AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021784.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021784.01.T01 MTR_4g076240 83.829 538 39 4 30 525 349 880 0.0 879
MsG0480021784.01.T01 MTR_4g076240 88.462 78 8 1 1 77 243 320 3.11e-36 144
MsG0480021784.01.T01 MTR_7g090940 46.900 371 186 5 156 525 646 1006 1.22e-100 330
MsG0480021784.01.T01 MTR_2g078020 25.474 369 213 12 166 528 222 534 3.39e-16 82.4
MsG0480021784.01.T01 MTR_2g078020 25.474 369 213 12 166 528 222 534 4.32e-16 82.0
MsG0480021784.01.T01 MTR_5g063200 25.140 358 208 13 172 528 218 516 4.44e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021784.01.T01 AT5G12430 58.312 391 142 3 140 525 578 952 8.91e-152 464
MsG0480021784.01.T01 AT2G41520 40.319 501 266 10 43 526 322 806 5.62e-105 338
MsG0480021784.01.T01 AT2G41520 40.319 501 266 10 43 526 422 906 1.84e-104 338
MsG0480021784.01.T01 AT2G41520 36.727 501 253 11 43 526 422 875 1.03e-85 287
MsG0480021784.01.T01 AT5G10090 26.503 366 206 14 166 528 238 543 3.16e-15 79.0
MsG0480021784.01.T01 AT1G53300 22.844 429 268 13 100 525 166 534 5.72e-12 68.9

Find 99 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCGAGATGCTTGTTCTTT+AGG 0.229553 4:+64232803 None:intergenic
TAGTAATGATTACTTGTTTA+TGG 0.232058 4:+64230623 None:intergenic
AATGGAGGTTTCTCCTTATC+AGG 0.243327 4:-64233993 MsG0480021784.01.T01:CDS
TCTTGATGGGAATTATTTAA+AGG 0.244695 4:-64229021 MsG0480021784.01.T01:CDS
CAACCCAAAACAAGGGTTTC+TGG 0.248704 4:-64233373 MsG0480021784.01.T01:CDS
TGAATGAGGATCACAAATTA+AGG 0.248894 4:-64233348 MsG0480021784.01.T01:CDS
TTTAAGTTGTTATCTTGCTC+TGG 0.272032 4:-64232136 MsG0480021784.01.T01:intron
GGTGATAGAATGTTGAATTT+TGG 0.283457 4:-64233641 MsG0480021784.01.T01:CDS
CACACCAGAAACCCTTGTTT+TGG 0.288839 4:+64233369 None:intergenic
CAGGAGTGGAAGCAAGGTTT+TGG 0.317100 4:-64230485 MsG0480021784.01.T01:CDS
CGCCCTAACAAAAGAAAACT+TGG 0.321714 4:-64233536 MsG0480021784.01.T01:CDS
TGAAGAGGGTCTTTCTTTGC+TGG 0.322407 4:-64230670 MsG0480021784.01.T01:CDS
AAGCATCTCGGAGCTGTCTC+AGG 0.350309 4:-64232793 MsG0480021784.01.T01:CDS
GAAACCAAGCCTACAAGAAC+GGG 0.378362 4:-64232874 MsG0480021784.01.T01:CDS
TGCAGGGAATGAAGCATATC+AGG 0.379018 4:-64229204 MsG0480021784.01.T01:CDS
CAAGAACGGGGATTTGTCTA+TGG 0.383050 4:-64232861 MsG0480021784.01.T01:CDS
TTCAAAATGTGCTTGCAATC+AGG 0.383114 4:-64232087 MsG0480021784.01.T01:CDS
TAAAGGTTTCTCTCTTCAAC+TGG 0.409775 4:-64229004 MsG0480021784.01.T01:CDS
AGACAAATCCCCGTTCTTGT+AGG 0.409824 4:+64232865 None:intergenic
TGGTTGCCAAGTCACATATA+TGG 0.423062 4:-64230778 MsG0480021784.01.T01:CDS
GAGATGCAATAGAAGATTGT+AGG 0.430809 4:-64232712 MsG0480021784.01.T01:CDS
AAGTTGTCTACTTCAGACTA+TGG 0.436587 4:-64230737 MsG0480021784.01.T01:CDS
AATGAAAGTGTGAGTGGGTC+TGG 0.444327 4:-64233611 MsG0480021784.01.T01:CDS
ACTTGGCAACCAGCAGCAAT+TGG 0.445982 4:+64230789 None:intergenic
AATCCCCGTTCTTGTAGGCT+TGG 0.446039 4:+64232870 None:intergenic
CATGTGAAAAGTGGCGCCTC+CGG 0.451704 4:-64233297 MsG0480021784.01.T01:intron
TTAAGTTGTTATCTTGCTCT+GGG 0.465565 4:-64232135 MsG0480021784.01.T01:intron
CACCGGCACCTGTGCAAGGT+TGG 0.471355 4:-64234093 MsG0480021784.01.T01:CDS
AAGCTTTCCTAGGTGAAAGT+AGG 0.475153 4:+64230692 None:intergenic
AATGCTTGTCCAATTGCTGC+TGG 0.485361 4:-64230798 MsG0480021784.01.T01:CDS
TTCCAACCTTGCACAGGTGC+CGG 0.485423 4:+64234091 None:intergenic
GCCGCTGCATATAAAGTGTT+AGG 0.491729 4:-64229086 MsG0480021784.01.T01:CDS
AGCAGAAGAAGCAGCTGCAA+AGG 0.492619 4:+64233583 None:intergenic
CAATAACAGACAGCTGCAAA+TGG 0.494893 4:+64229116 None:intergenic
CTCTGATGCAGAGAGGGCAT+TGG 0.495323 4:-64231168 MsG0480021784.01.T01:CDS
TCCTTGCAGGAGTGGAAGCA+AGG 0.502626 4:-64230491 MsG0480021784.01.T01:intron
ACGCGAGCTCTTGCATCATA+AGG 0.504903 4:-64230434 MsG0480021784.01.T01:intron
GCTGGAACAACAAGAAGAAA+AGG 0.509166 4:-64230652 MsG0480021784.01.T01:CDS
GTCTGAGAGTTGTTCACCAA+TGG 0.510159 4:-64234011 MsG0480021784.01.T01:CDS
GACCCTCTTCAAGCTTTCCT+AGG 0.513761 4:+64230682 None:intergenic
TTTGCAAGAAGATCGTCCTC+AGG 0.515093 4:-64234038 MsG0480021784.01.T01:CDS
TGCAATCGCAGATTGCAGTC+TGG 0.517495 4:-64229051 MsG0480021784.01.T01:CDS
GCTGCCACACACATGTCTCT+TGG 0.517920 4:-64232743 MsG0480021784.01.T01:CDS
AGCCTCCGATGGCTTACAAA+AGG 0.521703 4:-64232028 MsG0480021784.01.T01:CDS
CAACATTCTATCACCATCAC+GGG 0.521812 4:+64233649 None:intergenic
GGAAACCAAGCCTACAAGAA+CGG 0.523034 4:-64232875 MsG0480021784.01.T01:CDS
CTTAAAGCCTACTTTCACCT+AGG 0.525307 4:-64230699 MsG0480021784.01.T01:CDS
CTGCCGAAGCATGTGAAAAG+TGG 0.526842 4:-64233306 MsG0480021784.01.T01:CDS
GCACCTGTGCAAGGTTGGAA+TGG 0.529775 4:-64234088 MsG0480021784.01.T01:CDS
CAATGCCCTCTCTGCATCAG+AGG 0.535640 4:+64231169 None:intergenic
AGTCTGGCTATAGCTCTTGA+TGG 0.536135 4:-64229035 MsG0480021784.01.T01:CDS
GGCTTCAGATTCAGCATCAT+CGG 0.537253 4:+64233670 None:intergenic
CGATGGCTTACAAAAGGCAC+AGG 0.538477 4:-64232022 MsG0480021784.01.T01:intron
GAGACATGTGTGTGGCAGCC+AGG 0.540507 4:+64232747 None:intergenic
AAGGGTTTCTGGTGTGAATG+AGG 0.546759 4:-64233362 MsG0480021784.01.T01:CDS
GAATGAGGATCACAAATTAA+GGG 0.556980 4:-64233347 MsG0480021784.01.T01:CDS
GGGAATGAAGCATATCAGGC+TGG 0.559205 4:-64229200 MsG0480021784.01.T01:CDS
AACATCCTCTGATGCAGAGA+GGG 0.562027 4:-64231174 MsG0480021784.01.T01:CDS
