - | chr4.2:50599735-50599754 | None:intergenic | 30.0% | |
| TAAACAATATGGTCACTCTT+AGG | - | chr4.2:50598027-50598046 | None:intergenic | 30.0% | |
| TAAATTTAAACCAACGACGT+TGG | + | chr4.2:50600203-50600222 | MS.gene98635:intron | 30.0% | |
| TAATAGAATGCAGCTTGTAA+AGG | + | chr4.2:50596482-50596501 | MS.gene98635:CDS | 30.0% | |
| TAGTCGAAAAAGGAAAAACA+AGG | + | chr4.2:50597272-50597291 | MS.gene98635:CDS | 30.0% | |
| TATTAAAATGATATGCACGC+AGG | - | chr4.2:50598826-50598845 | None:intergenic | 30.0% | |
| TCATAGCTGTAAATTGAACA+TGG | - | chr4.2:50599801-50599820 | None:intergenic | 30.0% | |
| TCCTGAAATGGAGATTATAA+AGG | + | chr4.2:50597227-50597246 | MS.gene98635:CDS | 30.0% | |
| TCTAAATCAACTTCATCTTC+TGG | - | chr4.2:50597324-50597343 | None:intergenic | 30.0% | |
| TCTTAAAGCAAAACAGAAGT+CGG | + | chr4.2:50598332-50598351 | MS.gene98635:intron | 30.0% | |
| TGAGAAAGTTAGAAGAAACA+AGG | - | chr4.2:50599071-50599090 | None:intergenic | 30.0% | |
| TGCTAGACCTAATAGTATAA+AGG | + | chr4.2:50600391-50600410 | MS.gene98635:intron | 30.0% | |
| TGGTAATCATGTATCAAGAT+TGG | - | chr4.2:50599218-50599237 | None:intergenic | 30.0% | |
| TGTGAGATGAGAGATTATAA+AGG | - | chr4.2:50599736-50599755 | None:intergenic | 30.0% | |
| TTGTAATAAACTGCACTTTC+TGG | + | chr4.2:50597539-50597558 | MS.gene98635:intron | 30.0% | |
| ! | ACATAGTGATTCTAAAGAAG+AGG | + | chr4.2:50597461-50597480 | MS.gene98635:CDS | 30.0% |
| ! | AGAAACTCAAAAAGCACATA+AGG | - | chr4.2:50598857-50598876 | None:intergenic | 30.0% |
| ! | AGAAAGTGCAGTTTATTACA+AGG | - | chr4.2:50597540-50597559 | None:intergenic | 30.0% |
| ! | ATCTGTCATTTCAGTTACAA+TGG | - | chr4.2:50599503-50599522 | None:intergenic | 30.0% |
| ! | GAATGTTTTCAGCAAATAGA+AGG | - | chr4.2:50599176-50599195 | None:intergenic | 30.0% |
| ! | GATTTCTTTAGAGACATCAA+TGG | - | chr4.2:50599350-50599369 | None:intergenic | 30.0% |
| ! | GTTGATTTAGAAGAGCAAAA+TGG | + | chr4.2:50597051-50597070 | MS.gene98635:CDS | 30.0% |
| ! | TTTTTCTCTGTTTTGTAGGT+AGG | + | chr4.2:50597606-50597625 | MS.gene98635:intron | 30.0% |
| !! | AGTTCTAAAATCACCAGAAA+AGG | + | chr4.2:50597661-50597680 | MS.gene98635:CDS | 30.0% |
| !! | GGTTTTGATGAGTAAGAATA+AGG | + | chr4.2:50598977-50598996 | MS.gene98635:intron | 30.0% |
| !! | TTAAATTTGGTGTTAGGATG+TGG | + | chr4.2:50598711-50598730 | MS.gene98635:intron | 30.0% |
| !!! | ATGTGCTTTTTGAGTTTCTT+TGG | + | chr4.2:50598858-50598877 | MS.gene98635:intron | 30.0% |
| !!! | GGTTAGTTTTACATGTACAT+TGG | + | chr4.2:50597880-50597899 | MS.gene98635:intron | 30.0% |
| AAAAGAGAAGCTCAGAGAAA+TGG | + | chr4.2:50600069-50600088 | MS.gene98635:CDS | 35.0% | |
| AAAGGCAGAACAAAATCATC+AGG | + | chr4.2:50597679-50597698 | MS.gene98635:CDS | 35.0% | |
