AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024418.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024418.01.T01 MTR_2g078470 74.113 282 73 0 30 311 79 360 5.68e-144 412
MsG0580024418.01.T01 MTR_2g078470 73.448 290 77 0 23 312 3 292 4.65e-140 402
MsG0580024418.01.T01 MTR_2g078470 73.568 227 60 0 30 256 148 374 6.80e-111 327
MsG0580024418.01.T01 MTR_2g078470 44.118 136 30 1 29 118 239 374 1.91e-22 97.1
MsG0580024418.01.T01 MTR_6g043150 70.103 291 87 0 22 312 2 292 1.84e-140 401
MsG0580024418.01.T01 MTR_6g043150 68.952 248 77 0 30 277 79 326 1.28e-114 335
MsG0580024418.01.T01 MTR_6g043150 61.386 202 55 1 29 207 124 325 1.57e-72 228
MsG0580024418.01.T01 MTR_5g010840 62.847 288 92 1 10 282 92 379 3.15e-114 337
MsG0580024418.01.T01 MTR_5g010840 63.362 232 70 1 96 312 109 340 1.04e-92 281
MsG0580024418.01.T01 MTR_8g080860 43.939 264 148 0 18 281 8 271 1.15e-67 214
MsG0580024418.01.T01 MTR_8g080860 38.559 236 122 1 99 311 20 255 2.55e-46 159
MsG0580024418.01.T01 MTR_8g080860 33.333 189 124 1 144 330 19 207 8.91e-23 96.7
MsG0580024418.01.T01 MTR_8g080860 43.939 264 148 0 18 281 4 267 1.57e-67 213
MsG0580024418.01.T01 MTR_8g080860 38.559 236 122 1 99 311 16 251 3.59e-46 158
MsG0580024418.01.T01 MTR_8g080860 33.333 189 124 1 144 330 15 203 1.05e-22 96.3
MsG0580024418.01.T01 MTR_8g080350 46.429 252 118 3 57 293 86 335 9.33e-60 197
MsG0580024418.01.T01 MTR_8g080350 46.729 214 99 2 26 224 122 335 3.50e-52 177
MsG0580024418.01.T01 MTR_8g080350 52.406 187 86 2 126 311 86 270 7.19e-52 176
MsG0580024418.01.T01 MTR_8g080350 55.085 118 51 1 195 312 86 201 5.75e-32 124
MsG0580024418.01.T01 MTR_8g080350 40.667 150 74 2 26 160 191 340 7.03e-24 101
MsG0580024418.01.T01 MTR_4g107460 41.772 237 137 1 32 267 11 247 1.19e-49 169
MsG0580024418.01.T01 MTR_4g107460 41.860 215 124 1 99 312 9 223 1.05e-44 156
MsG0580024418.01.T01 MTR_4g107460 57.692 78 32 1 236 312 8 85 1.40e-19 88.6
MsG0580024418.01.T01 MTR_4g107460 38.235 102 63 0 28 129 146 247 3.13e-12 67.0
MsG0580024418.01.T01 MTR_8g095240 36.422 313 163 3 34 311 8 319 1.53e-49 171
MsG0580024418.01.T01 MTR_8g095240 32.660 297 120 4 96 312 1 297 3.61e-35 132
MsG0580024418.01.T01 MTR_8g095240 33.704 270 143 5 26 283 92 337 3.49e-32 124
MsG0580024418.01.T01 MTR_8g095240 32.353 238 137 1 1 214 100 337 7.04e-27 110
MsG0580024418.01.T01 MTR_8g088930 47.000 200 105 1 18 217 1 199 3.21e-47 169
MsG0580024418.01.T01 MTR_8g088930 47.340 188 98 1 99 286 13 199 1.90e-44 162
MsG0580024418.01.T01 MTR_8g088930 47.917 144 75 0 168 311 13 156 3.85e-35 135
MsG0580024418.01.T01 MTR_8g088930 47.000 200 105 1 18 217 1 199 3.40e-47 169
MsG0580024418.01.T01 MTR_8g088930 47.340 188 98 1 99 286 13 199 2.00e-44 161
MsG0580024418.01.T01 MTR_8g088930 47.917 144 75 0 168 311 13 156 3.87e-35 135
MsG0580024418.01.T01 MTR_8g088930 47.000 200 105 1 18 217 1 199 1.16e-46 169
MsG0580024418.01.T01 MTR_8g088930 47.340 188 98 1 99 286 13 199 5.66e-44 161
MsG0580024418.01.T01 MTR_8g088930 47.917 144 75 0 168 311 13 156 5.40e-35 135
MsG0580024418.01.T01 MTR_8g088930 47.000 200 105 1 18 217 1 199 1.18e-46 169
MsG0580024418.01.T01 MTR_8g088930 47.340 188 98 1 99 286 13 199 5.91e-44 161
MsG0580024418.01.T01 MTR_8g088930 47.917 144 75 0 168 311 13 156 5.55e-35 135
MsG0580024418.01.T01 MTR_8g092090 37.705 244 137 1 24 267 3 231 2.30e-43 150
MsG0580024418.01.T01 MTR_8g092090 36.889 225 134 1 99 315 9 233 6.03e-39 138
MsG0580024418.01.T01 MTR_8g092090 35.185 162 97 1 168 321 9 170 5.49e-23 96.3
MsG0580024418.01.T01 MTR_1g050740 37.712 236 143 3 93 328 55 286 2.40e-36 139
MsG0580024418.01.T01 MTR_1g050740 40.107 187 111 1 29 215 60 245 2.61e-31 124
MsG0580024418.01.T01 MTR_8g080340 40.000 195 70 3 18 212 8 155 1.98e-34 124
MsG0580024418.01.T01 MTR_8g080340 44.526 137 52 2 168 281 20 155 2.82e-26 103
MsG0580024418.01.T01 MTR_8g080340 38.889 108 42 2 237 321 20 126 2.57e-11 62.0
MsG0580024418.01.T01 MTR_8g039100 40.642 187 110 1 99 285 53 238 1.48e-33 131
MsG0580024418.01.T01 MTR_8g039100 38.889 198 119 2 20 216 42 238 1.32e-31 125
MsG0580024418.01.T01 MTR_8g039100 38.194 144 89 0 168 311 53 196 5.55e-24 103
MsG0580024418.01.T01 MTR_8g039100 30.588 170 118 0 143 312 51 220 3.36e-17 83.2
MsG0580024418.01.T01 MTR_8g039100 31.383 188 118 2 29 215 98 275 8.97e-16 79.0
MsG0580024418.01.T01 MTR_3g073100 35.714 224 116 3 23 245 50 246 5.87e-32 126
MsG0580024418.01.T01 MTR_3g073100 39.899 198 114 3 72 268 34 227 1.23e-31 125
MsG0580024418.01.T01 MTR_3g073100 34.184 196 101 3 141 312 34 225 4.14e-27 112
MsG0580024418.01.T01 MTR_3g097260 40.805 174 103 0 27 200 52 225 9.43e-32 125
MsG0580024418.01.T01 MTR_3g097260 36.869 198 117 1 100 289 56 253 1.88e-28 116
MsG0580024418.01.T01 MTR_3g097260 38.194 144 89 0 169 312 56 199 5.08e-21 94.4
MsG0580024418.01.T01 MTR_3g097260 34.132 167 110 0 144 310 54 220 1.63e-18 87.0
MsG0580024418.01.T01 MTR_1g062740 35.885 209 131 2 96 302 48 255 2.05e-31 125
MsG0580024418.01.T01 MTR_1g062740 33.054 239 154 4 23 257 44 280 2.80e-31 124
MsG0580024418.01.T01 MTR_1g062740 36.257 171 86 1 165 312 48 218 1.48e-24 105
MsG0580024418.01.T01 MTR_8g095170 36.649 191 119 2 17 206 17 206 3.15e-29 118
MsG0580024418.01.T01 MTR_8g095170 37.143 210 124 4 85 289 18 224 5.62e-28 114
MsG0580024418.01.T01 MTR_8g095170 35.185 162 104 1 144 304 29 190 2.94e-22 97.8
MsG0580024418.01.T01 MTR_8g095170 37.415 147 91 1 166 311 28 174 3.08e-22 97.8
MsG0580024418.01.T01 MTR_8g095170 36.649 191 119 2 17 206 17 206 7.31e-29 117
MsG0580024418.01.T01 MTR_8g095170 37.143 210 124 4 85 289 18 224 1.45e-27 113