GTCTGGCTATAGCTCTTGAT+GGG 0.562618 4:-64229034 MsG0480021784.01.T01:CDS
AAATATCCATATATGTGACT+TGG 0.562685 4:+64230772 None:intergenic
AGTTATTACAAACAAGGACT+TGG 0.563253 4:-64232833 MsG0480021784.01.T01:CDS
TGAGAGTTGTTCACCAATGG+AGG 0.566033 4:-64234008 MsG0480021784.01.T01:CDS
ATATCAGCTGAGTAGATATG+AGG 0.567424 4:-64230865 MsG0480021784.01.T01:intron
TGCAATAGAAGATTGTAGGC+TGG 0.568554 4:-64232708 MsG0480021784.01.T01:CDS
CCACACACATGTCTCTTGGT+AGG 0.571548 4:-64232739 MsG0480021784.01.T01:CDS
GCTGCTATGTTATAGCAACC+TGG 0.576057 4:-64232765 MsG0480021784.01.T01:CDS
GGGTTGAGGAAAAGACACTC+TGG 0.577346 4:+64233390 None:intergenic
ACCTAACACTTTATATGCAG+CGG 0.579137 4:+64229085 None:intergenic
AGCTGAGAGTCGAACATCAA+GGG 0.579531 4:-64233963 MsG0480021784.01.T01:CDS
TACCTAAAGAACAAGCATCT+CGG 0.582598 4:-64232805 MsG0480021784.01.T01:CDS
GGCATTGGAACATATTAATG+AGG 0.584362 4:-64231153 MsG0480021784.01.T01:CDS
TGTCCATTCCAACCTTGCAC+AGG 0.584481 4:+64234085 None:intergenic
AGCATCTCGGAGCTGTCTCA+GGG 0.592481 4:-64232792 MsG0480021784.01.T01:CDS
TCTACACCGGCACCTGTGCA+AGG 0.597868 4:-64234097 MsG0480021784.01.T01:CDS
TGATAAGGAGAAACCTCCAT+TGG 0.600155 4:+64233995 None:intergenic
ATTTCAGTGGAAGCCTCCGA+TGG 0.601375 4:-64232039 MsG0480021784.01.T01:CDS
CACCTAGGAAAGCTTGAAGA+GGG 0.602244 4:-64230684 MsG0480021784.01.T01:CDS
TTGCAAGAAGATCGTCCTCA+GGG 0.603300 4:-64234037 MsG0480021784.01.T01:CDS
TAGCTGAGAGTCGAACATCA+AGG 0.607839 4:-64233964 MsG0480021784.01.T01:CDS
TGTAGATCGTAAGATTTCAG+TGG 0.610390 4:-64232052 MsG0480021784.01.T01:CDS
ATGCAAGAGCTCGCGTACAG+TGG 0.611348 4:+64230441 None:intergenic
TCAACATTCTATCACCATCA+CGG 0.617184 4:+64233648 None:intergenic
TCACCTAGGAAAGCTTGAAG+AGG 0.618307 4:-64230685 MsG0480021784.01.T01:CDS
CGAGAAATGAAAGTGTGAGT+GGG 0.638333 4:-64233616 MsG0480021784.01.T01:CDS
GCCCTAACAAAAGAAAACTT+GGG 0.642220 4:-64233535 MsG0480021784.01.T01:intron
TCGCGTACAGTGGCAGCTAG+TGG 0.650839 4:+64230451 None:intergenic
TAAGTCTGCTAGTGATAGCG+TGG 0.653444 4:-64233699 MsG0480021784.01.T01:intron
GAATTTGAAGCATTCTACAC+CGG 0.659013 4:-64234110 MsG0480021784.01.T01:CDS
GTGCAAGGTTGGAATGGACA+TGG 0.668152 4:-64234082 MsG0480021784.01.T01:CDS
TCAGCTGAGTAGATATGAGG+AGG 0.669038 4:-64230862 MsG0480021784.01.T01:intron
ACGAGAAATGAAAGTGTGAG+TGG 0.670433 4:-64233617 MsG0480021784.01.T01:CDS
TTGTCTACTTCAGACTATGG+AGG 0.675887 4:-64230734 MsG0480021784.01.T01:CDS
TGAGGATCACAAATTAAGGG+AGG 0.676897 4:-64233344 MsG0480021784.01.T01:CDS
GCTGAGAGTTATTACAAACA+AGG 0.682479 4:-64232839 MsG0480021784.01.T01:CDS
GAACATCCTCTGATGCAGAG+AGG 0.691498 4:-64231175 MsG0480021784.01.T01:CDS
GCTGAATCTGAAGCCCGTGA+TGG 0.694383 4:-64233662 MsG0480021784.01.T01:CDS
CAACTCTCAGACGAACCCTG+AGG 0.755317 4:+64234022 None:intergenic
AAACCAAGCCTACAAGAACG+GGG 0.755398 4:-64232873 MsG0480021784.01.T01:CDS
CCTACCAAGAGACATGTGTG+TGG 0.764869 4:+64232739 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAATAATTTATACTAAAAA+TGG + Chr4:64231465-64231484 None:intergenic 10.0%
!! GTTTATAAATTATTGGAAAT+TGG - Chr4:64231589-64231608 MsG0480021784.01.T01:intron 15.0%
!! TTTGTAAAATTAAATAAAGC+CGG - Chr4:64233049-64233068 MsG0480021784.01.T01:intron 15.0%
!!! AAATATAGTTTCTTTGATTT+TGG - Chr4:64230136-64230155 MsG0480021784.01.T01:intron 15.0%
!!! GGATTTTTTTTTTTTTTTTG+AGG - Chr4:64233245-64233264 MsG0480021784.01.T01:intron 15.0%
!!! GTTTATTAGACTTTAAAAAT+GGG - Chr4:64232902-64232921 MsG0480021784.01.T01:intron 15.0%
!!! TTAATTTTACAAATTCAAAC+AGG + Chr4:64233042-64233061 None:intergenic 15.0%
!! AAACAACTACATAAAAAAGA+AGG + Chr4:64234128-64234147 None:intergenic 20.0%
!! AAATGAATAGATTAATGAGT+TGG - Chr4:64229949-64229968 MsG0480021784.01.T01:intron 20.0%
!! AATTGAAACTTGATATATCA+TGG - Chr4:64231125-64231144 MsG0480021784.01.T01:CDS 20.0%
!! ATAATTTATAAACCTAAAGC+AGG + Chr4:64231582-64231601 None:intergenic 20.0%
!! ATCAAATAAAGGGAAATAAT+GGG + Chr4:64230653-64230672 None:intergenic 20.0%
!! ATGGATAAAACATCAAATAA+AGG + Chr4:64230664-64230683 None:intergenic 20.0%
!! CATATCTTTGAATAATAGTT+AGG + Chr4:64230805-64230824 None:intergenic 20.0%
!! CTAACTATTATTCAAAGATA+TGG - Chr4:64230803-64230822 MsG0480021784.01.T01:CDS 20.0%
!! GTATTATATTAACCTTCAAT+AGG - Chr4:64231258-64231277 MsG0480021784.01.T01:intron 20.0%
!! TAATTTATAAACCTAAAGCA+GGG + Chr4:64231581-64231600 None:intergenic 20.0%
!! TAGTAATGATTACTTGTTTA+TGG + Chr4:64232481-64232500 None:intergenic 20.0%
!! TGAATTCACAAATTATAAAC+TGG - Chr4:64231798-64231817 MsG0480021784.01.T01:intron 20.0%
!! TGATATTATATCTGAAAACA+TGG - Chr4:64231555-64231574 MsG0480021784.01.T01:intron 20.0%
!! TGGATAAAACATCAAATAAA+GGG + Chr4:64230663-64230682 None:intergenic 20.0%
!! TTGTAAAATTAAATAAAGCC+GGG - Chr4:64233050-64233069 MsG0480021784.01.T01:intron 20.0%
!!! AATAGATCAAAATTTTCTCA+AGG - Chr4:64230423-64230442 MsG0480021784.01.T01:intron 20.0%
!!! ACTTGAAAATTGCTTTTTAT+TGG - Chr4:64233845-64233864 MsG0480021784.01.T01:intron 20.0%
!!! ATCTGTTTTATCTTGTAATT+TGG - Chr4:64233954-64233973 MsG0480021784.01.T01:CDS 20.0%
!!! ATTTTCAAGTTACATAAAAC+AGG + Chr4:64233835-64233854 None:intergenic 20.0%
!!! CATAAGAAAGGTTTTAAAAA+TGG - Chr4:64231289-64231308 MsG0480021784.01.T01:intron 20.0%
!!! CATTTTTAAAACCTTTCTTA+TGG + Chr4:64231291-64231310 None:intergenic 20.0%
