AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000264.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000264.01.T01 MTR_1g019500 87.467 375 13 1 39 379 418 792 0.0 672
MsG0180000264.01.T01 MTR_1g019500 87.467 375 13 1 39 379 534 908 0.0 671
MsG0180000264.01.T01 MTR_1g019510 77.099 131 22 3 345 475 138 260 1.69e-58 202
MsG0180000264.01.T01 MTR_1g019510 76.852 108 19 2 461 567 368 470 2.69e-41 155
MsG0180000264.01.T01 MTR_1g019520 73.148 108 23 2 461 567 117 219 4.48e-44 156
MsG0180000264.01.T01 MTR_8g009073 70.642 109 29 2 369 475 26 133 1.77e-41 153
MsG0180000264.01.T01 MTR_8g009073 60.000 105 36 2 461 564 240 339 5.86e-29 118
MsG0180000264.01.T01 MTR_8g009063 63.710 124 36 4 354 475 153 269 2.02e-41 156
MsG0180000264.01.T01 MTR_8g009063 63.889 108 33 2 461 567 378 480 1.91e-33 133
MsG0180000264.01.T01 MTR_8g009073 70.642 109 29 2 369 475 155 262 1.84e-40 153
MsG0180000264.01.T01 MTR_8g009073 60.000 105 36 2 461 564 369 468 1.06e-28 119
MsG0180000264.01.T01 MTR_8g009067 60.902 133 43 4 345 475 19 144 2.48e-38 144
MsG0180000264.01.T01 MTR_8g009067 57.692 104 38 2 461 563 251 349 9.10e-28 115
MsG0180000264.01.T01 MTR_8g008970 65.041 123 34 4 355 475 147 262 7.60e-38 149
MsG0180000264.01.T01 MTR_8g008970 63.889 108 33 2 461 567 693 795 7.62e-33 134
MsG0180000264.01.T01 MTR_8g008970 71.605 81 23 0 483 563 387 467 1.01e-27 118
MsG0180000264.01.T01 MTR_8g008970 65.333 75 24 1 403 475 527 601 3.26e-22 101
MsG0180000264.01.T01 MTR_8g009067 64.228 123 35 4 355 475 147 262 2.67e-37 144
MsG0180000264.01.T01 MTR_8g009067 57.692 104 38 2 461 563 369 467 1.80e-27 116
MsG0180000264.01.T01 MTR_8g008990 55.224 134 51 4 344 475 136 262 1.16e-36 142
MsG0180000264.01.T01 MTR_8g008990 68.571 105 27 2 461 564 373 472 3.74e-34 135
MsG0180000264.01.T01 MTR_8g009055 40.291 206 98 5 272 475 80 262 1.75e-36 142
MsG0180000264.01.T01 MTR_8g009055 64.762 105 31 2 461 564 371 470 2.96e-31 127
MsG0180000264.01.T01 MTR_8g009050 39.698 199 95 5 279 475 87 262 6.18e-34 135
MsG0180000264.01.T01 MTR_8g009050 66.667 105 29 2 461 564 371 470 3.70e-33 132
MsG0180000264.01.T01 MTR_8g009840 62.037 108 33 3 461 567 432 532 3.81e-29 121
MsG0180000264.01.T01 MTR_0184s0040 45.324 139 62 5 340 473 147 276 1.10e-23 104
MsG0180000264.01.T01 MTR_0184s0040 48.077 104 48 2 461 563 385 483 3.10e-20 94.4
MsG0180000264.01.T01 MTR_0078s0190 45.324 139 62 5 340 473 147 276 1.10e-23 104
MsG0180000264.01.T01 MTR_0078s0190 48.077 104 48 2 461 563 385 483 3.10e-20 94.4
MsG0180000264.01.T01 MTR_7g117170 52.427 103 43 2 461 562 380 477 4.06e-22 100
MsG0180000264.01.T01 MTR_7g117170 35.811 148 73 4 329 474 143 270 2.57e-20 94.7
MsG0180000264.01.T01 MTR_7g047030 43.066 137 65 5 344 473 131 261 5.94e-22 99.4
MsG0180000264.01.T01 MTR_7g047030 39.860 143 65 4 431 557 326 463 2.21e-15 79.3
MsG0180000264.01.T01 MTR_7g047270 43.066 137 65 5 344 473 131 261 5.94e-22 99.4
MsG0180000264.01.T01 MTR_7g047270 39.860 143 65 4 431 557 326 463 2.21e-15 79.3
MsG0180000264.01.T01 MTR_8g027885 49.074 108 49 2 461 567 377 479 1.23e-21 98.6
MsG0180000264.01.T01 MTR_8g027885 40.566 106 54 4 373 475 169 268 7.43e-15 77.8
MsG0180000264.01.T01 MTR_0078s0010 45.588 136 57 6 347 473 134 261 1.38e-21 98.6
MsG0180000264.01.T01 MTR_0078s0010 38.926 149 70 4 431 563 326 469 1.77e-16 82.8
MsG0180000264.01.T01 MTR_8g027870 49.074 108 49 2 461 567 377 479 1.38e-21 98.6
MsG0180000264.01.T01 MTR_8g027870 36.496 137 78 4 342 475 138 268 1.01e-17 86.7
MsG0180000264.01.T01 MTR_8g006270 43.089 123 61 3 355 475 144 259 4.25e-21 97.1
MsG0180000264.01.T01 MTR_8g006270 42.574 101 50 4 465 563 372 466 1.81e-14 76.3
MsG0180000264.01.T01 MTR_0078s0060 47.368 114 52 3 362 473 153 260 4.75e-21 96.7
MsG0180000264.01.T01 MTR_0078s0060 37.762 143 68 4 431 557 325 462 1.11e-14 77.0
MsG0180000264.01.T01 MTR_6g005600 52.041 98 41 2 461 557 372 464 7.57e-21 96.3
MsG0180000264.01.T01 MTR_6g005600 33.023 215 108 8 313 508 115 312 8.56e-20 92.8
MsG0180000264.01.T01 MTR_0078s0200 46.789 109 50 3 369 473 158 262 2.25e-19 89.7
MsG0180000264.01.T01 MTR_0184s0010 48.750 80 41 0 484 563 18 97 5.26e-19 82.8
MsG0180000264.01.T01 MTR_6g005660 45.361 97 51 2 375 470 162 257 9.63e-19 86.7
MsG0180000264.01.T01 MTR_0184s0030 46.789 109 50 3 369 473 158 262 1.07e-18 89.7
MsG0180000264.01.T01 MTR_0184s0030 43.421 76 43 0 483 558 390 465 8.40e-13 71.2
MsG0180000264.01.T01 MTR_8g077590 47.619 105 50 4 373 474 162 264 1.47e-17 85.9
MsG0180000264.01.T01 MTR_8g077590 42.857 98 50 2 461 557 371 463 1.00e-12 70.9
MsG0180000264.01.T01 MTR_8g006260 39.231 130 62 5 350 474 148 265 1.25e-16 83.2
MsG0180000264.01.T01 MTR_8g006260 39.423 104 57 2 461 563 374 472 7.72e-14 74.3
MsG0180000264.01.T01 MTR_8g012650 44.762 105 52 2 461 564 376 475 5.23e-16 81.3
MsG0180000264.01.T01 MTR_8g012650 41.284 109 59 4 373 477 160 267 2.73e-12 69.7
MsG0180000264.01.T01 MTR_7g046490 40.385 104 56 2 461 563 368 466 6.21e-16 80.9
MsG0180000264.01.T01 MTR_7g046490 41.748 103 58 2 373 475 159 259 9.60e-16 80.5
MsG0180000264.01.T01 MTR_8g012630 58.209 67 28 0 483 549 338 404 3.38e-15 78.2
MsG0180000264.01.T01 MTR_6g488280 42.718 103 52 3 461 561 368 465 5.55e-15 77.8
MsG0180000264.01.T01 MTR_0428s0010 42.718 103 52 3 461 561 368 465 5.55e-15 77.8
MsG0180000264.01.T01 MTR_8g012635 42.857 98 50 2 461 557 376 468 1.85e-14 76.3
MsG0180000264.01.T01 MTR_8g012745 45.192 104 50 3 461 563 374 471 3.47e-14 75.5
MsG0180000264.01.T01 MTR_8g012745 41.441 111 56 5 373 477 160 267 4.29e-14 75.1
MsG0180000264.01.T01 MTR_6g023665 40.777 103 54 3 461 561 375 472 6.90e-14 74.7
MsG0180000264.01.T01 MTR_8g012730 53.030 66 31 0 483 548 231 296 2.66e-13 71.6
MsG0180000264.01.T01 MTR_8g006230 38.017 121 67 4 355 474 90 203 3.33e-13 70.9
MsG0180000264.01.T01 MTR_8g006730 40.000 105 56 3 461 563 370 469 3.84e-13 72.0
MsG0180000264.01.T01 MTR_6g005640 64.444 45 16 0 484 528 1 45 7.82e-13 64.3
MsG0180000264.01.T01 MTR_8g465670 34.783 115 66 3 373 482 162 272 1.76e-12 70.1
MsG0180000264.01.T01 MTR_8g006710 38.095 105 58 3 461 563 369 468 1.94e-12 70.1
MsG0180000264.01.T01 MTR_8g006220 33.913 115 67 3 373 482 161 271 4.21e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000264.01.T01 AT2G05170 68.901 373 83 3 39 379 515 886 1.73e-175 521
MsG0180000264.01.T01 AT1G01390 36.774 155 76 4 322 474 129 263 1.44e-22 101
MsG0180000264.01.T01 AT1G01390 36.774 155 76 4 322 474 146 280 1.46e-22 101
MsG0180000264.01.T01 AT1G01420 36.774 155 76 4 322 474 129 263 3.23e-22 100
MsG0180000264.01.T01 AT1G01420 34.314 102 60 3 461 561 372 467 4.22e-12 68.9
MsG0180000264.01.T01 AT1G01420 36.774 155 76 4 322 474 132 266 3.23e-22 100
MsG0180000264.01.T01 AT1G01420 34.314 102 60 3 461 561 375 470 4.14e-12 68.9
MsG0180000264.01.T01 AT4G01070 44.231 104 55 2 373 474 161 263 4.97e-22 98.2
MsG0180000264.01.T01 AT4G01070 44.231 104 55 2 373 474 161 263 9.97e-22 99.0
MsG0180000264.01.T01 AT4G01070 44.118 102 51 2 461 561 372 468 1.02e-18 89.7

Find 160 sgRNAs with CRISPR-Local

Find 617 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGAAACCTTCGCAATTT+TGG 0.145749 1:-3523999 MsG0180000264.01.T01:five_prime_UTR
TTGGCCTCAGTCCCACTTTA+AGG 0.219861 1:+3515639 None:intergenic
CAGAGTTTGAAGGACAATTA+TGG 0.226264 1:+3520693 None:intergenic
TCTGAGGTTCTGAGAAAATA+TGG 0.241148 1:-3521932 MsG0180000264.01.T01:five_prime_UTR
AGCACACATGTGGAGAAATT+TGG 0.250729 1:-3515447 MsG0180000264.01.T01:CDS
TTCTGTTCTTGTTTGGATAA+TGG 0.251680 1:+3516104 None:intergenic
TCTGTTCTTGTTTGGATAAT+GGG 0.257612 1:+3516105 None:intergenic
CTTATGTGATACAAAAGTTT+TGG 0.283961 1:-3521832 MsG0180000264.01.T01:CDS
ATAGAAGCACTAACAGAAAA+AGG 0.288826 1:-3516159 MsG0180000264.01.T01:CDS
TCTAAGACAGACCTATATTC+TGG 0.301900 1:+3517910 None:intergenic
AGACTGGGTGATTCAGTTAA+AGG 0.309604 1:-3520832 MsG0180000264.01.T01:CDS
CAGCAATAGTTCCATTGGTT+TGG 0.314895 1:+3521106 None:intergenic
TACCAGATTCTGTTCTTGTT+TGG 0.323350 1:+3516097 None:intergenic
CATCTTGTTTCTTCTTCCTC+TGG 0.332774 1:+3523865 None:intergenic
GTTTGGATAATGGGTCCAAT+AGG 0.335802 1:+3516114 None:intergenic
AGCAATAGTTCCATTGGTTT+GGG 0.348338 1:+3521107 None:intergenic
GGAGTAAGAATTTGTAAGAT+TGG 0.354332 1:+3516253 None:intergenic
AAGGAGGGGATCCATCTCTT+TGG 0.360728 1:-3520813 MsG0180000264.01.T01:CDS
AGAGTTTGAAGGACAATTAT+GGG 0.373061 1:+3520694 None:intergenic
CCGAGTGTGCCCCAGAATAT+AGG 0.376144 1:-3517921 MsG0180000264.01.T01:intron
AGAACAGAATCTGGTAATAA+TGG 0.376423 1:-3516090 MsG0180000264.01.T01:CDS
CCTCACACTTTCAGTGATCA+AGG 0.379854 1:-3520656 MsG0180000264.01.T01:CDS
CTCAAATATTTCGGTGAGCT+TGG 0.382396 1:-3520781 MsG0180000264.01.T01:CDS
CTACAACCTCACAAATTACT+TGG 0.388960 1:-3521796 MsG0180000264.01.T01:CDS
GGAAGGGGTAAAGTTGTAAC+TGG 0.392960 1:-3523786 MsG0180000264.01.T01:five_prime_UTR
CTACTACCTGGTGCTTGAAT+AGG 0.394940 1:+3516327 None:intergenic
TGGCTTGATCTATCTTGAGC+TGG 0.396777 1:+3516273 None:intergenic