MsG0580024418.01.T01 MTR_8g095170 37.415 147 91 1 166 311 28 174 6.17e-22 97.1
MsG0580024418.01.T01 MTR_8g095170 35.185 162 104 1 144 304 29 190 7.64e-22 97.1
MsG0580024418.01.T01 MTR_7g089950 40.000 170 102 0 99 268 71 240 3.27e-27 112
MsG0580024418.01.T01 MTR_7g089950 38.384 198 99 2 27 224 68 242 2.10e-26 110
MsG0580024418.01.T01 MTR_7g089950 38.095 168 81 1 168 312 71 238 1.22e-25 108
MsG0580024418.01.T01 MTR_3g014650 36.410 195 111 2 93 287 83 264 2.65e-26 110
MsG0580024418.01.T01 MTR_3g014650 36.458 192 109 2 27 218 86 264 6.71e-26 108
MsG0580024418.01.T01 MTR_3g014650 32.099 162 99 1 162 312 83 244 4.10e-16 79.7
MsG0580024418.01.T01 MTR_5g459450 35.359 181 94 1 29 209 68 225 3.42e-26 109
MsG0580024418.01.T01 MTR_5g459450 36.313 179 91 1 100 278 70 225 3.58e-26 109
MsG0580024418.01.T01 MTR_5g459450 35.838 173 102 2 138 308 44 209 1.64e-24 104
MsG0580024418.01.T01 MTR_5g459450 32.530 166 112 0 143 308 67 232 1.92e-20 92.8
MsG0580024418.01.T01 MTR_5g459450 30.000 140 98 0 31 170 93 232 1.71e-14 75.1
MsG0580024418.01.T01 MTR_5g459450 45.946 74 40 0 238 311 70 143 1.08e-13 72.4
MsG0580024418.01.T01 MTR_8g092410 30.100 299 170 8 11 281 8 295 2.88e-25 105
MsG0580024418.01.T01 MTR_8g092410 38.060 134 75 3 24 149 173 306 3.01e-12 67.4
MsG0580024418.01.T01 MTR_8g092410 25.000 260 152 7 92 308 17 276 5.22e-11 63.5
MsG0580024418.01.T01 MTR_8g080310 31.188 202 93 2 68 269 2 157 3.67e-23 94.4
MsG0580024418.01.T01 MTR_8g080310 33.121 157 105 0 44 200 1 157 7.18e-21 88.2
MsG0580024418.01.T01 MTR_8g080310 31.081 148 102 0 164 311 6 153 6.62e-18 80.1
MsG0580024418.01.T01 MTR_8g080310 30.769 156 108 0 137 292 2 157 5.71e-17 77.4
MsG0580024418.01.T01 MTR_8g080310 33.019 106 71 0 26 131 52 157 5.97e-12 63.5
MsG0580024418.01.T01 MTR_5g058920 29.707 239 144 2 99 337 197 411 2.50e-21 94.7
MsG0580024418.01.T01 MTR_5g058920 35.754 179 115 0 25 203 192 370 4.57e-20 90.9
MsG0580024418.01.T01 MTR_5g058920 34.783 161 105 0 151 311 180 340 2.37e-17 82.8
MsG0580024418.01.T01 MTR_7g451440 37.989 179 109 2 26 203 188 365 3.55e-21 94.4
MsG0580024418.01.T01 MTR_7g451440 29.362 235 140 2 100 334 193 401 4.59e-21 94.0
MsG0580024418.01.T01 MTR_7g451440 30.159 189 123 1 122 310 178 357 1.34e-14 74.7
MsG0580024418.01.T01 MTR_7g451440 27.397 219 113 2 54 272 193 365 1.52e-14 74.7
MsG0580024418.01.T01 MTR_8g007500 35.165 182 118 0 22 203 189 370 1.34e-20 92.4
MsG0580024418.01.T01 MTR_8g007500 33.908 174 115 0 99 272 197 370 5.92e-20 90.9
MsG0580024418.01.T01 MTR_8g007500 31.548 168 115 0 143 310 195 362 8.15e-16 78.6
MsG0580024418.01.T01 MTR_8g007500 33.129 163 107 1 151 311 178 340 3.14e-14 73.6
MsG0580024418.01.T01 MTR_8g007500 30.682 176 122 0 74 249 195 370 1.56e-13 71.6
MsG0580024418.01.T01 MTR_4g099180 33.333 168 112 0 120 287 170 337 7.14e-20 90.1
MsG0580024418.01.T01 MTR_4g099180 36.872 179 111 2 26 203 168 345 2.68e-19 88.6
MsG0580024418.01.T01 MTR_4g099180 33.929 168 111 0 51 218 170 337 9.59e-18 84.0
MsG0580024418.01.T01 MTR_4g099180 32.778 180 119 1 132 311 138 315 9.00e-17 81.3
MsG0580024418.01.T01 MTR_4g099180 37.008 127 78 2 24 149 212 337 2.15e-12 68.2
MsG0580024418.01.T01 MTR_3g072650 30.263 228 134 3 99 324 185 389 1.78e-18 85.9
MsG0580024418.01.T01 MTR_3g072650 35.233 193 119 3 26 217 181 368 7.73e-18 84.0
MsG0580024418.01.T01 MTR_3g072650 35.570 149 96 0 163 311 180 328 6.00e-17 81.6
MsG0580024418.01.T01 MTR_3g072650 30.481 187 130 0 63 249 172 358 2.03e-15 77.0
MsG0580024418.01.T01 MTR_3g072650 32.338 201 112 2 99 298 185 362 5.53e-18 84.7
MsG0580024418.01.T01 MTR_3g072650 35.233 193 119 3 26 217 181 368 1.28e-17 83.6
MsG0580024418.01.T01 MTR_3g072650 35.570 149 96 0 163 311 180 328 1.03e-16 80.9
MsG0580024418.01.T01 MTR_3g072650 30.481 187 130 0 63 249 172 358 3.47e-15 76.3
MsG0580024418.01.T01 MTR_3g023310 28.485 165 107 2 90 243 10 174 6.18e-14 69.7
MsG0580024418.01.T01 MTR_3g023315 67.442 43 14 0 103 145 12 54 3.87e-12 61.6
MsG0580024418.01.T01 MTR_3g023315 60.465 43 17 0 241 283 12 54 6.81e-11 58.2
MsG0580024418.01.T01 MTR_4g099180 33.784 148 96 1 132 279 138 283 4.47e-12 66.2
MsG0580024418.01.T01 MTR_4g099180 39.167 120 71 2 26 144 168 286 6.23e-11 62.8
MsG0580024418.01.T01 MTR_4g099180 33.784 148 96 1 132 279 138 283 5.23e-12 66.2
MsG0580024418.01.T01 MTR_4g099180 39.167 120 71 2 26 144 168 286 8.43e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024418.01.T01 AT1G10900 39.791 191 114 1 27 217 8 197 1.01e-35 137
MsG0580024418.01.T01 AT1G10900 37.968 187 115 1 100 286 12 197 1.22e-31 125
MsG0580024418.01.T01 AT1G10900 38.462 143 88 0 169 311 12 154 6.21e-24 103
MsG0580024418.01.T01 AT1G10900 33.929 168 111 0 144 311 10 177 1.21e-20 93.6
MsG0580024418.01.T01 AT1G10900 39.791 191 114 1 27 217 8 197 1.01e-35 137
MsG0580024418.01.T01 AT1G10900 37.968 187 115 1 100 286 12 197 1.22e-31 125
MsG0580024418.01.T01 AT1G10900 38.462 143 88 0 169 311 12 154 6.21e-24 103
MsG0580024418.01.T01 AT1G10900 33.929 168 111 0 144 311 10 177 1.21e-20 93.6
MsG0580024418.01.T01 AT1G10900 39.791 191 114 1 27 217 8 197 1.01e-35 137
MsG0580024418.01.T01 AT1G10900 37.968 187 115 1 100 286 12 197 1.22e-31 125
MsG0580024418.01.T01 AT1G10900 38.462 143 88 0 169 311 12 154 6.21e-24 103
MsG0580024418.01.T01 AT1G10900 33.929 168 111 0 144 311 10 177 1.21e-20 93.6
MsG0580024418.01.T01 AT1G60890 37.931 203 122 2 29 231 22 220 2.55e-35 136
MsG0580024418.01.T01 AT1G60890 38.830 188 114 1 99 286 23 209 3.61e-34 133
MsG0580024418.01.T01 AT1G60890 38.889 144 88 0 168 311 23 166 4.90e-27 112