| AAATAGAAGGAGAACGTTTC+GGG | - | chr4.2:50599163-50599182 | None:intergenic | 35.0% | |
| AACAAGGACAAAAATCTAGC+TGG | + | chr4.2:50596543-50596562 | MS.gene98635:CDS | 35.0% | |
| AACACTAGCAGTAATGTTTC+TGG | + | chr4.2:50600512-50600531 | MS.gene98635:intron | 35.0% | |
| AAGCTACTACTAGTCGAAAA+AGG | + | chr4.2:50597262-50597281 | MS.gene98635:CDS | 35.0% | |
| AATACCATCAAAGTAGACCT+GGG | + | chr4.2:50598226-50598245 | MS.gene98635:CDS | 35.0% | |
| AATGATGTCAGATGGAATAG+TGG | + | chr4.2:50597437-50597456 | MS.gene98635:intron | 35.0% | |
| ACAAATATGCACAAAGCACA+CGG | - | chr4.2:50598091-50598110 | None:intergenic | 35.0% | |
| ACCTTTCTCTTCCTTAAGTT+GGG | + | chr4.2:50599637-50599656 | MS.gene98635:intron | 35.0% | |
| ATACAGATGAGAGCCAATAA+TGG | + | chr4.2:50599240-50599259 | MS.gene98635:intron | 35.0% | |
| ATACGAGGAAAAATTGGAAG+AGG | + | chr4.2:50598290-50598309 | MS.gene98635:CDS | 35.0% | |
| ATAGAATGCAGCTTGTAAAG+GGG | + | chr4.2:50596484-50596503 | MS.gene98635:CDS | 35.0% | |
| ATGCCAAACCAATTGCATTA+AGG | + | chr4.2:50596746-50596765 | MS.gene98635:intron | 35.0% | |
| ATGCCTTAATGCAATTGGTT+TGG | - | chr4.2:50596752-50596771 | None:intergenic | 35.0% | |
| ATTAGAATCTCTGTGCTTCT+TGG | - | chr4.2:50597499-50597518 | None:intergenic | 35.0% | |
| CAAATAGAAGGAGAACGTTT+CGG | - | chr4.2:50599164-50599183 | None:intergenic | 35.0% | |
| CAGCATAGTTACATATTGTG+AGG | + | chr4.2:50597859-50597878 | MS.gene98635:intron | 35.0% | |
| CAGCCGAAAAAAGAAAAACA+AGG | + | chr4.2:50596987-50597006 | MS.gene98635:CDS | 35.0% | |
| CATCTATATTTGCACCAACA+TGG | + | chr4.2:50600280-50600299 | MS.gene98635:intron | 35.0% | |
| CATGTTGGTGCAAATATAGA+TGG | - | chr4.2:50600282-50600301 | None:intergenic | 35.0% | |
| CATTTCAGTTACAATGGTCA+AGG | - | chr4.2:50599497-50599516 | None:intergenic | 35.0% | |
| CCCTTTATAATCTCCATTTC+AGG | - | chr4.2:50597231-50597250 | None:intergenic | 35.0% | |
| CTGACATCATTGAGGAAAAA+AGG | - | chr4.2:50597428-50597447 | None:intergenic | 35.0% | |
| GAAAGTAAGTAAGGGGAAAA+AGG | + | chr4.2:50596395-50596414 | MS.gene98635:CDS | 35.0% | |
| GAAATGACAAACCCAACTTA+AGG | - | chr4.2:50599651-50599670 | None:intergenic | 35.0% | |
| GCATTACTGTTCTGTAATCA+AGG | - | chr4.2:50599011-50599030 | None:intergenic | 35.0% | |
| GGAGATTATAAAGGGAAGAA+AGG | + | chr4.2:50597236-50597255 | MS.gene98635:CDS | 35.0% | |
| GTTGTTGTAGAAGAGCAAAA+TGG | + | chr4.2:50596591-50596610 | MS.gene98635:CDS | 35.0% | |
| TAGAAGAAACAAGGCATGTT+GGG | - | chr4.2:50599062-50599081 | None:intergenic | 35.0% | |
| TATGGCAAAGTGAGTTAGTT+TGG | - | chr4.2:50599761-50599780 | None:intergenic | 35.0% | |
| TATTATCCCCCCTGATAAAA+GGG | - | chr4.2:50598429-50598448 | None:intergenic | 35.0% | |