!!! CTTGAAAATTGCTTTTTATT+GGG - Chr4:64233846-64233865 MsG0480021784.01.T01:intron 20.0%
!!! GATTATTTTTAGGTGTATTT+GGG - Chr4:64233334-64233353 MsG0480021784.01.T01:CDS 20.0%
!!! GCTTTAGGTTTATAAATTAT+TGG - Chr4:64231582-64231601 MsG0480021784.01.T01:intron 20.0%
!!! GGTTTATTAGACTTTAAAAA+TGG - Chr4:64232901-64232920 MsG0480021784.01.T01:intron 20.0%
!!! GTTTCATGATATTTTAATGA+TGG - Chr4:64232704-64232723 MsG0480021784.01.T01:CDS 20.0%
!!! TATAATAAAAGTATACTCAC+CGG + Chr4:64229826-64229845 None:intergenic 20.0%
!!! TGATTATTTTTAGGTGTATT+TGG - Chr4:64233333-64233352 MsG0480021784.01.T01:CDS 20.0%
!!! TTGAAATATTTTGTCAAAGT+GGG - Chr4:64231634-64231653 MsG0480021784.01.T01:intron 20.0%
!!! TTTTCAAGTTACATAAAACA+GGG + Chr4:64233834-64233853 None:intergenic 20.0%
! AAATATCCATATATGTGACT+TGG + Chr4:64232332-64232351 None:intergenic 25.0%
! ACACCTAAAAATAATCAAGT+TGG + Chr4:64233330-64233349 None:intergenic 25.0%
! ACAGAAAACAAAAAGATTAG+AGG + Chr4:64230485-64230504 None:intergenic 25.0%
! ACATTGATGAAGATTTGATT+GGG - Chr4:64229233-64229252 MsG0480021784.01.T01:intron 25.0%
! AGTACTCATAAAATACAAAC+TGG + Chr4:64233586-64233605 None:intergenic 25.0%
! AGTGAAAATACTAATCAGTT+AGG + Chr4:64231851-64231870 None:intergenic 25.0%
! ATGTGATCAACAAAATTCAT+CGG + Chr4:64229217-64229236 None:intergenic 25.0%
! ATTAAAATGACAAAAGCCTT+AGG - Chr4:64230539-64230558 MsG0480021784.01.T01:intron 25.0%
! CATCAAATAAAGGGAAATAA+TGG + Chr4:64230654-64230673 None:intergenic 25.0%
! GATAGAAAATAGTTACTCTA+GGG - Chr4:64230737-64230756 MsG0480021784.01.T01:CDS 25.0%
! GATTGAAAACAAAATGACTT+AGG + Chr4:64230942-64230961 None:intergenic 25.0%
! GCAGAAAATTAAGCAATTAA+TGG + Chr4:64230683-64230702 None:intergenic 25.0%
! GCATAAATTACTACACTAAA+AGG + Chr4:64232183-64232202 None:intergenic 25.0%
! GTTACCTATCTATATTAGTA+CGG + Chr4:64231661-64231680 None:intergenic 25.0%
! TCAAATAAAGGGAAATAATG+GGG + Chr4:64230652-64230671 None:intergenic 25.0%
! TCTTGATGGGAATTATTTAA+AGG - Chr4:64234080-64234099 MsG0480021784.01.T01:CDS 25.0%
! TGATAGAAAATAGTTACTCT+AGG - Chr4:64230736-64230755 MsG0480021784.01.T01:CDS 25.0%
! TGTAAAATTAAATAAAGCCG+GGG - Chr4:64233051-64233070 MsG0480021784.01.T01:intron 25.0%
!! CTAAAATGAGCAACTTTTTA+GGG + Chr4:64233404-64233423 None:intergenic 25.0%
!! GTTGAAATATTTTGTCAAAG+TGG - Chr4:64231633-64231652 MsG0480021784.01.T01:intron 25.0%
!! TAAAATGAGCAACTTTTTAG+GGG + Chr4:64233403-64233422 None:intergenic 25.0%
!! TAACTGATTAGTATTTTCAC+TGG - Chr4:64231850-64231869 MsG0480021784.01.T01:intron 25.0%
!! TAATGAGTTGGATAGAAATA+TGG - Chr4:64229961-64229980 MsG0480021784.01.T01:intron 25.0%
!! TGAAATATTTTGTCAAAGTG+GGG - Chr4:64231635-64231654 MsG0480021784.01.T01:intron 25.0%
!! TTTTATGCTTAATAATGCCT+AGG - Chr4:64232799-64232818 MsG0480021784.01.T01:CDS 25.0%
!!! AAGGTTTTAAAAATGGTTCA+TGG - Chr4:64231296-64231315 MsG0480021784.01.T01:intron 25.0%
!!! GAACCAACTTGATTATTTTT+AGG - Chr4:64233324-64233343 MsG0480021784.01.T01:CDS 25.0%
!!! TAGACTTTAAAAATGGGTTT+TGG - Chr4:64232908-64232927 MsG0480021784.01.T01:intron 25.0%
!!! TAGCAATATTATTTCTGGAA+TGG + Chr4:64230618-64230637 None:intergenic 25.0%
!!! TGTATCAGATTTTGATATTC+TGG - Chr4:64229886-64229905 MsG0480021784.01.T01:intron 25.0%
!!! TTTATGTGCGTATCTTTTTT+TGG + Chr4:64233552-64233571 None:intergenic 25.0%
!!! TTTTAAGCATCGAGATTAAT+GGG - Chr4:64230902-64230921 MsG0480021784.01.T01:intron 25.0%
AAGAAAACTTGGGTAAATGT+TGG - Chr4:64229576-64229595 MsG0480021784.01.T01:intron 30.0%
AATACTAATCAGTTAGGAAG+AGG + Chr4:64231845-64231864 None:intergenic 30.0%
AGAAGTAATTGTAAAAAGCC+AGG + Chr4:64229921-64229940 None:intergenic 30.0%
AGGTATAGTTGAAGTTAACT+AGG - Chr4:64230765-64230784 MsG0480021784.01.T01:CDS 30.0%
AGGTGAAAATATTTGTGTTG+AGG - Chr4:64229334-64229353 MsG0480021784.01.T01:intron 30.0%
AGTTATTACAAACAAGGACT+TGG - Chr4:64230268-64230287 MsG0480021784.01.T01:intron 30.0%
ATACTAATCAGTTAGGAAGA+GGG + Chr4:64231844-64231863 None:intergenic 30.0%
CAAAAATTCGTGGTTGAATA+CGG + Chr4:64231379-64231398 None:intergenic 30.0%
CACATTGATGAAGATTTGAT+TGG - Chr4:64229232-64229251 MsG0480021784.01.T01:intron 30.0%
CTGTACATTTCTGTTGTTAA+AGG - Chr4:64232828-64232847 MsG0480021784.01.T01:CDS 30.0%
CTTAGAATACAACTTCAATG+AGG + Chr4:64233785-64233804 None:intergenic 30.0%
GAATAAGGAACCTTTATGTT+TGG + Chr4:64229624-64229643 None:intergenic 30.0%
GAATGAGGATCACAAATTAA+GGG - Chr4:64229754-64229773 MsG0480021784.01.T01:intron 30.0%
GACTGTAGCAATATTATTTC+TGG + Chr4:64230623-64230642 None:intergenic 30.0%
GGTATAGTTGAAGTTAACTA+GGG - Chr4:64230766-64230785 MsG0480021784.01.T01:CDS 30.0%
TAATTAAGTCACTGCAGATA+TGG + Chr4:64229864-64229883 None:intergenic 30.0%
TCTGATATTGCAAAAATTCG+TGG + Chr4:64231389-64231408 None:intergenic 30.0%
TGAAACTTGATATATCATGG+AGG - Chr4:64231128-64231147 MsG0480021784.01.T01:CDS 30.0%
TGAATGAGGATCACAAATTA+AGG - Chr4:64229753-64229772 MsG0480021784.01.T01:intron 30.0%
TTAATCCAATGTTGGACTTT+GGG - Chr4:64231492-64231511 MsG0480021784.01.T01:intron 30.0%
TTCTATCAAAGAAGACTCTA+AGG + Chr4:64230724-64230743 None:intergenic 30.0%
TTTAATCCAATGTTGGACTT+TGG - Chr4:64231491-64231510 MsG0480021784.01.T01:intron 30.0%
! AAACCTCTAGATTTTGTGAA+CGG + Chr4:64231777-64231796 None:intergenic 30.0%
! AAATTCAAACAGGAGAGTAT+AGG + Chr4:64233032-64233051 None:intergenic 30.0%