MsG0580024418.01.T01 AT1G60890 32.065 184 124 1 128 311 7 189 1.99e-20 92.8
MsG0580024418.01.T01 AT1G60890 36.967 211 129 2 21 231 2 208 2.88e-35 136
MsG0580024418.01.T01 AT1G60890 38.830 188 114 1 99 286 11 197 3.94e-34 133
MsG0580024418.01.T01 AT1G60890 38.889 144 88 0 168 311 11 154 5.34e-27 112
MsG0580024418.01.T01 AT1G60890 32.571 175 118 0 137 311 3 177 2.64e-20 92.4
MsG0580024418.01.T01 AT1G21980 40.805 174 103 0 27 200 73 246 6.36e-34 132
MsG0580024418.01.T01 AT1G21980 41.765 170 99 0 100 269 77 246 5.28e-33 129
MsG0580024418.01.T01 AT1G21980 41.958 143 83 0 169 311 77 219 1.56e-29 119
MsG0580024418.01.T01 AT1G21980 32.203 177 120 0 144 320 75 251 1.01e-21 96.7
MsG0580024418.01.T01 AT3G07960 38.462 195 119 1 93 287 21 214 1.20e-33 131
MsG0580024418.01.T01 AT3G07960 37.500 192 119 1 27 218 24 214 2.49e-32 127
MsG0580024418.01.T01 AT3G07960 36.000 150 96 0 162 311 21 170 5.47e-24 103
MsG0580024418.01.T01 AT3G07960 33.728 169 112 0 144 312 26 194 1.24e-22 99.4
MsG0580024418.01.T01 AT3G07960 38.462 195 119 1 93 287 21 214 1.35e-33 130
MsG0580024418.01.T01 AT3G07960 37.500 192 119 1 27 218 24 214 2.75e-32 127
MsG0580024418.01.T01 AT3G07960 36.000 150 96 0 162 311 21 170 6.57e-24 102
MsG0580024418.01.T01 AT3G07960 33.728 169 112 0 144 312 26 194 1.32e-22 99.0
MsG0580024418.01.T01 AT3G07960 38.462 195 119 1 93 287 21 214 1.35e-33 130
MsG0580024418.01.T01 AT3G07960 37.500 192 119 1 27 218 24 214 2.75e-32 127
MsG0580024418.01.T01 AT3G07960 36.000 150 96 0 162 311 21 170 6.57e-24 102
MsG0580024418.01.T01 AT3G07960 33.728 169 112 0 144 312 26 194 1.32e-22 99.0
MsG0580024418.01.T01 AT3G07960 38.462 195 119 1 93 287 21 214 2.94e-33 130
MsG0580024418.01.T01 AT3G07960 37.500 192 119 1 27 218 24 214 5.80e-32 126
MsG0580024418.01.T01 AT3G07960 36.000 150 96 0 162 311 21 170 8.70e-24 102
MsG0580024418.01.T01 AT3G07960 33.728 169 112 0 144 312 26 194 2.44e-22 98.6
MsG0580024418.01.T01 AT3G09920 31.164 292 179 6 20 301 41 320 4.28e-32 127
MsG0580024418.01.T01 AT3G09920 34.450 209 134 2 96 302 50 257 2.66e-28 116
MsG0580024418.01.T01 AT3G09920 32.804 189 125 1 124 312 34 220 1.18e-24 105
MsG0580024418.01.T01 AT3G09920 31.164 292 179 6 20 301 41 320 4.28e-32 127
MsG0580024418.01.T01 AT3G09920 34.450 209 134 2 96 302 50 257 2.66e-28 116
MsG0580024418.01.T01 AT3G09920 32.804 189 125 1 124 312 34 220 1.18e-24 105
MsG0580024418.01.T01 AT3G09920 31.164 292 179 6 20 301 41 320 4.28e-32 127
MsG0580024418.01.T01 AT3G09920 34.450 209 134 2 96 302 50 257 2.66e-28 116
MsG0580024418.01.T01 AT3G09920 32.804 189 125 1 124 312 34 220 1.18e-24 105
MsG0580024418.01.T01 AT3G09920 31.164 292 179 6 20 301 41 320 4.28e-32 127
MsG0580024418.01.T01 AT3G09920 34.450 209 134 2 96 302 50 257 2.66e-28 116
MsG0580024418.01.T01 AT3G09920 32.804 189 125 1 124 312 34 220 1.18e-24 105
MsG0580024418.01.T01 AT3G56960 34.322 236 146 3 93 328 66 292 1.43e-31 125
MsG0580024418.01.T01 AT3G56960 36.170 188 119 1 29 216 71 257 2.02e-28 116
MsG0580024418.01.T01 AT3G56960 34.322 236 146 3 93 328 66 292 1.43e-31 125
MsG0580024418.01.T01 AT3G56960 36.170 188 119 1 29 216 71 257 2.02e-28 116
MsG0580024418.01.T01 AT1G77740 37.079 178 112 0 27 204 74 251 1.21e-30 122
MsG0580024418.01.T01 AT1G77740 38.235 170 105 0 100 269 78 247 2.03e-29 119
MsG0580024418.01.T01 AT1G77740 34.731 167 86 1 169 312 78 244 4.67e-26 109
MsG0580024418.01.T01 AT1G77740 37.079 178 112 0 27 204 74 251 1.21e-30 122
MsG0580024418.01.T01 AT1G77740 38.235 170 105 0 100 269 78 247 2.03e-29 119
MsG0580024418.01.T01 AT1G77740 34.731 167 86 1 169 312 78 244 4.67e-26 109
MsG0580024418.01.T01 AT2G41210 36.788 193 121 1 93 285 64 255 4.82e-30 121
MsG0580024418.01.T01 AT2G41210 38.298 188 115 1 29 216 69 255 1.29e-29 120
MsG0580024418.01.T01 AT2G41210 36.782 174 87 1 162 312 64 237 3.38e-27 112
MsG0580024418.01.T01 AT2G41210 42.045 88 50 1 224 311 58 144 3.90e-14 73.9
MsG0580024418.01.T01 AT2G26420 37.374 198 122 2 100 296 54 250 5.25e-28 115
MsG0580024418.01.T01 AT2G26420 35.673 171 108 1 141 311 28 196 1.41e-25 108
MsG0580024418.01.T01 AT2G26420 36.126 191 120 2 23 212 46 235 8.30e-25 105
MsG0580024418.01.T01 AT2G26420 37.374 198 122 2 100 296 54 250 7.64e-28 114
MsG0580024418.01.T01 AT2G26420 35.673 171 108 1 141 311 28 196 1.97e-25 107
MsG0580024418.01.T01 AT2G26420 36.126 191 120 2 23 212 46 235 1.11e-24 105
MsG0580024418.01.T01 AT2G26420 37.374 198 122 2 100 296 54 250 7.64e-28 114
MsG0580024418.01.T01 AT2G26420 35.673 171 108 1 141 311 28 196 1.97e-25 107
MsG0580024418.01.T01 AT2G26420 36.126 191 120 2 23 212 46 235 1.11e-24 105
MsG0580024418.01.T01 AT2G35170 29.952 207 144 1 125 331 229 434 6.96e-20 90.9
MsG0580024418.01.T01 AT2G35170 34.359 195 126 2 26 219 222 415 2.23e-19 89.4
MsG0580024418.01.T01 AT2G35170 30.508 177 122 1 135 311 194 369 8.10e-17 81.6
MsG0580024418.01.T01 AT2G35170 33.939 165 109 0 57 221 230 394 3.33e-16 79.7
MsG0580024418.01.T01 AT2G35170 26.710 307 191 6 2 277 127 430 1.22e-14 75.1
MsG0580024418.01.T01 AT2G35170 30.387 181 124 1 132 310 211 391 6.14e-12 67.0
MsG0580024418.01.T01 AT4G17080 33.333 192 105 1 99 290 257 425 8.36e-20 90.5
MsG0580024418.01.T01 AT4G17080 37.430 179 110 2 26 203 253 430 1.17e-19 90.1
MsG0580024418.01.T01 AT4G17080 35.417 144 93 0 168 311 257 400 1.98e-16 80.5
MsG0580024418.01.T01 AT4G17080 27.715 267 162 3 14 272 187 430 3.91e-16 79.7
MsG0580024418.01.T01 AT4G17080 30.723 166 115 0 144 309 256 421 1.54e-12 68.6
MsG0580024418.01.T01 AT1G21920 28.936 235 143 2 99 333 174 384 1.78e-18 86.3
MsG0580024418.01.T01 AT1G21920 35.196 179 114 2 26 203 170 347 7.54e-17 81.3