TGAAAAGATGAAACTCTATA+AGG 0.401719 1:-3520914 MsG0180000264.01.T01:CDS
AGTGCACAGCAGGCAGGTCT+AGG 0.403112 1:+3518001 None:intergenic
ATGCCATTCTTATTAACTCT+TGG 0.403322 1:+3515620 None:intergenic
AGACGATTCAGATTCTCATT+AGG 0.405836 1:-3521419 MsG0180000264.01.T01:CDS
ACGAGATCCCGACCACGAAT+TGG 0.405858 1:+3516300 None:intergenic
AGGAGGGGATCCATCTCTTT+GGG 0.410282 1:-3520812 MsG0180000264.01.T01:CDS
TTGTTTCTTCTTCCTCTGGA+AGG 0.412723 1:+3523869 None:intergenic
GCGGATGTACTCAAATATTT+CGG 0.416309 1:-3520790 MsG0180000264.01.T01:CDS
CCTATATTCTGGGGCACACT+CGG 0.416345 1:+3517921 None:intergenic
GCTCAGTACATAAATACTAT+TGG 0.417530 1:-3521869 MsG0180000264.01.T01:CDS
TATCGCCAAGGCACCGCAAA+TGG 0.418739 1:+3517959 None:intergenic
GGAAAGAGGTTCAAGATCTT+AGG 0.422194 1:-3518074 MsG0180000264.01.T01:CDS
GGCTTGATCTATCTTGAGCT+GGG 0.425467 1:+3516274 None:intergenic
AACCCGGCTGTGTACCCTAT+TGG 0.426921 1:-3516129 MsG0180000264.01.T01:CDS
GAAAAGTTCCGAAAAGGAAA+AGG 0.428827 1:-3521079 MsG0180000264.01.T01:CDS
CCTGGTGCTTGAATAGGTTC+TGG 0.429912 1:+3516333 None:intergenic
TTTGGATAATGGGTCCAATA+GGG 0.431544 1:+3516115 None:intergenic
ATCCAAACAAGAACAGAATC+TGG 0.432060 1:-3516099 MsG0180000264.01.T01:CDS
CTGAGGTTCTGAGAAAATAT+GGG 0.432325 1:-3521931 MsG0180000264.01.T01:five_prime_UTR
AGCTTCCTAGAAATTGAAAA+AGG 0.436264 1:-3516186 MsG0180000264.01.T01:CDS
TGTTTCTTCTTCCTCTGGAA+GGG 0.439232 1:+3523870 None:intergenic
TCATTCCATTTGCGGTGCCT+TGG 0.440897 1:-3517964 MsG0180000264.01.T01:CDS
AAACTTCCGCCATTGATACA+TGG 0.442639 1:+3523927 None:intergenic
TCGAGTGTTGTTCGAGTGGA+AGG 0.443537 1:-3523803 MsG0180000264.01.T01:five_prime_UTR
CTGATCAGCAATAGTTCCAT+TGG 0.444085 1:+3521101 None:intergenic
GGGATGACAATAAAGGAGTA+TGG 0.445490 1:-3521471 MsG0180000264.01.T01:CDS
TAAAGTGGATGTTCTGTCTC+TGG 0.445656 1:+3521003 None:intergenic
AATTGCATGCTGCAAAAGAC+TGG 0.448531 1:-3520848 MsG0180000264.01.T01:CDS
CTAAGACAGACCTATATTCT+GGG 0.451299 1:+3517911 None:intergenic
TGGATATATACAACTCTAAG+AGG 0.457967 1:+3521217 None:intergenic
ACTAATGCACTCAAAGAAGA+TGG 0.462291 1:-3515497 MsG0180000264.01.T01:CDS
TGAAGGAAAGTTCAATTCGT+TGG 0.464411 1:+3521197 None:intergenic
AGGTCAGGATTCACCTGCTC+AGG 0.464965 1:-3521256 MsG0180000264.01.T01:CDS
TAAATTGATCAAGTGTCTCA+TGG 0.470653 1:-3515576 MsG0180000264.01.T01:CDS
TTGTTAATCTCCACCTGAGC+AGG 0.474815 1:+3521243 None:intergenic
AAATGAATTCATTCAAAGAT+GGG 0.475672 1:-3520951 MsG0180000264.01.T01:CDS
GCATGCACTCATTCCATTTG+CGG 0.477204 1:-3517972 MsG0180000264.01.T01:CDS
CCGCGGCGGCCATGTATCAA+TGG 0.478918 1:-3523936 MsG0180000264.01.T01:five_prime_UTR
TCAGGCAGGGATGACAATAA+AGG 0.481244 1:-3521478 MsG0180000264.01.T01:intron
TAAGAATGGCATTGTCGAAA+GGG 0.483422 1:-3515609 MsG0180000264.01.T01:CDS
GAAATGAATTCATTCAAAGA+TGG 0.484480 1:-3520952 MsG0180000264.01.T01:CDS
CCGTCTTGAAAGGCGTGAAA+AGG 0.484924 1:-3521055 MsG0180000264.01.T01:CDS
TAGTGTACCAATTCGTGGTC+GGG 0.488000 1:-3516307 MsG0180000264.01.T01:CDS
CATTGCTCGGAAGCTTGAGC+AGG 0.494654 1:-3520629 MsG0180000264.01.T01:CDS
ATGCACATGAAGTGCACAGC+AGG 0.497823 1:+3517991 None:intergenic
CGGAAGTTTCGAATTCTTCG+AGG 0.499375 1:-3523913 MsG0180000264.01.T01:five_prime_UTR
TTCAGTATCACAGTCTAATG+AGG 0.507019 1:-3521178 MsG0180000264.01.T01:CDS
GCTAAATCAACATCATAAAG+TGG 0.508250 1:+3520988 None:intergenic
CTATATTCTGGGGCACACTC+GGG 0.512624 1:+3517922 None:intergenic
AGTAATCGCTTGCTATATGC+AGG 0.516062 1:-3520890 MsG0180000264.01.T01:CDS
ACCGTTTGCTTCTTCGATCG+AGG 0.516521 1:-3523753 MsG0180000264.01.T01:five_prime_UTR
CTTGGAAAAGCTACATGAGA+AGG 0.516604 1:-3521778 MsG0180000264.01.T01:CDS
CGAGTGTTGTTCGAGTGGAA+GGG 0.517080 1:-3523802 MsG0180000264.01.T01:five_prime_UTR
TCTCTTTATTCAACAACTCA+AGG 0.517822 1:-3523688 MsG0180000264.01.T01:intron
GACAAAAGAGGACGTTCAAA+TGG 0.519441 1:-3521378 MsG0180000264.01.T01:intron
TCACTGAAAGTGTGAGGCAA+GGG 0.519511 1:+3520662 None:intergenic
AGAATCTGGTAATAATGGTA+TGG 0.523783 1:-3516085 MsG0180000264.01.T01:CDS
TGATCAGAAAAGTTCCGAAA+AGG 0.523848 1:-3521085 MsG0180000264.01.T01:CDS
TGAAAGAGAAAGAGAAGGAG+AGG 0.526239 1:-3523833 MsG0180000264.01.T01:five_prime_UTR
GTCCAATAGGGTACACAGCC+GGG 0.527933 1:+3516127 None:intergenic
AGGCCAAGAGTTAATAAGAA+TGG 0.530063 1:-3515623 MsG0180000264.01.T01:CDS
AAAAGTTCCGAAAAGGAAAA+GGG 0.535509 1:-3521078 MsG0180000264.01.T01:CDS
CATTAGGCTTTGCACAGACG+AGG 0.539579 1:-3521403 MsG0180000264.01.T01:CDS
AGTACATCCGCCCAAAGAGA+TGG 0.540263 1:+3520802 None:intergenic
AGGAAAAGGGCCGTCTTGAA+AGG 0.540276 1:-3521065 MsG0180000264.01.T01:CDS
GAGTGTTGTTCGAGTGGAAG+GGG 0.540505 1:-3523801 MsG0180000264.01.T01:five_prime_UTR
CGTCTTGAAAGGCGTGAAAA+GGG 0.546551 1:-3521054 MsG0180000264.01.T01:CDS
GGTCCAATAGGGTACACAGC+CGG 0.548275 1:+3516126 None:intergenic
GCAGGAATCAAAGGTGATTG+AGG 0.554065 1:-3520611 MsG0180000264.01.T01:CDS
TCAGGATTCACCTGCTCAGG+TGG 0.554680 1:-3521253 MsG0180000264.01.T01:CDS
CCAGAACCTATTCAAGCACC+AGG 0.555925 1:-3516333 MsG0180000264.01.T01:CDS
AAGAGAACAGAAGAAGAATG+AGG 0.556997 1:+3523705 None:intergenic
AAAATAAGTGCCCAAACCAA+TGG 0.557751 1:-3521117 MsG0180000264.01.T01:CDS
GTGCACAGCAGGCAGGTCTA+GGG 0.558000 1:+3518002 None:intergenic
CTAATGCACTCAAAGAAGAT+GGG 0.561475 1:-3515496 MsG0180000264.01.T01:CDS
ATAAGAATGGCATTGTCGAA+AGG 0.563362 1:-3515610 MsG0180000264.01.T01:CDS
ATCTTCGAGTGTTGTTCGAG+TGG 0.564342 1:-3523807 MsG0180000264.01.T01:five_prime_UTR
TACACATGCTTAAGAGTGCA+TGG 0.567883 1:-3521029 MsG0180000264.01.T01:CDS
CAACGTGAAAGAGAAAGAGA+AGG 0.569287 1:-3523838 MsG0180000264.01.T01:five_prime_UTR
CGAATTGGTACACTACTACC+TGG 0.569563 1:+3516315 None:intergenic
GGTAGTAGTGTACCAATTCG+TGG 0.573511 1:-3516312 MsG0180000264.01.T01:CDS
GAAGCTTGAGCAGGAATCAA+AGG 0.573976 1:-3520620 MsG0180000264.01.T01:CDS
TGATCAAGGATTACATTGCT+CGG 0.575906 1:-3520642 MsG0180000264.01.T01:CDS
CATTCGAACCAAAATTGCGA+AGG 0.577956 1:+3523991 None:intergenic
TTGATCAAGTGTCTCATGGA+AGG 0.580727 1:-3515572 MsG0180000264.01.T01:CDS
ATCACTGAAAGTGTGAGGCA+AGG 0.582038 1:+3520661 None:intergenic
ACATGAAGTGCACAGCAGGC+AGG 0.590221 1:+3517995 None:intergenic
TCCTCGATCGAAGAAGCAAA+CGG 0.594689 1:+3523752 None:intergenic
AGAATCTGAATCGTCTCCGA+TGG 0.595348 1:+3521426 None:intergenic
CACACAGGCAATGAGGAAAG+AGG 0.596991 1:-3518088 MsG0180000264.01.T01:CDS
TATGCAGGCGCATGATCACA+AGG 0.597985 1:-3520875 MsG0180000264.01.T01:CDS
TTGGAAAAGCTACATGAGAA+GGG 0.599303 1:-3521777 MsG0180000264.01.T01:intron
GTAGTGTACCAATTCGTGGT+CGG 0.600235 1:-3516308 MsG0180000264.01.T01:CDS
GCAAGACTATGATGAGGCAA+TGG 0.600642 1:-3521891 MsG0180000264.01.T01:exon
GAGTTTGAAGGACAATTATG+GGG 0.601929 1:+3520695 None:intergenic
TGGGTGATTCAGTTAAAGGA+GGG 0.607280 1:-3520828 MsG0180000264.01.T01:CDS
TATATTCTGGGGCACACTCG+GGG 0.610780 1:+3517923 None:intergenic
TCTAATAGAGCACAAGCCAT+CGG 0.612609 1:-3521442 MsG0180000264.01.T01:CDS
CTGGGTGATTCAGTTAAAGG+AGG 0.613053 1:-3520829 MsG0180000264.01.T01:CDS
ACAGACGAGGGTGACAAAAG+AGG 0.616703 1:-3521390 MsG0180000264.01.T01:CDS
TTTCTCAATTAGCACACATG+TGG 0.617174 1:-3515457 MsG0180000264.01.T01:CDS
CTCTGTGCAGGAAGACACAC+AGG 0.626890 1:-3518103 MsG0180000264.01.T01:intron
TCATTAGACTGTGATACTGA+AGG 0.629024 1:+3521180 None:intergenic
TCAGTATCACAGTCTAATGA+GGG 0.633103 1:-3521177 MsG0180000264.01.T01:CDS
TAAGACAGACCTATATTCTG+GGG 0.635945 1:+3517912 None:intergenic
GAATGGCATTGTCGAAAGGG+AGG 0.636438 1:-3515606 MsG0180000264.01.T01:CDS
AGTTTGAAGGACAATTATGG+GGG 0.640269 1:+3520696 None:intergenic
CCTTGATCACTGAAAGTGTG+AGG 0.642300 1:+3520656 None:intergenic
AATGCAGTTGTGCTGAGTGA+AGG 0.642661 1:-3515662 MsG0180000264.01.T01:CDS
AGATGCTGCAGCTACTTCTG+AGG 0.644849 1:-3521948 MsG0180000264.01.T01:five_prime_UTR
TGAGGTTCTGAGAAAATATG+GGG 0.647630 1:-3521930 MsG0180000264.01.T01:five_prime_UTR
GCTGAGTGAAGGCCTTAAAG+TGG 0.651550 1:-3515651 MsG0180000264.01.T01:CDS
GGATATATACAACTCTAAGA+GGG 0.651731 1:+3521218 None:intergenic
GAAACATACAAAACTGAACA+AGG 0.653193 1:+3516032 None:intergenic
CTGAGTGAAGGCCTTAAAGT+GGG 0.656868 1:-3515650 MsG0180000264.01.T01:CDS
AGGAAGACACACAGGCAATG+AGG 0.657761 1:-3518095 MsG0180000264.01.T01:CDS
GGAATCAAAGGTGATTGAGG+AGG 0.659787 1:-3520608 MsG0180000264.01.T01:CDS
AGTGGATGTTCTGTCTCTGG+AGG 0.660662 1:+3521006 None:intergenic
GCTTGATCTATCTTGAGCTG+GGG 0.661900 1:+3516275 None:intergenic
ATTAGGCTTTGCACAGACGA+GGG 0.662527 1:-3521402 MsG0180000264.01.T01:CDS
ATTGCATGCTGCAAAAGACT+GGG 0.673354 1:-3520847 MsG0180000264.01.T01:CDS
AAGGCCTTAAAGTGGGACTG+AGG 0.673667 1:-3515643 MsG0180000264.01.T01:CDS
TTGAAACTGCACCCTTCCAG+AGG 0.674514 1:-3523881 MsG0180000264.01.T01:five_prime_UTR
CGGCGGCCATGTATCAATGG+CGG 0.675387 1:-3523933 MsG0180000264.01.T01:five_prime_UTR
AGGGGATCCATCTCTTTGGG+CGG 0.679575 1:-3520809 MsG0180000264.01.T01:CDS
CAGCAAGCAAGACTATGATG+AGG 0.681320 1:-3521897 MsG0180000264.01.T01:five_prime_UTR
ATGGTATGGAGTGTCTGTCA+TGG 0.681502 1:-3516071 MsG0180000264.01.T01:CDS
CCATTGATACATGGCCGCCG+CGG 0.685926 1:+3523936 None:intergenic