! AATTGCTTAATTTTCTGCTC+TGG - Chr4:64230685-64230704 MsG0480021784.01.T01:CDS 30.0%
! ACCCAAGTTTTCTTTTGTTA+GGG + Chr4:64229570-64229589 None:intergenic 30.0%
! ACGAATTTTTGCAATATCAG+AGG - Chr4:64231388-64231407 MsG0480021784.01.T01:intron 30.0%
! CTAAATATGCTCTAAATCAG+AGG - Chr4:64230205-64230224 MsG0480021784.01.T01:intron 30.0%
! GCTAAAATGAGCAACTTTTT+AGG + Chr4:64233405-64233424 None:intergenic 30.0%
! GGTGATAGAATGTTGAATTT+TGG - Chr4:64229460-64229479 MsG0480021784.01.T01:intron 30.0%
! TACCCAAGTTTTCTTTTGTT+AGG + Chr4:64229571-64229590 None:intergenic 30.0%
! TTAAGTTGTTATCTTGCTCT+GGG - Chr4:64230966-64230985 MsG0480021784.01.T01:intron 30.0%
! TTCTTACACTGAACTAGTTT+GGG - Chr4:64231232-64231251 MsG0480021784.01.T01:intron 30.0%
!! AAAATGAGCAACTTTTTAGG+GGG + Chr4:64233402-64233421 None:intergenic 30.0%
!! TTTAAGTTGTTATCTTGCTC+TGG - Chr4:64230965-64230984 MsG0480021784.01.T01:intron 30.0%
!!! AGCAGAAATGTTCTAGTTTT+AGG + Chr4:64232762-64232781 None:intergenic 30.0%
!!! GGACATGGTTTTGTTTTTAA+AGG - Chr4:64229034-64229053 MsG0480021784.01.T01:CDS 30.0%
!!! GTTTTAAGCATCGAGATTAA+TGG - Chr4:64230901-64230920 MsG0480021784.01.T01:intron 30.0%
!!! TTTTATGAGTACTGATGATG+AGG - Chr4:64233593-64233612 MsG0480021784.01.T01:CDS 30.0%
!!! TTTTTTTGAGGTCTCGAAAT+GGG - Chr4:64233257-64233276 MsG0480021784.01.T01:intron 30.0%
!!! TTTTTTTTGAGGTCTCGAAA+TGG - Chr4:64233256-64233275 MsG0480021784.01.T01:intron 30.0%
AAAAACAGTCTACTGCTTGA+TGG - Chr4:64231719-64231738 MsG0480021784.01.T01:intron 35.0%
AAAAAGATTAGAGGCAACGA+TGG + Chr4:64230476-64230495 None:intergenic 35.0%
AAATCCCACTTTGAGTAGTA+TGG + Chr4:64233231-64233250 None:intergenic 35.0%
AAGTTGTCTACTTCAGACTA+TGG - Chr4:64232364-64232383 MsG0480021784.01.T01:intron 35.0%
AATCCCACTTTGAGTAGTAT+GGG + Chr4:64233230-64233249 None:intergenic 35.0%
AATGTAAATGTGGGCTCAAA+TGG - Chr4:64230585-64230604 MsG0480021784.01.T01:intron 35.0%
ACCTAACACTTTATATGCAG+CGG + Chr4:64234019-64234038 None:intergenic 35.0%
ACTTTGAATCCTTGTGATCA+AGG + Chr4:64231435-64231454 None:intergenic 35.0%
ATATCAGCTGAGTAGATATG+AGG - Chr4:64232236-64232255 MsG0480021784.01.T01:intron 35.0%
ATATTCTGGATTACAAGTCC+TGG - Chr4:64229900-64229919 MsG0480021784.01.T01:intron 35.0%
ATGATTACACCTTGATCACA+AGG - Chr4:64231423-64231442 MsG0480021784.01.T01:intron 35.0%
ATGTAAATGTGGGCTCAAAT+GGG - Chr4:64230586-64230605 MsG0480021784.01.T01:intron 35.0%
ATTCCGTTCACAAAATCTAG+AGG - Chr4:64231771-64231790 MsG0480021784.01.T01:intron 35.0%
CACAAATTATAAACTGGCTG+TGG - Chr4:64231804-64231823 MsG0480021784.01.T01:intron 35.0%
CGTAGTCTTTAATCCAATGT+TGG - Chr4:64231484-64231503 MsG0480021784.01.T01:intron 35.0%
CGTTAAAAGCTAGCTATCAA+GGG - Chr4:64233170-64233189 MsG0480021784.01.T01:intron 35.0%
CTTCTTACACTGAACTAGTT+TGG - Chr4:64231231-64231250 MsG0480021784.01.T01:intron 35.0%
GAAAGCCTAATATTGTGTCA+GGG - Chr4:64229676-64229695 MsG0480021784.01.T01:intron 35.0%
GAGATGCAATAGAAGATTGT+AGG - Chr4:64230389-64230408 MsG0480021784.01.T01:intron 35.0%
GCAAAAATGCATGTGAGAAA+GGG + Chr4:64232869-64232888 None:intergenic 35.0%
GCCCTAACAAAAGAAAACTT+GGG - Chr4:64229566-64229585 MsG0480021784.01.T01:intron 35.0%
GCTGAGAGTTATTACAAACA+AGG - Chr4:64230262-64230281 MsG0480021784.01.T01:intron 35.0%
GTTAAAAGCTAGCTATCAAG+GGG - Chr4:64233171-64233190 MsG0480021784.01.T01:intron 35.0%
TAAAGGTTTCTCTCTTCAAC+TGG - Chr4:64234097-64234116 MsG0480021784.01.T01:CDS 35.0%
TACCTAAAGAACAAGCATCT+CGG - Chr4:64230296-64230315 MsG0480021784.01.T01:intron 35.0%
TACTAATCAGTTAGGAAGAG+GGG + Chr4:64231843-64231862 None:intergenic 35.0%
TAGAAAAGAGTAGAGAAGCA+AGG + Chr4:64233716-64233735 None:intergenic 35.0%
TAGGAAAACTGCCATAAGAA+AGG - Chr4:64231277-64231296 MsG0480021784.01.T01:intron 35.0%
TCAACATTCTATCACCATCA+CGG + Chr4:64229456-64229475 None:intergenic 35.0%
TGAAGTTAACTAGGGTTGTT+GGG - Chr4:64230774-64230793 MsG0480021784.01.T01:CDS 35.0%
TGCAAAAATGCATGTGAGAA+AGG + Chr4:64232870-64232889 None:intergenic 35.0%
TGGTTATTGCCTATTGGAAT+GGG + Chr4:64233638-64233657 None:intergenic 35.0%
TGTAGATCGTAAGATTTCAG+TGG - Chr4:64231049-64231068 MsG0480021784.01.T01:intron 35.0%
TTAAAAGCTAGCTATCAAGG+GGG - Chr4:64233172-64233191 MsG0480021784.01.T01:intron 35.0%
TTCAAAATGTGCTTGCAATC+AGG - Chr4:64231014-64231033 MsG0480021784.01.T01:intron 35.0%
TTGAAGTTAACTAGGGTTGT+TGG - Chr4:64230773-64230792 MsG0480021784.01.T01:CDS 35.0%
TTGGTTATTGCCTATTGGAA+TGG + Chr4:64233639-64233658 None:intergenic 35.0%
TTTCCAGTAAGAGTTGCAAA+TGG + Chr4:64229660-64229679 None:intergenic 35.0%
! AAAGGGAAATAATGGGGATT+GGG + Chr4:64230646-64230665 None:intergenic 35.0%
! AATAAAAGTATACTCACCGG+AGG + Chr4:64229823-64229842 None:intergenic 35.0%
! CAAGTCTTATCCCATTAAGT+GGG + Chr4:64230030-64230049 None:intergenic 35.0%
! CATTTTTGCAGCAGATATTG+TGG - Chr4:64232880-64232899 MsG0480021784.01.T01:intron 35.0%
! GAAAGCAGAAGCTCTTTTAA+TGG - Chr4:64232011-64232030 MsG0480021784.01.T01:intron 35.0%
! GAATTTGAAGCATTCTACAC+CGG - Chr4:64228991-64229010 MsG0480021784.01.T01:CDS 35.0%
! GAGGATGGTATAATTTGTAC+AGG - Chr4:64233612-64233631 MsG0480021784.01.T01:CDS 35.0%
! GAGGCATATGAGTATTTTTC+TGG + Chr4:64233766-64233785 None:intergenic 35.0%
! GGCATTGGAACATATTAATG+AGG - Chr4:64231948-64231967 MsG0480021784.01.T01:intron 35.0%