MsG0580024418.01.T01 AT1G21920 35.333 150 97 0 162 311 168 317 1.24e-16 80.9
MsG0580024418.01.T01 AT1G21920 32.597 181 122 0 42 222 163 343 1.36e-15 77.8
MsG0580024418.01.T01 AT1G77660 30.131 229 159 1 105 333 161 388 2.16e-18 85.9
MsG0580024418.01.T01 AT1G77660 34.444 180 116 2 26 204 174 352 2.81e-16 79.7
MsG0580024418.01.T01 AT1G77660 31.429 210 135 2 22 222 138 347 5.29e-15 75.9
MsG0580024418.01.T01 AT1G21920 32.124 193 108 1 99 291 174 343 3.53e-18 84.7
MsG0580024418.01.T01 AT1G21920 35.196 179 114 2 26 203 170 347 2.47e-17 82.4
MsG0580024418.01.T01 AT1G21920 35.333 150 97 0 162 311 168 317 4.99e-17 81.6
MsG0580024418.01.T01 AT1G21920 32.597 181 122 0 42 222 163 343 3.10e-16 79.3

Find 108 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACGAGGGTGATTGGGTTGA+TGG 0.301936 5:-4646836 MsG0580024418.01.T01:CDS
CATCCCCGTTTGAATTTGTA+TGG 0.317731 5:+4646516 None:intergenic
GAGAAATATACGAGGGTGAT+TGG 0.320107 5:-4646844 MsG0580024418.01.T01:CDS
CTTCCCCATTTGAATTTGTA+TGG 0.323270 5:+4646309 None:intergenic
GTGATTGGGTTGATGGTAAA+AGG 0.336593 5:-4646415 MsG0580024418.01.T01:CDS
TTCTCTGGGAATTCCTTTCA+TGG 0.346086 5:-4646341 MsG0580024418.01.T01:CDS
GAACAATATATGAGGGTGAT+TGG 0.359146 5:-4646430 MsG0580024418.01.T01:CDS
GAACAATATATGAAGGTGAT+TGG 0.373787 5:-4646637 MsG0580024418.01.T01:CDS
TATGAAGGTGATTGGGTTGA+TGG 0.396586 5:-4646629 MsG0580024418.01.T01:CDS
TGGGTTGATGGAAGCAGGGC+AGG 0.399450 5:-4646617 MsG0580024418.01.T01:CDS
TACCAGGGTGACTGGGTTGA+TGG 0.406579 5:-4647043 MsG0580024418.01.T01:CDS
GAACAATATACCAGGGTGAC+TGG 0.408003 5:-4647051 MsG0580024418.01.T01:CDS
GGCATCCATACAAATTCAAA+TGG 0.416878 5:-4646314 MsG0580024418.01.T01:CDS
TATGAGGGTGATTGGGTTGA+TGG 0.422414 5:-4646422 MsG0580024418.01.T01:CDS
CCAATGTAGACATCGCCATT+TGG 0.439353 5:+4647127 None:intergenic
GTCAGATGGAACAATATATG+AGG 0.442982 5:-4646438 MsG0580024418.01.T01:CDS
TGGGTTGATGGAAGTAGGAC+AGG 0.444196 5:-4646824 MsG0580024418.01.T01:CDS
CCCTCAAAAGTTGTTCCTGA+TGG 0.450586 5:+4646575 None:intergenic
GTGATTGGGTTGATGGAAGC+AGG 0.451169 5:-4646622 MsG0580024418.01.T01:CDS
CCCTCAAAAGTTGTTCCTGA+TGG 0.451183 5:+4646782 None:intergenic
CCCTCAAAACTTGCTCCTGA+TGG 0.455757 5:+4646368 None:intergenic
GGAGATGAAGATGTAGAGCT+AGG 0.456737 5:-4645452 MsG0580024418.01.T01:CDS
GCATCCTTACAAAATCCAAC+GGG 0.457759 5:-4646727 MsG0580024418.01.T01:CDS
ATGTGTACTTTCCCTTGCCA+TGG 0.461353 5:+4646669 None:intergenic
AGAAATATACGAGGGTGATT+GGG 0.463175 5:-4646843 MsG0580024418.01.T01:CDS
GGAAAGTACACATGGTCAAA+TGG 0.467614 5:-4646659 MsG0580024418.01.T01:CDS
GCACCCTTACAAAATCCAAT+GGG 0.467821 5:-4646934 MsG0580024418.01.T01:CDS
CCCTCAAAACTTGCTCCTGA+TGG 0.474150 5:+4646989 None:intergenic
GGAAGGTACACATGGTCAAA+TGG 0.475967 5:-4647073 MsG0580024418.01.T01:CDS
GGCACCCATACAAATTCAAA+CGG 0.480555 5:-4646521 MsG0580024418.01.T01:CDS
AAGGGTGCCGTGACCATGAC+GGG 0.483261 5:+4646949 None:intergenic
GGAAGAATCATATATCCATC+AGG 0.493374 5:-4646383 MsG0580024418.01.T01:CDS
GCATCCATACAAATTCAAAT+GGG 0.493721 5:-4646313 MsG0580024418.01.T01:CDS
ATTACCTTGCATTGTCCACT+AGG 0.498174 5:+4647243 None:intergenic
GGGAATTCCTTTCATGGTCA+CGG 0.501081 5:-4646335 MsG0580024418.01.T01:CDS
AAGGATGCCGTGACCATCAC+GGG 0.506087 5:+4646742 None:intergenic
GCACCCATACAAATTCAAAC+GGG 0.510990 5:-4646520 MsG0580024418.01.T01:CDS
CCAAATGGCGATGTCTACAT+TGG 0.511980 5:-4647127 MsG0580024418.01.T01:CDS
ACGTGATCAAATGTTTCCTC+TGG 0.512740 5:-4647303 None:intergenic
GGACGGATCATATATCCATC+AGG 0.513489 5:-4646590 MsG0580024418.01.T01:CDS
ATGTGAACTTTCCCTTGCCA+TGG 0.514104 5:+4646462 None:intergenic
TGTGTACTTTCCCTTGCCAT+GGG 0.516198 5:+4646670 None:intergenic
AACAATATATGAAGGTGATT+GGG 0.516259 5:-4646636 MsG0580024418.01.T01:CDS
GGACGGATCATATTTCCATC+AGG 0.517140 5:-4646797 MsG0580024418.01.T01:CDS
ATCAAATGTTTCCTCTGGCG+TGG 0.517405 5:-4647298 None:intergenic
GATGGAAGCAGGGCAGGGAA+TGG 0.522101 5:-4646611 MsG0580024418.01.T01:CDS
AACAATATATGAGGGTGATT+GGG 0.524240 5:-4646429 MsG0580024418.01.T01:CDS
GGGAATTCCCGTGATGGTCA+CGG 0.539689 5:-4646749 MsG0580024418.01.T01:CDS
TGGGTTGATGGTAAAAGGAA+AGG 0.541242 5:-4646410 MsG0580024418.01.T01:CDS
TTCTCTATGAATTCCTTCCA+TGG 0.541513 5:-4646548 MsG0580024418.01.T01:CDS
AGGAATTCCCGTCATGGTCA+CGG 0.548090 5:-4646956 MsG0580024418.01.T01:CDS
GAAGCAGGGCAGGGAATGGA+CGG 0.550737 5:-4646607 MsG0580024418.01.T01:CDS
TTCTTTAGGAATTCCCGTCA+TGG 0.553202 5:-4646962 MsG0580024418.01.T01:CDS
GGGCGGATGATATATCCATC+AGG 0.554981 5:-4647004 MsG0580024418.01.T01:CDS
TCCAATGGGGATGTCTACAT+TGG 0.559068 5:-4646920 MsG0580024418.01.T01:CDS
AACAATATACCAGGGTGACT+GGG 0.559210 5:-4647050 MsG0580024418.01.T01:CDS
GGAAAGTTCACATGGTCAGA+TGG 0.561789 5:-4646452 MsG0580024418.01.T01:CDS
TCAAATGGAACAATATATGA+AGG 0.561873 5:-4646644 MsG0580024418.01.T01:CDS
GCCAAGGGAAAACGTATGCA+TGG 0.563152 5:-4647100 MsG0580024418.01.T01:CDS
TTCCATCAACCCAGTCACCC+TGG 0.563588 5:+4647041 None:intergenic
GTGATTGGGTTGATGGAAGT+AGG 0.563992 5:-4646829 MsG0580024418.01.T01:CDS
TACATTGGTAACTTCAAGAG+TGG 0.564708 5:-4646698 MsG0580024418.01.T01:CDS
GGGTTGATGGTAAAAGGAAA+GGG 0.564915 5:-4646409 MsG0580024418.01.T01:CDS
GTCAAATGGAACAATATACC+AGG 0.566493 5:-4647059 MsG0580024418.01.T01:CDS
GGAAAGTACACATGGTCAGA+TGG 0.566527 5:-4646866 MsG0580024418.01.T01:CDS
TGTGAACTTTCCCTTGCCAT+GGG 0.567031 5:+4646463 None:intergenic
ATGTGTACTTTCCCTTGCCG+TGG 0.568930 5:+4646876 None:intergenic
ATCCCCGTTTGAATTTGTAT+GGG 0.571408 5:+4646517 None:intergenic
ACCAATGTAGACATCCCCAT+TGG 0.574302 5:+4646919 None:intergenic