| TATTCCATCTGACATCATTG+AGG | - | chr4.2:50597436-50597455 | None:intergenic | 35.0% | |
| TGCTGTCTTAAACTAGTACA+TGG | + | chr4.2:50600618-50600637 | MS.gene98635:intron | 35.0% | |
| TGGAACCTTATCTATCATTG+TGG | - | chr4.2:50599198-50599217 | None:intergenic | 35.0% | |
| TGTTTCAGTTGATCCTGAAA+TGG | + | chr4.2:50597215-50597234 | MS.gene98635:intron | 35.0% | |
| TTAGAAGAAACAAGGCATGT+TGG | - | chr4.2:50599063-50599082 | None:intergenic | 35.0% | |
| TTATTATCCCCCCTGATAAA+AGG | - | chr4.2:50598430-50598449 | None:intergenic | 35.0% | |
| ! | ACAGAGCTTTTCTGTTTATG+GGG | + | chr4.2:50598673-50598692 | MS.gene98635:intron | 35.0% |
| ! | AGTCAGATAACCCTTTTATC+AGG | + | chr4.2:50598416-50598435 | MS.gene98635:intron | 35.0% |
| ! | ATGGCAAAGTGAGTTAGTTT+GGG | - | chr4.2:50599760-50599779 | None:intergenic | 35.0% |
| ! | GACAGAGCTTTTCTGTTTAT+GGG | + | chr4.2:50598672-50598691 | MS.gene98635:intron | 35.0% |
| ! | GTCAGATAACCCTTTTATCA+GGG | + | chr4.2:50598417-50598436 | MS.gene98635:intron | 35.0% |
| ! | TCAGATAACCCTTTTATCAG+GGG | + | chr4.2:50598418-50598437 | MS.gene98635:intron | 35.0% |
| ! | TGACAGAGCTTTTCTGTTTA+TGG | + | chr4.2:50598671-50598690 | MS.gene98635:intron | 35.0% |
| ! | TGATTTTGTTCTGCCTTTTC+TGG | - | chr4.2:50597677-50597696 | None:intergenic | 35.0% |
| ! | TGGTAGTTGGTGCTTAAATT+TGG | + | chr4.2:50598698-50598717 | MS.gene98635:intron | 35.0% |
| ! | TTGGTTGTTTCAGTTGATCA+CGG | + | chr4.2:50596925-50596944 | MS.gene98635:intron | 35.0% |
| ! | TTTTCCTCAATGATGTCAGA+TGG | + | chr4.2:50597429-50597448 | MS.gene98635:intron | 35.0% |
| !! | AGAAAGGTGTTAGAACTTTG+AGG | - | chr4.2:50599625-50599644 | None:intergenic | 35.0% |
| !! | AGCTGCTCTAGAGAATAAAT+TGG | + | chr4.2:50599999-50600018 | MS.gene98635:CDS | 35.0% |
| !! | GAAAGGTGTTAGAACTTTGA+GGG | - | chr4.2:50599624-50599643 | None:intergenic | 35.0% |
| !! | GACGTTGGTGGTTTAAATAA+AGG | + | chr4.2:50600218-50600237 | MS.gene98635:intron | 35.0% |
| !! | TGGTGCTTAAATTTGGTGTT+AGG | + | chr4.2:50598705-50598724 | MS.gene98635:intron | 35.0% |
| !! | TTGTATACCGACTAGTTCTA+TGG | + | chr4.2:50598520-50598539 | MS.gene98635:intron | 35.0% |
| !! | TTTTGACTCGTGAACATTGA+AGG | - | chr4.2:50599286-50599305 | None:intergenic | 35.0% |
| !!! | CTTGTTTTTCTTTTTTCGGC+TGG | - | chr4.2:50596989-50597008 | None:intergenic | 35.0% |
| !!! | GAGCTTCTCTTTTTTGAAAG+CGG | - | chr4.2:50600062-50600081 | None:intergenic | 35.0% |
| !!! | TTTTTGAGTTTCTTTGGCCT+AGG | + | chr4.2:50598864-50598883 | MS.gene98635:intron | 35.0% |
| AAATGCTGAAGTTGAGACAG+TGG | + | chr4.2:50596458-50596477 | MS.gene98635:CDS | 40.0% | |
| AAGGAGGAATAGGTCTCTAT+TGG | - | chr4.2:50599575-50599594 | None:intergenic | 40.0% | |