ATGCAGGCGCATGATCACAA+GGG 0.688495 1:-3520874 MsG0180000264.01.T01:CDS
GGGTGATTCAGTTAAAGGAG+GGG 0.693595 1:-3520827 MsG0180000264.01.T01:CDS
GTTTGAAGGACAATTATGGG+GGG 0.705881 1:+3520697 None:intergenic
AAGATCTTAGGACAAATGCG+AGG 0.706313 1:-3518062 MsG0180000264.01.T01:CDS
AAGGTTTCTTCAAATTAACG+CGG 0.753070 1:+3524010 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAATTGAATAAATTGA+AGG + Chr1:3515816-3515835 None:intergenic 10.0%
!! AGTTATAAGATAAATATTTA+AGG - Chr1:3522089-3522108 MsG0180000264.01.T01:intron 10.0%
!!! CAATTTATTCAATTATATTT+TGG - Chr1:3515817-3515836 MsG0180000264.01.T01:intron 10.0%
!!! TTTATTATTTTATAAAACTC+TGG + Chr1:3520239-3520258 None:intergenic 10.0%
!! GATCTTATCAAAATAATATA+GGG + Chr1:3522398-3522417 None:intergenic 15.0%
!! TTAGATAAATTATATCTGTA+TGG - Chr1:3516637-3516656 MsG0180000264.01.T01:intron 15.0%
!!! TTAAAAGTGTAATATTATGA+CGG - Chr1:3522156-3522175 MsG0180000264.01.T01:intron 15.0%
!!! TTTTATCTTTCAGATATAAA+GGG + Chr1:3519888-3519907 None:intergenic 15.0%
!! AAATGAATTCATTCAAAGAT+GGG - Chr1:3518515-3518534 MsG0180000264.01.T01:intron 20.0%
!! AAATTATATCTGTATGGTAA+TGG - Chr1:3516643-3516662 MsG0180000264.01.T01:intron 20.0%
!! AATATTAGGAAATGAGAAAA+TGG + Chr1:3519006-3519025 None:intergenic 20.0%
!! ATAAAAATATATTGAGAGCA+AGG + Chr1:3517079-3517098 None:intergenic 20.0%
!! CCATATAAATTATAAACATG+CGG + Chr1:3521069-3521088 None:intergenic 20.0%
!! CTCTAAATCCTAATTAAATA+AGG + Chr1:3520716-3520735 None:intergenic 20.0%
!! GATACAATGTTAAAAATGTA+TGG + Chr1:3519911-3519930 None:intergenic 20.0%
!! GGATCTTATCAAAATAATAT+AGG + Chr1:3522399-3522418 None:intergenic 20.0%
!! TAAATAAGGAGGAAAAAAAA+TGG + Chr1:3520702-3520721 None:intergenic 20.0%
!! TAAATCCTAATTAAATAAGG+AGG + Chr1:3520713-3520732 None:intergenic 20.0%
!! TCTTGAAAAATATACCAATA+AGG - Chr1:3518190-3518209 MsG0180000264.01.T01:intron 20.0%
!! TGAGTAATCATAAATTCTTA+GGG - Chr1:3523518-3523537 MsG0180000264.01.T01:intron 20.0%
!! TTGAGTAATCATAAATTCTT+AGG - Chr1:3523517-3523536 MsG0180000264.01.T01:intron 20.0%
!!! AAATTTTTTAGAAGGATTGA+AGG - Chr1:3522006-3522025 MsG0180000264.01.T01:intron 20.0%
!!! AAGTTTTGAATTACATTGAA+AGG - Chr1:3518734-3518753 MsG0180000264.01.T01:intron 20.0%
!!! AGTATATTTTATGAAGTTGA+TGG - Chr1:3517185-3517204 MsG0180000264.01.T01:intron 20.0%
!!! AGTTTTGAATTACATTGAAA+GGG - Chr1:3518735-3518754 MsG0180000264.01.T01:intron 20.0%
!!! ATATTAGTTTACAGTATCAT+AGG - Chr1:3520656-3520675 MsG0180000264.01.T01:CDS 20.0%
!!! ATGCTTCTTTTTAATGATTT+TGG - Chr1:3516697-3516716 MsG0180000264.01.T01:intron 20.0%
!!! ATTTTTCAAGAAAATCCATA+AGG + Chr1:3518181-3518200 None:intergenic 20.0%
!!! GTTTTATCTTTCAGATATAA+AGG + Chr1:3519889-3519908 None:intergenic 20.0%
!!! TAAATATTTAAGGCAATGTT+AGG - Chr1:3522099-3522118 MsG0180000264.01.T01:intron 20.0%
!!! TTCTAAAAAATTTGATACTC+CGG + Chr1:3521999-3522018 None:intergenic 20.0%
!!! TTTCTTTTTAACCAACATAT+AGG + Chr1:3516320-3516339 None:intergenic 20.0%
!!! TTTGTAAAGTTTGTTCTTTT+TGG - Chr1:3515842-3515861 MsG0180000264.01.T01:intron 20.0%
!!! TTTTAATGATTTTGGAATTG+TGG - Chr1:3516705-3516724 MsG0180000264.01.T01:intron 20.0%
!!! TTTTAGGAATTTACAAACAA+TGG - Chr1:3519198-3519217 MsG0180000264.01.T01:intron 20.0%
!!! TTTTTCAACATCTTTCAATT+TGG + Chr1:3517759-3517778 None:intergenic 20.0%
!!! TTTTTCAAGAAAATCCATAA+GGG + Chr1:3518180-3518199 None:intergenic 20.0%
!!! TTTTTCCTCCTTATTTAATT+AGG - Chr1:3520705-3520724 MsG0180000264.01.T01:CDS 20.0%
! AAAAATATACCAATAAGGTC+AGG - Chr1:3518195-3518214 MsG0180000264.01.T01:intron 25.0%
! AACAAGAGTTAACAATAAAC+AGG + Chr1:3522430-3522449 None:intergenic 25.0%
! AATAAGTTGTTAATCCAAAC+AGG - Chr1:3516255-3516274 MsG0180000264.01.T01:CDS 25.0%
! ACAAGCTATTGAAAAATATC+AGG - Chr1:3518885-3518904 MsG0180000264.01.T01:intron 25.0%
! AGACAAATCAACTATCTATT+GGG - Chr1:3517411-3517430 MsG0180000264.01.T01:intron 25.0%
! AGTAAACAACATATGAACAA+TGG + Chr1:3516098-3516117 None:intergenic 25.0%
! ATAAGTTGTTAATCCAAACA+GGG - Chr1:3516256-3516275 MsG0180000264.01.T01:CDS 25.0%
! ATCAATACTAGTGCAATTAA+TGG + Chr1:3519378-3519397 None:intergenic 25.0%
! ATGAATGATCCAAAAACATA+TGG - Chr1:3519811-3519830 MsG0180000264.01.T01:intron 25.0%
! ATGGCTATTTGTATATGTAA+TGG + Chr1:3518987-3519006 None:intergenic 25.0%
! ATTAAATATGAGCAGGAATT+TGG - Chr1:3520855-3520874 MsG0180000264.01.T01:CDS 25.0%
! ATTCAAGAATAGAGACTAAA+TGG + Chr1:3522695-3522714 None:intergenic 25.0%
! CAATTTGAGCAAATAGAAAT+AGG + Chr1:3523081-3523100 None:intergenic 25.0%
! CACAATACATACAAGTAAAA+AGG + Chr1:3520402-3520421 None:intergenic 25.0%
! CATAATGTGACAACAATATT+AGG + Chr1:3519020-3519039 None:intergenic 25.0%
! CCGCATGTTTATAATTTATA+TGG - Chr1:3521066-3521085 MsG0180000264.01.T01:CDS 25.0%
! GAAAAATGTACTATATGTGA+TGG + Chr1:3520792-3520811 None:intergenic 25.0%
! GAAATGAATTCATTCAAAGA+TGG - Chr1:3518514-3518533 MsG0180000264.01.T01:intron 25.0%
! GTTGGTTAAAAAGAAAAGAT+TGG - Chr1:3516324-3516343 MsG0180000264.01.T01:CDS 25.0%
! TAAAAAGAAAAGATTGGTGA+AGG - Chr1:3516330-3516349 MsG0180000264.01.T01:CDS 25.0%
! TCTTCAACATTATCAATGTT+GGG - Chr1:3519840-3519859 MsG0180000264.01.T01:intron 25.0%
! TGAAAAGATGAAACTCTATA+AGG - Chr1:3518552-3518571 MsG0180000264.01.T01:intron 25.0%
! TGAACACAAATATGAGAAAA+TGG + Chr1:3519683-3519702 None:intergenic 25.0%
! TGCTTTATAACATATTGTGA+TGG + Chr1:3521044-3521063 None:intergenic 25.0%
! TTACTTGCTTAATAATCACT+TGG - Chr1:3522295-3522314 MsG0180000264.01.T01:intron 25.0%
! TTGGATTAACAACTTATTTG+CGG + Chr1:3516253-3516272 None:intergenic 25.0%
! TTGTGCTATAATATCTGTTA+CGG - Chr1:3521015-3521034 MsG0180000264.01.T01:CDS 25.0%
! TTTATCTTATAACTCCTTCA+AGG + Chr1:3522083-3522102 None:intergenic 25.0%
!! AAAAGATTTTGTTCTGTTGA+TGG - Chr1:3523244-3523263 MsG0180000264.01.T01:intron 25.0%
!! AAAAGTTGGTTTCTAAATGT+TGG - Chr1:3521812-3521831 MsG0180000264.01.T01:CDS 25.0%
!! AAAGATTTTGTTCTGTTGAT+GGG - Chr1:3523245-3523264 MsG0180000264.01.T01:intron 25.0%
!! AACTTAACCACAAATTTTCA+TGG - Chr1:3522626-3522645 MsG0180000264.01.T01:intron 25.0%
!! AACTTTTGTATCACATAAGA+AGG + Chr1:3517633-3517652 None:intergenic 25.0%
!! ATTTTCTCCATGAAAATTTG+TGG + Chr1:3522636-3522655 None:intergenic 25.0%
!! CAAAACTTCTTTTACTTCTT+TGG + Chr1:3518722-3518741 None:intergenic 25.0%
!! CAAATATGAGAAAATGGTTT+TGG + Chr1:3519677-3519696 None:intergenic 25.0%
!! CTTATGTGATACAAAAGTTT+TGG - Chr1:3517634-3517653 MsG0180000264.01.T01:intron 25.0%
!! TACATCTTTTATTGTCTTAG+AGG - Chr1:3516740-3516759 MsG0180000264.01.T01:intron 25.0%
!! TGCTTGATGAATAGATTTTT+GGG - Chr1:3515872-3515891 MsG0180000264.01.T01:intron 25.0%
!!! AAAGGGAGTCTTTAAAATTA+AGG + Chr1:3522952-3522971 None:intergenic 25.0%
!!! AAGTTTGTTTTCTGTTAGTT+AGG - Chr1:3519565-3519584 MsG0180000264.01.T01:intron 25.0%
!!! AGAAAAGTATCACTTCAATT+TGG + Chr1:3522126-3522145 None:intergenic 25.0%
!!! AGAAACCAACTTTTTAGTAT+TGG + Chr1:3521806-3521825 None:intergenic 25.0%
!!! ATTGCTGAATATTTTGGAAA+AGG - Chr1:3521663-3521682 MsG0180000264.01.T01:intron 25.0%
!!! CTATTTCTATTTGCTCAAAT+TGG - Chr1:3523079-3523098 MsG0180000264.01.T01:intron 25.0%
!!! CTCAAATTGTTATTTGTCAT+GGG + Chr1:3522226-3522245 None:intergenic 25.0%
!!! CTTCTAATGGATTTTTTTGT+AGG + Chr1:3519273-3519292 None:intergenic 25.0%
!!! CTTTAAAATTAAGGAGTTCA+AGG + Chr1:3522943-3522962 None:intergenic 25.0%
!!! GATATTTTTCAATAGCTTGT+CGG + Chr1:3518885-3518904 None:intergenic 25.0%
!!! GGAGTATCAAATTTTTTAGA+AGG - Chr1:3521998-3522017 MsG0180000264.01.T01:intron 25.0%
!!! TATTTCACATAGTGGATTTT+TGG - Chr1:3520502-3520521 MsG0180000264.01.T01:intron 25.0%
!!! TATTTTTTCTGTAAACAGCA+CGG - Chr1:3521316-3521335 MsG0180000264.01.T01:intron 25.0%
!!! TCAGTTTTGTATGTTTCTTT+TGG - Chr1:3523440-3523459 MsG0180000264.01.T01:intron 25.0%
!!! TTGCTGAATATTTTGGAAAA+GGG - Chr1:3521664-3521683 MsG0180000264.01.T01:intron 25.0%
AAAAGTTCCGAAAAGGAAAA+GGG - Chr1:3518388-3518407 MsG0180000264.01.T01:intron 30.0%
AAATGCTGAGAAAAATCAAC+AGG + Chr1:3518139-3518158 None:intergenic 30.0%
AAATTTGTGGTTAAGTTCAC+AGG + Chr1:3522623-3522642 None:intergenic 30.0%
AACAATAAACAGGAACAACA+AGG + Chr1:3522420-3522439 None:intergenic 30.0%
AACATGTAAACTCAAGAACA+TGG + Chr1:3521899-3521918 None:intergenic 30.0%
AAGGTTTCTTCAAATTAACG+CGG + Chr1:3515459-3515478 None:intergenic 30.0%
AAGTTAAGAACTCCAAAGAT+GGG - Chr1:3521631-3521650 MsG0180000264.01.T01:intron 30.0%
AATCACTTGGAGAGATAAAT+TGG - Chr1:3522308-3522327 MsG0180000264.01.T01:intron 30.0%
ACAAAAAGACCATTCAGAAT+CGG + Chr1:3521964-3521983 None:intergenic 30.0%
ACAAGAACAAATTGATGAGT+TGG - Chr1:3523481-3523500 MsG0180000264.01.T01:intron 30.0%
ACATGTTATATATATCACCC+AGG - Chr1:3521912-3521931 MsG0180000264.01.T01:five_prime_UTR 30.0%
AGAACAGAATCTGGTAATAA+TGG - Chr1:3523376-3523395 MsG0180000264.01.T01:intron 30.0%
AGAATCTGGTAATAATGGTA+TGG - Chr1:3523381-3523400 MsG0180000264.01.T01:intron 30.0%
AGAGTTTGAAGGACAATTAT+GGG + Chr1:3518775-3518794 None:intergenic 30.0%
AGCTTCCTAGAAATTGAAAA+AGG - Chr1:3523280-3523299 MsG0180000264.01.T01:intron 30.0%