GGGAAAACGTATGCATGGCA+AGG 0.577918 5:-4647095 MsG0580024418.01.T01:CDS
ATGAATTCCTTCCATGGTCA+CGG 0.581271 5:-4646542 MsG0580024418.01.T01:CDS
GGGTTGATGGAAGCAGGGCA+GGG 0.581422 5:-4646616 MsG0580024418.01.T01:CDS
ATCTCTGGGAATTCCCGTGA+TGG 0.583881 5:-4646755 MsG0580024418.01.T01:CDS
TGTTCCTAGTGGACAATGCA+AGG 0.587173 5:-4647247 MsG0580024418.01.T01:intron
GGCACCCTTACAAAATCCAA+TGG 0.587279 5:-4646935 MsG0580024418.01.T01:CDS
ATGGATGCCGTGACCATGAA+AGG 0.589956 5:+4646328 None:intergenic
GAAGTAGGACAGGGAAAGGA+CGG 0.592854 5:-4646814 MsG0580024418.01.T01:CDS
ACCAATGTAGATATCCCCGT+TGG 0.593680 5:+4646712 None:intergenic
TCAAATGGGGAAGTCTACAT+TGG 0.594144 5:-4646299 MsG0580024418.01.T01:intron
TTGTATGGGTGCCGTGACCA+TGG 0.597002 5:+4646531 None:intergenic
TACATTGGTAACTTCGAGAG+CGG 0.600222 5:-4646491 MsG0580024418.01.T01:CDS
TCAAACGGGGATGTCTACAT+TGG 0.601101 5:-4646506 MsG0580024418.01.T01:CDS
TAAGGATGCCGTGACCATCA+CGG 0.601999 5:+4646741 None:intergenic
ATGGGTGCCGTGACCATGGA+AGG 0.602986 5:+4646535 None:intergenic
GATGGAAGTAGGACAGGGAA+AGG 0.603067 5:-4646818 MsG0580024418.01.T01:CDS
TCCAACGGGGATATCTACAT+TGG 0.609663 5:-4646713 MsG0580024418.01.T01:CDS
GGCATCCTTACAAAATCCAA+CGG 0.609974 5:-4646728 MsG0580024418.01.T01:CDS
GATGGTAAAAGGAAAGGGAA+AGG 0.614671 5:-4646404 MsG0580024418.01.T01:CDS
TGATTGGGTTGATGGAAGCA+GGG 0.615378 5:-4646621 MsG0580024418.01.T01:CDS
AACGTATGCATGGCAAGGGA+AGG 0.615379 5:-4647090 MsG0580024418.01.T01:CDS
TAAGGGTGCCGTGACCATGA+CGG 0.617165 5:+4646948 None:intergenic
AGGGTGATCTCAGTTGCGAT+AGG 0.627899 5:-4645512 MsG0580024418.01.T01:intron
GGAAAACGTATGCATGGCAA+GGG 0.631325 5:-4647094 MsG0580024418.01.T01:CDS
GGGTTGATGGAAGTAGGACA+GGG 0.648539 5:-4646823 MsG0580024418.01.T01:CDS
TCAGATGGAACAATATATGA+GGG 0.653226 5:-4646437 MsG0580024418.01.T01:CDS
TATTCTAAAATCCACGCCAG+AGG 0.656524 5:+4647287 None:intergenic
CACCCATACAAATTCAAACG+GGG 0.664180 5:-4646519 MsG0580024418.01.T01:CDS
CATCCATACAAATTCAAATG+GGG 0.672466 5:-4646312 MsG0580024418.01.T01:CDS
GTGTACTTTCCCTTGCCATG+GGG 0.676637 5:+4646671 None:intergenic
ATGGCAAGGGAAAGTTCACA+TGG 0.680438 5:-4646460 MsG0580024418.01.T01:CDS
ATGGCAAGGGAAAGTACACA+TGG 0.692208 5:-4646667 MsG0580024418.01.T01:CDS
ATGGCAAGGGAAGGTACACA+TGG 0.694407 5:-4647081 MsG0580024418.01.T01:CDS
GTCAGATGGAGAAATATACG+AGG 0.704885 5:-4646852 MsG0580024418.01.T01:CDS
TCAAATGGAACAATATACCA+GGG 0.706440 5:-4647058 MsG0580024418.01.T01:CDS
ACGGCAAGGGAAAGTACACA+TGG 0.716405 5:-4646874 MsG0580024418.01.T01:CDS
CACCCTTACAAAATCCAATG+GGG 0.726402 5:-4646933 MsG0580024418.01.T01:CDS
TCAGATGGAGAAATATACGA+GGG 0.740857 5:-4646851 MsG0580024418.01.T01:CDS
CATCCTTACAAAATCCAACG+GGG 0.776072 5:-4646726 MsG0580024418.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTCAAATATAATTAAG+AGG + Chr5:4646903-4646922 None:intergenic 10.0%
!!! TTAATTATATTTGAATTTTG+TGG - Chr5:4646904-4646923 MsG0580024418.01.T01:CDS 10.0%
!!! TTATGATATTAATTTGATTT+GGG + Chr5:4646197-4646216 None:intergenic 10.0%
!!! TTTATGATATTAATTTGATT+TGG + Chr5:4646198-4646217 None:intergenic 10.0%
!! GAAACATATTAATAAACAAA+AGG + Chr5:4646772-4646791 None:intergenic 15.0%
!! TTTGTTAAAATGTAACAAAA+GGG + Chr5:4647158-4647177 None:intergenic 15.0%
!!! AATTATTACCTTTATTTCAA+TGG - Chr5:4646011-4646030 MsG0580024418.01.T01:intron 15.0%
!!! TTTTATCCTTTTTAGTATTA+TGG - Chr5:4645955-4645974 MsG0580024418.01.T01:intron 15.0%
!! AAGGATAAAAATAATTTACC+TGG + Chr5:4645945-4645964 None:intergenic 20.0%
!! AATATGACATAATAGAATTC+TGG + Chr5:4647067-4647086 None:intergenic 20.0%
!! AGGATAAAAATAATTTACCT+GGG + Chr5:4645944-4645963 None:intergenic 20.0%
!! CTTTGTTAAAATGTAACAAA+AGG + Chr5:4647159-4647178 None:intergenic 20.0%
!! GTATTGCTCAAAAAAAAAAA+AGG - Chr5:4646691-4646710 MsG0580024418.01.T01:CDS 20.0%
!! TTCAAATATAATTAAGAGGA+AGG + Chr5:4646899-4646918 None:intergenic 20.0%
!!! AGTTTTCCATAATACTAAAA+AGG + Chr5:4645964-4645983 None:intergenic 20.0%
!!! CTTTTGTTACATTTTAACAA+AGG - Chr5:4647157-4647176 MsG0580024418.01.T01:intron 20.0%
! AAATACAAGCACTATTTCAT+AGG + Chr5:4647023-4647042 None:intergenic 25.0%
! AACAATATATGAAGGTGATT+GGG - Chr5:4645528-4645547 MsG0580024418.01.T01:intron 25.0%
! AATAAATGGCTATAGAATAG+TGG + Chr5:4644963-4644982 None:intergenic 25.0%
! AATAACAAAATCGGTTATGA+CGG - Chr5:4647213-4647232 MsG0580024418.01.T01:intron 25.0%
! AATGGGTGTAATAACAAAAT+CGG - Chr5:4647204-4647223 MsG0580024418.01.T01:intron 25.0%
! CAAAGAAATCCAAACAAAAA+AGG + Chr5:4646931-4646950 None:intergenic 25.0%
! CATCACATGTATTATGTTTA+TGG - Chr5:4646568-4646587 MsG0580024418.01.T01:CDS 25.0%
! GAGATGACAATCATAATAAA+TGG + Chr5:4644977-4644996 None:intergenic 25.0%
! GTATAGAACCATTGAAATAA+AGG + Chr5:4646022-4646041 None:intergenic 25.0%
! TACAGTATCTTTATCAGTAT+CGG + Chr5:4646528-4646547 None:intergenic 25.0%
! TCAAATGGAACAATATATGA+AGG - Chr5:4645520-4645539 MsG0580024418.01.T01:intron 25.0%
! TGTTTGTAGAGATTGAAAAT+TGG - Chr5:4646949-4646968 MsG0580024418.01.T01:CDS 25.0%
! TTAAATGGAACAATACATGA+GGG - Chr5:4645906-4645925 MsG0580024418.01.T01:intron 25.0%
! TTTAAATGGAACAATACATG+AGG - Chr5:4645905-4645924 MsG0580024418.01.T01:intron 25.0%
!!! ACTTGTTTGGTTTTGTTTTT+AGG - Chr5:4647293-4647312 MsG0580024418.01.T01:CDS 25.0%
!!! CTAAATACTGACTGAAATTT+TGG - Chr5:4646267-4646286 MsG0580024418.01.T01:intron 25.0%
AAATGCTTCACTTTAAACCT+AGG + Chr5:4645016-4645035 None:intergenic 30.0%
AACAATATATGAGGGTGATT+GGG - Chr5:4645735-4645754 MsG0580024418.01.T01:intron 30.0%
AACATAATACATGTGATGCA+CGG + Chr5:4646566-4646585 None:intergenic 30.0%
AATGCTTCACTTTAAACCTA+GGG + Chr5:4645015-4645034 None:intergenic 30.0%