| ACCCAACTTAAGGAAGAGAA+AGG | - | chr4.2:50599641-50599660 | None:intergenic | 40.0% | |
| AGGAGGAATAGGTCTCTATT+GGG | - | chr4.2:50599574-50599593 | None:intergenic | 40.0% | |
| AGGCGAGAAGAAGAAAAGTA+AGG | + | chr4.2:50596428-50596447 | MS.gene98635:CDS | 40.0% | |
| ATCACAGAACTCACAAAAGC+CGG | - | chr4.2:50596775-50596794 | None:intergenic | 40.0% | |
| ATTTAAACCAACGACGTTGG+TGG | + | chr4.2:50600206-50600225 | MS.gene98635:intron | 40.0% | |
| ATTTAAACCACCAACGTCGT+TGG | - | chr4.2:50600216-50600235 | None:intergenic | 40.0% | |
| CAAAACGACAGATAGCTGAA+TGG | + | chr4.2:50599301-50599320 | MS.gene98635:intron | 40.0% | |
| CACCACAATCCAATAGTCAA+CGG | - | chr4.2:50598065-50598084 | None:intergenic | 40.0% | |
| CACCTTTCTCTTCCTTAAGT+TGG | + | chr4.2:50599636-50599655 | MS.gene98635:intron | 40.0% | |
| CGAGAAGAAGAAAAGTAAGG+TGG | + | chr4.2:50596431-50596450 | MS.gene98635:CDS | 40.0% | |
| CTAAAAGATCTGCTCCATGT+TGG | - | chr4.2:50600297-50600316 | None:intergenic | 40.0% | |
| CTCTGCAAGCAAAACATGAA+TGG | - | chr4.2:50600686-50600705 | None:intergenic | 40.0% | |
| CTGAAATGACAGATCCAAAG+TGG | + | chr4.2:50599509-50599528 | MS.gene98635:intron | 40.0% | |
| GAAACAGCTAGAAATGACCT+AGG | - | chr4.2:50600135-50600154 | None:intergenic | 40.0% | |
| GAACATGGAACGTTAAACAC+TGG | - | chr4.2:50599786-50599805 | None:intergenic | 40.0% | |
| GAACGTTAAACACTGGAGTA+TGG | - | chr4.2:50599779-50599798 | None:intergenic | 40.0% | |
| GAATACCATCAAAGTAGACC+TGG | + | chr4.2:50598225-50598244 | MS.gene98635:CDS | 40.0% | |
| GGAATTGCAGAGCAAATTTG+AGG | + | chr4.2:50600711-50600730 | MS.gene98635:CDS | 40.0% | |
| GGTGTTTCACAATACGACAA+TGG | - | chr4.2:50597571-50597590 | None:intergenic | 40.0% | |
| GTATGAGAAGTGAAGCTTGA+AGG | - | chr4.2:50599594-50599613 | None:intergenic | 40.0% | |
| GTCAACGGTCGAAAGAATAA+TGG | - | chr4.2:50598050-50598069 | None:intergenic | 40.0% | |
| TATCCGAAGAAGGAAGAACA+AGG | + | chr4.2:50596527-50596546 | MS.gene98635:CDS | 40.0% | |
| TCGTGAACATTGAAGGTCTT+TGG | - | chr4.2:50599279-50599298 | None:intergenic | 40.0% | |
| TGTCCTTGTTCTTCCTTCTT+CGG | - | chr4.2:50596533-50596552 | None:intergenic | 40.0% | |
| TGTTTATGGGGTATGGTAGT+TGG | + | chr4.2:50598685-50598704 | MS.gene98635:intron | 40.0% | |
| TTCAAGGCCATAGAACTAGT+CGG | - | chr4.2:50598530-50598549 | None:intergenic | 40.0% | |
| TTGGTATCCATCAGAACTGT+TGG | - | chr4.2:50599130-50599149 | None:intergenic | 40.0% | |
| ! | ACCAATTGCATTAAGGCATC+CGG | + | chr4.2:50596753-50596772 | MS.gene98635:intron | 40.0% |
| ! | AGAGCAAAATGGTGAGTTGA+TGG | + | chr4.2:50597062-50597081 | MS.gene98635:intron | 40.0% |
| ! | AGATAACCCTTTTATCAGGG+GGG | + | chr4.2:50598420-50598439 | MS.gene98635:intron | 40.0% |
