AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041161.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041161.01.T01 MTR_7g105430 98.353 668 11 0 14 681 1 668 0.0 1346
MsG0780041161.01.T01 MTR_4g052400 43.123 538 258 16 20 545 22 523 6.00e-109 343
MsG0780041161.01.T01 MTR_2g086890 40.221 634 295 27 20 617 14 599 4.35e-100 320
MsG0780041161.01.T01 MTR_4g052400 45.646 333 161 8 220 545 42 361 6.07e-76 252
MsG0780041161.01.T01 MTR_5g009750 34.390 410 249 7 46 451 20 413 1.92e-56 203
MsG0780041161.01.T01 MTR_8g028230 28.883 412 240 10 43 450 18 380 1.46e-36 145
MsG0780041161.01.T01 MTR_3g051430 32.055 365 194 9 100 454 102 422 4.12e-35 142
MsG0780041161.01.T01 MTR_5g092610 39.691 194 117 0 257 450 208 401 4.76e-33 135
MsG0780041161.01.T01 MTR_8g028230 26.161 409 214 8 43 450 18 339 7.64e-30 124
MsG0780041161.01.T01 MTR_8g028230 30.544 239 165 1 213 450 55 293 1.94e-27 116
MsG0780041161.01.T01 MTR_8g028230 29.771 262 180 3 193 450 5 266 2.68e-27 115
MsG0780041161.01.T01 MTR_2g023020 39.791 191 115 0 260 450 174 364 3.92e-25 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041161.01.T01 AT3G11590 57.764 644 210 22 1 628 1 598 0.0 600
MsG0780041161.01.T01 AT3G11590 59.829 468 151 14 166 628 1 436 1.20e-156 460
MsG0780041161.01.T01 AT5G22310 35.067 519 224 17 21 534 9 419 7.50e-56 198
MsG0780041161.01.T01 AT1G50660 32.899 307 176 4 234 517 212 511 5.87e-38 151
MsG0780041161.01.T01 AT5G41620 28.074 488 296 9 100 568 46 497 4.31e-37 147
MsG0780041161.01.T01 AT5G41620 29.381 388 241 5 183 568 24 380 1.35e-35 141
MsG0780041161.01.T01 AT5G41620 29.381 388 241 5 183 568 24 380 1.35e-35 141
MsG0780041161.01.T01 AT5G41620 29.700 367 225 5 204 568 3 338 2.30e-33 134
MsG0780041161.01.T01 AT3G20350 37.629 194 121 0 257 450 211 404 2.39e-33 136
MsG0780041161.01.T01 AT1G64180 30.337 356 180 9 45 386 31 332 2.14e-29 124
MsG0780041161.01.T01 AT2G46250 28.571 385 204 12 43 424 13 329 3.03e-22 100
MsG0780041161.01.T01 AT2G46250 34.615 208 116 4 217 424 51 238 7.99e-20 92.4

Find 172 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTCTTGGAAGCTATTTA+TGG 0.131870 7:-87373317 None:intergenic
GCGCTATTCTTGTAGGTAAA+AGG 0.213564 7:+87370178 MsG0780041161.01.T01:CDS
CTATTCCATCTCCTGAGTTT+TGG 0.222833 7:-87373108 None:intergenic
TAAATCAGTGAAAGGATTAA+AGG 0.286783 7:+87373204 MsG0780041161.01.T01:CDS
CAGTATGCAGAGCTGATATA+AGG 0.298646 7:-87372163 None:intergenic
AAGAAGTTAAAACAAAAGAT+AGG 0.326485 7:+87370433 MsG0780041161.01.T01:CDS
ATCAAATACTAGCTGGTTCC+AGG 0.332122 7:+87373227 MsG0780041161.01.T01:CDS
ATTTAATAAGGAAGTCTAAA+AGG 0.333697 7:+87373404 MsG0780041161.01.T01:CDS
AAATGGAGAAAAGCTTCTTT+TGG 0.335316 7:-87373490 None:intergenic
ACTGCTAGGTCTATTCGTTC+TGG 0.342193 7:+87370462 MsG0780041161.01.T01:CDS
CTCTCTTGGAAGCTATTTAT+GGG 0.346422 7:-87373316 None:intergenic
CCAATCGAGGAAGAAATAAA+AGG 0.350026 7:+87372986 MsG0780041161.01.T01:CDS
CTTCTTTATCTTCAGTATGA+TGG 0.351025 7:-87372817 None:intergenic
TTGCCGAAGAAAAGGCTTCT+TGG 0.356338 7:+87372273 MsG0780041161.01.T01:CDS
GTGAGGCTCATAATTTAATA+AGG 0.357238 7:+87373392 MsG0780041161.01.T01:CDS
ACATCACCATGTTGGTCCTT+TGG 0.357896 7:+87370911 MsG0780041161.01.T01:CDS
TTCAAACGCGCTATTCTTGT+AGG 0.362288 7:+87370171 MsG0780041161.01.T01:CDS
CGCTATTCTTGTAGGTAAAA+GGG 0.369576 7:+87370179 MsG0780041161.01.T01:CDS
CTCAACAATTTCTCGCTCCT+TGG 0.369601 7:-87372300 None:intergenic
TATATCAGATGGAGTGGAAT+GGG 0.374464 7:+87373063 MsG0780041161.01.T01:CDS
GCATTCTATAGAGTTAAATA+TGG 0.379581 7:+87372898 MsG0780041161.01.T01:CDS
GGAAACTAGCGGCGACGCTT+TGG 0.390664 7:+87370349 MsG0780041161.01.T01:CDS
CATGCTACAATGCAGGGAAA+TGG 0.394503 7:+87373340 MsG0780041161.01.T01:CDS
CCACCGCCACCGTCGCAATC+GGG 0.400595 7:+87370294 MsG0780041161.01.T01:CDS
TCCACCGCCACCGTCGCAAT+CGG 0.403622 7:+87370293 MsG0780041161.01.T01:CDS
TTGACCAATATGAGTAAGTA+TGG 0.406666 7:+87373567 MsG0780041161.01.T01:three_prime_UTR
GCATTGTAGCATGTCTCTCT+TGG 0.406927 7:-87373330 None:intergenic
GAAACTAGCGGCGACGCTTT+GGG 0.408314 7:+87370350 MsG0780041161.01.T01:CDS
ATACTAGCTGGTTCCAGGCT+TGG 0.420308 7:+87373232 MsG0780041161.01.T01:CDS
GATTCCTTCGCCTAGTGTTA+AGG 0.423275 7:+87370383 MsG0780041161.01.T01:CDS
AGGGGTCTGTGCTCGAGATC+TGG 0.425971 7:-87372012 None:intergenic
TCTCTCCTCGCGTAACATAT+CGG 0.429027 7:-87372612 None:intergenic
ACAATGGACATGATGATTCC+TGG 0.430441 7:+87370078 MsG0780041161.01.T01:CDS
AAGACCATACTTACTCATAT+TGG 0.436799 7:-87373571 None:intergenic
GGTTGTGAAAATTGTCTAGT+TGG 0.437193 7:-87373277 None:intergenic
AATCAAGGTTAGGGGAAGCC+AGG 0.438109 7:+87373368 MsG0780041161.01.T01:CDS
GCTGGAGAGGGCTCGCCTAC+AGG 0.447781 7:+87372187 MsG0780041161.01.T01:CDS
AGAATGGATCGATCTGGAAT+TGG 0.448538 7:+87370834 MsG0780041161.01.T01:CDS
TCTCCTTTGTTTATCTATCT+CGG 0.449144 7:-87372534 None:intergenic