ATGCCATTCTTATTAACTCT+TGG + Chr1:3523849-3523868 None:intergenic 30.0%
ATTAAAAGTGAAGACAGCAT+CGG - Chr1:3517790-3517809 MsG0180000264.01.T01:intron 30.0%
ATTAAAATTGCAGATGCAGA+TGG + Chr1:3519645-3519664 None:intergenic 30.0%
ATTATCAGCAAAACAAGCAA+TGG - Chr1:3521687-3521706 MsG0180000264.01.T01:intron 30.0%
ATTTACAAACAATGGACCTA+TGG - Chr1:3519206-3519225 MsG0180000264.01.T01:intron 30.0%
CAAAAAAATCCATTAGAAGC+AGG - Chr1:3519274-3519293 MsG0180000264.01.T01:intron 30.0%
CAAGAAAAACCTATATACTG+TGG - Chr1:3517467-3517486 MsG0180000264.01.T01:intron 30.0%
CAGACAAATCAACTATCTAT+TGG - Chr1:3517410-3517429 MsG0180000264.01.T01:intron 30.0%
CATGAACAGGAGTTAATAAT+TGG - Chr1:3517150-3517169 MsG0180000264.01.T01:intron 30.0%
CCAATACTACTCATATCTAT+TGG - Chr1:3516771-3516790 MsG0180000264.01.T01:intron 30.0%
CCAATAGATATGAGTAGTAT+TGG + Chr1:3516774-3516793 None:intergenic 30.0%
CTATTTGCTCAAATTGGATA+AGG - Chr1:3523085-3523104 MsG0180000264.01.T01:intron 30.0%
CTTTCGAGGGAAAAAAAAAT+TGG - Chr1:3517225-3517244 MsG0180000264.01.T01:intron 30.0%
GAAAAATTTCCGATTCTGAA+TGG - Chr1:3521952-3521971 MsG0180000264.01.T01:five_prime_UTR 30.0%
GAAAACAGTTATAGCCTAAA+AGG - Chr1:3519752-3519771 MsG0180000264.01.T01:intron 30.0%
GAAACATACAAAACTGAACA+AGG + Chr1:3523437-3523456 None:intergenic 30.0%
GACAAATCAACTATCTATTG+GGG - Chr1:3517412-3517431 MsG0180000264.01.T01:intron 30.0%
GACTTATTTCAATCACTATG+CGG - Chr1:3520441-3520460 MsG0180000264.01.T01:intron 30.0%
GATAGTAACACAAGGATATT+GGG - Chr1:3519395-3519414 MsG0180000264.01.T01:intron 30.0%
GATGAATCTGATTAATTTCC+GGG - Chr1:3521834-3521853 MsG0180000264.01.T01:CDS 30.0%
GATTAATTGCCACAGTATAT+AGG + Chr1:3517479-3517498 None:intergenic 30.0%
GCTAAATCAACATCATAAAG+TGG + Chr1:3518481-3518500 None:intergenic 30.0%
GCTATTGAAAAATATCAGGT+TGG - Chr1:3518889-3518908 MsG0180000264.01.T01:intron 30.0%
GCTCAGTACATAAATACTAT+TGG - Chr1:3517597-3517616 MsG0180000264.01.T01:intron 30.0%
GGAAAAAAAAATTGGTAGGA+TGG - Chr1:3517233-3517252 MsG0180000264.01.T01:intron 30.0%
GGAGTAAGAATTTGTAAGAT+TGG + Chr1:3523216-3523235 None:intergenic 30.0%
GGATGAATCTGATTAATTTC+CGG - Chr1:3521833-3521852 MsG0180000264.01.T01:CDS 30.0%
GTCTTCAACATTATCAATGT+TGG - Chr1:3519839-3519858 MsG0180000264.01.T01:intron 30.0%
GTTGAAAGATTTACGTGTTA+AGG + Chr1:3520348-3520367 None:intergenic 30.0%
TAAATTGATCAAGTGTCTCA+TGG - Chr1:3523890-3523909 MsG0180000264.01.T01:five_prime_UTR 30.0%
TAAGTTGTTAATCCAAACAG+GGG - Chr1:3516257-3516276 MsG0180000264.01.T01:CDS 30.0%
TACATACAAGTAAAAAGGAG+TGG + Chr1:3520397-3520416 None:intergenic 30.0%
TCCATCCAATACTAAAAAGT+TGG - Chr1:3521798-3521817 MsG0180000264.01.T01:CDS 30.0%
TCTCTTTATTCAACAACTCA+AGG - Chr1:3515778-3515797 MsG0180000264.01.T01:intron 30.0%
TGATAGTAACACAAGGATAT+TGG - Chr1:3519394-3519413 MsG0180000264.01.T01:intron 30.0%
TGGATATATACAACTCTAAG+AGG + Chr1:3518252-3518271 None:intergenic 30.0%
TTAAAATTGCAGATGCAGAT+GGG + Chr1:3519644-3519663 None:intergenic 30.0%
TTATATATATCACCCAGGAA+TGG - Chr1:3521917-3521936 MsG0180000264.01.T01:five_prime_UTR 30.0%
TTATCTAAGTCAAAACCTTC+AGG + Chr1:3516493-3516512 None:intergenic 30.0%
TTCATAAAATATACTGCCTC+TGG + Chr1:3517180-3517199 None:intergenic 30.0%
TTCTCATATGCTCTATGAAT+GGG - Chr1:3517366-3517385 MsG0180000264.01.T01:intron 30.0%
TTCTGTATGTTAACATGAAC+AGG - Chr1:3517137-3517156 MsG0180000264.01.T01:intron 30.0%
TTTCAACTTCTCCATTAGTA+CGG - Chr1:3521858-3521877 MsG0180000264.01.T01:CDS 30.0%
TTTCTCATATGCTCTATGAA+TGG - Chr1:3517365-3517384 MsG0180000264.01.T01:intron 30.0%
! AACAAAATCTTTTAACACGC+TGG + Chr1:3523237-3523256 None:intergenic 30.0%
! ATAGATATGAGTAGTATTGG+AGG + Chr1:3516771-3516790 None:intergenic 30.0%
! CTGCTTGATGAATAGATTTT+TGG - Chr1:3515871-3515890 MsG0180000264.01.T01:intron 30.0%
! GCTGAAGTTCTTTACATTTT+AGG - Chr1:3519182-3519201 MsG0180000264.01.T01:intron 30.0%
! GGATATATACAACTCTAAGA+GGG + Chr1:3518251-3518270 None:intergenic 30.0%
! GGATTTTCTATTTCACATAG+TGG - Chr1:3520494-3520513 MsG0180000264.01.T01:intron 30.0%
! GTGAGTTTAAATGTTTTCCA+GGG - Chr1:3516357-3516376 MsG0180000264.01.T01:intron 30.0%
! GTTTCTGCTAGTTGATATAA+CGG - Chr1:3520191-3520210 MsG0180000264.01.T01:intron 30.0%
! TAACTCTTGTTTATACACTC+AGG - Chr1:3522439-3522458 MsG0180000264.01.T01:intron 30.0%
! TACATTTTTCTCTCCCTAAA+CGG - Chr1:3520802-3520821 MsG0180000264.01.T01:CDS 30.0%
! TAGTTGATATAACGGCAATA+GGG - Chr1:3520199-3520218 MsG0180000264.01.T01:intron 30.0%
! TCTGTCATTGCTGAATATTT+TGG - Chr1:3521657-3521676 MsG0180000264.01.T01:intron 30.0%
! TCTGTTCTTGTTTGGATAAT+GGG + Chr1:3523364-3523383 None:intergenic 30.0%
! TGAGTTTAAATGTTTTCCAG+GGG - Chr1:3516358-3516377 MsG0180000264.01.T01:intron 30.0%
! TGTGAGTTTAAATGTTTTCC+AGG - Chr1:3516356-3516375 MsG0180000264.01.T01:intron 30.0%
! TTCTGTTCTTGTTTGGATAA+TGG + Chr1:3523365-3523384 None:intergenic 30.0%
! TTTTCTGTTAGTGCTTCTAT+AGG + Chr1:3523307-3523326 None:intergenic 30.0%
!! AATTTTAAAGACTCCCTTTG+TGG - Chr1:3522953-3522972 MsG0180000264.01.T01:intron 30.0%
!! ACCAACTTTTTAGTATTGGA+TGG + Chr1:3521802-3521821 None:intergenic 30.0%
!! ATAGAAGCACTAACAGAAAA+AGG - Chr1:3523307-3523326 MsG0180000264.01.T01:intron 30.0%
!! ATATCTATTGGCTTAGACAA+TGG - Chr1:3516783-3516802 MsG0180000264.01.T01:intron 30.0%
!! ATGAACATTGATTTGAGAGA+TGG - Chr1:3515895-3515914 MsG0180000264.01.T01:intron 30.0%
!! ATTCTAGTTCTTAGAAACTG+TGG + Chr1:3520602-3520621 None:intergenic 30.0%
!! ATTCTTTTTCATTATCGCCA+AGG + Chr1:3521522-3521541 None:intergenic 30.0%
!! CTAGTATTGATAGTAACACA+AGG - Chr1:3519387-3519406 MsG0180000264.01.T01:intron 30.0%
!! GCTCAAATTGTTATTTGTCA+TGG + Chr1:3522227-3522246 None:intergenic 30.0%
!! TGAACATTGATTTGAGAGAT+GGG - Chr1:3515896-3515915 MsG0180000264.01.T01:intron 30.0%
!! TTGTATGTTTCTTTTGGAAG+TGG - Chr1:3523446-3523465 MsG0180000264.01.T01:intron 30.0%
!! TTTTTGTTGTAGTGTTATGC+CGG - Chr1:3521977-3521996 MsG0180000264.01.T01:intron 30.0%
!!! AAAGTTGTAACTGGTTTTGA+TGG - Chr1:3515689-3515708 MsG0180000264.01.T01:intron 30.0%
!!! ATGCTATTTTCTGTAATCTG+CGG - Chr1:3520529-3520548 MsG0180000264.01.T01:intron 30.0%
!!! TAGGACCTTTTTCAATTTCT+AGG + Chr1:3523288-3523307 None:intergenic 30.0%
!!! TTTTTTCTGATGCTACGTTA+AGG + Chr1:3518324-3518343 None:intergenic 30.0%
AAAACACTTTCCTCAATCAC+TGG - Chr1:3516884-3516903 MsG0180000264.01.T01:intron 35.0%
AAAACTGCGAAAGATCAACA+TGG + Chr1:3523595-3523614 None:intergenic 35.0%
AAAAGACCACAATCACCTAA+CGG + Chr1:3520974-3520993 None:intergenic 35.0%
AAAATAAGTGCCCAAACCAA+TGG - Chr1:3518349-3518368 MsG0180000264.01.T01:intron 35.0%
AAATGGAAACGTGTACTACA+AGG + Chr1:3522342-3522361 None:intergenic 35.0%
AACAAAAGCAACAATCTACC+TGG - Chr1:3522596-3522615 MsG0180000264.01.T01:intron 35.0%
AAGAGAACAGAAGAAGAATG+AGG + Chr1:3515764-3515783 None:intergenic 35.0%
AAGATCTTGCTTGAAGATCT+TGG - Chr1:3517921-3517940 MsG0180000264.01.T01:intron 35.0%
AAGGAATGGTTATTCCATCA+TGG - Chr1:3523648-3523667 MsG0180000264.01.T01:intron 35.0%
AATGACAGAAAACCCATCTT+TGG + Chr1:3521646-3521665 None:intergenic 35.0%
ACTAATGCACTCAAAGAAGA+TGG - Chr1:3523969-3523988 MsG0180000264.01.T01:five_prime_UTR 35.0%
AGAAAATCCATAAGGGAATG+AGG + Chr1:3518173-3518192 None:intergenic 35.0%
AGAACAAGACTAGATACATG+TGG + Chr1:3519976-3519995 None:intergenic 35.0%
AGACGATTCAGATTCTCATT+AGG - Chr1:3518047-3518066 MsG0180000264.01.T01:CDS 35.0%
AGGAATGGTTATTCCATCAT+GGG - Chr1:3523649-3523668 MsG0180000264.01.T01:intron 35.0%
AGGCCAAGAGTTAATAAGAA+TGG - Chr1:3523843-3523862 MsG0180000264.01.T01:five_prime_UTR 35.0%
AGTATCATAGGTGATCTCTT+AGG - Chr1:3520668-3520687 MsG0180000264.01.T01:CDS 35.0%
AGTTTGAAGGAATGAGTTTG+AGG + Chr1:3522796-3522815 None:intergenic 35.0%
AGTTTGAAGGACAATTATGG+GGG + Chr1:3518773-3518792 None:intergenic 35.0%
ATAAGAATGGCATTGTCGAA+AGG - Chr1:3523856-3523875 MsG0180000264.01.T01:five_prime_UTR 35.0%
ATAGAAATAGGTAGACAGAG+TGG + Chr1:3523069-3523088 None:intergenic 35.0%
ATATTGAGAGCAAGGAACAA+AGG + Chr1:3517071-3517090 None:intergenic 35.0%
ATCCAAACAAGAACAGAATC+TGG - Chr1:3523367-3523386 MsG0180000264.01.T01:intron 35.0%
ATCTATTGGGGAAAAGGATA+TGG - Chr1:3517424-3517443 MsG0180000264.01.T01:intron 35.0%
ATTCACTAATCAGTTTCCTG+AGG - Chr1:3516569-3516588 MsG0180000264.01.T01:intron 35.0%
ATTCATGAACCTGCTTCTAA+TGG + Chr1:3519286-3519305 None:intergenic 35.0%
CAAGTTAAGAACTCCAAAGA+TGG - Chr1:3521630-3521649 MsG0180000264.01.T01:intron 35.0%
CAGAGTTTGAAGGACAATTA+TGG + Chr1:3518776-3518795 None:intergenic 35.0%
CCTCGTAATTAAATATGAGC+AGG - Chr1:3520848-3520867 MsG0180000264.01.T01:CDS 35.0%
CCTGCTCATATTTAATTACG+AGG + Chr1:3520851-3520870 None:intergenic 35.0%
CGAGGGAAAAAAAAATTGGT+AGG - Chr1:3517229-3517248 MsG0180000264.01.T01:intron 35.0%
CTAAGACAGACCTATATTCT+GGG + Chr1:3521558-3521577 None:intergenic 35.0%
CTAATGCACTCAAAGAAGAT+GGG - Chr1:3523970-3523989 MsG0180000264.01.T01:five_prime_UTR 35.0%
CTACAACCTCACAAATTACT+TGG - Chr1:3517670-3517689 MsG0180000264.01.T01:intron 35.0%