| ! | ATTGGCTCTCATCTGTATCT+TGG | - | chr4.2:50599238-50599257 | None:intergenic | 40.0% |
| ! | CAGATAACCCTTTTATCAGG+GGG | + | chr4.2:50598419-50598438 | MS.gene98635:intron | 40.0% |
| ! | GCTTTTCTGTTTATGGGGTA+TGG | + | chr4.2:50598678-50598697 | MS.gene98635:intron | 40.0% |
| ! | TAGTTTTCTTCCTACCCTTG+TGG | - | chr4.2:50599939-50599958 | None:intergenic | 40.0% |
| ! | TGGCAAAGTGAGTTAGTTTG+GGG | - | chr4.2:50599759-50599778 | None:intergenic | 40.0% |
| ! | TGGTTGTTTCAGTTGATCAC+GGG | + | chr4.2:50596926-50596945 | MS.gene98635:intron | 40.0% |
| ! | TGTTTTGCTTGCAGAGCTAA+TGG | + | chr4.2:50600690-50600709 | MS.gene98635:intron | 40.0% |
| ! | TTCTTTCGACCGTTGACTAT+TGG | + | chr4.2:50598053-50598072 | MS.gene98635:intron | 40.0% |
| !! | AAAACTACCGACTCTGAAAG+TGG | + | chr4.2:50599952-50599971 | MS.gene98635:CDS | 40.0% |
| !! | AAACTACCGACTCTGAAAGT+GGG | + | chr4.2:50599953-50599972 | MS.gene98635:CDS | 40.0% |
| !! | AAATGGTGAGTTGATGACAG+TGG | + | chr4.2:50597068-50597087 | MS.gene98635:intron | 40.0% |
| !! | AATTTGGTGTTAGGATGTGG+AGG | + | chr4.2:50598714-50598733 | MS.gene98635:intron | 40.0% |
| !! | ATTATAAAGGGCGTTGTCGT+GGG | - | chr4.2:50599723-50599742 | None:intergenic | 40.0% |
| !! | GTGAGTTAATGATAGTGGTG+TGG | + | chr4.2:50596613-50596632 | MS.gene98635:intron | 40.0% |
| !! | GTGAGTTGATGGTTATGATG+TGG | + | chr4.2:50597355-50597374 | MS.gene98635:intron | 40.0% |
| AACATGTTAATTAGGGGGGG+TGG | + | chr4.2:50600250-50600269 | MS.gene98635:intron | 45.0% | |
| AAGTCACTTCTATGCTGCCT+AGG | - | chr4.2:50598884-50598903 | None:intergenic | 45.0% | |
| AATGATCGCCATCTTGTTGC+TGG | + | chr4.2:50600545-50600564 | MS.gene98635:intron | 45.0% | |
| ACATCGTGTGTATGGCTATG+CGG | - | chr4.2:50596716-50596735 | None:intergenic | 45.0% | |
| AGCAATCCCACTTTCAGAGT+CGG | - | chr4.2:50599962-50599981 | None:intergenic | 45.0% | |
| AGCCACGGAACAAACATCAA+GGG | + | chr4.2:50599542-50599561 | MS.gene98635:intron | 45.0% | |
| AGTAGGGTGGATGTTGGAAA+AGG | - | chr4.2:50598003-50598022 | None:intergenic | 45.0% | |
| AGTGGTTACCTAATGAGCCA+CGG | + | chr4.2:50599527-50599546 | MS.gene98635:intron | 45.0% | |
| ATATTCTTCAGCACCCTAGC+AGG | + | chr4.2:50599678-50599697 | MS.gene98635:intron | 45.0% | |
| ATCCATCAGAACTGTTGGTC+AGG | - | chr4.2:50599125-50599144 | None:intergenic | 45.0% | |
| ATGGTCACTCTTAGGCAGTA+GGG | - | chr4.2:50598019-50598038 | None:intergenic | 45.0% | |
| CGTTTCGGGAGACTATTGAT+TGG | - | chr4.2:50599149-50599168 | None:intergenic | 45.0% | |
| GAAACAAGGCATGTTGGGTA+AGG | - | chr4.2:50599057-50599076 | None:intergenic | 45.0% | |
| GCAAGTTACGGAGGGAAAAA+AGG | + | chr4.2:50596951-50596970 | MS.gene98635:CDS | 45.0% | |