AGAATGCAGGTCACTTTCAC+CGG 0.449342 7:-87372882 None:intergenic
CAGCAAACAAGTAAGAGAAA+AGG 0.450636 7:+87372727 MsG0780041161.01.T01:CDS
ACATGTGTTATAAGTATAAC+CGG 0.451059 7:+87373610 MsG0780041161.01.T01:three_prime_UTR
AGCAAACAAGTAAGAGAAAA+GGG 0.451711 7:+87372728 MsG0780041161.01.T01:CDS
TTCTTTATCTTCAGTATGAT+GGG 0.453148 7:-87372816 None:intergenic
GCTAGTTTCCTCGCCGATAC+CGG 0.457520 7:-87370336 None:intergenic
CCCGATTGCGACGGTGGCGG+TGG 0.458522 7:-87370294 None:intergenic
AACAAAATCAACTACAACAA+TGG 0.458687 7:+87370062 MsG0780041161.01.T01:CDS
ATGCTACAATGCAGGGAAAT+GGG 0.460604 7:+87373341 MsG0780041161.01.T01:CDS
TCTGATCTGAACGTTGTTCG+TGG 0.462528 7:-87372223 None:intergenic
GCTGCAATTGAATCTGTTGC+AGG 0.462769 7:+87372323 MsG0780041161.01.T01:CDS
CCTAGCAAGGGGTATTTGCT+TGG 0.468336 7:-87373462 None:intergenic
AAAGCTTGAACAAGAAGCTT+GGG 0.470601 7:+87372384 MsG0780041161.01.T01:CDS
GACGAAAGCATCCCTTCTTA+AGG 0.477775 7:+87372421 MsG0780041161.01.T01:CDS
GTTCTTTCACCACCTTAAGA+AGG 0.483351 7:-87372433 None:intergenic
ATCGAAGCAAGCTCCGGTAT+CGG 0.484738 7:+87370323 MsG0780041161.01.T01:CDS
CAAGAAGCTTGGGAGAGAAC+TGG 0.488096 7:+87372394 MsG0780041161.01.T01:CDS
CTATCTCTGGAAGAGCTTCA+AGG 0.490263 7:+87373017 MsG0780041161.01.T01:CDS
AGTATGCAGAGCTGATATAA+GGG 0.490595 7:-87372162 None:intergenic
TGATGATTCCTGGTAAAATA+CGG 0.490936 7:+87370088 MsG0780041161.01.T01:CDS
GGGTATTTGCTTGGCAAACA+AGG 0.495675 7:-87373453 None:intergenic
AGAAGTTAAAACAAAAGATA+GGG 0.496175 7:+87370434 MsG0780041161.01.T01:CDS
TTGTAGAGAATGGATCGATC+TGG 0.497428 7:+87370828 MsG0780041161.01.T01:intron
AAAGGTAGGAGGTCTATCTC+TGG 0.501270 7:+87373004 MsG0780041161.01.T01:CDS
ACTCAGGAGATGGAATAGAC+TGG 0.502001 7:+87373113 MsG0780041161.01.T01:CDS
GAAAGCTTGAACAAGAAGCT+TGG 0.502670 7:+87372383 MsG0780041161.01.T01:CDS
AACAGTTTCCACGTAGGTAC+GGG 0.503040 7:-87370219 None:intergenic
GAGTAAATCGAAGCAAGCTC+CGG 0.503122 7:+87370317 MsG0780041161.01.T01:CDS
TTCTTCGTCGTTCAAGTGCG+TGG 0.507442 7:-87372759 None:intergenic
TTTGGAGCTTCTCATCACCT+TGG 0.507910 7:-87373090 None:intergenic
TAACAGTTTCCACGTAGGTA+CGG 0.514838 7:-87370220 None:intergenic
ACTGAAGATAAAGAAGATGA+TGG 0.515684 7:+87372824 MsG0780041161.01.T01:CDS
ACTCCCACGGTAGATGAAGC+AGG 0.518052 7:-87372032 None:intergenic
ATCAGCTCTGCATACTGAGC+TGG 0.520095 7:+87372169 MsG0780041161.01.T01:CDS
CCAAGCAAATACCCCTTGCT+AGG 0.520997 7:+87373462 MsG0780041161.01.T01:three_prime_UTR
TTCTTTCACCACCTTAAGAA+GGG 0.523005 7:-87372432 None:intergenic
TTGATGTAGAGCGGAAGCTA+AGG 0.527027 7:+87372351 MsG0780041161.01.T01:CDS
GACGGTGGCGGTGGATATCT+CGG 0.527472 7:-87370285 None:intergenic
AGTATCCGCATCGCCGACGC+TGG 0.528406 7:-87370255 None:intergenic
TTAAAGGATCAAATACTAGC+TGG 0.529312 7:+87373220 MsG0780041161.01.T01:CDS
CTCAGGAGATGGAATAGACT+GGG 0.532350 7:+87373114 MsG0780041161.01.T01:CDS
ATAAGGGACATACTAGAAGA+AGG 0.533927 7:-87372146 None:intergenic
AGAGAGACATGCTACAATGC+AGG 0.537155 7:+87373333 MsG0780041161.01.T01:CDS
GTATCAAATCTGCTTTCAGA+AGG 0.539038 7:-87372953 None:intergenic
CCACGTAGGTACGGGTGTAG+TGG 0.539598 7:-87370211 None:intergenic
ATCAAGGTTAGGGGAAGCCA+GGG 0.544554 7:+87373369 MsG0780041161.01.T01:CDS
ATATCAGATGGAGTGGAATG+GGG 0.544741 7:+87373064 MsG0780041161.01.T01:CDS
CTCCCCGATTGCGACGGTGG+CGG 0.545356 7:-87370297 None:intergenic
ACCTTTCGAAGATCCAAGCC+TGG 0.545894 7:-87373245 None:intergenic
AAGCTCCAAAACTCAGGAGA+TGG 0.545906 7:+87373103 MsG0780041161.01.T01:CDS
CGCGTTTGAATCTGTAGTTG+TGG 0.547592 7:-87370158 None:intergenic
TAAATTATGAGCCTCACCCC+TGG 0.548141 7:-87373386 None:intergenic
TCCAGGCTTGGATCTTCGAA+AGG 0.552565 7:+87373244 MsG0780041161.01.T01:CDS
ATGGGATCTCGTGAAGGCCA+AGG 0.553657 7:-87373298 None:intergenic
TTAAAATTATAAACCGCATG+TGG 0.555129 7:+87372108 MsG0780041161.01.T01:CDS
TCACGAGGTAGAGAAAGAAA+AGG 0.555289 7:+87372574 MsG0780041161.01.T01:CDS
ATGCTGCTGTTGATATGCTC+AGG 0.556277 7:+87372681 MsG0780041161.01.T01:CDS
TAAAATTATAAACCGCATGT+GGG 0.559331 7:+87372109 MsG0780041161.01.T01:CDS
TTACTCCCCGATTGCGACGG+TGG 0.559994 7:-87370300 None:intergenic
GTTAGGGGAAGCCAGGGGTG+AGG 0.562101 7:+87373375 MsG0780041161.01.T01:CDS
GTATATCAGATGGAGTGGAA+TGG 0.562653 7:+87373062 MsG0780041161.01.T01:CDS
GCGGAAGCTAAGGAGACGGT+TGG 0.563922 7:+87372361 MsG0780041161.01.T01:CDS
GTAGAGTGTCAAGAGGAATC+CGG 0.568280 7:+87372863 MsG0780041161.01.T01:CDS
CAAAGCTATAAATCAGTGAA+AGG 0.569862 7:+87373196 MsG0780041161.01.T01:CDS
TCACGCATTTCCTTAACACT+AGG 0.573536 7:-87370393 None:intergenic
GATTTACTCCCCGATTGCGA+CGG 0.573651 7:-87370303 None:intergenic
GATGAGAAGCTCCAAAACTC+AGG 0.575179 7:+87373097 MsG0780041161.01.T01:CDS
CTCTGCATACTGAGCTGGAG+AGG 0.576008 7:+87372174 MsG0780041161.01.T01:CDS
TAGTAATGCTAGTGTTATGG+AGG 0.578140 7:+87370941 MsG0780041161.01.T01:CDS
TATTTAACTCTATAGAATGC+AGG 0.578793 7:-87372895 None:intergenic