ACTGATCTAGCATATATTCA+TGG - Chr5:4645981-4646000 MsG0580024418.01.T01:intron 30.0%
ATAACAAAATCGGTTATGAC+GGG - Chr5:4647214-4647233 MsG0580024418.01.T01:intron 30.0%
ATTCTCTAGCTACTACTAAT+GGG - Chr5:4647187-4647206 MsG0580024418.01.T01:intron 30.0%
CATCCATACAAATTCAAATG+GGG - Chr5:4645852-4645871 MsG0580024418.01.T01:intron 30.0%
GAACAATATATGAAGGTGAT+TGG - Chr5:4645527-4645546 MsG0580024418.01.T01:intron 30.0%
GATTTCAGTTAACGATTACA+AGG - Chr5:4647253-4647272 MsG0580024418.01.T01:CDS 30.0%
GCATCCATACAAATTCAAAT+GGG - Chr5:4645851-4645870 MsG0580024418.01.T01:intron 30.0%
GGCTTGGAATCATTAAAAAA+TGG - Chr5:4646106-4646125 MsG0580024418.01.T01:intron 30.0%
GTTTATTGTCTGTTCAGTTA+TGG - Chr5:4646396-4646415 MsG0580024418.01.T01:CDS 30.0%
TACATTGGTAAATTCAAGAG+CGG - Chr5:4645880-4645899 MsG0580024418.01.T01:intron 30.0%
TATTCTCTAGCTACTACTAA+TGG - Chr5:4647186-4647205 MsG0580024418.01.T01:intron 30.0%
TCAAATGGAACAATATACCA+GGG - Chr5:4645106-4645125 MsG0580024418.01.T01:intron 30.0%
TCAGATGGAACAATATATGA+GGG - Chr5:4645727-4645746 MsG0580024418.01.T01:intron 30.0%
!! AAAGTGAAGCATTTTCCAAA+TGG - Chr5:4645022-4645041 MsG0580024418.01.T01:intron 30.0%
!! GTATTTTATCTGTAGTTCTG+TGG - Chr5:4647037-4647056 MsG0580024418.01.T01:CDS 30.0%
!! TACTGACTGAAATTTTGGTA+TGG - Chr5:4646272-4646291 MsG0580024418.01.T01:intron 30.0%
!! TTTTGTGGACCTTTTTTGTT+TGG - Chr5:4646919-4646938 MsG0580024418.01.T01:CDS 30.0%
ACTAATATCCACTGAGCTAT+AGG + Chr5:4646875-4646894 None:intergenic 35.0%
AGAAATATACGAGGGTGATT+GGG - Chr5:4645321-4645340 MsG0580024418.01.T01:intron 35.0%
AGTGTATTCATGAAGCTAGA+TGG - Chr5:4646085-4646104 MsG0580024418.01.T01:intron 35.0%
ATCCCCGTTTGAATTTGTAT+GGG + Chr5:4645650-4645669 None:intergenic 35.0%
ATGGAAAAAAGACAGGGAAA+GGG - Chr5:4645140-4645159 MsG0580024418.01.T01:intron 35.0%
ATTCAAGAGCGGTGTTTAAA+TGG - Chr5:4645891-4645910 MsG0580024418.01.T01:intron 35.0%
CTGCTAGGATATAGACTTAT+AGG - Chr5:4646817-4646836 MsG0580024418.01.T01:CDS 35.0%
CTTCCCCATTTGAATTTGTA+TGG + Chr5:4645858-4645877 None:intergenic 35.0%
GAACAATATATGAGGGTGAT+TGG - Chr5:4645734-4645753 MsG0580024418.01.T01:intron 35.0%
GGAAGAATCATATATCCATC+AGG - Chr5:4645781-4645800 MsG0580024418.01.T01:intron 35.0%
GGCATCCATACAAATTCAAA+TGG - Chr5:4645850-4645869 MsG0580024418.01.T01:intron 35.0%
GTCAAATGGAACAATATACC+AGG - Chr5:4645105-4645124 MsG0580024418.01.T01:intron 35.0%
GTCAGATGGAACAATATATG+AGG - Chr5:4645726-4645745 MsG0580024418.01.T01:intron 35.0%
TAGCAGATCTTCAGCTAAAA+TGG + Chr5:4646794-4646813 None:intergenic 35.0%
TCAGATGGAGAAATATACGA+GGG - Chr5:4645313-4645332 MsG0580024418.01.T01:intron 35.0%
TTCTCTATGAATTCCTTCCA+TGG - Chr5:4645616-4645635 MsG0580024418.01.T01:intron 35.0%
! ATCCCCATTGGATTTTGTAA+GGG + Chr5:4645236-4645255 None:intergenic 35.0%
! ATTACAAGGAGTACATCCTT+GGG - Chr5:4647267-4647286 MsG0580024418.01.T01:CDS 35.0%
! TACATTGGTAACTTCAAGAG+TGG - Chr5:4645466-4645485 MsG0580024418.01.T01:CDS 35.0%
! TCTAGCTTCATGAATACACT+TGG + Chr5:4646085-4646104 None:intergenic 35.0%
! TTCGAGAATGATCTTTTCCA+CGG - Chr5:4645271-4645290 MsG0580024418.01.T01:intron 35.0%
! TTGGTCAAATTTTCTGCACA+AGG + Chr5:4646066-4646085 None:intergenic 35.0%
!! GTTTAGTAGTCAGTTGGTTT+TGG - Chr5:4646736-4646755 MsG0580024418.01.T01:CDS 35.0%
!! TTTTAGCTGAAGATCTGCTA+TGG - Chr5:4646794-4646813 MsG0580024418.01.T01:CDS 35.0%
!!! CTTGTTTTACTTGTTCCTAG+TGG - Chr5:4644906-4644925 MsG0580024418.01.T01:intron 35.0%
AACAATATACCAGGGTGACT+GGG - Chr5:4645114-4645133 MsG0580024418.01.T01:intron 40.0%
AACCTAATATGTCTGTCGTG+AGG + Chr5:4646436-4646455 None:intergenic 40.0%
AATCAAGTAGCAAGTACGCA+TGG + Chr5:4646174-4646193 None:intergenic 40.0%
ATGAATTCCTTCCATGGTCA+CGG - Chr5:4645622-4645641 MsG0580024418.01.T01:intron 40.0%
ATTACCTTGCATTGTCCACT+AGG + Chr5:4644924-4644943 None:intergenic 40.0%
ATTCATGAAGCTAGATGGCT+TGG - Chr5:4646090-4646109 MsG0580024418.01.T01:intron 40.0%
CACCCATACAAATTCAAACG+GGG - Chr5:4645645-4645664 MsG0580024418.01.T01:intron 40.0%
CACCCTTACAAAATCCAATG+GGG - Chr5:4645231-4645250 MsG0580024418.01.T01:intron 40.0%
CATCCCCGTTTGAATTTGTA+TGG + Chr5:4645651-4645670 None:intergenic 40.0%
CATCCTTACAAAATCCAACG+GGG - Chr5:4645438-4645457 MsG0580024418.01.T01:intron 40.0%
CATCGTTTCTTGTAATCCCT+AGG - Chr5:4644996-4645015 MsG0580024418.01.T01:intron 40.0%
CATTAAAAAATGGCAGCGCA+TGG - Chr5:4646116-4646135 MsG0580024418.01.T01:intron 40.0%
CTAGGAGTTTAGTAGTCAGT+TGG - Chr5:4646730-4646749 MsG0580024418.01.T01:CDS 40.0%
GAGAAATATACGAGGGTGAT+TGG - Chr5:4645320-4645339 MsG0580024418.01.T01:intron 40.0%
GATGGAAAAAAGACAGGGAA+AGG - Chr5:4645139-4645158 MsG0580024418.01.T01:intron 40.0%
GATGGTAAAAGGAAAGGGAA+AGG - Chr5:4645760-4645779 MsG0580024418.01.T01:intron 40.0%
GCACCCATACAAATTCAAAC+GGG - Chr5:4645644-4645663 MsG0580024418.01.T01:intron 40.0%
GCACCCTTACAAAATCCAAT+GGG - Chr5:4645230-4645249 MsG0580024418.01.T01:intron 40.0%
GCATCCTTACAAAATCCAAC+GGG - Chr5:4645437-4645456 MsG0580024418.01.T01:intron 40.0%
GGCACCCATACAAATTCAAA+CGG - Chr5:4645643-4645662 MsG0580024418.01.T01:intron 40.0%
GGCATCCTTACAAAATCCAA+CGG - Chr5:4645436-4645455 MsG0580024418.01.T01:intron 40.0%
GTCAGATGGAGAAATATACG+AGG - Chr5:4645312-4645331 MsG0580024418.01.T01:intron 40.0%
GTCTATTTCCTATAGCTCAG+TGG - Chr5:4646864-4646883 MsG0580024418.01.T01:CDS 40.0%
TCAAATGGGGAAGTCTACAT+TGG - Chr5:4645865-4645884 MsG0580024418.01.T01:intron 40.0%
! AACAAGCACTCTTGTCGTTT+CGG - Chr5:4646493-4646512 MsG0580024418.01.T01:CDS 40.0%
! AATGATCTTTTCCACGGCAA+GGG - Chr5:4645277-4645296 MsG0580024418.01.T01:intron 40.0%
! AGAGATCATGATGACGTGAA+AGG - Chr5:4646632-4646651 MsG0580024418.01.T01:CDS 40.0%