| GCAGCTTGTAAAGGGGAAAA+AGG | + | chr4.2:50596491-50596510 | MS.gene98635:CDS | 45.0% | |
| GGAATACTCAAACTGCAGAG+TGG | + | chr4.2:50598196-50598215 | MS.gene98635:intron | 45.0% | |
| GGCTCATTAGGTAACCACTT+TGG | - | chr4.2:50599526-50599545 | None:intergenic | 45.0% | |
| GTGAAGCTTGAAGGAGGAAT+AGG | - | chr4.2:50599585-50599604 | None:intergenic | 45.0% | |
| TACAATGGTCAAGGTTCTCG+TGG | - | chr4.2:50599488-50599507 | None:intergenic | 45.0% | |
| TAGCCATACACACGATGTGT+CGG | + | chr4.2:50596718-50596737 | MS.gene98635:intron | 45.0% | |
| TATGGTCACTCTTAGGCAGT+AGG | - | chr4.2:50598020-50598039 | None:intergenic | 45.0% | |
| TCAAACTGCAGAGTGGATCA+TGG | + | chr4.2:50598203-50598222 | MS.gene98635:intron | 45.0% | |
| TCTGAAAGTGGGATTGCTGT+GGG | + | chr4.2:50599964-50599983 | MS.gene98635:CDS | 45.0% | |
| TGAGAAGTGAAGCTTGAAGG+AGG | - | chr4.2:50599591-50599610 | None:intergenic | 45.0% | |
| TGATCACGGGATGCAAGTTA+CGG | + | chr4.2:50596939-50596958 | MS.gene98635:CDS | 45.0% | |
| TGTTTGTTCCGTGGCTCATT+AGG | - | chr4.2:50599538-50599557 | None:intergenic | 45.0% | |
| TTCCCTTGATGTTTGTTCCG+TGG | - | chr4.2:50599547-50599566 | None:intergenic | 45.0% | |
| ! | AAGGTGTTCCAGCAACAAGA+TGG | - | chr4.2:50600556-50600575 | None:intergenic | 45.0% |
| ! | GACCGTTGACTATTGGATTG+TGG | + | chr4.2:50598060-50598079 | MS.gene98635:intron | 45.0% |
| !! | GATTATAAAGGGCGTTGTCG+TGG | - | chr4.2:50599724-50599743 | None:intergenic | 45.0% |
| !! | ATAAAATCATATAATTTATA+AGG | - | chr4.2:50600575-50600594 | None:intergenic | 5.0% |
| AAAGAAGCCCTTGCTGCAGA+AGG | + | chr4.2:50599892-50599911 | MS.gene98635:CDS | 50.0% | |
| AACCCACCAGAGGCCATTAT+TGG | - | chr4.2:50599256-50599275 | None:intergenic | 50.0% | |
| AAGAAGCCCTTGCTGCAGAA+GGG | + | chr4.2:50599893-50599912 | MS.gene98635:CDS | 50.0% | |
| ACAAGGCATGTTGGGTAAGG+AGG | - | chr4.2:50599054-50599073 | None:intergenic | 50.0% | |
| ACGGTGGTTCAACACCACAA+GGG | + | chr4.2:50599922-50599941 | MS.gene98635:CDS | 50.0% | |
| AGCCAATAATGGCCTCTGGT+GGG | + | chr4.2:50599251-50599270 | MS.gene98635:intron | 50.0% | |
| ATGTTAATTAGGGGGGGTGG+CGG | + | chr4.2:50600253-50600272 | MS.gene98635:intron | 50.0% | |
| CAACCGACACATCGTGTGTA+TGG | - | chr4.2:50596724-50596743 | None:intergenic | 50.0% | |
| CACGCAGGATACTGAGTCAA+TGG | - | chr4.2:50598811-50598830 | None:intergenic | 50.0% | |
| CATCGTGTGTATGGCTATGC+GGG | - | chr4.2:50596715-50596734 | None:intergenic | 50.0% | |
| CCAACCCAGGTCTACTTTGA+TGG | - | chr4.2:50598233-50598252 | None:intergenic | 50.0% | |
| CCATCAAAGTAGACCTGGGT+TGG | + | chr4.2:50598230-50598249 | MS.gene98635:CDS | 50.0% | |
| GAGCCACGGAACAAACATCA+AGG | + | chr4.2:50599541-50599560 | MS.gene98635:intron | 50.0% | |