! TAAAGGGAAATAATGGGGAT+TGG + Chr4:64230647-64230666 None:intergenic 35.0%
! TATGGCAGTTTTCCTATTGA+AGG + Chr4:64231273-64231292 None:intergenic 35.0%
! TGGCATATGATAGAGCATTA+TGG - Chr4:64229981-64230000 MsG0480021784.01.T01:intron 35.0%
! TGTTCTCTAAGTGTGTTGAT+AGG + Chr4:64233147-64233166 None:intergenic 35.0%
! TTGGTTCTTATGAATCTGGT+GGG + Chr4:64233311-64233330 None:intergenic 35.0%
! TTTTCCTCAACCCAAAACAA+GGG - Chr4:64229721-64229740 MsG0480021784.01.T01:intron 35.0%
!! ATAGTTACTCTAGGGTTGTT+AGG - Chr4:64230745-64230764 MsG0480021784.01.T01:CDS 35.0%
!! ATTTTTCTGGTGCCTTTTGA+TGG + Chr4:64233753-64233772 None:intergenic 35.0%
!! CAAGTTGGTTCTTATGAATC+TGG + Chr4:64233315-64233334 None:intergenic 35.0%
!! GTGTATTGGTTATTGCCTAT+TGG + Chr4:64233644-64233663 None:intergenic 35.0%
!! TGTGTTGATAGGTATTGACT+TGG + Chr4:64233136-64233155 None:intergenic 35.0%
!! TTATGCCAATTGATTCGTGT+TGG - Chr4:64232197-64232216 MsG0480021784.01.T01:intron 35.0%
!! TTCTTTTGTTAGGGCGTTTT+GGG + Chr4:64229561-64229580 None:intergenic 35.0%
!! TTTCTTTTGTTAGGGCGTTT+TGG + Chr4:64229562-64229581 None:intergenic 35.0%
!!! CCTTGATAGCTAGCTTTTAA+CGG + Chr4:64233172-64233191 None:intergenic 35.0%
!!! GTGCGTATCTTTTTTTGGTT+GGG + Chr4:64233547-64233566 None:intergenic 35.0%
!!! TCAGCTAGTTTTTCCTGATA+AGG + Chr4:64229124-64229143 None:intergenic 35.0%
!!! TGTGCGTATCTTTTTTTGGT+TGG + Chr4:64233548-64233567 None:intergenic 35.0%
!!! TTTTTTGAGGTCTCGAAATG+GGG - Chr4:64233258-64233277 MsG0480021784.01.T01:intron 35.0%
AAAAGAGTAGAGAAGCAAGG+TGG + Chr4:64233713-64233732 None:intergenic 40.0%
AAATACAAACTGGTAGCCCA+AGG + Chr4:64233576-64233595 None:intergenic 40.0%
AAATCTCGGGCAAACTGATA+AGG - Chr4:64232531-64232550 MsG0480021784.01.T01:intron 40.0%
AAGATACGCACATAAACCCT+TGG - Chr4:64233556-64233575 MsG0480021784.01.T01:CDS 40.0%
AAGCTTTCCTAGGTGAAAGT+AGG + Chr4:64232412-64232431 None:intergenic 40.0%
AATACAAACTGGTAGCCCAA+GGG + Chr4:64233575-64233594 None:intergenic 40.0%
AATGGAGGTTTCTCCTTATC+AGG - Chr4:64229108-64229127 MsG0480021784.01.T01:CDS 40.0%
ACAACTTCTCTGCCATCAAA+AGG - Chr4:64233738-64233757 MsG0480021784.01.T01:intron 40.0%
ACTAATCAGTTAGGAAGAGG+GGG + Chr4:64231842-64231861 None:intergenic 40.0%
AGATACGCACATAAACCCTT+GGG - Chr4:64233557-64233576 MsG0480021784.01.T01:CDS 40.0%
AGATAGAAAGGAGGCGAAAT+CGG - Chr4:64229301-64229320 MsG0480021784.01.T01:intron 40.0%
AGGACCTCGAATGTAAATGT+GGG - Chr4:64230576-64230595 MsG0480021784.01.T01:intron 40.0%
CAACATTCTATCACCATCAC+GGG + Chr4:64229455-64229474 None:intergenic 40.0%
CAATAACAGACAGCTGCAAA+TGG + Chr4:64233988-64234007 None:intergenic 40.0%
CATCCCATACTACTCAAAGT+GGG - Chr4:64233224-64233243 MsG0480021784.01.T01:intron 40.0%
CATGGAACAGGATTCTGATA+GGG - Chr4:64233090-64233109 MsG0480021784.01.T01:intron 40.0%
CCACTTAATGGGATAAGACT+TGG - Chr4:64230028-64230047 MsG0480021784.01.T01:intron 40.0%
CCGTTAAAAGCTAGCTATCA+AGG - Chr4:64233169-64233188 MsG0480021784.01.T01:intron 40.0%
CGCCCTAACAAAAGAAAACT+TGG - Chr4:64229565-64229584 MsG0480021784.01.T01:intron 40.0%
CTAACAGCTGTCATATCCTA+AGG + Chr4:64230558-64230577 None:intergenic 40.0%
CTTAAAGCCTACTTTCACCT+AGG - Chr4:64232402-64232421 MsG0480021784.01.T01:intron 40.0%
CTTAGGATATGACAGCTGTT+AGG - Chr4:64230556-64230575 MsG0480021784.01.T01:intron 40.0%
GCTGGAACAACAAGAAGAAA+AGG - Chr4:64232449-64232468 MsG0480021784.01.T01:intron 40.0%
GGAAAGCCTAATATTGTGTC+AGG - Chr4:64229675-64229694 MsG0480021784.01.T01:intron 40.0%
GTTAGCCAACACGAATCAAT+TGG + Chr4:64232205-64232224 None:intergenic 40.0%
TAGGACCTCGAATGTAAATG+TGG - Chr4:64230575-64230594 MsG0480021784.01.T01:intron 40.0%
TATCAGTTTGCCCGAGATTT+GGG + Chr4:64232531-64232550 None:intergenic 40.0%
TCATGAAGAGCAAGTATGCA+AGG + Chr4:64230876-64230895 None:intergenic 40.0%
TCTTGCCCTGACACAATATT+AGG + Chr4:64229684-64229703 None:intergenic 40.0%
TGAGGATCACAAATTAAGGG+AGG - Chr4:64229757-64229776 MsG0480021784.01.T01:intron 40.0%
TGATAAGGAGAAACCTCCAT+TGG + Chr4:64229109-64229128 None:intergenic 40.0%
TGCAATAGAAGATTGTAGGC+TGG - Chr4:64230393-64230412 MsG0480021784.01.T01:intron 40.0%
TGGTTCTTATGAATCTGGTG+GGG + Chr4:64233310-64233329 None:intergenic 40.0%
TGGTTGCCAAGTCACATATA+TGG - Chr4:64232323-64232342 MsG0480021784.01.T01:intron 40.0%
TTACAGAGTAGCACGTGTAT+TGG + Chr4:64233658-64233677 None:intergenic 40.0%
TTATCAGTTTGCCCGAGATT+TGG + Chr4:64232532-64232551 None:intergenic 40.0%
TTGTCTACTTCAGACTATGG+AGG - Chr4:64232367-64232386 MsG0480021784.01.T01:intron 40.0%
TTGTGTTGAGGAAGAGACAA+AGG - Chr4:64229346-64229365 MsG0480021784.01.T01:intron 40.0%
TTTGAGTAGTATGGGATGCT+TGG + Chr4:64233222-64233241 None:intergenic 40.0%
! AAGGGAAATAATGGGGATTG+GGG + Chr4:64230645-64230664 None:intergenic 40.0%
! ACGAGAAATGAAAGTGTGAG+TGG - Chr4:64229484-64229503 MsG0480021784.01.T01:intron 40.0%
! CCAAGTCTTATCCCATTAAG+TGG + Chr4:64230031-64230050 None:intergenic 40.0%
! CGAGAAATGAAAGTGTGAGT+GGG - Chr4:64229485-64229504 MsG0480021784.01.T01:intron 40.0%
! CTTTTCAAATGCAGACTGCA+GGG - Chr4:64233881-64233900 MsG0480021784.01.T01:intron 40.0%
! CTTTTCCTCAACCCAAAACA+AGG - Chr4:64229720-64229739 MsG0480021784.01.T01:intron 40.0%
! GCAGAAGCTCTTTTAATGGT+TGG - Chr4:64232015-64232034 MsG0480021784.01.T01:intron 40.0%
! GTGGAAGGTGATCGATTTAA+AGG + Chr4:64233694-64233713 None:intergenic 40.0%