AAATCTGCTTTCAGAAGGGT+AGG 0.578866 7:-87372948 None:intergenic
GGATAAGCTGATTAACCTGT+AGG 0.578986 7:-87372202 None:intergenic
CTCGACCTGTGTGAATTGCT+CGG 0.579001 7:-87370876 None:intergenic
TTCACATAGTCCTCCATCAG+AGG 0.582500 7:+87370512 MsG0780041161.01.T01:CDS
CACCGCCACCGTCGCAATCG+GGG 0.584344 7:+87370295 MsG0780041161.01.T01:CDS
CGAGCAATTCACACAGGTCG+AGG 0.587010 7:+87370877 MsG0780041161.01.T01:CDS
GAGGAGTATATCAGATGGAG+TGG 0.588143 7:+87373057 MsG0780041161.01.T01:CDS
TCTGCATACTGAGCTGGAGA+GGG 0.588803 7:+87372175 MsG0780041161.01.T01:CDS
CTTGTAGGTAAAAGGGGAGG+CGG 0.589140 7:+87370186 MsG0780041161.01.T01:CDS
CTCCCACGGTAGATGAAGCA+GGG 0.590806 7:-87372031 None:intergenic
AGATAAAGAAGATGATGGAG+AGG 0.590807 7:+87372829 MsG0780041161.01.T01:CDS
TAAGGGACATACTAGAAGAA+GGG 0.595038 7:-87372145 None:intergenic
CTGCAGAGGAGTATATCAGA+TGG 0.596087 7:+87373052 MsG0780041161.01.T01:CDS
AATCCGAGATAGATAAACAA+AGG 0.602124 7:+87372531 MsG0780041161.01.T01:CDS
GAGAGACATGCTACAATGCA+GGG 0.603310 7:+87373334 MsG0780041161.01.T01:CDS
CAAACGTGGTTTAACTCCCA+CGG 0.603600 7:-87372045 None:intergenic
AAGATAGGGTTTCAACTGCT+AGG 0.604487 7:+87370448 MsG0780041161.01.T01:CDS
TATCAAATCTGCTTTCAGAA+GGG 0.612920 7:-87372952 None:intergenic
GATCTCCAGCGTCGGCGATG+CGG 0.614483 7:+87370250 MsG0780041161.01.T01:CDS
ACCCCTGCTTCATCTACCGT+GGG 0.614755 7:+87372029 MsG0780041161.01.T01:CDS
GGTCTTCATGACCCCACATG+CGG 0.614966 7:-87372121 None:intergenic
CTATTTATGGGATCTCGTGA+AGG 0.615326 7:-87373304 None:intergenic
AGGAAGAAATAAAAGGTAGG+AGG 0.617173 7:+87372993 MsG0780041161.01.T01:CDS
GCTATTCTTGTAGGTAAAAG+GGG 0.622409 7:+87370180 MsG0780041161.01.T01:CDS
TATCAGATGGAGTGGAATGG+GGG 0.623899 7:+87373065 MsG0780041161.01.T01:CDS
CGAAGCAAAATATCAACATG+AGG 0.624711 7:+87372652 MsG0780041161.01.T01:CDS
TCGAGGAAGAAATAAAAGGT+AGG 0.625388 7:+87372990 MsG0780041161.01.T01:CDS
CCACTACACCCGTACCTACG+TGG 0.628885 7:+87370211 MsG0780041161.01.T01:CDS
GAAAGCATCCCTTCTTAAGG+TGG 0.630764 7:+87372424 MsG0780041161.01.T01:CDS
TGTGAAGGATCAGACAAATG+AGG 0.633486 7:-87370495 None:intergenic
GAACTGGAGAAACAAGCTCA+AGG 0.637215 7:+87373148 MsG0780041161.01.T01:CDS
CAATGGTGTAGAGTGTCAAG+AGG 0.641360 7:+87372856 MsG0780041161.01.T01:CDS
GACCCCTGCTTCATCTACCG+TGG 0.641700 7:+87372028 MsG0780041161.01.T01:CDS
AAGAATCCAAAGGACCAACA+TGG 0.642047 7:-87370917 None:intergenic
TCTGATGGAGGACTATGTGA+AGG 0.643240 7:-87370510 None:intergenic
GGATAAGCACATCTCTGCAG+AGG 0.643419 7:+87373038 MsG0780041161.01.T01:CDS
TACAAGAAAATATCCAATCG+AGG 0.645942 7:+87372973 MsG0780041161.01.T01:CDS
AAGCTCGCGATCTCCAGCGT+CGG 0.647327 7:+87370242 MsG0780041161.01.T01:CDS
GATGAGTTAGCAAGAGATGT+TGG 0.652090 7:+87372500 MsG0780041161.01.T01:CDS
ATTTCCTTAACACTAGGCGA+AGG 0.652929 7:-87370387 None:intergenic
CAGGAGAACTTGATGTAGAG+CGG 0.654347 7:+87372342 MsG0780041161.01.T01:CDS
CCTGGTAAAATACGGAAACG+AGG 0.654966 7:+87370096 MsG0780041161.01.T01:CDS
AAAGGCTTCTTGGAAAACCA+AGG 0.655680 7:+87372283 MsG0780041161.01.T01:CDS
AAAATTATAAACCGCATGTG+GGG 0.658914 7:+87372110 MsG0780041161.01.T01:CDS
ACAGAACAACATCACCATGT+TGG 0.658995 7:+87370903 MsG0780041161.01.T01:CDS
TAGAGCGGAAGCTAAGGAGA+CGG 0.666989 7:+87372357 MsG0780041161.01.T01:CDS
AGCAAGCTCCGGTATCGGCG+AGG 0.668784 7:+87370328 MsG0780041161.01.T01:CDS
TTACTGACATCTTTCAAACG+TGG 0.669903 7:-87372059 None:intergenic
TCCCACGGTAGATGAAGCAG+GGG 0.671790 7:-87372030 None:intergenic
GTAGTTGTGGTTAATTACTG+AGG 0.672451 7:-87370145 None:intergenic
GTTAACCGATATGTTACGCG+AGG 0.681573 7:+87372607 MsG0780041161.01.T01:CDS
CAAGGAGCGAGAAATTGTTG+AGG 0.687082 7:+87372301 MsG0780041161.01.T01:CDS
GAAGGATCAGACAAATGAGG+AGG 0.689178 7:-87370492 None:intergenic
GGTATCGGCGAGGAAACTAG+CGG 0.689663 7:+87370338 MsG0780041161.01.T01:CDS
GATGATGGAGAGGTTGACAA+TGG 0.693762 7:+87372839 MsG0780041161.01.T01:CDS
GCATTACTAAAAGAATCCAA+AGG 0.698107 7:-87370927 None:intergenic
GTCAACAAAAGCTTGTCACG+AGG 0.701503 7:+87372559 MsG0780041161.01.T01:CDS
GAACACCGAGCAATTCACAC+AGG 0.703603 7:+87370871 MsG0780041161.01.T01:CDS
GGGACATACTAGAAGAAGGG+CGG 0.712124 7:-87372142 None:intergenic
GTTAGCAAGAGATGTTGGCG+AGG 0.717140 7:+87372505 MsG0780041161.01.T01:CDS
ATTCTTGTAGGTAAAAGGGG+AGG 0.721390 7:+87370183 MsG0780041161.01.T01:CDS
GAGCTTAACAGTTTCCACGT+AGG 0.731353 7:-87370225 None:intergenic
TCAAGGTTAGGGGAAGCCAG+GGG 0.732433 7:+87373370 MsG0780041161.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTATACATTATTTTGAA+TGG + Chr7:87371849-87371868 MsG0780041161.01.T01:intron 10.0%
!! AAACACTGATAAATTATTAT+TGG - Chr7:87371215-87371234 None:intergenic 15.0%
!! AAATTATCAAAGAGTTAAGA+GGG - Chr7:87371923-87371942 None:intergenic 20.0%
!! AAGAAGTTAAAACAAAAGAT+AGG + Chr7:87370433-87370452 MsG0780041161.01.T01:CDS 20.0%
!! AATACAAGATTTACTGAAAA+AGG + Chr7:87371766-87371785 MsG0780041161.01.T01:intron 20.0%