CTTGTTTATACACTCAGGAA+TGG - Chr1:3522444-3522463 MsG0180000264.01.T01:intron 35.0%
GAAAAGTTCCGAAAAGGAAA+AGG - Chr1:3518387-3518406 MsG0180000264.01.T01:intron 35.0%
GAAAATCCATAAGGGAATGA+GGG + Chr1:3518172-3518191 None:intergenic 35.0%
GAAACATTTAGCATTCAGCA+AGG + Chr1:3517120-3517139 None:intergenic 35.0%
GAAGATGCAGATTAGTGTTT+GGG - Chr1:3521127-3521146 MsG0180000264.01.T01:CDS 35.0%
GAGTTTGAAGGACAATTATG+GGG + Chr1:3518774-3518793 None:intergenic 35.0%
GATCTGCAATAACACACAAA+AGG + Chr1:3517270-3517289 None:intergenic 35.0%
GCAGGAACTAAAAGAGATAT+AGG + Chr1:3521106-3521125 None:intergenic 35.0%
GCGGATGTACTCAAATATTT+CGG - Chr1:3518676-3518695 MsG0180000264.01.T01:intron 35.0%
GGATTTAAATCATGCAGATG+AGG - Chr1:3522177-3522196 MsG0180000264.01.T01:intron 35.0%
GGTTCAATTTACTGCATCAA+AGG - Chr1:3516804-3516823 MsG0180000264.01.T01:intron 35.0%
GTAACAGTTCAATAGAAGTG+TGG + Chr1:3517735-3517754 None:intergenic 35.0%
GTATCATAGGTGATCTCTTA+GGG - Chr1:3520669-3520688 MsG0180000264.01.T01:CDS 35.0%
GTGAAATAGAAAATCCGTCA+CGG + Chr1:3520490-3520509 None:intergenic 35.0%
GTTATTGCAGATCAAAGAAC+AGG - Chr1:3517277-3517296 MsG0180000264.01.T01:intron 35.0%
TAAACGGTTTCTGATACTCT+TGG - Chr1:3520818-3520837 MsG0180000264.01.T01:CDS 35.0%
TAAGAATGGCATTGTCGAAA+GGG - Chr1:3523857-3523876 MsG0180000264.01.T01:five_prime_UTR 35.0%
TAAGACAGACCTATATTCTG+GGG + Chr1:3521557-3521576 None:intergenic 35.0%
TAATGGAGAAGTTGAAAACC+CGG + Chr1:3521855-3521874 None:intergenic 35.0%
TACCACTGTAAACTCACATT+AGG + Chr1:3521273-3521292 None:intergenic 35.0%
TACCAGATTCTGTTCTTGTT+TGG + Chr1:3523372-3523391 None:intergenic 35.0%
TAGTTCTTAGAAACTGTGGT+TGG + Chr1:3520598-3520617 None:intergenic 35.0%
TATCATAGGTGATCTCTTAG+GGG - Chr1:3520670-3520689 MsG0180000264.01.T01:CDS 35.0%
TCAACTATCTATTGGGGAAA+AGG - Chr1:3517418-3517437 MsG0180000264.01.T01:intron 35.0%
TCAGTATCACAGTCTAATGA+GGG - Chr1:3518289-3518308 MsG0180000264.01.T01:intron 35.0%
TCATTAGACTGTGATACTGA+AGG + Chr1:3518289-3518308 None:intergenic 35.0%
TCCAGCTAAAGCTTACTAAA+AGG + Chr1:3520028-3520047 None:intergenic 35.0%
TCTCATATGCTCTATGAATG+GGG - Chr1:3517367-3517386 MsG0180000264.01.T01:intron 35.0%
TCTGCTATCAGTGTATTATG+TGG + Chr1:3519143-3519162 None:intergenic 35.0%
TCTTTGTAACTCAAGCAACA+TGG - Chr1:3520763-3520782 MsG0180000264.01.T01:CDS 35.0%
TGAAATAGAAAATCCGTCAC+GGG + Chr1:3520489-3520508 None:intergenic 35.0%
TGAAGATGCAGATTAGTGTT+TGG - Chr1:3521126-3521145 MsG0180000264.01.T01:CDS 35.0%
TGAAGGAAAGTTCAATTCGT+TGG + Chr1:3518272-3518291 None:intergenic 35.0%
TGACATCATGAAGAATGTCA+TGG - Chr1:3515975-3515994 MsG0180000264.01.T01:intron 35.0%
TGACTAAGGATTTCAATCTG+AGG + Chr1:3523677-3523696 None:intergenic 35.0%
TGAGAAAAATCAACAGGAGA+TGG + Chr1:3518133-3518152 None:intergenic 35.0%
TGAGCAGAGAATGTAGATAT+TGG - Chr1:3520882-3520901 MsG0180000264.01.T01:CDS 35.0%
TGATCAAGGATTACATTGCT+CGG - Chr1:3518824-3518843 MsG0180000264.01.T01:intron 35.0%
TGATCAGAAAAGTTCCGAAA+AGG - Chr1:3518381-3518400 MsG0180000264.01.T01:intron 35.0%
TGTTTACTTTCTCTGTCTTG+AGG - Chr1:3519708-3519727 MsG0180000264.01.T01:intron 35.0%
TGTTTGATGGAAGAGTTTGA+AGG + Chr1:3522809-3522828 None:intergenic 35.0%
TTAAAAGTGAAGACAGCATC+GGG - Chr1:3517791-3517810 MsG0180000264.01.T01:intron 35.0%
TTACGTGTTAAGGTGCATAT+AGG + Chr1:3520338-3520357 None:intergenic 35.0%
TTATAGCCTAAAAGGACTAG+AGG - Chr1:3519760-3519779 MsG0180000264.01.T01:intron 35.0%
TTCAAGGCCTGATGTAAATA+TGG + Chr1:3522927-3522946 None:intergenic 35.0%
TTCAGTATCACAGTCTAATG+AGG - Chr1:3518288-3518307 MsG0180000264.01.T01:intron 35.0%
TTGGAAAAGCTACATGAGAA+GGG - Chr1:3517689-3517708 MsG0180000264.01.T01:intron 35.0%
TTTCTCAATTAGCACACATG+TGG - Chr1:3524009-3524028 MsG0180000264.01.T01:five_prime_UTR 35.0%
! AAAATTCTAAGAGTCAGGAC+AGG - Chr1:3521598-3521617 MsG0180000264.01.T01:intron 35.0%
! AAAGTGCAGTTGATGTTTGA+TGG + Chr1:3522822-3522841 None:intergenic 35.0%
! AATATGCCTCTAGTCCTTTT+AGG + Chr1:3519769-3519788 None:intergenic 35.0%
! ACAAATTGATGAGTTGGCTA+TGG - Chr1:3523487-3523506 MsG0180000264.01.T01:intron 35.0%
! AGACACTAGCCATATGTTTT+TGG + Chr1:3519823-3519842 None:intergenic 35.0%
! AGAGCAAAATTCTAAGAGTC+AGG - Chr1:3521593-3521612 MsG0180000264.01.T01:intron 35.0%
! AGAGTATCAGAAACCGTTTA+GGG + Chr1:3520818-3520837 None:intergenic 35.0%
! AGATCTTGGTAGTTATGAAG+AGG - Chr1:3517935-3517954 MsG0180000264.01.T01:CDS 35.0%
! ATACATGTGGACTAAAAGCA+AGG + Chr1:3519963-3519982 None:intergenic 35.0%
! ATCTGCTGAAGCACTATATT+TGG - Chr1:3522995-3523014 MsG0180000264.01.T01:intron 35.0%
! ATTCACATTGCTGTTATTCC+AGG - Chr1:3522657-3522676 MsG0180000264.01.T01:intron 35.0%
! CTAGTTGATATAACGGCAAT+AGG - Chr1:3520198-3520217 MsG0180000264.01.T01:intron 35.0%
! TCTAAGACAGACCTATATTC+TGG + Chr1:3521559-3521578 None:intergenic 35.0%
! TGAAGAAACCTTCGCAATTT+TGG - Chr1:3515467-3515486 MsG0180000264.01.T01:CDS 35.0%
! TGAAGCACTATATTTGGCTA+AGG - Chr1:3523001-3523020 MsG0180000264.01.T01:intron 35.0%
! TTTAGAAGGATTGAAGGTAC+TGG - Chr1:3522012-3522031 MsG0180000264.01.T01:intron 35.0%
! TTTCGCAGTTTTTACCATCT+GGG - Chr1:3523603-3523622 MsG0180000264.01.T01:intron 35.0%
!! AAATTAGAGCATTGACCGTT+AGG - Chr1:3520956-3520975 MsG0180000264.01.T01:CDS 35.0%
!! AAGAGTATCAGAAACCGTTT+AGG + Chr1:3520819-3520838 None:intergenic 35.0%
!! ACGATTTGTTATAAGCAGTG+AGG - Chr1:3519519-3519538 MsG0180000264.01.T01:intron 35.0%
!! AGCAATAGTTCCATTGGTTT+GGG + Chr1:3518362-3518381 None:intergenic 35.0%
!! CTGAGGTTCTGAGAAAATAT+GGG - Chr1:3517535-3517554 MsG0180000264.01.T01:intron 35.0%
!! GAGATGAATTTGGCTTTCTA+TGG + Chr1:3522886-3522905 None:intergenic 35.0%
!! GCTTTTCCAAGTAATTTGTG+AGG + Chr1:3517679-3517698 None:intergenic 35.0%
!! TATGTTTCTTTTGGAAGTGG+TGG - Chr1:3523449-3523468 MsG0180000264.01.T01:intron 35.0%
!! TCCTTTTAGTAAGCTTTAGC+TGG - Chr1:3520024-3520043 MsG0180000264.01.T01:intron 35.0%
!! TCTGAGGTTCTGAGAAAATA+TGG - Chr1:3517534-3517553 MsG0180000264.01.T01:intron 35.0%
!! TGAGGTTCTGAGAAAATATG+GGG - Chr1:3517536-3517555 MsG0180000264.01.T01:intron 35.0%
!! TTCTAGTCTTGAATCAAGTC+AGG - Chr1:3517970-3517989 MsG0180000264.01.T01:CDS 35.0%
!! TTTGGATAATGGGTCCAATA+GGG + Chr1:3523354-3523373 None:intergenic 35.0%
!!! AGATTGTTGCTTTTGTTCTG+TGG + Chr1:3522593-3522612 None:intergenic 35.0%
!!! AGGAAAGTGTTTTGTCTGAA+TGG + Chr1:3516877-3516896 None:intergenic 35.0%
!!! ATCGATTTTTTGTGAATCCG+CGG - Chr1:3515513-3515532 MsG0180000264.01.T01:CDS 35.0%
!!! GATTGTTGCTTTTGTTCTGT+GGG + Chr1:3522592-3522611 None:intergenic 35.0%
!!! GGTTTTTTGACAGAGTTTGA+AGG + Chr1:3518786-3518805 None:intergenic 35.0%
!!! TTTTATGAAGTTGATGGACG+TGG - Chr1:3517191-3517210 MsG0180000264.01.T01:intron 35.0%
AAAACAAGCTCACAGAACTC+GGG + Chr1:3516958-3516977 None:intergenic 40.0%
AAACTTCCGCCATTGATACA+TGG + Chr1:3515542-3515561 None:intergenic 40.0%
AAAGTATGTTGTCTCTGTGC+AGG - Chr1:3521351-3521370 MsG0180000264.01.T01:intron 40.0%
AAATTGGTAGGATGGTTTCG+TGG - Chr1:3517241-3517260 MsG0180000264.01.T01:intron 40.0%
AAGATCTTAGGACAAATGCG+AGG - Chr1:3521404-3521423 MsG0180000264.01.T01:CDS 40.0%
AAGCAAGTGACATGAAAGTC+TGG + Chr1:3522744-3522763 None:intergenic 40.0%
AAGTGACATGAAAGTCTGGA+TGG + Chr1:3522740-3522759 None:intergenic 40.0%
AATAACCATTCCTTGCTCCT+TGG + Chr1:3523642-3523661 None:intergenic 40.0%
AATCACTGGACTTGGGTTTA+GGG - Chr1:3516898-3516917 MsG0180000264.01.T01:intron 40.0%
AATCCTTAGTCACAGATCAG+TGG - Chr1:3523685-3523704 MsG0180000264.01.T01:intron 40.0%
AATGTCATGGTTAGTACCGT+GGG - Chr1:3515988-3516007 MsG0180000264.01.T01:intron 40.0%
AATTGCATGCTGCAAAAGAC+TGG - Chr1:3518618-3518637 MsG0180000264.01.T01:intron 40.0%
ACATAGACCTTCAACACCTT+CGG + Chr1:3519434-3519453 None:intergenic 40.0%
ACCAGATCCAATCTGATCAA+GGG + Chr1:3517011-3517030 None:intergenic 40.0%
ACCATAGTCTCATCCACTAT+CGG + Chr1:3519085-3519104 None:intergenic 40.0%
ACGAAGTAATACTGCTGATG+TGG - Chr1:3519464-3519483 MsG0180000264.01.T01:intron 40.0%
ACGATAACAAGCCGTACTAA+TGG + Chr1:3521872-3521891 None:intergenic 40.0%
ACTATCCTAGTTTCGCTGTT+AGG - Chr1:3520147-3520166 MsG0180000264.01.T01:intron 40.0%
AGACTGGGTGATTCAGTTAA+AGG - Chr1:3518634-3518653 MsG0180000264.01.T01:intron 40.0%
AGATGGGTAGTTGTAGATAG+TGG - Chr1:3515912-3515931 MsG0180000264.01.T01:intron 40.0%
AGCACACATGTGGAGAAATT+TGG - Chr1:3524019-3524038 MsG0180000264.01.T01:five_prime_UTR 40.0%
AGTTTCATTACCATTGCCTC+AGG + Chr1:3516588-3516607 None:intergenic 40.0%
ATTCTCTGCTCACCAAACAA+AGG + Chr1:3523783-3523802 None:intergenic 40.0%
ATTGCATGCTGCAAAAGACT+GGG - Chr1:3518619-3518638 MsG0180000264.01.T01:intron 40.0%
CAAACACAACTCCACAAAAC+CGG + Chr1:3520570-3520589 None:intergenic 40.0%
CAACGTGAAAGAGAAAGAGA+AGG - Chr1:3515628-3515647 MsG0180000264.01.T01:CDS 40.0%
CACAAAAAATCGATCGCGAT+CGG + Chr1:3515507-3515526 None:intergenic 40.0%
CACTCTGCCATATTTACATC+AGG - Chr1:3522917-3522936 MsG0180000264.01.T01:intron 40.0%
CATACAATAGACACCGATAG+TGG - Chr1:3519069-3519088 MsG0180000264.01.T01:intron 40.0%