! GTTGGTTCTTATGAATCTGG+TGG + Chr4:64233312-64233331 None:intergenic 40.0%
! GTTGTGATTGTTGTTGCTCT+TGG - Chr4:64232990-64233009 MsG0480021784.01.T01:intron 40.0%
! TCTTTTCAAATGCAGACTGC+AGG - Chr4:64233880-64233899 MsG0480021784.01.T01:intron 40.0%
!! AAGACTCTAAGGCTGTTGAT+AGG + Chr4:64230713-64230732 None:intergenic 40.0%
!! ATGAGTACTGATGATGAGGA+TGG - Chr4:64233597-64233616 MsG0480021784.01.T01:CDS 40.0%
!! GAAATGTACAGAAGTGTCCT+AGG + Chr4:64232819-64232838 None:intergenic 40.0%
!!! ACACCAGAAACCCTTGTTTT+GGG + Chr4:64229734-64229753 None:intergenic 40.0%
!!! ATCACTAGGTTGCTTTTTGG+GGG - Chr4:64231516-64231535 MsG0480021784.01.T01:intron 40.0%
!!! CATCACTAGGTTGCTTTTTG+GGG - Chr4:64231515-64231534 MsG0480021784.01.T01:intron 40.0%
!!! GCATCACTAGGTTGCTTTTT+GGG - Chr4:64231514-64231533 MsG0480021784.01.T01:intron 40.0%
AAACCAAGCCTACAAGAACG+GGG - Chr4:64230228-64230247 MsG0480021784.01.T01:intron 45.0%
AACATCCTCTGATGCAGAGA+GGG - Chr4:64231927-64231946 MsG0480021784.01.T01:intron 45.0%
AATGCTTGTCCAATTGCTGC+TGG - Chr4:64232303-64232322 MsG0480021784.01.T01:intron 45.0%
AATGTCTCCAACCATGGAAC+AGG - Chr4:64233078-64233097 MsG0480021784.01.T01:intron 45.0%
AGACAAATCCCCGTTCTTGT+AGG + Chr4:64230239-64230258 None:intergenic 45.0%
AGAGTTGCAAATGGCACAGA+TGG + Chr4:64229651-64229670 None:intergenic 45.0%
AGCTGAGAGTCGAACATCAA+GGG - Chr4:64229138-64229157 MsG0480021784.01.T01:CDS 45.0%
AGTCTGGCTATAGCTCTTGA+TGG - Chr4:64234066-64234085 MsG0480021784.01.T01:CDS 45.0%
AGTTGCAAATGGCACAGATG+GGG + Chr4:64229649-64229668 None:intergenic 45.0%
AGTTGCGAGGGAAGATAGAA+AGG - Chr4:64229289-64229308 MsG0480021784.01.T01:intron 45.0%
ATAGGGACCTGGGTATTATG+GGG - Chr4:64233107-64233126 MsG0480021784.01.T01:intron 45.0%
ATCAGTTTGCCCGAGATTTG+GGG + Chr4:64232530-64232549 None:intergenic 45.0%
ATGAGAGTAGTGAAGTTGCG+AGG - Chr4:64229276-64229295 MsG0480021784.01.T01:intron 45.0%
ATGGCATCGTTTGATCCATG+TGG - Chr4:64230000-64230019 MsG0480021784.01.T01:intron 45.0%
ATGTGGACGACCCACTTAAT+GGG - Chr4:64230017-64230036 MsG0480021784.01.T01:intron 45.0%
CAACCCAAAACAAGGGTTTC+TGG - Chr4:64229728-64229747 MsG0480021784.01.T01:intron 45.0%
CAACTACGCGCCAAACATAA+AGG - Chr4:64229611-64229630 MsG0480021784.01.T01:intron 45.0%
CAAGAACGGGGATTTGTCTA+TGG - Chr4:64230240-64230259 MsG0480021784.01.T01:intron 45.0%
CACCTAGGAAAGCTTGAAGA+GGG - Chr4:64232417-64232436 MsG0480021784.01.T01:intron 45.0%
CCATGGAACAGGATTCTGAT+AGG - Chr4:64233089-64233108 MsG0480021784.01.T01:intron 45.0%
CCTATCAGAATCCTGTTCCA+TGG + Chr4:64233092-64233111 None:intergenic 45.0%
CTCCGAGATGCTTGTTCTTT+AGG + Chr4:64230301-64230320 None:intergenic 45.0%
GAAACCAAGCCTACAAGAAC+GGG - Chr4:64230227-64230246 MsG0480021784.01.T01:intron 45.0%
GAGTTGCAAATGGCACAGAT+GGG + Chr4:64229650-64229669 None:intergenic 45.0%
GATAGGGACCTGGGTATTAT+GGG - Chr4:64233106-64233125 MsG0480021784.01.T01:intron 45.0%
GCATCCCATACTACTCAAAG+TGG - Chr4:64233223-64233242 MsG0480021784.01.T01:intron 45.0%
GCTGCTATGTTATAGCAACC+TGG - Chr4:64230336-64230355 MsG0480021784.01.T01:intron 45.0%
GGAAACCAAGCCTACAAGAA+CGG - Chr4:64230226-64230245 MsG0480021784.01.T01:intron 45.0%
GGAAGAGACAAAGGATGAGT+CGG - Chr4:64229355-64229374 MsG0480021784.01.T01:intron 45.0%
GGAGAAAATGTCTCCAACCA+TGG - Chr4:64233072-64233091 MsG0480021784.01.T01:intron 45.0%
GGCTTCAGATTCAGCATCAT+CGG + Chr4:64229434-64229453 None:intergenic 45.0%
GGGGCCGTACTAATATAGAT+AGG - Chr4:64231654-64231673 MsG0480021784.01.T01:intron 45.0%
GGTGGGGACTAGGATATTAT+GGG + Chr4:64233294-64233313 None:intergenic 45.0%
GTCAACACGAAGTGACTCAT+TGG + Chr4:64229179-64229198 None:intergenic 45.0%
GTCTGAGAGTTGTTCACCAA+TGG - Chr4:64229090-64229109 MsG0480021784.01.T01:CDS 45.0%
GTCTGGCTATAGCTCTTGAT+GGG - Chr4:64234067-64234086 MsG0480021784.01.T01:CDS 45.0%
GTGGGGACTAGGATATTATG+GGG + Chr4:64233293-64233312 None:intergenic 45.0%
TAGCTGAGAGTCGAACATCA+AGG - Chr4:64229137-64229156 MsG0480021784.01.T01:CDS 45.0%
TCACCTAGGAAAGCTTGAAG+AGG - Chr4:64232416-64232435 MsG0480021784.01.T01:intron 45.0%
TCAGAATCCTGTTCCATGGT+TGG + Chr4:64233088-64233107 None:intergenic 45.0%
TCAGCTGAGTAGATATGAGG+AGG - Chr4:64232239-64232258 MsG0480021784.01.T01:intron 45.0%
TGAAAACATGGCCCTGCTTT+AGG - Chr4:64231567-64231586 MsG0480021784.01.T01:intron 45.0%
TGAAGAGGGTCTTTCTTTGC+TGG - Chr4:64232431-64232450 MsG0480021784.01.T01:intron 45.0%
TGAGAGTAGTGAAGTTGCGA+GGG - Chr4:64229277-64229296 MsG0480021784.01.T01:intron 45.0%
TGAGAGTTGTTCACCAATGG+AGG - Chr4:64229093-64229112 MsG0480021784.01.T01:CDS 45.0%
TGAGCCCACATTTACATTCG+AGG + Chr4:64230583-64230602 None:intergenic 45.0%
TGATAGGGACCTGGGTATTA+TGG - Chr4:64233105-64233124 MsG0480021784.01.T01:intron 45.0%
TGATGCCCAAAGTCCAACAT+TGG + Chr4:64231500-64231519 None:intergenic 45.0%
TGCAGGGAATGAAGCATATC+AGG - Chr4:64233897-64233916 MsG0480021784.01.T01:intron 45.0%
TGGTGGGGACTAGGATATTA+TGG + Chr4:64233295-64233314 None:intergenic 45.0%
TTATGAATCTGGTGGGGACT+AGG + Chr4:64233304-64233323 None:intergenic 45.0%
TTGCAAGAAGATCGTCCTCA+GGG - Chr4:64229064-64229083 MsG0480021784.01.T01:CDS 45.0%
TTGGATACCCCATAATACCC+AGG + Chr4:64233117-64233136 None:intergenic 45.0%
TTGTACAGGCCCATTCCAAT+AGG - Chr4:64233626-64233645 MsG0480021784.01.T01:CDS 45.0%
