Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015468.01.T01 | XP_003600894.1 | 96.627 | 593 | 20 | 0 | 1 | 593 | 1 | 593 | 0 | 1199 |
| MsG0380015468.01.T02 | XP_003600903.1 | 90.625 | 224 | 20 | 1 | 1 | 223 | 1 | 224 | 1.20E-139 | 414 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015468.01.T01 | Q8GV43 | 52.649 | 604 | 254 | 9 | 7 | 588 | 20 | 613 | 0 | 625 |
| MsG0380015468.01.T02 | Q944C2 | 51.415 | 212 | 91 | 3 | 15 | 221 | 17 | 221 | 1.13E-64 | 213 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015468.01.T01 | G7JB93 | 96.627 | 593 | 20 | 0 | 1 | 593 | 1 | 593 | 0.0 | 1199 |
| MsG0380015468.01.T02 | G7JBA2 | 90.625 | 224 | 20 | 1 | 1 | 223 | 1 | 224 | 5.73e-140 | 414 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000197.01 | MsG0380015468.01 | 0.807389 | 5.177213e-50 | 2.880019e-47 |
| MsG0180000264.01 | MsG0380015468.01 | 0.802121 | 6.520434e-49 | 3.168263e-46 |
| MsG0180000555.01 | MsG0380015468.01 | 0.819059 | 1.416715e-52 | 1.078828e-49 |
| MsG0180000585.01 | MsG0380015468.01 | 0.826516 | 2.598471e-54 | 2.442248e-51 |
| MsG0180000741.01 | MsG0380015468.01 | 0.814779 | 1.294964e-51 | 8.769140e-49 |
| MsG0180000822.01 | MsG0380015468.01 | 0.835154 | 1.979405e-56 | 2.399902e-53 |
| MsG0180001178.01 | MsG0380015468.01 | 0.815378 | 9.531253e-52 | 6.560508e-49 |
| MsG0180001565.01 | MsG0380015468.01 | 0.816144 | 6.433306e-52 | 4.522113e-49 |
| MsG0180002071.01 | MsG0380015468.01 | 0.803235 | 3.839831e-49 | 1.919542e-46 |
| MsG0180002894.01 | MsG0380015468.01 | 0.807106 | 5.944026e-50 | 3.282100e-47 |
| MsG0180002952.01 | MsG0380015468.01 | 0.820659 | 6.102868e-53 | 4.858183e-50 |
| MsG0180003444.01 | MsG0380015468.01 | 0.809533 | 1.805570e-50 | 1.062801e-47 |
| MsG0180003937.01 | MsG0380015468.01 | 0.800653 | 1.302720e-48 | 6.099143e-46 |
| MsG0180004060.01 | MsG0380015468.01 | 0.824103 | 9.677922e-54 | 8.490548e-51 |
| MsG0180004114.01 | MsG0380015468.01 | 0.814422 | 1.553483e-51 | 1.041951e-48 |
| MsG0180004147.01 | MsG0380015468.01 | 0.815962 | 7.066815e-52 | 4.942568e-49 |
| MsG0180004258.01 | MsG0380015468.01 | 0.810196 | 1.299675e-50 | 7.784327e-48 |
| MsG0180004357.01 | MsG0380015468.01 | 0.803372 | 3.597107e-49 | 1.804509e-46 |
| MsG0180004388.01 | MsG0380015468.01 | 0.823038 | 1.717618e-53 | 1.462416e-50 |
| MsG0180005559.01 | MsG0380015468.01 | 0.825503 | 4.524770e-54 | 4.131750e-51 |
| MsG0180005846.01 | MsG0380015468.01 | 0.812721 | 3.676050e-51 | 2.354845e-48 |
| MsG0180005944.01 | MsG0380015468.01 | 0.814389 | 1.579370e-51 | 1.058418e-48 |
| MsG0180006023.01 | MsG0380015468.01 | 0.812801 | 3.531778e-51 | 2.266923e-48 |
| MsG0180006235.01 | MsG0380015468.01 | 0.829941 | 3.884037e-55 | 4.033908e-52 |
| MsG0280006425.01 | MsG0380015468.01 | 0.822646 | 2.119739e-53 | 1.784856e-50 |