CATCAAAGGAGATATTGCAC+GGG - Chr1:3516818-3516837 MsG0180000264.01.T01:intron 40.0%
CATTCGAACCAAAATTGCGA+AGG + Chr1:3515478-3515497 None:intergenic 40.0%
CTATCCTAGTTTCGCTGTTA+GGG - Chr1:3520148-3520167 MsG0180000264.01.T01:intron 40.0%
CTCAAATATTTCGGTGAGCT+TGG - Chr1:3518685-3518704 MsG0180000264.01.T01:intron 40.0%
CTCGCAAAACTAATGCGAAT+AGG + Chr1:3516042-3516061 None:intergenic 40.0%
CTGATCAGCAATAGTTCCAT+TGG + Chr1:3518368-3518387 None:intergenic 40.0%
CTGTAAACTCACATTAGGCA+AGG + Chr1:3521268-3521287 None:intergenic 40.0%
CTTGGAAAAGCTACATGAGA+AGG - Chr1:3517688-3517707 MsG0180000264.01.T01:intron 40.0%
GAAAACAAGCTCACAGAACT+CGG + Chr1:3516959-3516978 None:intergenic 40.0%
GACAAAAGAGGACGTTCAAA+TGG - Chr1:3518088-3518107 MsG0180000264.01.T01:CDS 40.0%
GCACTAACAGAAAAAGGAAG+TGG - Chr1:3523313-3523332 MsG0180000264.01.T01:intron 40.0%
GCATCAAAGGAGATATTGCA+CGG - Chr1:3516817-3516836 MsG0180000264.01.T01:intron 40.0%
GGAAAGAGGTTCAAGATCTT+AGG - Chr1:3521392-3521411 MsG0180000264.01.T01:CDS 40.0%
GGGATGACAATAAAGGAGTA+TGG - Chr1:3517995-3518014 MsG0180000264.01.T01:CDS 40.0%
GTTAATAATTGGTCGACCAG+AGG - Chr1:3517161-3517180 MsG0180000264.01.T01:intron 40.0%
GTTTGAAGGACAATTATGGG+GGG + Chr1:3518772-3518791 None:intergenic 40.0%
TAAAAGTGAAGACAGCATCG+GGG - Chr1:3517792-3517811 MsG0180000264.01.T01:intron 40.0%
TAAAGTGGATGTTCTGTCTC+TGG + Chr1:3518466-3518485 None:intergenic 40.0%
TAATCAGTTTCCTGAGGCAA+TGG - Chr1:3516575-3516594 MsG0180000264.01.T01:intron 40.0%
TCAATCACTTCAGGTGTTTG+CGG - Chr1:3516928-3516947 MsG0180000264.01.T01:intron 40.0%
TCTAATAGAGCACAAGCCAT+CGG - Chr1:3518024-3518043 MsG0180000264.01.T01:CDS 40.0%
TCTTAGAAACTGTGGTTGGT+TGG + Chr1:3520594-3520613 None:intergenic 40.0%
TCTTGAGGTCTGCATCAATT+GGG - Chr1:3519723-3519742 MsG0180000264.01.T01:intron 40.0%
TGAAAGAGAAAGAGAAGGAG+AGG - Chr1:3515633-3515652 MsG0180000264.01.T01:CDS 40.0%
TGATGATAGCTTCTCCTTGA+AGG - Chr1:3522066-3522085 MsG0180000264.01.T01:intron 40.0%
TGCAATGTACGTTGCAAAGA+AGG - Chr1:3517875-3517894 MsG0180000264.01.T01:intron 40.0%
TGCCTAATGTGAGTTTACAG+TGG - Chr1:3521268-3521287 MsG0180000264.01.T01:intron 40.0%
TGCTCATGGTAATTGCAGAA+CGG + Chr1:3517855-3517874 None:intergenic 40.0%
TGGGTGATTCAGTTAAAGGA+GGG - Chr1:3518638-3518657 MsG0180000264.01.T01:intron 40.0%
TTGATCAAGTGTCTCATGGA+AGG - Chr1:3523894-3523913 MsG0180000264.01.T01:five_prime_UTR 40.0%
TTGTGCACACATACAACCAT+AGG + Chr1:3519225-3519244 None:intergenic 40.0%
TTTCCTCAATCACTGGACTT+GGG - Chr1:3516891-3516910 MsG0180000264.01.T01:intron 40.0%
TTTCGCTGTTAGGGCAATAA+CGG - Chr1:3520157-3520176 MsG0180000264.01.T01:intron 40.0%
! AATGAGTTTGAGGCACTTGA+GGG + Chr1:3522786-3522805 None:intergenic 40.0%
! CACTATCGGTGTCTATTGTA+TGG + Chr1:3519071-3519090 None:intergenic 40.0%
! CAGCAATAGTTCCATTGGTT+TGG + Chr1:3518363-3518382 None:intergenic 40.0%
! CATCTTGTTTCTTCTTCCTC+TGG + Chr1:3515604-3515623 None:intergenic 40.0%
! CTTTCGCAGTTTTTACCATC+TGG - Chr1:3523602-3523621 MsG0180000264.01.T01:intron 40.0%
! GTGGTCTTTTAATGTGAAGC+AGG - Chr1:3520984-3521003 MsG0180000264.01.T01:CDS 40.0%
! GTGTCGTTGTGAGATGAATT+TGG + Chr1:3522896-3522915 None:intergenic 40.0%
! GTTTTTACCATCTGGGTTCT+TGG - Chr1:3523610-3523629 MsG0180000264.01.T01:intron 40.0%
! TACACATGCTTAAGAGTGCA+TGG - Chr1:3518437-3518456 MsG0180000264.01.T01:intron 40.0%
! TGTTTCTTCTTCCTCTGGAA+GGG + Chr1:3515599-3515618 None:intergenic 40.0%
! TTGATGAGTTGGCTATGGTT+TGG - Chr1:3523492-3523511 MsG0180000264.01.T01:intron 40.0%
! TTGGTAGTTATGAAGAGGCT+TGG - Chr1:3517940-3517959 MsG0180000264.01.T01:CDS 40.0%
! TTGTTTCTTCTTCCTCTGGA+AGG + Chr1:3515600-3515619 None:intergenic 40.0%
! TTTTCCACCTGAAGCTTGAA+CGG + Chr1:3516854-3516873 None:intergenic 40.0%
! TTTTCTGTAAACAGCACGGA+AGG - Chr1:3521320-3521339 MsG0180000264.01.T01:intron 40.0%
!! AGTAATCGCTTGCTATATGC+AGG - Chr1:3518576-3518595 MsG0180000264.01.T01:intron 40.0%
!! ATCTTTAACCAGAGCACTGT+GGG + Chr1:3517344-3517363 None:intergenic 40.0%
!! CTTTGGAGTTCTTAACTTGC+TGG + Chr1:3521629-3521648 None:intergenic 40.0%
!! GTTTGGATAATGGGTCCAAT+AGG + Chr1:3523355-3523374 None:intergenic 40.0%
!!! ATTAGTTTTGCGAGGCTGTT+TGG - Chr1:3516048-3516067 MsG0180000264.01.T01:CDS 40.0%
!!! CTATTCGCATTAGTTTTGCG+AGG - Chr1:3516040-3516059 MsG0180000264.01.T01:intron 40.0%
!!! CTTCGCAATTTTGGTTCGAA+TGG - Chr1:3515476-3515495 MsG0180000264.01.T01:CDS 40.0%
!!! TTAGTTTTGCGAGGCTGTTT+GGG - Chr1:3516049-3516068 MsG0180000264.01.T01:CDS 40.0%
AAACAAGCTCACAGAACTCG+GGG + Chr1:3516957-3516976 None:intergenic 45.0%
AAACCCAAGTCCAGTGATTG+AGG + Chr1:3516897-3516916 None:intergenic 45.0%
AAATGGCTATACCAAGCACC+TGG + Chr1:3522678-3522697 None:intergenic 45.0%
AACAAAGGCCATGTGATCAG+TGG + Chr1:3523768-3523787 None:intergenic 45.0%
AACAAGCAATGGATCCACTC+CGG - Chr1:3521698-3521717 MsG0180000264.01.T01:intron 45.0%
AAGGAAGTCAGTCACGCAAA+TGG + Chr1:3522359-3522378 None:intergenic 45.0%
AATGCAGTTGTGCTGAGTGA+AGG - Chr1:3523804-3523823 MsG0180000264.01.T01:five_prime_UTR 45.0%
ACACATGCATCACACTCTCA+AGG + Chr1:3523744-3523763 None:intergenic 45.0%
ACATACATATGGCCCCTGTT+TGG + Chr1:3516272-3516291 None:intergenic 45.0%
ACCCTTGATCAGATTGGATC+TGG - Chr1:3517007-3517026 MsG0180000264.01.T01:intron 45.0%
ACGCATATCCCAACACAATC+AGG + Chr1:3516547-3516566 None:intergenic 45.0%
ACTTGCTTCATTCCCACACT+TGG - Chr1:3522756-3522775 MsG0180000264.01.T01:intron 45.0%
AGAAAAAGGAAGTGGCAACC+CGG - Chr1:3523321-3523340 MsG0180000264.01.T01:intron 45.0%
AGAATCTGAATCGTCTCCGA+TGG + Chr1:3518043-3518062 None:intergenic 45.0%
AGGCAAACCCTTGATCAGAT+TGG - Chr1:3517001-3517020 MsG0180000264.01.T01:intron 45.0%
AGTCTTGAATCAAGTCAGGC+AGG - Chr1:3517974-3517993 MsG0180000264.01.T01:CDS 45.0%
ATCAACCATCAGTGCCACAA+AGG + Chr1:3522970-3522989 None:intergenic 45.0%
ATGGAGCTGAACAAGTAGCT+TGG + Chr1:3522721-3522740 None:intergenic 45.0%
ATGTACGTTGCAAAGAAGGC+TGG - Chr1:3517879-3517898 MsG0180000264.01.T01:intron 45.0%
ATTAGGCTTTGCACAGACGA+GGG - Chr1:3518064-3518083 MsG0180000264.01.T01:CDS 45.0%
ATTGCCCTAACAGCGAAACT+AGG + Chr1:3520155-3520174 None:intergenic 45.0%
CAACGTACATTGCATGCTCA+TGG + Chr1:3517869-3517888 None:intergenic 45.0%
CAATCACTGGACTTGGGTTT+AGG - Chr1:3516897-3516916 MsG0180000264.01.T01:intron 45.0%
CACACACGCACACATACATA+TGG + Chr1:3516283-3516302 None:intergenic 45.0%
CACCAGATCCAATCTGATCA+AGG + Chr1:3517012-3517031 None:intergenic 45.0%
CACTAATCTGCATCTTCAGC+AGG + Chr1:3521124-3521143 None:intergenic 45.0%
CAGCAAGCAAGACTATGATG+AGG - Chr1:3517569-3517588 MsG0180000264.01.T01:intron 45.0%
CAGGTGAATCCTGACCTTAT+TGG + Chr1:3518207-3518226 None:intergenic 45.0%
CATTGACCGTTAGGTGATTG+TGG - Chr1:3520965-3520984 MsG0180000264.01.T01:CDS 45.0%
CATTGCATGATCAACCACCA+AGG - Chr1:3516978-3516997 MsG0180000264.01.T01:intron 45.0%
CCTCACACTTTCAGTGATCA+AGG - Chr1:3518810-3518829 MsG0180000264.01.T01:intron 45.0%
CGAATTGGTACACTACTACC+TGG + Chr1:3523154-3523173 None:intergenic 45.0%
CGGAAGTTTCGAATTCTTCG+AGG - Chr1:3515553-3515572 MsG0180000264.01.T01:CDS 45.0%
CTACTACCTGGTGCTTGAAT+AGG + Chr1:3523142-3523161 None:intergenic 45.0%
CTGAGTGAAGGCCTTAAAGT+GGG - Chr1:3523816-3523835 MsG0180000264.01.T01:five_prime_UTR 45.0%
CTGATCACATGGCCTTTGTT+TGG - Chr1:3523768-3523787 MsG0180000264.01.T01:five_prime_UTR 45.0%
CTGGGTGATTCAGTTAAAGG+AGG - Chr1:3518637-3518656 MsG0180000264.01.T01:intron 45.0%
CTTGCTTCATTCCCACACTT+GGG - Chr1:3522757-3522776 MsG0180000264.01.T01:intron 45.0%
CTTTCCTCAATCACTGGACT+TGG - Chr1:3516890-3516909 MsG0180000264.01.T01:intron 45.0%
CTTTCTATGGTAGTCCCTTG+TGG + Chr1:3522873-3522892 None:intergenic 45.0%
GAAATAGGTAGACAGAGTGG+TGG + Chr1:3523066-3523085 None:intergenic 45.0%
GAAGCTTGAGCAGGAATCAA+AGG - Chr1:3518846-3518865 MsG0180000264.01.T01:intron 45.0%
GAATGTCATGGTTAGTACCG+TGG - Chr1:3515987-3516006 MsG0180000264.01.T01:intron 45.0%
GAGCGAAAAGCTGAAAGGAA+GGG + Chr1:3521780-3521799 None:intergenic 45.0%
GATTCTTGAGTCATTGCGGA+TGG - Chr1:3523710-3523729 MsG0180000264.01.T01:five_prime_UTR 45.0%
GCAAGACTATGATGAGGCAA+TGG - Chr1:3517575-3517594 MsG0180000264.01.T01:intron 45.0%
GCAGAGAATTGCAATCTCTC+TGG - Chr1:3519587-3519606 MsG0180000264.01.T01:intron 45.0%
GCAGGAATCAAAGGTGATTG+AGG - Chr1:3518855-3518874 MsG0180000264.01.T01:intron 45.0%
GCATGCACTCATTCCATTTG+CGG - Chr1:3521494-3521513 MsG0180000264.01.T01:intron 45.0%
GCTTGATCTATCTTGAGCTG+GGG + Chr1:3523194-3523213 None:intergenic 45.0%
GGAAATGCATCATCTAGCAG+TGG - Chr1:3521732-3521751 MsG0180000264.01.T01:intron 45.0%
GGAACGATGCTTACTTGAAG+CGG - Chr1:3519348-3519367 MsG0180000264.01.T01:intron 45.0%
GGAAGGGGTAAAGTTGTAAC+TGG - Chr1:3515680-3515699 MsG0180000264.01.T01:intron 45.0%
GGAATCAAAGGTGATTGAGG+AGG - Chr1:3518858-3518877 MsG0180000264.01.T01:intron 45.0%
GGCTTGATCTATCTTGAGCT+GGG + Chr1:3523195-3523214 None:intergenic 45.0%
GGGTGATTCAGTTAAAGGAG+GGG - Chr1:3518639-3518658 MsG0180000264.01.T01:intron 45.0%
GGGTTGAACTTCCAACATCA+AGG + Chr1:3522378-3522397 None:intergenic 45.0%