TTTGCAAGAAGATCGTCCTC+AGG - Chr4:64229063-64229082 MsG0480021784.01.T01:CDS 45.0%
! AATGAAAGTGTGAGTGGGTC+TGG - Chr4:64229490-64229509 MsG0480021784.01.T01:intron 45.0%
! ACAAAGGATGAGTCGGTTTC+TGG - Chr4:64229362-64229381 MsG0480021784.01.T01:intron 45.0%
! AGCTTTGATACTGTCCTTGC+AGG - Chr4:64232597-64232616 MsG0480021784.01.T01:intron 45.0%
! CAAAGGATGAGTCGGTTTCT+GGG - Chr4:64229363-64229382 MsG0480021784.01.T01:intron 45.0%
! CTGTGCCTTTTGTAAGCCAT+CGG + Chr4:64231081-64231100 None:intergenic 45.0%
! GCCGCTGCATATAAAGTGTT+AGG - Chr4:64234015-64234034 MsG0480021784.01.T01:CDS 45.0%
! TAAGTCTGCTAGTGATAGCG+TGG - Chr4:64229402-64229421 MsG0480021784.01.T01:intron 45.0%
!! AAGGGTTTCTGGTGTGAATG+AGG - Chr4:64229739-64229758 MsG0480021784.01.T01:intron 45.0%
!! CACACCAGAAACCCTTGTTT+TGG + Chr4:64229735-64229754 None:intergenic 45.0%
!! GAGGAGTGTGAATGGGTTAT+AGG + Chr4:64232505-64232524 None:intergenic 45.0%
!! GTGCCATTTGCAACTCTTAC+TGG - Chr4:64229654-64229673 MsG0480021784.01.T01:intron 45.0%
!!! GAAACCCTTGTTTTGGGTTG+AGG + Chr4:64229728-64229747 None:intergenic 45.0%
!!! GCTTTTTGGGGGGTATTGTA+AGG - Chr4:64231527-64231546 MsG0480021784.01.T01:intron 45.0%
!!! GGCATCACTAGGTTGCTTTT+TGG - Chr4:64231513-64231532 MsG0480021784.01.T01:intron 45.0%
!!! TCACTAGGTTGCTTTTTGGG+GGG - Chr4:64231517-64231536 MsG0480021784.01.T01:intron 45.0%
!! AACAAAAATTAAAATATAAA+TGG + Chr4:64232730-64232749 None:intergenic 5.0%
!! ATTAAAAATAATTAACAAAA+AGG + Chr4:64231172-64231191 None:intergenic 5.0%
AATCAGTTAGGAAGAGGGGG+TGG + Chr4:64231839-64231858 None:intergenic 50.0%
AATCCCCGTTCTTGTAGGCT+TGG + Chr4:64230234-64230253 None:intergenic 50.0%
ACAGGATTCTGATAGGGACC+TGG - Chr4:64233096-64233115 MsG0480021784.01.T01:intron 50.0%
ACGCGAGCTCTTGCATCATA+AGG - Chr4:64232667-64232686 MsG0480021784.01.T01:CDS 50.0%
ACTCCTCTTCCCCAAATCTC+GGG - Chr4:64232518-64232537 MsG0480021784.01.T01:intron 50.0%
ACTTGGCAACCAGCAGCAAT+TGG + Chr4:64232315-64232334 None:intergenic 50.0%
AGCAGAAGAAGCAGCTGCAA+AGG + Chr4:64229521-64229540 None:intergenic 50.0%
AGCCTCCGATGGCTTACAAA+AGG - Chr4:64231073-64231092 MsG0480021784.01.T01:CDS 50.0%
ATTTCAGTGGAAGCCTCCGA+TGG - Chr4:64231062-64231081 MsG0480021784.01.T01:intron 50.0%
CACTCCTCTTCCCCAAATCT+CGG - Chr4:64232517-64232536 MsG0480021784.01.T01:intron 50.0%
CAGGATTCTGATAGGGACCT+GGG - Chr4:64233097-64233116 MsG0480021784.01.T01:intron 50.0%
CATGTGGACGACCCACTTAA+TGG - Chr4:64230016-64230035 MsG0480021784.01.T01:intron 50.0%
CATTAAGTGGGTCGTCCACA+TGG + Chr4:64230018-64230037 None:intergenic 50.0%
CCACACACATGTCTCTTGGT+AGG - Chr4:64230362-64230381 MsG0480021784.01.T01:intron 50.0%
CCTACCAAGAGACATGTGTG+TGG + Chr4:64230365-64230384 None:intergenic 50.0%
CTGCCGAAGCATGTGAAAAG+TGG - Chr4:64229795-64229814 MsG0480021784.01.T01:intron 50.0%
GAACATCCTCTGATGCAGAG+AGG - Chr4:64231926-64231945 MsG0480021784.01.T01:intron 50.0%
GACCCTCTTCAAGCTTTCCT+AGG + Chr4:64232422-64232441 None:intergenic 50.0%
GAGTAGAGAAGCAAGGTGGA+AGG + Chr4:64233709-64233728 None:intergenic 50.0%
GAGTAGTATGGGATGCTTGG+TGG + Chr4:64233219-64233238 None:intergenic 50.0%
GCGAAATCGGAGTGTGGTAT+AGG - Chr4:64229314-64229333 MsG0480021784.01.T01:intron 50.0%
GGCACAGATGGGGATGAATA+AGG + Chr4:64229639-64229658 None:intergenic 50.0%
GGGAATGAAGCATATCAGGC+TGG - Chr4:64233901-64233920 MsG0480021784.01.T01:intron 50.0%
GGGTTGAGGAAAAGACACTC+TGG + Chr4:64229714-64229733 None:intergenic 50.0%
GTGCAAGGTTGGAATGGACA+TGG - Chr4:64229019-64229038 MsG0480021784.01.T01:CDS 50.0%
GTTGGACTTTGGGCATCACT+AGG - Chr4:64231502-64231521 MsG0480021784.01.T01:intron 50.0%
TGATACTGTCCTTGCAGGAG+TGG - Chr4:64232602-64232621 MsG0480021784.01.T01:intron 50.0%
TGCAATCGCAGATTGCAGTC+TGG - Chr4:64234050-64234069 MsG0480021784.01.T01:CDS 50.0%
TGCGAGGGAAGATAGAAAGG+AGG - Chr4:64229292-64229311 MsG0480021784.01.T01:intron 50.0%
TGTCCATTCCAACCTTGCAC+AGG + Chr4:64229019-64229038 None:intergenic 50.0%
! CAGGAGTGGAAGCAAGGTTT+TGG - Chr4:64232616-64232635 MsG0480021784.01.T01:intron 50.0%
! CGATGGCTTACAAAAGGCAC+AGG - Chr4:64231079-64231098 MsG0480021784.01.T01:CDS 50.0%
! GGTTGGAGACATTTTCTCCC+CGG + Chr4:64233071-64233090 None:intergenic 50.0%
! TGCCTTTTGTAAGCCATCGG+AGG + Chr4:64231078-64231097 None:intergenic 50.0%
! TGGGGAAGAGGAGTGTGAAT+GGG + Chr4:64232512-64232531 None:intergenic 50.0%
! TTGGGGAAGAGGAGTGTGAA+TGG + Chr4:64232513-64232532 None:intergenic 50.0%
!!! GCGCCACTTTTCACATGCTT+CGG + Chr4:64229801-64229820 None:intergenic 50.0%
AAGCATCTCGGAGCTGTCTC+AGG - Chr4:64230308-64230327 MsG0480021784.01.T01:intron 55.0%
AAGGAGGCGAAATCGGAGTG+TGG - Chr4:64229308-64229327 MsG0480021784.01.T01:intron 55.0%
ACCTTGCTTCCACTCCTGCA+AGG + Chr4:64232614-64232633 None:intergenic 55.0%
AGCATCTCGGAGCTGTCTCA+GGG - Chr4:64230309-64230328 MsG0480021784.01.T01:intron 55.0%
ATGCAAGAGCTCGCGTACAG+TGG + Chr4:64232663-64232682 None:intergenic 55.0%
CAACTCTCAGACGAACCCTG+AGG + Chr4:64229082-64229101 None:intergenic 55.0%
CAATGCCCTCTCTGCATCAG+AGG + Chr4:64231935-64231954 None:intergenic 55.0%
CATGTGAAAAGTGGCGCCTC+CGG - Chr4:64229804-64229823 MsG0480021784.01.T01:intron 55.0%
GAGGTCTCGAAATGGGGACT+TGG - Chr4:64233264-64233283 MsG0480021784.01.T01:intron 55.0%
GCACCTGTGCAAGGTTGGAA+TGG - Chr4:64229013-64229032 MsG0480021784.01.T01:CDS 55.0%