!! AGAAGTTAAAACAAAAGATA+GGG + Chr7:87370434-87370453 MsG0780041161.01.T01:CDS 20.0%
!! ATTTAATAAGGAAGTCTAAA+AGG + Chr7:87373404-87373423 MsG0780041161.01.T01:CDS 20.0%
!! ATTTATCCATCTATAAAACA+AGG - Chr7:87371619-87371638 None:intergenic 20.0%
!! CAAAATCTAAAAACTTGAAA+TGG - Chr7:87373510-87373529 None:intergenic 20.0%
!! TAAAAAGAGTAACTTTACAT+TGG - Chr7:87371555-87371574 None:intergenic 20.0%
!! TAAATTATCAAAGAGTTAAG+AGG - Chr7:87371924-87371943 None:intergenic 20.0%
!! TTGTTTATTATTGTAGAGAA+TGG + Chr7:87370818-87370837 MsG0780041161.01.T01:intron 20.0%
!! TTTATCCATCTATAAAACAA+GGG - Chr7:87371618-87371637 None:intergenic 20.0%
!!! AATGTAAAGTTACTCTTTTT+AGG + Chr7:87371554-87371573 MsG0780041161.01.T01:intron 20.0%
!!! CTTCATGTAGAATTTTTTAT+TGG + Chr7:87371101-87371120 MsG0780041161.01.T01:intron 20.0%
!!! TTTTGTACTATTGCATAATT+TGG + Chr7:87370743-87370762 MsG0780041161.01.T01:intron 20.0%
! AACAAAATCAACTACAACAA+TGG + Chr7:87370062-87370081 MsG0780041161.01.T01:CDS 25.0%
! ACAAATACAATGAATAGCAA+GGG - Chr7:87371693-87371712 None:intergenic 25.0%
! ACATGTGTTATAAGTATAAC+CGG + Chr7:87373610-87373629 MsG0780041161.01.T01:three_prime_UTR 25.0%
! ACTTACATATGTAACTTAGT+AGG + Chr7:87371042-87371061 MsG0780041161.01.T01:intron 25.0%
! AGATGGATAAATAGAATAGA+TGG + Chr7:87371627-87371646 MsG0780041161.01.T01:intron 25.0%
! CAATTAATTCACAACACAAT+AGG - Chr7:87370617-87370636 None:intergenic 25.0%
! GCATTCTATAGAGTTAAATA+TGG + Chr7:87372898-87372917 MsG0780041161.01.T01:CDS 25.0%
! TAAAATTATAAACCGCATGT+GGG + Chr7:87372109-87372128 MsG0780041161.01.T01:CDS 25.0%
! TAAATCAGTGAAAGGATTAA+AGG + Chr7:87373204-87373223 MsG0780041161.01.T01:CDS 25.0%
! TACAAATACAATGAATAGCA+AGG - Chr7:87371694-87371713 None:intergenic 25.0%
! TACTATTGCATAATTTGGTT+TGG + Chr7:87370748-87370767 MsG0780041161.01.T01:intron 25.0%
! TATTTAACTCTATAGAATGC+AGG - Chr7:87372898-87372917 None:intergenic 25.0%
! TTAAAATTATAAACCGCATG+TGG + Chr7:87372108-87372127 MsG0780041161.01.T01:CDS 25.0%
! TTCTTTATCTTCAGTATGAT+GGG - Chr7:87372819-87372838 None:intergenic 25.0%
!! GATTTTGTCTATTTGTTCAT+GGG + Chr7:87371011-87371030 MsG0780041161.01.T01:intron 25.0%
!! TGATTTTGTCTATTTGTTCA+TGG + Chr7:87371010-87371029 MsG0780041161.01.T01:intron 25.0%
!! TTTTAGTAATGCTAGTGTTA+TGG + Chr7:87370938-87370957 MsG0780041161.01.T01:CDS 25.0%
!!! AGAAAAACACAATTTTGACT+CGG + Chr7:87371246-87371265 MsG0780041161.01.T01:intron 25.0%
!!! TATATTTATTTCTGTCGTTG+TGG + Chr7:87370590-87370609 MsG0780041161.01.T01:intron 25.0%
!!! TGCACATCATATGTTATTTT+TGG - Chr7:87371953-87371972 None:intergenic 25.0%
AAAACCCATGTAAAAATCAG+CGG + Chr7:87371341-87371360 MsG0780041161.01.T01:intron 30.0%
AAAATTATAAACCGCATGTG+GGG + Chr7:87372110-87372129 MsG0780041161.01.T01:CDS 30.0%
AAATGAAACAATCGTTGAGT+TGG + Chr7:87371367-87371386 MsG0780041161.01.T01:intron 30.0%
AACAAAAATGAAACCTCTGA+TGG - Chr7:87370528-87370547 None:intergenic 30.0%
AAGACCATACTTACTCATAT+TGG - Chr7:87373574-87373593 None:intergenic 30.0%
AATCCGAGATAGATAAACAA+AGG + Chr7:87372531-87372550 MsG0780041161.01.T01:CDS 30.0%
ACTGAAGATAAAGAAGATGA+TGG + Chr7:87372824-87372843 MsG0780041161.01.T01:CDS 30.0%
AGCAAACAAGTAAGAGAAAA+GGG + Chr7:87372728-87372747 MsG0780041161.01.T01:CDS 30.0%
CAAAGCTATAAATCAGTGAA+AGG + Chr7:87373196-87373215 MsG0780041161.01.T01:CDS 30.0%
CTTCTTTATCTTCAGTATGA+TGG - Chr7:87372820-87372839 None:intergenic 30.0%
GATACGAATAGAGAACAAAT+TGG - Chr7:87371802-87371821 None:intergenic 30.0%
GCAACAACAAAAACTATAAG+TGG + Chr7:87372924-87372943 MsG0780041161.01.T01:CDS 30.0%
GCATTACTAAAAGAATCCAA+AGG - Chr7:87370930-87370949 None:intergenic 30.0%
GTGAGGCTCATAATTTAATA+AGG + Chr7:87373392-87373411 MsG0780041161.01.T01:CDS 30.0%
TACAAGAAAATATCCAATCG+AGG + Chr7:87372973-87372992 MsG0780041161.01.T01:CDS 30.0%
TATCAAATCTGCTTTCAGAA+GGG - Chr7:87372955-87372974 None:intergenic 30.0%
TGATGATTCCTGGTAAAATA+CGG + Chr7:87370088-87370107 MsG0780041161.01.T01:CDS 30.0%
TTAAAGGATCAAATACTAGC+TGG + Chr7:87373220-87373239 MsG0780041161.01.T01:CDS 30.0%
TTGACCAATATGAGTAAGTA+TGG + Chr7:87373567-87373586 MsG0780041161.01.T01:three_prime_UTR 30.0%
! AAATGGAGAAAAGCTTCTTT+TGG - Chr7:87373493-87373512 None:intergenic 30.0%
! AGGAACTTGATTTTCTCATT+GGG + Chr7:87371062-87371081 MsG0780041161.01.T01:intron 30.0%
! CTCATGTTGATATTTTGCTT+CGG - Chr7:87372654-87372673 None:intergenic 30.0%
! TAGGAACTTGATTTTCTCAT+TGG + Chr7:87371061-87371080 MsG0780041161.01.T01:intron 30.0%
! TCTCCTTTGTTTATCTATCT+CGG - Chr7:87372537-87372556 None:intergenic 30.0%
! TGCTTGTAACTTGTAAATGA+AGG - Chr7:87370704-87370723 None:intergenic 30.0%
!! CACTTTAGGTCATTGTTTTA+TGG + Chr7:87371421-87371440 MsG0780041161.01.T01:intron 30.0%
AAAAATGAAACCTCTGATGG+AGG - Chr7:87370525-87370544 None:intergenic 35.0%
AAAGCTTGAACAAGAAGCTT+GGG + Chr7:87372384-87372403 MsG0780041161.01.T01:CDS 35.0%