GGTAGTAGTGTACCAATTCG+TGG - Chr1:3523154-3523173 MsG0180000264.01.T01:intron 45.0%
GTAGTGTACCAATTCGTGGT+CGG - Chr1:3523158-3523177 MsG0180000264.01.T01:intron 45.0%
GTCTTGAATCAAGTCAGGCA+GGG - Chr1:3517975-3517994 MsG0180000264.01.T01:CDS 45.0%
GTCTTGAGGTCTGCATCAAT+TGG - Chr1:3519722-3519741 MsG0180000264.01.T01:intron 45.0%
TAGTGTACCAATTCGTGGTC+GGG - Chr1:3523159-3523178 MsG0180000264.01.T01:intron 45.0%
TCAACCATCAGTGCCACAAA+GGG + Chr1:3522969-3522988 None:intergenic 45.0%
TCAGGCAGGGATGACAATAA+AGG - Chr1:3517988-3518007 MsG0180000264.01.T01:CDS 45.0%
TCATCACCCTCATTCCCTTA+TGG - Chr1:3518163-3518182 MsG0180000264.01.T01:intron 45.0%
TCCTCGATCGAAGAAGCAAA+CGG + Chr1:3515717-3515736 None:intergenic 45.0%
TGAGTTCAAATCAAGACCCC+TGG + Chr1:3516377-3516396 None:intergenic 45.0%
TGCTGGAGGGAAGTAAACAT+AGG + Chr1:3523042-3523061 None:intergenic 45.0%
TGCTTGAACTCTCTGAGCAA+AGG - Chr1:3520914-3520933 MsG0180000264.01.T01:CDS 45.0%
TGGCTTGATCTATCTTGAGC+TGG + Chr1:3523196-3523215 None:intergenic 45.0%
TGGTAGTAGAGTAGCGTGAT+GGG - Chr1:3519484-3519503 MsG0180000264.01.T01:intron 45.0%
TGTACGTTGCAAAGAAGGCT+GGG - Chr1:3517880-3517899 MsG0180000264.01.T01:intron 45.0%
TTATAAGCAGTGAGGCTAGC+TGG - Chr1:3519527-3519546 MsG0180000264.01.T01:intron 45.0%
TTGTTAATCTCCACCTGAGC+AGG + Chr1:3518226-3518245 None:intergenic 45.0%
TTTCCACCTGAAGCTTGAAC+GGG + Chr1:3516853-3516872 None:intergenic 45.0%
! AAGACGGCCCTTTTCCTTTT+CGG + Chr1:3518398-3518417 None:intergenic 45.0%
! ATCACTGAAAGTGTGAGGCA+AGG + Chr1:3518808-3518827 None:intergenic 45.0%
! ATCTTCGAGTGTTGTTCGAG+TGG - Chr1:3515659-3515678 MsG0180000264.01.T01:CDS 45.0%
! ATGGTATGGAGTGTCTGTCA+TGG - Chr1:3523395-3523414 MsG0180000264.01.T01:intron 45.0%
! CCTTGATCACTGAAAGTGTG+AGG + Chr1:3518813-3518832 None:intergenic 45.0%
! CCTTTTCACGCCTTTCAAGA+CGG + Chr1:3518414-3518433 None:intergenic 45.0%
! CGTCTTGAAAGGCGTGAAAA+GGG - Chr1:3518412-3518431 MsG0180000264.01.T01:intron 45.0%
! GAATGAGTTTGAGGCACTTG+AGG + Chr1:3522787-3522806 None:intergenic 45.0%
! GCATTTCCAGATCTGAGATC+CGG + Chr1:3521720-3521739 None:intergenic 45.0%
! GGTGGATTCTTGAGTCATTG+CGG - Chr1:3523706-3523725 MsG0180000264.01.T01:five_prime_UTR 45.0%
! GTGACTGACTTCCTTGATGT+TGG - Chr1:3522364-3522383 MsG0180000264.01.T01:intron 45.0%
! TCACTGAAAGTGTGAGGCAA+GGG + Chr1:3518807-3518826 None:intergenic 45.0%
! TTGCTGTTATTCCAGGTGCT+TGG - Chr1:3522664-3522683 MsG0180000264.01.T01:intron 45.0%
!! ACCGATAGTGGATGAGACTA+TGG - Chr1:3519081-3519100 MsG0180000264.01.T01:intron 45.0%
!! CATCTTTAACCAGAGCACTG+TGG + Chr1:3517345-3517364 None:intergenic 45.0%
!! GATTGAAGGTACTGGTTGTG+TGG - Chr1:3522020-3522039 MsG0180000264.01.T01:intron 45.0%
!!! GATTTTTTGTGAATCCGCGG+CGG - Chr1:3515516-3515535 MsG0180000264.01.T01:CDS 45.0%
!! AAAAATATTTAATATCATTA+TGG - Chr1:3520627-3520646 MsG0180000264.01.T01:CDS 5.0%
!!! AATTTATTCAATTATATTTT+GGG - Chr1:3515818-3515837 MsG0180000264.01.T01:intron 5.0%
AAGGAGGGGATCCATCTCTT+TGG - Chr1:3518653-3518672 MsG0180000264.01.T01:intron 50.0%
AAGGCCTTAAAGTGGGACTG+AGG - Chr1:3523823-3523842 MsG0180000264.01.T01:five_prime_UTR 50.0%
AATCCCAACGACCTACCACA+AGG - Chr1:3522855-3522874 MsG0180000264.01.T01:intron 50.0%
AATCCGTCACGGGCAAATAG+CGG + Chr1:3520479-3520498 None:intergenic 50.0%
ACAGACGAGGGTGACAAAAG+AGG - Chr1:3518076-3518095 MsG0180000264.01.T01:CDS 50.0%
ACAGCGAGTCCTGATTGTGT+TGG - Chr1:3516535-3516554 MsG0180000264.01.T01:intron 50.0%
ACCGTTTGCTTCTTCGATCG+AGG - Chr1:3515713-3515732 MsG0180000264.01.T01:intron 50.0%
AGAAGGCTGGGAGACATGAA+TGG - Chr1:3517892-3517911 MsG0180000264.01.T01:intron 50.0%
AGATGCTGCAGCTACTTCTG+AGG - Chr1:3517518-3517537 MsG0180000264.01.T01:intron 50.0%
AGGAAAAGGGCCGTCTTGAA+AGG - Chr1:3518401-3518420 MsG0180000264.01.T01:intron 50.0%
AGGAAGACACACAGGCAATG+AGG - Chr1:3521371-3521390 MsG0180000264.01.T01:intron 50.0%
AGGAGGGGATCCATCTCTTT+GGG - Chr1:3518654-3518673 MsG0180000264.01.T01:intron 50.0%
AGGATATTGGGTCAGCAGAG+TGG - Chr1:3519407-3519426 MsG0180000264.01.T01:intron 50.0%
AGGCACAAAGCTGATTGCTG+GGG + Chr1:3516473-3516492 None:intergenic 50.0%
AGTACATCCGCCCAAAGAGA+TGG + Chr1:3518667-3518686 None:intergenic 50.0%
AGTCAATCCGAACAGACCCA+CGG + Chr1:3516007-3516026 None:intergenic 50.0%
AGTGGATGTTCTGTCTCTGG+AGG + Chr1:3518463-3518482 None:intergenic 50.0%
ATCCCAACGACCTACCACAA+GGG - Chr1:3522856-3522875 MsG0180000264.01.T01:intron 50.0%
ATGCACATGAAGTGCACAGC+AGG + Chr1:3521478-3521497 None:intergenic 50.0%
ATGCAGGCGCATGATCACAA+GGG - Chr1:3518592-3518611 MsG0180000264.01.T01:intron 50.0%
CACACAGGCAATGAGGAAAG+AGG - Chr1:3521378-3521397 MsG0180000264.01.T01:intron 50.0%
CAGCGAGTCCTGATTGTGTT+GGG - Chr1:3516536-3516555 MsG0180000264.01.T01:intron 50.0%
CAGGCACAAAGCTGATTGCT+GGG + Chr1:3516474-3516493 None:intergenic 50.0%
CATAGGTGATCTCTTAGGGG+TGG - Chr1:3520673-3520692 MsG0180000264.01.T01:CDS 50.0%
CATTAGGCTTTGCACAGACG+AGG - Chr1:3518063-3518082 MsG0180000264.01.T01:CDS 50.0%
CCACCACTGATCTGTGACTA+AGG + Chr1:3523691-3523710 None:intergenic 50.0%
CCAGAACCTATTCAAGCACC+AGG - Chr1:3523133-3523152 MsG0180000264.01.T01:intron 50.0%
CCTGGTGCTTGAATAGGTTC+TGG + Chr1:3523136-3523155 None:intergenic 50.0%
CCTTAGTCACAGATCAGTGG+TGG - Chr1:3523688-3523707 MsG0180000264.01.T01:intron 50.0%
CGACGTGGAAACAGCAATCA+GGG - Chr1:3517825-3517844 MsG0180000264.01.T01:intron 50.0%
CTATGGTAGTCCCTTGTGGT+AGG + Chr1:3522869-3522888 None:intergenic 50.0%
GAATGGCATTGTCGAAAGGG+AGG - Chr1:3523860-3523879 MsG0180000264.01.T01:five_prime_UTR 50.0%
GAGAACCAAGGAGCAAGGAA+TGG - Chr1:3523634-3523653 MsG0180000264.01.T01:intron 50.0%
GCACATGGGTGCCTATATGT+TGG - Chr1:3516306-3516325 MsG0180000264.01.T01:CDS 50.0%
GCTGAGTGAAGGCCTTAAAG+TGG - Chr1:3523815-3523834 MsG0180000264.01.T01:five_prime_UTR 50.0%
GGAGCGAAAAGCTGAAAGGA+AGG + Chr1:3521781-3521800 None:intergenic 50.0%
GGATATTGGGTCAGCAGAGT+GGG - Chr1:3519408-3519427 MsG0180000264.01.T01:intron 50.0%
GGATGGAGCGAAAAGCTGAA+AGG + Chr1:3521785-3521804 None:intergenic 50.0%
GTATCACCCGTTCAAGCTTC+AGG - Chr1:3516844-3516863 MsG0180000264.01.T01:intron 50.0%
GTGCTGAAAGATAGCACCAC+TGG + Chr1:3523568-3523587 None:intergenic 50.0%
GTGGTAGTAGAGTAGCGTGA+TGG - Chr1:3519483-3519502 MsG0180000264.01.T01:intron 50.0%
GTGGTTAAGTTCACAGGACC+AGG + Chr1:3522617-3522636 None:intergenic 50.0%
GTTAATAGCCCACAGTGCTC+TGG - Chr1:3517333-3517352 MsG0180000264.01.T01:intron 50.0%
GTTAGTACCGTGGGTCTGTT+CGG - Chr1:3515997-3516016 MsG0180000264.01.T01:intron 50.0%
GTTCTCTCCAAGAACCCAGA+TGG + Chr1:3523620-3523639 None:intergenic 50.0%
GTTGCAGCACGTGCATAGTT+AGG - Chr1:3522535-3522554 MsG0180000264.01.T01:intron 50.0%
TATGCAGGCGCATGATCACA+AGG - Chr1:3518591-3518610 MsG0180000264.01.T01:intron 50.0%
TCAGGCACAAAGCTGATTGC+TGG + Chr1:3516475-3516494 None:intergenic 50.0%
TCATCTAGCAGTGGCTTCTG+AGG - Chr1:3521741-3521760 MsG0180000264.01.T01:intron 50.0%
TCATTCCATTTGCGGTGCCT+TGG - Chr1:3521502-3521521 MsG0180000264.01.T01:intron 50.0%
TCGACGTGGAAACAGCAATC+AGG - Chr1:3517824-3517843 MsG0180000264.01.T01:intron 50.0%
TGATCAAGGGTTTGCCTCCT+TGG + Chr1:3516998-3517017 None:intergenic 50.0%
TGCATGATCAACCACCAAGG+AGG - Chr1:3516981-3517000 MsG0180000264.01.T01:intron 50.0%
TGGGTTCTTGGAGAGAACCA+AGG - Chr1:3523622-3523641 MsG0180000264.01.T01:intron 50.0%
TTACCAGCAACGCAACTTCC+TGG - Chr1:3516419-3516438 MsG0180000264.01.T01:intron 50.0%
TTACCAGGAAGTTGCGTTGC+TGG + Chr1:3516425-3516444 None:intergenic 50.0%
TTGAAACTGCACCCTTCCAG+AGG - Chr1:3515585-3515604 MsG0180000264.01.T01:CDS 50.0%
TTGATGAGCGAGCCATTCCT+GGG + Chr1:3521932-3521951 None:intergenic 50.0%
TTGGAGAGAACCAAGGAGCA+AGG - Chr1:3523629-3523648 MsG0180000264.01.T01:intron 50.0%
TTGGCCTCAGTCCCACTTTA+AGG + Chr1:3523830-3523849 None:intergenic 50.0%
TTTCCCTCGAAAGCCCAACA+AGG + Chr1:3517218-3517237 None:intergenic 50.0%
TTTCCGCTATTTGCCCGTGA+CGG - Chr1:3520473-3520492 MsG0180000264.01.T01:intron 50.0%
! ACGCAACTTCCTGGTAACGA+TGG - Chr1:3516428-3516447 MsG0180000264.01.T01:intron 50.0%
! CAAGTAAGCATCGTTCCTGC+TGG + Chr1:3519345-3519364 None:intergenic 50.0%
! CATGTGTGCCACTGATCACA+TGG - Chr1:3523757-3523776 MsG0180000264.01.T01:five_prime_UTR 50.0%
! CCGTCTTGAAAGGCGTGAAA+AGG - Chr1:3518411-3518430 MsG0180000264.01.T01:intron 50.0%
! CGAGTGTTGTTCGAGTGGAA+GGG - Chr1:3515664-3515683 MsG0180000264.01.T01:CDS 50.0%
! CGCAACTTCCTGGTAACGAT+GGG - Chr1:3516429-3516448 MsG0180000264.01.T01:intron 50.0%
! GAGTGTTGTTCGAGTGGAAG+GGG - Chr1:3515665-3515684 MsG0180000264.01.T01:CDS 50.0%
! GCAACTTCCTGGTAACGATG+GGG - Chr1:3516430-3516449 MsG0180000264.01.T01:intron 50.0%
! GCAATCAGCTTTGTGCCTGA+AGG - Chr1:3516475-3516494 MsG0180000264.01.T01:intron 50.0%
! TCAATCTGAGGTGCCCATGA+TGG + Chr1:3523665-3523684 None:intergenic 50.0%
! TCGAGTGTTGTTCGAGTGGA+AGG - Chr1:3515663-3515682 MsG0180000264.01.T01:CDS 50.0%
! TGATGGACGTGGTCCTTGTT+GGG - Chr1:3517202-3517221 MsG0180000264.01.T01:intron 50.0%
! TTGATGGACGTGGTCCTTGT+TGG - Chr1:3517201-3517220 MsG0180000264.01.T01:intron 50.0%