| GCCGGATGCCTTAATGCAAT+TGG | - | chr4.2:50596757-50596776 | None:intergenic | 50.0% | |
| GGAGATGATGACTGCTCACA+TGG | + | chr4.2:50597725-50597744 | MS.gene98635:CDS | 50.0% | |
| GTCGGAAACCACCAAGTAGT+CGG | + | chr4.2:50596689-50596708 | MS.gene98635:intron | 50.0% | |
| TGAGAGCCAATAATGGCCTC+TGG | + | chr4.2:50599247-50599266 | MS.gene98635:intron | 50.0% | |
| TGAGCAGTCATCATCTCCAG+AGG | - | chr4.2:50597723-50597742 | None:intergenic | 50.0% | |
| TGGTTCAACACCACAAGGGT+AGG | + | chr4.2:50599926-50599945 | MS.gene98635:CDS | 50.0% | |
| TTAGGCAGTAGGGTGGATGT+TGG | - | chr4.2:50598009-50598028 | None:intergenic | 50.0% | |
| ! | CTCTGAAAGTGGGATTGCTG+TGG | + | chr4.2:50599963-50599982 | MS.gene98635:CDS | 50.0% |
| ! | GGGAAAAAGGGCATACGAAC+AGG | + | chr4.2:50596408-50596427 | MS.gene98635:CDS | 50.0% |
| ! | GTCCTGACCAACAGTTCTGA+TGG | + | chr4.2:50599120-50599139 | MS.gene98635:intron | 50.0% |
| ! | TCAAAGTAGACCTGGGTTGG+AGG | + | chr4.2:50598233-50598252 | MS.gene98635:CDS | 50.0% |
| ! | TTTTGCAACACCTCCAACCC+AGG | - | chr4.2:50598246-50598265 | None:intergenic | 50.0% |
| AAGTGGGATTGCTGTGGGCT+CGG | + | chr4.2:50599969-50599988 | MS.gene98635:CDS | 55.0% | |
| ACTAGGCCTTTCGTCCTGCT+AGG | - | chr4.2:50599695-50599714 | None:intergenic | 55.0% | |
| AGAACTGTTGGTCAGGACGC+AGG | - | chr4.2:50599118-50599137 | None:intergenic | 55.0% | |
| AGAAGCCCTTGCTGCAGAAG+GGG | + | chr4.2:50599894-50599913 | MS.gene98635:CDS | 55.0% | |
| CACGGGATGCAAGTTACGGA+GGG | + | chr4.2:50596943-50596962 | MS.gene98635:CDS | 55.0% | |
| CGCCATTGTTGCTGCAGCAA+TGG | - | chr4.2:50599400-50599419 | None:intergenic | 55.0% | |
| CTAGGCCTTTCGTCCTGCTA+GGG | - | chr4.2:50599694-50599713 | None:intergenic | 55.0% | |
| GACGGTGGTTCAACACCACA+AGG | + | chr4.2:50599921-50599940 | MS.gene98635:CDS | 55.0% | |
| GAGCCAATAATGGCCTCTGG+TGG | + | chr4.2:50599250-50599269 | MS.gene98635:intron | 55.0% | |
| GGCCATTGCTGCAGCAACAA+TGG | + | chr4.2:50599395-50599414 | MS.gene98635:intron | 55.0% | |
| GGCGCACATGTTTCAGCAAG+TGG | + | chr4.2:50599416-50599435 | MS.gene98635:intron | 55.0% | |
| GTCACTCTTAGGCAGTAGGG+TGG | - | chr4.2:50598016-50598035 | None:intergenic | 55.0% | |
| TCACGGGATGCAAGTTACGG+AGG | + | chr4.2:50596942-50596961 | MS.gene98635:CDS | 55.0% | |
| TGCAGCAGTTGAGAGCTGCT+AGG | + | chr4.2:50600749-50600768 | MS.gene98635:CDS | 55.0% | |
| TGTTAATTAGGGGGGGTGGC+GGG | + | chr4.2:50600254-50600273 | MS.gene98635:intron | 55.0% | |
| !! | AGGTCTTTGGAACCCACCAG+AGG | - | chr4.2:50599266-50599285 | None:intergenic | 55.0% |
| !! | CGTTGTCGTGGGAGAGTACT+AGG | - | chr4.2:50599712-50599731 | None:intergenic | 55.0% |