AATGGGCAAAAATCAAGGTT+AGG + Chr7:87373358-87373377 MsG0780041161.01.T01:CDS 35.0%
ACTTCATTGCATCAAATAGG+TGG + Chr7:87371187-87371206 MsG0780041161.01.T01:intron 35.0%
ACTTTGTCTGTCTTTGTGTT+AGG - Chr7:87370001-87370020 None:intergenic 35.0%
AGGAAGAAATAAAAGGTAGG+AGG + Chr7:87372993-87373012 MsG0780041161.01.T01:CDS 35.0%
AGTATGCAGAGCTGATATAA+GGG - Chr7:87372165-87372184 None:intergenic 35.0%
ATAAGGGACATACTAGAAGA+AGG - Chr7:87372149-87372168 None:intergenic 35.0%
ATGGGCAAAAATCAAGGTTA+GGG + Chr7:87373359-87373378 MsG0780041161.01.T01:CDS 35.0%
CAAGCTCAAGGAAAAAGTTA+CGG + Chr7:87373160-87373179 MsG0780041161.01.T01:CDS 35.0%
CAGCAAACAAGTAAGAGAAA+AGG + Chr7:87372727-87372746 MsG0780041161.01.T01:CDS 35.0%
CCAATCGAGGAAGAAATAAA+AGG + Chr7:87372986-87373005 MsG0780041161.01.T01:CDS 35.0%
CGAAGCAAAATATCAACATG+AGG + Chr7:87372652-87372671 MsG0780041161.01.T01:CDS 35.0%
CGCTATTCTTGTAGGTAAAA+GGG + Chr7:87370179-87370198 MsG0780041161.01.T01:CDS 35.0%
CTCACTTCATTGCATCAAAT+AGG + Chr7:87371184-87371203 MsG0780041161.01.T01:intron 35.0%
CTCTCTTGGAAGCTATTTAT+GGG - Chr7:87373319-87373338 None:intergenic 35.0%
GCTATTCTTGTAGGTAAAAG+GGG + Chr7:87370180-87370199 MsG0780041161.01.T01:CDS 35.0%
GGAAGAAAAAAAAAACTCGC+CGG - Chr7:87373632-87373651 None:intergenic 35.0%
GGTTGTGAAAATTGTCTAGT+TGG - Chr7:87373280-87373299 None:intergenic 35.0%
GTAGTTGTGGTTAATTACTG+AGG - Chr7:87370148-87370167 None:intergenic 35.0%
GTATCAAATCTGCTTTCAGA+AGG - Chr7:87372956-87372975 None:intergenic 35.0%
GTCTATTTGTTCATGGGAAT+AGG + Chr7:87371017-87371036 MsG0780041161.01.T01:intron 35.0%
GTTCTCTATTCGTATCAGAA+TGG + Chr7:87371806-87371825 MsG0780041161.01.T01:intron 35.0%
TAAGGGACATACTAGAAGAA+GGG - Chr7:87372148-87372167 None:intergenic 35.0%
TAGTAATGCTAGTGTTATGG+AGG + Chr7:87370941-87370960 MsG0780041161.01.T01:CDS 35.0%
TATATCAGATGGAGTGGAAT+GGG + Chr7:87373063-87373082 MsG0780041161.01.T01:CDS 35.0%
TCGAGGAAGAAATAAAAGGT+AGG + Chr7:87372990-87373009 MsG0780041161.01.T01:CDS 35.0%
TCTCTCTTGGAAGCTATTTA+TGG - Chr7:87373320-87373339 None:intergenic 35.0%
TGATGCAATGAAGTGAGAAA+TGG - Chr7:87371181-87371200 None:intergenic 35.0%
TTACTGACATCTTTCAAACG+TGG - Chr7:87372062-87372081 None:intergenic 35.0%
TTCTTTCACCACCTTAAGAA+GGG - Chr7:87372435-87372454 None:intergenic 35.0%
! AATCAGCTTGAAGCTTTTCT+AGG + Chr7:87372704-87372723 MsG0780041161.01.T01:CDS 35.0%
! CTAGACAATTTTCACAACCT+TGG + Chr7:87373281-87373300 MsG0780041161.01.T01:CDS 35.0%
! GGAACTTGATTTTCTCATTG+GGG + Chr7:87371063-87371082 MsG0780041161.01.T01:intron 35.0%
! TTTCCAAGAAGCCTTTTCTT+CGG - Chr7:87372279-87372298 None:intergenic 35.0%
!! AGATAAAGAAGATGATGGAG+AGG + Chr7:87372829-87372848 MsG0780041161.01.T01:CDS 35.0%
!! CCTTTTATTTCTTCCTCGAT+TGG - Chr7:87372989-87373008 None:intergenic 35.0%
!! TTGTGTCTGCTTTGAAAATG+TGG + Chr7:87370986-87371005 MsG0780041161.01.T01:intron 35.0%
!!! CATGACCCTTGTTTTATAGA+TGG + Chr7:87371610-87371629 MsG0780041161.01.T01:intron 35.0%
!!! TCTTCCGCTGATTTTTACAT+GGG - Chr7:87371348-87371367 None:intergenic 35.0%
!!! TTCTTCCGCTGATTTTTACA+TGG - Chr7:87371349-87371368 None:intergenic 35.0%
AAAGGCTTCTTGGAAAACCA+AGG + Chr7:87372283-87372302 MsG0780041161.01.T01:CDS 40.0%
AAATCTGCTTTCAGAAGGGT+AGG - Chr7:87372951-87372970 None:intergenic 40.0%
AAGAATCCAAAGGACCAACA+TGG - Chr7:87370920-87370939 None:intergenic 40.0%
AAGATAGGGTTTCAACTGCT+AGG + Chr7:87370448-87370467 MsG0780041161.01.T01:CDS 40.0%
ACAATGGACATGATGATTCC+TGG + Chr7:87370078-87370097 MsG0780041161.01.T01:CDS 40.0%
ACAGAACAACATCACCATGT+TGG + Chr7:87370903-87370922 MsG0780041161.01.T01:CDS 40.0%
AGGGAAATGGGCAAAAATCA+AGG + Chr7:87373353-87373372 MsG0780041161.01.T01:CDS 40.0%
ATATCAGATGGAGTGGAATG+GGG + Chr7:87373064-87373083 MsG0780041161.01.T01:CDS 40.0%
ATGCTACAATGCAGGGAAAT+GGG + Chr7:87373341-87373360 MsG0780041161.01.T01:CDS 40.0%
ATTCTTGTAGGTAAAAGGGG+AGG + Chr7:87370183-87370202 MsG0780041161.01.T01:CDS 40.0%
ATTTCCTTAACACTAGGCGA+AGG - Chr7:87370390-87370409 None:intergenic 40.0%
CAATGACCTAAAGTGAACAC+AGG - Chr7:87371416-87371435 None:intergenic 40.0%
CAGTATGCAGAGCTGATATA+AGG - Chr7:87372166-87372185 None:intergenic 40.0%
CATGTCTTATAGTAGCGTCT+TGG + Chr7:87371971-87371990 MsG0780041161.01.T01:intron 40.0%
CGCATCTACTAGAATTTCGA+TGG + Chr7:87371715-87371734 MsG0780041161.01.T01:intron 40.0%
CTATTTATGGGATCTCGTGA+AGG - Chr7:87373307-87373326 None:intergenic 40.0%
GAAAGCTTGAACAAGAAGCT+TGG + Chr7:87372383-87372402 MsG0780041161.01.T01:CDS 40.0%
GATGAGTTAGCAAGAGATGT+TGG + Chr7:87372500-87372519 MsG0780041161.01.T01:CDS 40.0%
GCGCTATTCTTGTAGGTAAA+AGG + Chr7:87370178-87370197 MsG0780041161.01.T01:CDS 40.0%
GGATAAGCTGATTAACCTGT+AGG - Chr7:87372205-87372224 None:intergenic 40.0%
GTATATCAGATGGAGTGGAA+TGG + Chr7:87373062-87373081 MsG0780041161.01.T01:CDS 40.0%
GTTCTTTCACCACCTTAAGA+AGG - Chr7:87372436-87372455 None:intergenic 40.0%