! CATCCCCATTGGATTTTGTA+AGG + Chr5:4645237-4645256 None:intergenic 40.0%
! CCATCAGGAACAACTTTTGA+GGG - Chr5:4645382-4645401 MsG0580024418.01.T01:intron 40.0%
! GAGATCATGATGACGTGAAA+GGG - Chr5:4646633-4646652 MsG0580024418.01.T01:CDS 40.0%
! GATTACAAGGAGTACATCCT+TGG - Chr5:4647266-4647285 MsG0580024418.01.T01:CDS 40.0%
! GGAAAGTACACATGGTCAAA+TGG - Chr5:4645505-4645524 MsG0580024418.01.T01:intron 40.0%
! TACATTGGTAACTTCGAGAG+CGG - Chr5:4645673-4645692 MsG0580024418.01.T01:intron 40.0%
! TATCCCCGTTGGATTTTGTA+AGG + Chr5:4645444-4645463 None:intergenic 40.0%
! TCCATCAGGAACAACTTTTG+AGG - Chr5:4645381-4645400 MsG0580024418.01.T01:intron 40.0%
! TTCTCTGGGAATTCCTTTCA+TGG - Chr5:4645823-4645842 MsG0580024418.01.T01:intron 40.0%
! TTCTTTAGGAATTCCCGTCA+TGG - Chr5:4645202-4645221 MsG0580024418.01.T01:intron 40.0%
!! ACTTTTGAGGGTGAAATCTC+TGG - Chr5:4645394-4645413 MsG0580024418.01.T01:intron 40.0%
!! CTTTTGAGGGTGAAATCTCT+GGG - Chr5:4645395-4645414 MsG0580024418.01.T01:intron 40.0%
!! GGGTTGATGGAAAAAAGACA+GGG - Chr5:4645134-4645153 MsG0580024418.01.T01:intron 40.0%
!! GGGTTGATGGTAAAAGGAAA+GGG - Chr5:4645755-4645774 MsG0580024418.01.T01:intron 40.0%
!! GTGATTGGGTTGATGGTAAA+AGG - Chr5:4645749-4645768 MsG0580024418.01.T01:intron 40.0%
!! TATGAAGGTGATTGGGTTGA+TGG - Chr5:4645535-4645554 MsG0580024418.01.T01:intron 40.0%
!! TATTCTAAAATCCACGCCAG+AGG + Chr5:4644880-4644899 None:intergenic 40.0%
!! TGGGTTGATGGAAAAAAGAC+AGG - Chr5:4645133-4645152 MsG0580024418.01.T01:intron 40.0%
!! TGGGTTGATGGTAAAAGGAA+AGG - Chr5:4645754-4645773 MsG0580024418.01.T01:intron 40.0%
!!! GTCTACATTGGTTTTGCCAA+GGG - Chr5:4645049-4645068 MsG0580024418.01.T01:intron 40.0%
!!! GTTTTGAGGGTGGATTCTTT+AGG - Chr5:4645188-4645207 MsG0580024418.01.T01:intron 40.0%
!!! TGTCTACATTGGTTTTGCCA+AGG - Chr5:4645048-4645067 MsG0580024418.01.T01:intron 40.0%
AAACCAAACAAGTGAGCCCA+AGG + Chr5:4647286-4647305 None:intergenic 45.0%
ACCAATGTAGACATCCCCAT+TGG + Chr5:4645248-4645267 None:intergenic 45.0%
ACCAATGTAGATATCCCCGT+TGG + Chr5:4645455-4645474 None:intergenic 45.0%
ATGGCAAGGGAAAGTTCACA+TGG - Chr5:4645704-4645723 MsG0580024418.01.T01:intron 45.0%
ATGTGAACTTTCCCTTGCCA+TGG + Chr5:4645705-4645724 None:intergenic 45.0%
ATGTGTACTTTCCCTTGCCA+TGG + Chr5:4645498-4645517 None:intergenic 45.0%
CCAAATGGCGATGTCTACAT+TGG - Chr5:4645037-4645056 MsG0580024418.01.T01:intron 45.0%
CCAATGTAGACATCGCCATT+TGG + Chr5:4645040-4645059 None:intergenic 45.0%
CCCTCAAAAGTTGTTCCTGA+TGG + Chr5:4645385-4645404 None:intergenic 45.0%
GAAAAAAGACAGGGAAAGGG+CGG - Chr5:4645143-4645162 MsG0580024418.01.T01:intron 45.0%
GAACAATATACCAGGGTGAC+TGG - Chr5:4645113-4645132 MsG0580024418.01.T01:intron 45.0%
GAGGGTAAATTATCTGACCC+AGG - Chr5:4645924-4645943 MsG0580024418.01.T01:intron 45.0%
GGAAAACGTATGCATGGCAA+GGG - Chr5:4645070-4645089 MsG0580024418.01.T01:intron 45.0%
GGAAAGTTCACATGGTCAGA+TGG - Chr5:4645712-4645731 MsG0580024418.01.T01:intron 45.0%
GGACGGATCATATATCCATC+AGG - Chr5:4645574-4645593 MsG0580024418.01.T01:intron 45.0%
GGACGGATCATATTTCCATC+AGG - Chr5:4645367-4645386 MsG0580024418.01.T01:intron 45.0%
GGAGATGAAGATGTAGAGCT+AGG - Chr5:4646712-4646731 MsG0580024418.01.T01:CDS 45.0%
GGCACCCTTACAAAATCCAA+TGG - Chr5:4645229-4645248 MsG0580024418.01.T01:intron 45.0%
GGGAATTCCTTTCATGGTCA+CGG - Chr5:4645829-4645848 MsG0580024418.01.T01:intron 45.0%
GTCCTCACGACAGACATATT+AGG - Chr5:4646431-4646450 MsG0580024418.01.T01:CDS 45.0%
TCAAACGGGGATGTCTACAT+TGG - Chr5:4645658-4645677 MsG0580024418.01.T01:intron 45.0%
TCCAACGGGGATATCTACAT+TGG - Chr5:4645451-4645470 MsG0580024418.01.T01:CDS 45.0%
TCCAATGGGGATGTCTACAT+TGG - Chr5:4645244-4645263 MsG0580024418.01.T01:intron 45.0%
TGTGAACTTTCCCTTGCCAT+GGG + Chr5:4645704-4645723 None:intergenic 45.0%
TGTGTACTTTCCCTTGCCAT+GGG + Chr5:4645497-4645516 None:intergenic 45.0%
! ACAAGCACTCTTGTCGTTTC+GGG - Chr5:4646494-4646513 MsG0580024418.01.T01:CDS 45.0%
! ATGGCAAGGGAAAGTACACA+TGG - Chr5:4645497-4645516 MsG0580024418.01.T01:CDS 45.0%
! GAATGATCTTTTCCACGGCA+AGG - Chr5:4645276-4645295 MsG0580024418.01.T01:intron 45.0%
! GGAAAGTACACATGGTCAGA+TGG - Chr5:4645298-4645317 MsG0580024418.01.T01:intron 45.0%
! GGAAGGTACACATGGTCAAA+TGG - Chr5:4645091-4645110 MsG0580024418.01.T01:intron 45.0%
! TCCATCAGGAGCAAGTTTTG+AGG - Chr5:4645174-4645193 MsG0580024418.01.T01:intron 45.0%
! TGTTCCTAGTGGACAATGCA+AGG - Chr5:4644917-4644936 MsG0580024418.01.T01:intron 45.0%
! TTCAAGAGTGGTTTTCCCCA+TGG - Chr5:4645478-4645497 MsG0580024418.01.T01:CDS 45.0%
!! ACGACAAGAGTGCTTGTTGA+AGG + Chr5:4646491-4646510 None:intergenic 45.0%
!! CCATCAGGAGCAAGTTTTGA+GGG - Chr5:4645175-4645194 MsG0580024418.01.T01:intron 45.0%
!! GTGATTGGGTTGATGGAAGT+AGG - Chr5:4645335-4645354 MsG0580024418.01.T01:intron 45.0%
!! TATGAGGGTGATTGGGTTGA+TGG - Chr5:4645742-4645761 MsG0580024418.01.T01:intron 45.0%
!! TGATTGGGTTGATGGAAGCA+GGG - Chr5:4645543-4645562 MsG0580024418.01.T01:intron 45.0%
!!! AGTTTTGAGGGCGAATTCTC+TGG - Chr5:4645808-4645827 MsG0580024418.01.T01:intron 45.0%
!!! GTTTTGAGGGCGAATTCTCT+GGG - Chr5:4645809-4645828 MsG0580024418.01.T01:intron 45.0%
AACGTATGCATGGCAAGGGA+AGG - Chr5:4645074-4645093 MsG0580024418.01.T01:intron 50.0%
AGGAATTCCCGTCATGGTCA+CGG - Chr5:4645208-4645227 MsG0580024418.01.T01:intron 50.0%
AGGGTGATCTCAGTTGCGAT+AGG - Chr5:4646652-4646671 MsG0580024418.01.T01:CDS 50.0%
ATGGATGCCGTGACCATGAA+AGG + Chr5:4645839-4645858 None:intergenic 50.0%
ATGTGTACTTTCCCTTGCCG+TGG + Chr5:4645291-4645310 None:intergenic 50.0%
CATCCTTGGGCTCACTTGTT+TGG - Chr5:4647280-4647299 MsG0580024418.01.T01:CDS 50.0%