!! CAAAACCGGCTTGTGAGATG+AGG + Chr1:3520556-3520575 None:intergenic 50.0%
!! CATCTCACAAGCCGGTTTTG+TGG - Chr1:3520556-3520575 MsG0180000264.01.T01:intron 50.0%
!! CCTATATTCTGGGGCACACT+CGG + Chr1:3521548-3521567 None:intergenic 50.0%
!! CTATATTCTGGGGCACACTC+GGG + Chr1:3521547-3521566 None:intergenic 50.0%
!! GTAGAGTAGCGTGATGGGTT+TGG - Chr1:3519489-3519508 MsG0180000264.01.T01:intron 50.0%
!! TATATTCTGGGGCACACTCG+GGG + Chr1:3521546-3521565 None:intergenic 50.0%
AACCCGGCTGTGTACCCTAT+TGG - Chr1:3523337-3523356 MsG0180000264.01.T01:intron 55.0%
ACATGAAGTGCACAGCAGGC+AGG + Chr1:3521474-3521493 None:intergenic 55.0%
ACGAGATCCCGACCACGAAT+TGG + Chr1:3523169-3523188 None:intergenic 55.0%
ACTTGAGGGTGACCCAAGTG+TGG + Chr1:3522772-3522791 None:intergenic 55.0%
AGGGGATCCATCTCTTTGGG+CGG - Chr1:3518657-3518676 MsG0180000264.01.T01:intron 55.0%
AGGTCAGGATTCACCTGCTC+AGG - Chr1:3518210-3518229 MsG0180000264.01.T01:intron 55.0%
AGGTCGTTGGGATTCACAGG+TGG + Chr1:3522849-3522868 None:intergenic 55.0%
AGTCCCTTGTGGTAGGTCGT+TGG + Chr1:3522862-3522881 None:intergenic 55.0%
CACTGGACTTGGGTTTAGGG+TGG - Chr1:3516901-3516920 MsG0180000264.01.T01:intron 55.0%
CATTGCTCGGAAGCTTGAGC+AGG - Chr1:3518837-3518856 MsG0180000264.01.T01:intron 55.0%
CCGAGTGTGCCCCAGAATAT+AGG - Chr1:3521545-3521564 MsG0180000264.01.T01:intron 55.0%
CCTGACTGAAGAAGTCCAGC+AGG - Chr1:3519327-3519346 MsG0180000264.01.T01:intron 55.0%
CCTGCTGGACTTCTTCAGTC+AGG + Chr1:3519330-3519349 None:intergenic 55.0%
CGGGGAACTTAAGTTCGACG+TGG - Chr1:3517810-3517829 MsG0180000264.01.T01:intron 55.0%
CTCTGTGCAGGAAGACACAC+AGG - Chr1:3521363-3521382 MsG0180000264.01.T01:intron 55.0%
CTTGAGGGTGACCCAAGTGT+GGG + Chr1:3522771-3522790 None:intergenic 55.0%
CTTGATGAGCGAGCCATTCC+TGG + Chr1:3521933-3521952 None:intergenic 55.0%
GCACCAAGTAGTTCAGCCAG+TGG - Chr1:3523549-3523568 MsG0180000264.01.T01:intron 55.0%
GGTAGGTCGTTGGGATTCAC+AGG + Chr1:3522852-3522871 None:intergenic 55.0%
GGTCCAATAGGGTACACAGC+CGG + Chr1:3523343-3523362 None:intergenic 55.0%
GGTCCTTGTTGGGCTTTCGA+GGG - Chr1:3517212-3517231 MsG0180000264.01.T01:intron 55.0%
GGTGGACGGTCAATCACTTC+AGG - Chr1:3516919-3516938 MsG0180000264.01.T01:intron 55.0%
GTCCAATAGGGTACACAGCC+GGG + Chr1:3523342-3523361 None:intergenic 55.0%
GTCCCTTGTGGTAGGTCGTT+GGG + Chr1:3522861-3522880 None:intergenic 55.0%
TCAAGGGTTTGCCTCCTTGG+TGG + Chr1:3516995-3517014 None:intergenic 55.0%
TCACCCGTTCAAGCTTCAGG+TGG - Chr1:3516847-3516866 MsG0180000264.01.T01:intron 55.0%
TCAGGATTCACCTGCTCAGG+TGG - Chr1:3518213-3518232 MsG0180000264.01.T01:intron 55.0%
TCCACTCCGGATCTCAGATC+TGG - Chr1:3521711-3521730 MsG0180000264.01.T01:intron 55.0%
TCGTCTTCCCCATCGTTACC+AGG + Chr1:3516440-3516459 None:intergenic 55.0%
TGGTCCTTGTTGGGCTTTCG+AGG - Chr1:3517211-3517230 MsG0180000264.01.T01:intron 55.0%
! AGTGAGGCTAGCTGGAGAGA+GGG - Chr1:3519535-3519554 MsG0180000264.01.T01:intron 55.0%
! GACTCCCTTTGTGGCACTGA+TGG - Chr1:3522962-3522981 MsG0180000264.01.T01:intron 55.0%
! GCACCACTGGCTGAACTACT+TGG + Chr1:3523555-3523574 None:intergenic 55.0%
! GGACTTGGGTTTAGGGTGGA+CGG - Chr1:3516905-3516924 MsG0180000264.01.T01:intron 55.0%
! TCCAGATCTGAGATCCGGAG+TGG + Chr1:3521715-3521734 None:intergenic 55.0%
!! AGCTCAGCTCTGGGGTGATT+GGG - Chr1:3519610-3519629 MsG0180000264.01.T01:intron 55.0%
!! ATCTCTCTGGAGCTCAGCTC+TGG - Chr1:3519600-3519619 MsG0180000264.01.T01:intron 55.0%
!! TATCGCCAAGGCACCGCAAA+TGG + Chr1:3521510-3521529 None:intergenic 55.0%
!! TCTCTCTGGAGCTCAGCTCT+GGG - Chr1:3519601-3519620 MsG0180000264.01.T01:intron 55.0%
ACAGAGTGGTGGCTGCTGGA+GGG + Chr1:3523055-3523074 None:intergenic 60.0%
AGTGCACAGCAGGCAGGTCT+AGG + Chr1:3521468-3521487 None:intergenic 60.0%
CCATTGATACATGGCCGCCG+CGG + Chr1:3515533-3515552 None:intergenic 60.0%
CGGCGGCCATGTATCAATGG+CGG - Chr1:3515533-3515552 MsG0180000264.01.T01:CDS 60.0%
GCGGTCCTCATCTCACAAGC+CGG - Chr1:3520548-3520567 MsG0180000264.01.T01:intron 60.0%
GTAGACAGAGTGGTGGCTGC+TGG + Chr1:3523059-3523078 None:intergenic 60.0%
GTGCACAGCAGGCAGGTCTA+GGG + Chr1:3521467-3521486 None:intergenic 60.0%
GTGCGTGTGTGCGAGCACAT+GGG - Chr1:3516292-3516311 MsG0180000264.01.T01:CDS 60.0%
TGTGCGTGTGTGCGAGCACA+TGG - Chr1:3516291-3516310 MsG0180000264.01.T01:CDS 60.0%
! CAGTGAGGCTAGCTGGAGAG+AGG - Chr1:3519534-3519553 MsG0180000264.01.T01:intron 60.0%
!! CTCTCTGGAGCTCAGCTCTG+GGG - Chr1:3519602-3519621 MsG0180000264.01.T01:intron 60.0%
!! GAGCTCAGCTCTGGGGTGAT+TGG - Chr1:3519609-3519628 MsG0180000264.01.T01:intron 60.0%
!! GAGTGGGCCGAAGGTGTTGA+AGG - Chr1:3519424-3519443 MsG0180000264.01.T01:intron 60.0%
CCGCGGCGGCCATGTATCAA+TGG - Chr1:3515530-3515549 MsG0180000264.01.T01:CDS 65.0%
GACAGAGTGGTGGCTGCTGG+AGG + Chr1:3523056-3523075 None:intergenic 65.0%
GGGTCAGCAGAGTGGGCCGA+AGG - Chr1:3519415-3519434 MsG0180000264.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 3515433 3524055 3515433 ID=MsG0180000264.01;Name=MsG0180000264.01
Chr1 mRNA 3515433 3524055 3515433 ID=MsG0180000264.01.T01;Parent=MsG0180000264.01;Name=MsG0180000264.01.T01;_AED=0.43;_eAED=0.43;_QI=454|0.16|0.14|1|0.83|0.71|7|0|567
Chr1 exon 3523689 3524055 3523689 ID=MsG0180000264.01.T01:exon:5989;Parent=MsG0180000264.01.T01
Chr1 exon 3521778 3521981 3521778 ID=MsG0180000264.01.T01:exon:5990;Parent=MsG0180000264.01.T01
Chr1 exon 3521379 3521496 3521379 ID=MsG0180000264.01.T01:exon:5991;Parent=MsG0180000264.01.T01
Chr1 exon 3520582 3521276 3520582 ID=MsG0180000264.01.T01:exon:5992;Parent=MsG0180000264.01.T01
Chr1 exon 3517922 3518115 3517922 ID=MsG0180000264.01.T01:exon:5993;Parent=MsG0180000264.01.T01
Chr1 exon 3516041 3516362 3516041 ID=MsG0180000264.01.T01:exon:5994;Parent=MsG0180000264.01.T01
Chr1 exon 3515433 3515690 3515433 ID=MsG0180000264.01.T01:exon:5995;Parent=MsG0180000264.01.T01
Chr1 five_prime_UTR 3523689 3524055 3523689 ID=MsG0180000264.01.T01:five_prime_utr;Parent=MsG0180000264.01.T01
Chr1 five_prime_UTR 3521895 3521981 3521895 ID=MsG0180000264.01.T01:five_prime_utr;Parent=MsG0180000264.01.T01
Chr1 CDS 3521778 3521894 3521778 ID=MsG0180000264.01.T01:cds;Parent=MsG0180000264.01.T01
Chr1 CDS 3521379 3521496 3521379 ID=MsG0180000264.01.T01:cds;Parent=MsG0180000264.01.T01
Chr1 CDS 3520582 3521276 3520582 ID=MsG0180000264.01.T01:cds;Parent=MsG0180000264.01.T01
Chr1 CDS 3517922 3518115 3517922 ID=MsG0180000264.01.T01:cds;Parent=MsG0180000264.01.T01
Chr1 CDS 3516041 3516362 3516041 ID=MsG0180000264.01.T01:cds;Parent=MsG0180000264.01.T01
Chr1 CDS 3515433 3515690 3515433 ID=MsG0180000264.01.T01:cds;Parent=MsG0180000264.01.T01
Gene Sequence

>MsG0180000264.01.T01

ATGGCTCAGTACATAAATACTATTGGTCAACTTGAACCTTCTTATGTGATACAAAAGTTTTGGATGCTCAGAGAATCTACAACCTCACAAATTACTTGGAAAAGCTACATGAGAAGGGCAGGGATGACAATAAAGGAGTATGGTAAAATTCTAATAGAGCACAAGCCATCGGAGACGATTCAGATTCTCATTAGGCTTTGCACAGACGAGGGTGACAAAAGAGGACGTTCAAATGGTCAGGATTCACCTGCTCAGGTGGAGATTAACAATACCCTCTTAGAGTTGTATATATCCAACGAATTGAACTTTCCTTCAGTATCACAGTCTAATGAGGGTGCAGATTACCTTAACGTAGCATCAGAAAAAACATCAAAAATAAGTGCCCAAACCAATGGAACTATTGCTGATCAGAAAAGTTCCGAAAAGGAAAAGGGCCGTCTTGAAAGGCGTGAAAAGGGTCTACACATGCTTAAGAGTGCATGGCCTCCAGAGACAGAACATCCACTTTATGATGTTGATTTAGCTATTATACTGTGTGAAATGAATTCATTCAAAGATGGGCTTTTGTATTTGTATGAAAAGATGAAACTCTATAAGGAAGTAATCGCTTGCTATATGCAGGCGCATGATCACAAGGGATTAATTGCATGCTGCAAAAGACTGGGTGATTCAGTTAAAGGAGGGGATCCATCTCTTTGGGCGGATGTACTCAAATATTTCGGTGAGCTTGGAGAAGATTGCTCCAAAGAAGTAAAAGAAGTTTTGAATTACATTGAAAGGGATAATATTTTACCCCCCATAATTGTCCTTCAAACTCTGTCAAAAAACCCTTGCCTCACACTTTCAGTGATCAAGGATTACATTGCTCGGAAGCTTGAGCAGGAATCAAAGGTGATTGAGGAGGACCGACAAGCTATTGAAAAATATCAGGAAGACACACAGGCAATGAGGAAAGAGGTTCAAGATCTTAGGACAAATGCGAGGATTTTTCAGCTTAGCAAGTGCACAGCATGCACTTTCACCCTAGACCTGCCTGCTGTGCACTTCATGTGCATGCACTCATTCCATTTGCGGTGCCTTGGCGATAATGAAAAAGAATGCCCCGAGTGTGCCCCAGAATATAGAGATCTGCCAGAACCTATTCAAGCACCAGGTAGTAGTGTACCAATTCGTGGTCGGGATCTCGTTACCCCAGCTCAAGATAGATCAAGCCAATCTTACAAATTCTTACTCCAGCGTGTTAAAAGATTTTGTTCTGTTGATGGGATACTTATTAATAGCTTCCTAGAAATTGAAAAAGGTCCTATAGAAGCACTAACAGAAAAAGGAAGTGGCAACCCGGCTGTGTACCCTATTGGACCCATTATCCAAACAAGAACAGAATCTGGTAATAATGGTATGGAGTGTCTGTCATGGCTAGATAAAACAACTGCCTTGTTCAGTTTTAGAATGAATGCAGTTGTGCTGAGTGAAGGCCTTAAAGTGGGACTGAGGCCAAGAGTTAATAAGAATGGCATTGTCGAAAGGGAGGAAATTTCTAAATTGATCAAGTGTCTCATGGAAGGAGAAGAATGTGAGAAATTGCGCAATAATATGAAGCAATTGAAAGAAGCAGCTACTAATGCACTCAAAGAAGATGGGTCTTCTAGAACGACTATTTCTCAATTAGCACACATGTGGAGAAATTTGGTGCATGAAAACTAG
Protein sequence

>MsG0180000264.01.T01

MAQYINTIGQLEPSYVIQKFWMLRESTTSQITWKSYMRRAGMTIKEYGKILIEHKPSETIQILIRLCTDEGDKRGRSNGQDSPAQVEINNTLLELYISNELNFPSVSQSNEGADYLNVASEKTSKISAQTNGTIADQKSSEKEKGRLERREKGLHMLKSAWPPETEHPLYDVDLAIILCEMNSFKDGLLYLYEKMKLYKEVIACYMQAHDHKGLIACCKRLGDSVKGGDPSLWADVLKYFGELGEDCSKEVKEVLNYIERDNILPPIIVLQTLSKNPCLTLSVIKDYIARKLEQESKVIEEDRQAIEKYQEDTQAMRKEVQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPECAPEYRDLPEPIQAPGSSVPIRGRDLVTPAQDRSSQSYKFLLQRVKRFCSVDGILINSFLEIEKGPIEALTEKGSGNPAVYPIGPIIQTRTESGNNGMECLSWLDKTTALFSFRMNAVVLSEGLKVGLRPRVNKNGIVEREEISKLIKCLMEGEECEKLRNNMKQLKEAATNALKEDGSSRTTISQLAHMWRNLVHEN*