GTTTGACCTGTGTTCACTTT+AGG + Chr7:87371407-87371426 MsG0780041161.01.T01:intron 40.0%
TAACAGTTTCCACGTAGGTA+CGG - Chr7:87370223-87370242 None:intergenic 40.0%
TCACGAGGTAGAGAAAGAAA+AGG + Chr7:87372574-87372593 MsG0780041161.01.T01:CDS 40.0%
TCACGCATTTCCTTAACACT+AGG - Chr7:87370396-87370415 None:intergenic 40.0%
TCTTTAACATGTGCCCTTGA+GGG - Chr7:87371463-87371482 None:intergenic 40.0%
TGGGCAAAAATCAAGGTTAG+GGG + Chr7:87373360-87373379 MsG0780041161.01.T01:CDS 40.0%
TGTGAAGGATCAGACAAATG+AGG - Chr7:87370498-87370517 None:intergenic 40.0%
TTCAAACGCGCTATTCTTGT+AGG + Chr7:87370171-87370190 MsG0780041161.01.T01:CDS 40.0%
TTCCTTAACATGTGCCCTTA+GGG + Chr7:87371577-87371596 MsG0780041161.01.T01:intron 40.0%
TTCTTTAACATGTGCCCTTG+AGG - Chr7:87371464-87371483 None:intergenic 40.0%
TTGTAGAGAATGGATCGATC+TGG + Chr7:87370828-87370847 MsG0780041161.01.T01:intron 40.0%
! AGAATGGATCGATCTGGAAT+TGG + Chr7:87370834-87370853 MsG0780041161.01.T01:CDS 40.0%
! ATCAAATACTAGCTGGTTCC+AGG + Chr7:87373227-87373246 MsG0780041161.01.T01:CDS 40.0%
! CTATTCCATCTCCTGAGTTT+TGG - Chr7:87373111-87373130 None:intergenic 40.0%
! CTGGGAAAGCTTTTATGAAC+TGG + Chr7:87373132-87373151 MsG0780041161.01.T01:CDS 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + Chr7:87371446-87371465 MsG0780041161.01.T01:intron 40.0%
!! ATGTTAACTTGTGCCCTCAA+GGG + Chr7:87371447-87371466 MsG0780041161.01.T01:intron 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG - Chr7:87371594-87371613 None:intergenic 40.0%
!! GAAGTGTTTTGCCGAAGAAA+AGG + Chr7:87372265-87372284 MsG0780041161.01.T01:CDS 40.0%
!! TCATGTTAACTTGTGCCCTA+AGG - Chr7:87371595-87371614 None:intergenic 40.0%
!!! CTTTTGGTTTCTCCTAGCAA+GGG - Chr7:87373477-87373496 None:intergenic 40.0%
!!! TCTTTTGGTTTCTCCTAGCA+AGG - Chr7:87373478-87373497 None:intergenic 40.0%
!!! TTTTGGTTTCTCCTAGCAAG+GGG - Chr7:87373476-87373495 None:intergenic 40.0%
AAAGGTAGGAGGTCTATCTC+TGG + Chr7:87373004-87373023 MsG0780041161.01.T01:CDS 45.0%
AACAGTTTCCACGTAGGTAC+GGG - Chr7:87370222-87370241 None:intergenic 45.0%
AAGCTCCAAAACTCAGGAGA+TGG + Chr7:87373103-87373122 MsG0780041161.01.T01:CDS 45.0%
ACATCACCATGTTGGTCCTT+TGG + Chr7:87370911-87370930 MsG0780041161.01.T01:CDS 45.0%
ACTCAGGAGATGGAATAGAC+TGG + Chr7:87373113-87373132 MsG0780041161.01.T01:CDS 45.0%
ACTGCTAGGTCTATTCGTTC+TGG + Chr7:87370462-87370481 MsG0780041161.01.T01:CDS 45.0%
AGAGAGACATGCTACAATGC+AGG + Chr7:87373333-87373352 MsG0780041161.01.T01:CDS 45.0%
ATGCTGCTGTTGATATGCTC+AGG + Chr7:87372681-87372700 MsG0780041161.01.T01:CDS 45.0%
CAAACGTGGTTTAACTCCCA+CGG - Chr7:87372048-87372067 None:intergenic 45.0%
CAAGGAGCGAGAAATTGTTG+AGG + Chr7:87372301-87372320 MsG0780041161.01.T01:CDS 45.0%
CAGGAGAACTTGATGTAGAG+CGG + Chr7:87372342-87372361 MsG0780041161.01.T01:CDS 45.0%
CATGCTACAATGCAGGGAAA+TGG + Chr7:87373340-87373359 MsG0780041161.01.T01:CDS 45.0%
CCTGGTAAAATACGGAAACG+AGG + Chr7:87370096-87370115 MsG0780041161.01.T01:CDS 45.0%
CGCGTTTGAATCTGTAGTTG+TGG - Chr7:87370161-87370180 None:intergenic 45.0%
CTCAACAATTTCTCGCTCCT+TGG - Chr7:87372303-87372322 None:intergenic 45.0%
CTCAGGAGATGGAATAGACT+GGG + Chr7:87373114-87373133 MsG0780041161.01.T01:CDS 45.0%
GAACTGGAGAAACAAGCTCA+AGG + Chr7:87373148-87373167 MsG0780041161.01.T01:CDS 45.0%
GAAGGATCAGACAAATGAGG+AGG - Chr7:87370495-87370514 None:intergenic 45.0%
GAGAGACATGCTACAATGCA+GGG + Chr7:87373334-87373353 MsG0780041161.01.T01:CDS 45.0%
GAGCTTAACAGTTTCCACGT+AGG - Chr7:87370228-87370247 None:intergenic 45.0%
GAGTAAATCGAAGCAAGCTC+CGG + Chr7:87370317-87370336 MsG0780041161.01.T01:CDS 45.0%
GATGAGAAGCTCCAAAACTC+AGG + Chr7:87373097-87373116 MsG0780041161.01.T01:CDS 45.0%
GATTCCTTCGCCTAGTGTTA+AGG + Chr7:87370383-87370402 MsG0780041161.01.T01:CDS 45.0%
GCATTGTAGCATGTCTCTCT+TGG - Chr7:87373333-87373352 None:intergenic 45.0%
GCTGCAATTGAATCTGTTGC+AGG + Chr7:87372323-87372342 MsG0780041161.01.T01:CDS 45.0%
GGGCATATCAACAATGACCA+TGG - Chr7:87371673-87371692 None:intergenic 45.0%
GGGTATTTGCTTGGCAAACA+AGG - Chr7:87373456-87373475 None:intergenic 45.0%
GTCAACAAAAGCTTGTCACG+AGG + Chr7:87372559-87372578 MsG0780041161.01.T01:CDS 45.0%
GTTAACCGATATGTTACGCG+AGG + Chr7:87372607-87372626 MsG0780041161.01.T01:CDS 45.0%
GTTCCTTAACATGTGCCCTT+AGG + Chr7:87371576-87371595 MsG0780041161.01.T01:intron 45.0%
TAAATTATGAGCCTCACCCC+TGG - Chr7:87373389-87373408 None:intergenic 45.0%
TATCAGATGGAGTGGAATGG+GGG + Chr7:87373065-87373084 MsG0780041161.01.T01:CDS 45.0%
TCAACAATGACCATGGCAGT+TGG - Chr7:87371666-87371685 None:intergenic 45.0%
TCTCTCCTCGCGTAACATAT+CGG - Chr7:87372615-87372634 None:intergenic 45.0%
TCTGATCTGAACGTTGTTCG+TGG - Chr7:87372226-87372245 None:intergenic 45.0%
TCTGATGGAGGACTATGTGA+AGG - Chr7:87370513-87370532 None:intergenic 45.0%
TTCACATAGTCCTCCATCAG+AGG + Chr7:87370512-87370531 MsG0780041161.01.T01:CDS 45.0%