CGTCATCATGATCTCTGCGT+AGG + Chr5:4646628-4646647 None:intergenic 50.0%
GAAGATCTGCTATGGCTGCT+AGG - Chr5:4646802-4646821 MsG0580024418.01.T01:CDS 50.0%
GAAGTAGGACAGGGAAAGGA+CGG - Chr5:4645350-4645369 MsG0580024418.01.T01:intron 50.0%
GATGGAAGTAGGACAGGGAA+AGG - Chr5:4645346-4645365 MsG0580024418.01.T01:intron 50.0%
GCCAAGGGAAAACGTATGCA+TGG - Chr5:4645064-4645083 MsG0580024418.01.T01:intron 50.0%
GGGAAAACGTATGCATGGCA+AGG - Chr5:4645069-4645088 MsG0580024418.01.T01:intron 50.0%
GGGCGGATGATATATCCATC+AGG - Chr5:4645160-4645179 MsG0580024418.01.T01:intron 50.0%
GTGTACTTTCCCTTGCCATG+GGG + Chr5:4645496-4645515 None:intergenic 50.0%
TAAGGATGCCGTGACCATCA+CGG + Chr5:4645426-4645445 None:intergenic 50.0%
! AAGCACTCTTGTCGTTTCGG+GGG - Chr5:4646496-4646515 MsG0580024418.01.T01:CDS 50.0%
! ACGGCAAGGGAAAGTACACA+TGG - Chr5:4645290-4645309 MsG0580024418.01.T01:intron 50.0%
! AGCGGTTTTTCCCATGGCAA+GGG - Chr5:4645691-4645710 MsG0580024418.01.T01:intron 50.0%
! AGTGGTTTTCCCCATGGCAA+GGG - Chr5:4645484-4645503 MsG0580024418.01.T01:CDS 50.0%
! ATCTCTGGGAATTCCCGTGA+TGG - Chr5:4645409-4645428 MsG0580024418.01.T01:intron 50.0%
! ATGGCAAGGGAAGGTACACA+TGG - Chr5:4645083-4645102 MsG0580024418.01.T01:intron 50.0%
! CAAGCACTCTTGTCGTTTCG+GGG - Chr5:4646495-4646514 MsG0580024418.01.T01:CDS 50.0%
! CCCTCAAAACTTGCTCCTGA+TGG + Chr5:4645178-4645197 None:intergenic 50.0%
! GCCATGCATACGTTTTCCCT+TGG + Chr5:4645068-4645087 None:intergenic 50.0%
! TTCGAGAGCGGTTTTTCCCA+TGG - Chr5:4645685-4645704 MsG0580024418.01.T01:intron 50.0%
!! GGGTTGATGGAAGTAGGACA+GGG - Chr5:4645341-4645360 MsG0580024418.01.T01:intron 50.0%
!! GTGATTGGGTTGATGGAAGC+AGG - Chr5:4645542-4645561 MsG0580024418.01.T01:intron 50.0%
!! TACGAGGGTGATTGGGTTGA+TGG - Chr5:4645328-4645347 MsG0580024418.01.T01:intron 50.0%
!! TGGGTTGATGGAAGTAGGAC+AGG - Chr5:4645340-4645359 MsG0580024418.01.T01:intron 50.0%
!!! TCAGGAGCAAGTTTTGAGGG+TGG - Chr5:4645178-4645197 MsG0580024418.01.T01:intron 50.0%
AAGGATGCCGTGACCATCAC+GGG + Chr5:4645425-4645444 None:intergenic 55.0%
GGGAATTCCCGTGATGGTCA+CGG - Chr5:4645415-4645434 MsG0580024418.01.T01:intron 55.0%
TTCCATCAACCCAGTCACCC+TGG + Chr5:4645126-4645145 None:intergenic 55.0%
! GAGCGGTTTTTCCCATGGCA+AGG - Chr5:4645690-4645709 MsG0580024418.01.T01:intron 55.0%
! GAGTGGTTTTCCCCATGGCA+AGG - Chr5:4645483-4645502 MsG0580024418.01.T01:CDS 55.0%
! TACCAGGGTGACTGGGTTGA+TGG - Chr5:4645121-4645140 MsG0580024418.01.T01:intron 55.0%
! TTGTATGGGTGCCGTGACCA+TGG + Chr5:4645636-4645655 None:intergenic 55.0%
!! TAAGGGTGCCGTGACCATGA+CGG + Chr5:4645219-4645238 None:intergenic 55.0%
GAAGCAGGGCAGGGAATGGA+CGG - Chr5:4645557-4645576 MsG0580024418.01.T01:intron 60.0%
GATGGAAGCAGGGCAGGGAA+TGG - Chr5:4645553-4645572 MsG0580024418.01.T01:intron 60.0%
! ATGGGTGCCGTGACCATGGA+AGG + Chr5:4645632-4645651 None:intergenic 60.0%
!! AAGGGTGCCGTGACCATGAC+GGG + Chr5:4645218-4645237 None:intergenic 60.0%
!! GGGTTGATGGAAGCAGGGCA+GGG - Chr5:4645548-4645567 MsG0580024418.01.T01:intron 60.0%
!! TGGGTTGATGGAAGCAGGGC+AGG - Chr5:4645547-4645566 MsG0580024418.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 4644871 4647315 4644871 ID=MsG0580024418.01;Name=MsG0580024418.01
Chr5 mRNA 4644871 4647315 4644871 ID=MsG0580024418.01.T01;Parent=MsG0580024418.01;Name=MsG0580024418.01.T01;_AED=0.45;_eAED=0.67;_QI=0|0|0|1|1|1|5|0|337
Chr5 exon 4647248 4647315 4647248 ID=MsG0580024418.01.T01:exon:2323;Parent=MsG0580024418.01.T01
Chr5 exon 4646300 4647168 4646300 ID=MsG0580024418.01.T01:exon:2322;Parent=MsG0580024418.01.T01
Chr5 exon 4645446 4645521 4645446 ID=MsG0580024418.01.T01:exon:2321;Parent=MsG0580024418.01.T01
Chr5 exon 4644871 4644871 4644871 ID=MsG0580024418.01.T01:exon:2320;Parent=MsG0580024418.01.T01
Chr5 CDS 4647248 4647315 4647248 ID=MsG0580024418.01.T01:cds;Parent=MsG0580024418.01.T01
Chr5 CDS 4646300 4647168 4646300 ID=MsG0580024418.01.T01:cds;Parent=MsG0580024418.01.T01
Chr5 CDS 4645446 4645521 4645446 ID=MsG0580024418.01.T01:cds;Parent=MsG0580024418.01.T01
Chr5 CDS 4644871 4644871 4644871 ID=MsG0580024418.01.T01:cds;Parent=MsG0580024418.01.T01
Gene Sequence

>MsG0580024418.01.T01

ATGTTTCCTCTGGCGTGGATTTTAGAATATCTTTACTTGTTTTACTTGTTCCTAGTGGACAATGCAAGGTTTAAAGTGAAGCATTTTCCAAATGGCGATGTCTACATTGGTTTTGCCAAGGGAAAACGTATGCATGGCAAGGGAAGGTACACATGGTCAAATGGAACAATATACCAGGGTGACTGGGTTGATGGAAAAAAGACAGGGAAAGGGCGGATGATATATCCATCAGGAGCAAGTTTTGAGGGTGGATTCTTTAGGAATTCCCGTCATGGTCACGGCACCCTTACAAAATCCAATGGGGATGTCTACATTGGTAACTTCGAGAATGATCTTTTCCACGGCAAGGGAAAGTACACATGGTCAGATGGAGAAATATACGAGGGTGATTGGGTTGATGGAAGTAGGACAGGGAAAGGACGGATCATATTTCCATCAGGAACAACTTTTGAGGGTGAAATCTCTGGGAATTCCCGTGATGGTCACGGCATCCTTACAAAATCCAACGGGGATATCTACATTGGTAACTTCAAGAGTGGTTTTCCCCATGGCAAGGGAAAGTACACATGGTCAAATGGAACAATATATGAAGGTGATTGGGTTGATGGAAGCAGGGCAGGGAATGGACGGATCATATATCCATCAGGAACAACTTTTGAGGGTGAATTCTCTATGAATTCCTTCCATGGTCACGGCACCCATACAAATTCAAACGGGGATGTCTACATTGGTAACTTCGAGAGCGGTTTTTCCCATGGCAAGGGAAAGTTCACATGGTCAGATGGAACAATATATGAGGGTGATTGGGTTGATGGTAAAAGGAAAGGGAAAGGAAGAATCATATATCCATCAGGAGCAAGTTTTGAGGGCGAATTCTCTGGGAATTCCTTTCATGGTCACGGCATCCATACAAATTCAAATGGGGAAGTCTACATTGTTGCGATAGGAGATGAAGATGTAGATGTATTGCTCAAAAAAAAAAAAGGAGATGAAGATGTAGAGCTAGGAGTTTAG

Protein sequence

>MsG0580024418.01.T01

MFPLAWILEYLYLFYLFLVDNARFKVKHFPNGDVYIGFAKGKRMHGKGRYTWSNGTIYQGDWVDGKKTGKGRMIYPSGASFEGGFFRNSRHGHGTLTKSNGDVYIGNFENDLFHGKGKYTWSDGEIYEGDWVDGSRTGKGRIIFPSGTTFEGEISGNSRDGHGILTKSNGDIYIGNFKSGFPHGKGKYTWSNGTIYEGDWVDGSRAGNGRIIYPSGTTFEGEFSMNSFHGHGTHTNSNGDVYIGNFESGFSHGKGKFTWSDGTIYEGDWVDGKRKGKGRIIYPSGASFEGEFSGNSFHGHGIHTNSNGEVYIVAIGDEDVDVLLKKKKGDEDVELGV*