| !! | GTGAGTTGATGACAGTGGCG+TGG | + | chr4.2:50597073-50597092 | MS.gene98635:intron | 55.0% |
| CAGCACCCTAGCAGGACGAA+AGG | + | chr4.2:50599686-50599705 | MS.gene98635:intron | 60.0% | |
| CCATCCCCCTTCTGCAGCAA+GGG | - | chr4.2:50599902-50599921 | None:intergenic | 60.0% | |
| GAAGCCCTTGCTGCAGAAGG+GGG | + | chr4.2:50599895-50599914 | MS.gene98635:CDS | 60.0% | |
| TATGCGGGCCGACTACTTGG+TGG | - | chr4.2:50596700-50596719 | None:intergenic | 60.0% | |
| TCCATCCCCCTTCTGCAGCA+AGG | - | chr4.2:50599903-50599922 | None:intergenic | 60.0% | |
| TGCTGCAGAAGGGGGATGGA+CGG | + | chr4.2:50599903-50599922 | MS.gene98635:CDS | 60.0% | |
| CCCTTGCTGCAGAAGGGGGA+TGG | + | chr4.2:50599899-50599918 | MS.gene98635:CDS | 65.0% | |
| GGCTATGCGGGCCGACTACT+TGG | - | chr4.2:50596703-50596722 | None:intergenic | 65.0% | |
| TGCAGAAGGGGGATGGACGG+TGG | + | chr4.2:50599906-50599925 | MS.gene98635:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 50596390 | 50600789 | 50596390 | ID=MS.gene98635 |
| chr4.2 | mRNA | 50596390 | 50600789 | 50596390 | ID=MS.gene98635.t1;Parent=MS.gene98635 |
| chr4.2 | exon | 50596390 | 50596612 | 50596390 | ID=MS.gene98635.t1.exon1;Parent=MS.gene98635.t1 |
| chr4.2 | CDS | 50596390 | 50596612 | 50596390 | ID=cds.MS.gene98635.t1;Parent=MS.gene98635.t1 |
| chr4.2 | exon | 50596938 | 50597072 | 50596938 | ID=MS.gene98635.t1.exon2;Parent=MS.gene98635.t1 |
| chr4.2 | CDS | 50596938 | 50597072 | 50596938 | ID=cds.MS.gene98635.t1;Parent=MS.gene98635.t1 |
| chr4.2 | exon | 50597223 | 50597354 | 50597223 | ID=MS.gene98635.t1.exon3;Parent=MS.gene98635.t1 |
| chr4.2 | CDS | 50597223 | 50597354 | 50597223 | ID=cds.MS.gene98635.t1;Parent=MS.gene98635.t1 |
| chr4.2 | exon | 50597448 | 50597540 | 50597448 | ID=MS.gene98635.t1.exon4;Parent=MS.gene98635.t1 |
| chr4.2 | CDS | 50597448 | 50597540 | 50597448 | ID=cds.MS.gene98635.t1;Parent=MS.gene98635.t1 |
| chr4.2 | exon | 50597624 | 50597755 | 50597624 | ID=MS.gene98635.t1.exon5;Parent=MS.gene98635.t1 |
| chr4.2 | CDS | 50597624 | 50597755 | 50597624 | ID=cds.MS.gene98635.t1;Parent=MS.gene98635.t1 |
| chr4.2 | exon | 50598214 | 50598311 | 50598214 | ID=MS.gene98635.t1.exon6;Parent=MS.gene98635.t1 |
| chr4.2 | CDS | 50598214 | 50598311 | 50598214 | ID=cds.MS.gene98635.t1;Parent=MS.gene98635.t1 |
| chr4.2 | exon | 50599880 | 50600090 | 50599880 | ID=MS.gene98635.t1.exon7;Parent=MS.gene98635.t1 |
| chr4.2 | CDS | 50599880 | 50600090 | 50599880 | ID=cds.MS.gene98635.t1;Parent=MS.gene98635.t1 |
| chr4.2 | exon | 50600704 | 50600789 | 50600704 | ID=MS.gene98635.t1.exon8;Parent=MS.gene98635.t1 |
| chr4.2 | CDS | 50600704 | 50600789 | 50600704 | ID=cds.MS.gene98635.t1;Parent=MS.gene98635.t1 |
| Gene Sequence |
| Protein sequence |