TTCCAGACTGACACATGATC+TGG - Chr7:87370676-87370695 None:intergenic 45.0%
TTGATGTAGAGCGGAAGCTA+AGG + Chr7:87372351-87372370 MsG0780041161.01.T01:CDS 45.0%
TTGCCGAAGAAAAGGCTTCT+TGG + Chr7:87372273-87372292 MsG0780041161.01.T01:CDS 45.0%
! AGAATGCAGGTCACTTTCAC+CGG - Chr7:87372885-87372904 None:intergenic 45.0%
! CAATGGTGTAGAGTGTCAAG+AGG + Chr7:87372856-87372875 MsG0780041161.01.T01:CDS 45.0%
! CCTCGTTTCCGTATTTTACC+AGG - Chr7:87370099-87370118 None:intergenic 45.0%
! CTATCTCTGGAAGAGCTTCA+AGG + Chr7:87373017-87373036 MsG0780041161.01.T01:CDS 45.0%
! CTGCAGAGGAGTATATCAGA+TGG + Chr7:87373052-87373071 MsG0780041161.01.T01:CDS 45.0%
! GAGGAGTATATCAGATGGAG+TGG + Chr7:87373057-87373076 MsG0780041161.01.T01:CDS 45.0%
! GTAGAGTGTCAAGAGGAATC+CGG + Chr7:87372863-87372882 MsG0780041161.01.T01:CDS 45.0%
! TGACTCGGCAAGAACATGAA+AGG + Chr7:87371261-87371280 MsG0780041161.01.T01:intron 45.0%
! TTTGGAGCTTCTCATCACCT+TGG - Chr7:87373093-87373112 None:intergenic 45.0%
!! GAAAGCATCCCTTCTTAAGG+TGG + Chr7:87372424-87372443 MsG0780041161.01.T01:CDS 45.0%
!! GACGAAAGCATCCCTTCTTA+AGG + Chr7:87372421-87372440 MsG0780041161.01.T01:CDS 45.0%
!! GATGATGGAGAGGTTGACAA+TGG + Chr7:87372839-87372858 MsG0780041161.01.T01:CDS 45.0%
!! TGTTTTGTTGCCAACTGCCA+TGG + Chr7:87371653-87371672 MsG0780041161.01.T01:intron 45.0%
!! TTATTTAATATAATAAAATG+AGG + Chr7:87370638-87370657 MsG0780041161.01.T01:intron 5.0%
AATCAAGGTTAGGGGAAGCC+AGG + Chr7:87373368-87373387 MsG0780041161.01.T01:CDS 50.0%
ACCTTTCGAAGATCCAAGCC+TGG - Chr7:87373248-87373267 None:intergenic 50.0%
ATCAAGGTTAGGGGAAGCCA+GGG + Chr7:87373369-87373388 MsG0780041161.01.T01:CDS 50.0%
ATCAGCTCTGCATACTGAGC+TGG + Chr7:87372169-87372188 MsG0780041161.01.T01:CDS 50.0%
ATCGAAGCAAGCTCCGGTAT+CGG + Chr7:87370323-87370342 MsG0780041161.01.T01:CDS 50.0%
CAAGAAGCTTGGGAGAGAAC+TGG + Chr7:87372394-87372413 MsG0780041161.01.T01:CDS 50.0%
CCAAGCAAATACCCCTTGCT+AGG + Chr7:87373462-87373481 MsG0780041161.01.T01:three_prime_UTR 50.0%
CTCGACCTGTGTGAATTGCT+CGG - Chr7:87370879-87370898 None:intergenic 50.0%
CTTGTAGGTAAAAGGGGAGG+CGG + Chr7:87370186-87370205 MsG0780041161.01.T01:CDS 50.0%
GAACACCGAGCAATTCACAC+AGG + Chr7:87370871-87370890 MsG0780041161.01.T01:CDS 50.0%
GATTTACTCCCCGATTGCGA+CGG - Chr7:87370306-87370325 None:intergenic 50.0%
GGATAAGCACATCTCTGCAG+AGG + Chr7:87373038-87373057 MsG0780041161.01.T01:CDS 50.0%
GGGACATACTAGAAGAAGGG+CGG - Chr7:87372145-87372164 None:intergenic 50.0%
GTCCAGATCATGTGTCAGTC+TGG + Chr7:87370671-87370690 MsG0780041161.01.T01:intron 50.0%
GTTAGCAAGAGATGTTGGCG+AGG + Chr7:87372505-87372524 MsG0780041161.01.T01:CDS 50.0%
TAGAGCGGAAGCTAAGGAGA+CGG + Chr7:87372357-87372376 MsG0780041161.01.T01:CDS 50.0%
TCCAGGCTTGGATCTTCGAA+AGG + Chr7:87373244-87373263 MsG0780041161.01.T01:CDS 50.0%
TCTGCATACTGAGCTGGAGA+GGG + Chr7:87372175-87372194 MsG0780041161.01.T01:CDS 50.0%
TTCTTCGTCGTTCAAGTGCG+TGG - Chr7:87372762-87372781 None:intergenic 50.0%
! ATACTAGCTGGTTCCAGGCT+TGG + Chr7:87373232-87373251 MsG0780041161.01.T01:CDS 50.0%
! TGCCCTAAGGGCACATGTTA+AGG - Chr7:87371582-87371601 None:intergenic 50.0%
!! CCTAGCAAGGGGTATTTGCT+TGG - Chr7:87373465-87373484 None:intergenic 50.0%
ACCCCTGCTTCATCTACCGT+GGG + Chr7:87372029-87372048 MsG0780041161.01.T01:CDS 55.0%
ACTCCCACGGTAGATGAAGC+AGG - Chr7:87372035-87372054 None:intergenic 55.0%
ATGGGATCTCGTGAAGGCCA+AGG - Chr7:87373301-87373320 None:intergenic 55.0%
CGAGCAATTCACACAGGTCG+AGG + Chr7:87370877-87370896 MsG0780041161.01.T01:CDS 55.0%
CTCCCACGGTAGATGAAGCA+GGG - Chr7:87372034-87372053 None:intergenic 55.0%
CTCTGCATACTGAGCTGGAG+AGG + Chr7:87372174-87372193 MsG0780041161.01.T01:CDS 55.0%
GAAACTAGCGGCGACGCTTT+GGG + Chr7:87370350-87370369 MsG0780041161.01.T01:CDS 55.0%
GGTCTTCATGACCCCACATG+CGG - Chr7:87372124-87372143 None:intergenic 55.0%
TCAAGGTTAGGGGAAGCCAG+GGG + Chr7:87373370-87373389 MsG0780041161.01.T01:CDS 55.0%
TCCCACGGTAGATGAAGCAG+GGG - Chr7:87372033-87372052 None:intergenic 55.0%
! GCTAGTTTCCTCGCCGATAC+CGG - Chr7:87370339-87370358 None:intergenic 55.0%
!! GGTATCGGCGAGGAAACTAG+CGG + Chr7:87370338-87370357 MsG0780041161.01.T01:CDS 55.0%
AAGCTCGCGATCTCCAGCGT+CGG + Chr7:87370242-87370261 MsG0780041161.01.T01:CDS 60.0%
AGGGGTCTGTGCTCGAGATC+TGG - Chr7:87372015-87372034 None:intergenic 60.0%
CCACGTAGGTACGGGTGTAG+TGG - Chr7:87370214-87370233 None:intergenic 60.0%
CCACTACACCCGTACCTACG+TGG + Chr7:87370211-87370230 MsG0780041161.01.T01:CDS 60.0%
GACCCCTGCTTCATCTACCG+TGG + Chr7:87372028-87372047 MsG0780041161.01.T01:CDS 60.0%
GCGGAAGCTAAGGAGACGGT+TGG + Chr7:87372361-87372380 MsG0780041161.01.T01:CDS 60.0%
GGAAACTAGCGGCGACGCTT+TGG + Chr7:87370349-87370368 MsG0780041161.01.T01:CDS 60.0%
GGAGTGGAATGGGGGAACCA+AGG + Chr7:87373073-87373092 MsG0780041161.01.T01:CDS 60.0%
TTACTCCCCGATTGCGACGG+TGG - Chr7:87370303-87370322 None:intergenic 60.0%