GCTGCCACACACATGTCTCT+TGG - Chr4:64230358-64230377 MsG0480021784.01.T01:intron 55.0%
GTGGTTGAATACGGCAGCTG+TGG + Chr4:64231370-64231389 None:intergenic 55.0%
TCCTTGCAGGAGTGGAAGCA+AGG - Chr4:64232610-64232629 MsG0480021784.01.T01:intron 55.0%
TTCCAACCTTGCACAGGTGC+CGG + Chr4:64229013-64229032 None:intergenic 55.0%
TTGCCCGAGATTTGGGGAAG+AGG + Chr4:64232524-64232543 None:intergenic 55.0%
! CTCTGATGCAGAGAGGGCAT+TGG - Chr4:64231933-64231952 MsG0480021784.01.T01:intron 55.0%
! GCTGAATCTGAAGCCCGTGA+TGG - Chr4:64229439-64229458 MsG0480021784.01.T01:intron 55.0%
GAGACATGTGTGTGGCAGCC+AGG + Chr4:64230357-64230376 None:intergenic 60.0%
GGCAGCTGTGGCTGCAAATG+TGG + Chr4:64231358-64231377 None:intergenic 60.0%
TCGCGTACAGTGGCAGCTAG+TGG + Chr4:64232653-64232672 None:intergenic 60.0%
TCTACACCGGCACCTGTGCA+AGG - Chr4:64229004-64229023 MsG0480021784.01.T01:CDS 60.0%
CACCGGCACCTGTGCAAGGT+TGG - Chr4:64229008-64229027 MsG0480021784.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 64228974 64234149 64228974 ID=MsG0480021784.01;Name=MsG0480021784.01
Chr4 mRNA 64228974 64234149 64228974 ID=MsG0480021784.01.T01;Parent=MsG0480021784.01;Name=MsG0480021784.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0.62|0.44|1|1|1|9|0|540
Chr4 exon 64233941 64234149 64233941 ID=MsG0480021784.01.T01:exon:17894;Parent=MsG0480021784.01.T01
Chr4 exon 64233536 64233709 64233536 ID=MsG0480021784.01.T01:exon:17893;Parent=MsG0480021784.01.T01
Chr4 exon 64233298 64233426 64233298 ID=MsG0480021784.01.T01:exon:17892;Parent=MsG0480021784.01.T01
Chr4 exon 64232659 64232898 64232659 ID=MsG0480021784.01.T01:exon:17891;Parent=MsG0480021784.01.T01
Chr4 exon 64232023 64232152 64232023 ID=MsG0480021784.01.T01:exon:17890;Parent=MsG0480021784.01.T01
Chr4 exon 64231073 64231243 64231073 ID=MsG0480021784.01.T01:exon:17889;Parent=MsG0480021784.01.T01
Chr4 exon 64230636 64230880 64230636 ID=MsG0480021784.01.T01:exon:17888;Parent=MsG0480021784.01.T01
Chr4 exon 64230435 64230504 64230435 ID=MsG0480021784.01.T01:exon:17887;Parent=MsG0480021784.01.T01
Chr4 exon 64228974 64229228 64228974 ID=MsG0480021784.01.T01:exon:17886;Parent=MsG0480021784.01.T01
Chr4 CDS 64233941 64234149 64233941 ID=MsG0480021784.01.T01:cds;Parent=MsG0480021784.01.T01
Chr4 CDS 64233536 64233709 64233536 ID=MsG0480021784.01.T01:cds;Parent=MsG0480021784.01.T01
Chr4 CDS 64233298 64233426 64233298 ID=MsG0480021784.01.T01:cds;Parent=MsG0480021784.01.T01
Chr4 CDS 64232659 64232898 64232659 ID=MsG0480021784.01.T01:cds;Parent=MsG0480021784.01.T01
Chr4 CDS 64232023 64232152 64232023 ID=MsG0480021784.01.T01:cds;Parent=MsG0480021784.01.T01
Chr4 CDS 64231073 64231243 64231073 ID=MsG0480021784.01.T01:cds;Parent=MsG0480021784.01.T01
Chr4 CDS 64230636 64230880 64230636 ID=MsG0480021784.01.T01:cds;Parent=MsG0480021784.01.T01
Chr4 CDS 64230435 64230504 64230435 ID=MsG0480021784.01.T01:cds;Parent=MsG0480021784.01.T01
Chr4 CDS 64228974 64229228 64228974 ID=MsG0480021784.01.T01:cds;Parent=MsG0480021784.01.T01
Gene Sequence

>MsG0480021784.01.T01

ATGAATAGAAGTAGAGTGAATTTGAAGCATTCTACACCGGCACCTGTGCAAGGTTGGAATGGACATGGTTTTGTTTTTAAAGGAAGTGTTTTGCAAGAAGATCGTCCTCAGGGTTCGTCTGAGAGTTGTTCACCAATGGAGGTTTCTCCTTATCAGGAAAAACTAGCTGAGAGTCGAACATCAAGGGAAAGTTCTGTGAATTCCAATGATGATAGCGTGGACGTGACCGATGATGCTGAATCTGAAGCCCGTGATGGTGATAGAATGTTGAATTTTGGTACGAGAAATGAAAGTGTGAGTGGGTCTGGCTTCACCTTTGCAGCTGCTTCTTCTGCTGAAGCTCAATTGTCTAGCCCAAAACGCCCTAACAAAAGAAAACTTGGGGCAAGACATAAAGCCAGAGTGTCTTTTCCTCAACCCAAAACAAGGGTTTCTGGTGTGAATGAGGATCACAAATTAAGGGAGGATTCTGCTTCTGTTTCTGCCGAAGCATGTGAAAAGTGGCGCCTCCGAGGAAACCAAGCCTACAAGAACGGGGATTTGTCTATGGCTGAGAGTTATTACAAACAAGGACTTGGTTGTGTACCTAAAGAACAAGCATCTCGGAGCTGTCTCAGGGCTTTGCTGCTATGTTATAGCAACCTGGCTGCCACACACATGTCTCTTGGTAGGATGAGAGATGCAATAGAAGATTGTAGGCTGGCTGCTGAAATAGATCAAAATTTTCTCAAGGTGCAACTTAGAGCTGCAAATTGTTATCTTGCTCTGGGAGAAGTTGAAGCTGCATCACAATATTTCAAAATGTGCTTGCAATCAGGAGCTGATGTTTCTGTAGATCGTAAGATTTCAGTGGAAGCCTCCGATGGCTTACAAAAGGCACAGAAAGTATCAGATTCTATTTATCATTCTGCTGAGCTTTTGCAAAGAAGAACATCCTCTGATGCAGAGAGGGCATTGGAACATATTAATGAGGCGTTGATGATCAGTATGCACTCTGAAAAATTGCTTGAAATGAAAGCAGAAGCTCTTTTAATGGTTGGTGTTTCTTCTGTACTGAGTAGATATGAGGAGGTGATTCATCAGTGTGACAAGACTCTTAGTTCTGCTGAGAAGAATGCTTGTCCAATTGCTGCTGGTTGCCAAGTCACATATATGGATATTTCAGAACTCTCAAAAGTTGTCTACTTCAGACTATGGAGGTGTTCAATGATGCTTAAAGCCTACTTTCACCTAGGAAAGCTTGAAGAGGGTCTTTCTTTGCTGGAACAACAAGAAGAAAAGGTGTCTGCCATAAACAAGAGTGGAAGCAAGGTTTTGGTTTCACTTATACCACTAGCTGCCACTGTACGCGAGCTCTTGCATCATAAGACTGCAGGGAATGAAGCATATCAGGCTGGAAGACACGCAGAAGCTGTTGAACACTATACATCTGTTTTATCTTGTAATTTGGAGTCTCGTCCATTTGCAGCTGTCTGTTATTGCAATCGTGCCGCTGCATATAAAGTGTTAGGTCAAATAACTGATGCAATCGCAGATTGCAGTCTGGCTATAGCTCTTGATGGGAATTATTTAAAGGTTTCTCTCTTCAACTGGCACTTCCTTCTTTTTTATGTAGTTGTTTAA

Protein sequence

>MsG0480021784.01.T01

MNRSRVNLKHSTPAPVQGWNGHGFVFKGSVLQEDRPQGSSESCSPMEVSPYQEKLAESRTSRESSVNSNDDSVDVTDDAESEARDGDRMLNFGTRNESVSGSGFTFAAASSAEAQLSSPKRPNKRKLGARHKARVSFPQPKTRVSGVNEDHKLREDSASVSAEACEKWRLRGNQAYKNGDLSMAESYYKQGLGCVPKEQASRSCLRALLLCYSNLAATHMSLGRMRDAIEDCRLAAEIDQNFLKVQLRAANCYLALGEVEAASQYFKMCLQSGADVSVDRKISVEASDGLQKAQKVSDSIYHSAELLQRRTSSDAERALEHINEALMISMHSEKLLEMKAEALLMVGVSSVLSRYEEVIHQCDKTLSSAEKNACPIAAGCQVTYMDISELSKVVYFRLWRCSMMLKAYFHLGKLEEGLSLLEQQEEKVSAINKSGSKVLVSLIPLAATVRELLHHKTAGNEAYQAGRHAEAVEHYTSVLSCNLESRPFAAVCYCNRAAAYKVLGQITDAIADCSLAIALDGNYLKVSLFNWHFLLFYVVV*