! GACGGTGGCGGTGGATATCT+CGG - Chr7:87370288-87370307 None:intergenic 60.0%
AGTATCCGCATCGCCGACGC+TGG - Chr7:87370258-87370277 None:intergenic 65.0%
GTTAGGGGAAGCCAGGGGTG+AGG + Chr7:87373375-87373394 MsG0780041161.01.T01:CDS 65.0%
TCCACCGCCACCGTCGCAAT+CGG + Chr7:87370293-87370312 MsG0780041161.01.T01:CDS 65.0%
!! AGCAAGCTCCGGTATCGGCG+AGG + Chr7:87370328-87370347 MsG0780041161.01.T01:CDS 65.0%
!! GATCTCCAGCGTCGGCGATG+CGG + Chr7:87370250-87370269 MsG0780041161.01.T01:CDS 65.0%
CACCGCCACCGTCGCAATCG+GGG + Chr7:87370295-87370314 MsG0780041161.01.T01:CDS 70.0%
CCACCGCCACCGTCGCAATC+GGG + Chr7:87370294-87370313 MsG0780041161.01.T01:CDS 70.0%
CTCCCCGATTGCGACGGTGG+CGG - Chr7:87370300-87370319 None:intergenic 70.0%
GCTGGAGAGGGCTCGCCTAC+AGG + Chr7:87372187-87372206 MsG0780041161.01.T01:CDS 70.0%
! CCCGATTGCGACGGTGGCGG+TGG - Chr7:87370297-87370316 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 87370001 87373653 87370001 ID=MsG0780041161.01;Name=MsG0780041161.01
Chr7 mRNA 87370001 87373653 87370001 ID=MsG0780041161.01.T01;Parent=MsG0780041161.01;Name=MsG0780041161.01.T01;_AED=0.41;_eAED=0.41;_QI=41|1|1|1|1|1|3|224|681
Chr7 exon 87370001 87370533 87370001 ID=MsG0780041161.01.T01:exon:41314;Parent=MsG0780041161.01.T01
Chr7 exon 87370834 87370962 87370834 ID=MsG0780041161.01.T01:exon:41315;Parent=MsG0780041161.01.T01
Chr7 exon 87372005 87373653 87372005 ID=MsG0780041161.01.T01:exon:41316;Parent=MsG0780041161.01.T01
Chr7 five_prime_UTR 87370001 87370041 87370001 ID=MsG0780041161.01.T01:five_prime_utr;Parent=MsG0780041161.01.T01
Chr7 CDS 87370042 87370533 87370042 ID=MsG0780041161.01.T01:cds;Parent=MsG0780041161.01.T01
Chr7 CDS 87370834 87370962 87370834 ID=MsG0780041161.01.T01:cds;Parent=MsG0780041161.01.T01
Chr7 CDS 87372005 87373429 87372005 ID=MsG0780041161.01.T01:cds;Parent=MsG0780041161.01.T01
Chr7 three_prime_UTR 87373430 87373653 87373430 ID=MsG0780041161.01.T01:three_prime_utr;Parent=MsG0780041161.01.T01
Gene Sequence

>MsG0780041161.01.T01

ATGCTTAAACAAAACAGAACAACAAAATCAACTACAACAATGGACATGATGATTCCTGGTAAAATACGGAAACGAGGTTGTTCATCATCAGCATCATCTTCATCCTCAGTAATTAACCACAACTACAGATTCAAACGCGCTATTCTTGTAGGTAAAAGGGGAGGCGGATCCACTACACCCGTACCTACGTGGAAACTGTTAAGCTCGCGATCTCCAGCGTCGGCGATGCGGATACTTGAATCACCGAGATATCCACCGCCACCGTCGCAATCGGGGAGTAAATCGAAGCAAGCTCCGGTATCGGCGAGGAAACTAGCGGCGACGCTTTGGGAAATGAATGAGATTCCTTCGCCTAGTGTTAAGGAAATGCGTGATCACGTGAAAATGAAAAAAGAAGTTAAAACAAAAGATAGGGTTTCAACTGCTAGGTCTATTCGTTCTGGTTCTTTGCCTCCTCATTTGTCTGATCCTTCACATAGTCCTCCATCAGAGAGAATGGATCGATCTGGAATTGGTAATCGACATAGAAGAACACCGAGCAATTCACACAGGTCGAGGTTAACAGAACAACATCACCATGTTGGTCCTTTGGATTCTTTTAGTAATGCTAGTGTTATGGAGATTGAAACCAGATCTCGAGCACAGACCCCTGCTTCATCTACCGTGGGAGTTAAACCACGTTTGAAAGATGTCAGTAATGCATTGACAACATCAAAAGAGCTACTTAAAATTATAAACCGCATGTGGGGTCATGAAGACCGCCCTTCTTCTAGTATGTCCCTTATATCAGCTCTGCATACTGAGCTGGAGAGGGCTCGCCTACAGGTTAATCAGCTTATCCACGAACAACGTTCAGATCAGAATGAGATAAATTATTTGATGAAGTGTTTTGCCGAAGAAAAGGCTTCTTGGAAAACCAAGGAGCGAGAAATTGTTGAGGCTGCAATTGAATCTGTTGCAGGAGAACTTGATGTAGAGCGGAAGCTAAGGAGACGGTTGGAAAGCTTGAACAAGAAGCTTGGGAGAGAACTGGCTGAGACGAAAGCATCCCTTCTTAAGGTGGTGAAAGAACTTGAAACTGAAAAGAGAGAAAGAGAAATTATTGAAAAAGTATGTGATGAGTTAGCAAGAGATGTTGGCGAGGATAAATCCGAGATAGATAAACAAAGGAGAGTGTCAACAAAAGCTTGTCACGAGGTAGAGAAAGAAAAGGAAATGATGCAGTTAACCGATATGTTACGCGAGGAGAGAGCTCAAAAGAAACTCTCCGAAGCAAAATATCAACATGAGGAAAAGAATGCTGCTGTTGATATGCTCAGGAATCAGCTTGAAGCTTTTCTAGGCAGCAAACAAGTAAGAGAAAAGGGACGTAGTTCCACGCACTTGAACGACGAAGAAATTTCTGCATATCTGAGCAGAAGCAGATTAGTCTCCCATCATACTGAAGATAAAGAAGATGATGGAGAGGTTGACAATGGTGTAGAGTGTCAAGAGGAATCCGGTGAAAGTGACCTGCATTCTATAGAGTTAAATATGGACAGCAACAACAAAAACTATAAGTGGACCTACCCTTCTGAAAGCAGATTTGATACAAGAAAATATCCAATCGAGGAAGAAATAAAAGGTAGGAGGTCTATCTCTGGAAGAGCTTCAAGGATAAGCACATCTCTGCAGAGGAGTATATCAGATGGAGTGGAATGGGGGAACCAAGGTGATGAGAAGCTCCAAAACTCAGGAGATGGAATAGACTGGGAAAGCTTTTATGAACTGGAGAAACAAGCTCAAGGAAAAAGTTACGGCGATGAAGTACAACAAAGCTATAAATCAGTGAAAGGATTAAAGGATCAAATACTAGCTGGTTCCAGGCTTGGATCTTCGAAAGGTTATGCTAGTCCAACTAGACAATTTTCACAACCTTGGCCTTCACGAGATCCCATAAATAGCTTCCAAGAGAGACATGCTACAATGCAGGGAAATGGGCAAAAATCAAGGTTAGGGGAAGCCAGGGGTGAGGCTCATAATTTAATAAGGAAGTCTAAAAGGTGA

Protein sequence

>MsG0780041161.01.T01

MLKQNRTTKSTTTMDMMIPGKIRKRGCSSSASSSSSVINHNYRFKRAILVGKRGGGSTTPVPTWKLLSSRSPASAMRILESPRYPPPPSQSGSKSKQAPVSARKLAATLWEMNEIPSPSVKEMRDHVKMKKEVKTKDRVSTARSIRSGSLPPHLSDPSHSPPSERMDRSGIGNRHRRTPSNSHRSRLTEQHHHVGPLDSFSNASVMEIETRSRAQTPASSTVGVKPRLKDVSNALTTSKELLKIINRMWGHEDRPSSSMSLISALHTELERARLQVNQLIHEQRSDQNEINYLMKCFAEEKASWKTKEREIVEAAIESVAGELDVERKLRRRLESLNKKLGRELAETKASLLKVVKELETEKREREIIEKVCDELARDVGEDKSEIDKQRRVSTKACHEVEKEKEMMQLTDMLREERAQKKLSEAKYQHEEKNAAVDMLRNQLEAFLGSKQVREKGRSSTHLNDEEISAYLSRSRLVSHHTEDKEDDGEVDNGVECQEESGESDLHSIELNMDSNNKNYKWTYPSESRFDTRKYPIEEEIKGRRSISGRASRISTSLQRSISDGVEWGNQGDEKLQNSGDGIDWESFYELEKQAQGKSYGDEVQQSYKSVKGLKDQILAGSRLGSSKGYASPTRQFSQPWPSRDPINSFQERHATMQGNGQKSRLGEARGEAHNLIRKSKR*