| MsG0280006432.01 | MsG0380015468.01 | 0.809641 | 1.711288e-50 | 1.010265e-47 |
| MsG0280006436.01 | MsG0380015468.01 | 0.835134 | 2.001986e-56 | 2.425749e-53 |
| MsG0280010614.01 | MsG0380015468.01 | 0.851660 | 7.680666e-61 | 1.565605e-57 |
| MsG0280010735.01 | MsG0380015468.01 | 0.809055 | 2.286022e-50 | 1.328515e-47 |
| MsG0280010868.01 | MsG0380015468.01 | 0.832659 | 8.333050e-56 | 9.375940e-53 |
| MsG0280011085.01 | MsG0380015468.01 | 0.825678 | 4.112099e-54 | 3.773825e-51 |
| MsG0280011105.01 | MsG0380015468.01 | 0.835262 | 1.858544e-56 | 2.260934e-53 |
| MsG0280011285.01 | MsG0380015468.01 | 0.807561 | 4.759928e-50 | 2.659591e-47 |
| MsG0280011293.01 | MsG0380015468.01 | 0.834371 | 3.115643e-56 | 3.690108e-53 |
| MsG0280011336.01 | MsG0380015468.01 | 0.837633 | 4.633911e-57 | 6.056107e-54 |
| MsG0280011348.01 | MsG0380015468.01 | 0.803903 | 2.790803e-49 | 1.419394e-46 |
| MsG0380011721.01 | MsG0380015468.01 | 0.805527 | 1.278520e-49 | 6.779449e-47 |
| MsG0380012021.01 | MsG0380015468.01 | 0.827146 | 1.837630e-54 | 1.758967e-51 |
| MsG0380012033.01 | MsG0380015468.01 | 0.843393 | 1.440159e-58 | 2.250344e-55 |
| MsG0380014118.01 | MsG0380015468.01 | 0.820478 | 6.715572e-53 | 5.319488e-50 |
| MsG0380014163.01 | MsG0380015468.01 | 0.809466 | 1.865976e-50 | 1.096385e-47 |
| MsG0380014573.01 | MsG0380015468.01 | 0.808271 | 3.362164e-50 | 1.914082e-47 |
| MsG0380014903.01 | MsG0380015468.01 | 0.842199 | 2.991725e-58 | 4.501805e-55 |
| MsG0380015468.01 | MsG0380015852.01 | 0.801716 | 7.896209e-49 | 3.797418e-46 |
| MsG0380015468.01 | MsG0380015878.01 | 0.808635 | 2.810951e-50 | 1.615444e-47 |
| MsG0380015468.01 | MsG0380015931.01 | 0.815600 | 8.509997e-52 | 5.893529e-49 |
| MsG0380015468.01 | MsG0380016227.01 | 0.816879 | 4.403833e-52 | 3.158493e-49 |
| MsG0380015468.01 | MsG0380016236.01 | 0.808108 | 3.641404e-50 | 2.064031e-47 |
| MsG0380015468.01 | MsG0380016483.01 | 0.801527 | 8.635385e-49 | 4.133178e-46 |
| MsG0380015468.01 | MsG0380016617.01 | 0.811919 | 5.501155e-51 | 3.448799e-48 |
| MsG0380015468.01 | MsG0380016859.01 | 0.808242 | 3.410352e-50 | 1.940013e-47 |
| MsG0380015468.01 | MsG0380016909.01 | 0.804453 | 2.144489e-49 | 1.106114e-46 |
| MsG0380015468.01 | MsG0380017195.01 | 0.836425 | 9.430646e-57 | 1.188025e-53 |
| MsG0380015468.01 | MsG0380017410.01 | 0.806797 | 6.908961e-50 | 3.784647e-47 |
| MsG0380015468.01 | MsG0380017604.01 | 0.807301 | 5.403649e-50 | 2.999154e-47 |
| MsG0380015468.01 | MsG0380017631.01 | 0.826272 | 2.971552e-54 | 2.773695e-51 |
| MsG0380015468.01 | MsG0380017946.01 | 0.817583 | 3.059083e-52 | 2.236598e-49 |
| MsG0380015468.01 | MsG0480018632.01 | 0.805684 | 1.185486e-49 | 6.311917e-47 |
| MsG0380015468.01 | MsG0480018637.01 | 0.804084 | 2.559759e-49 | 1.307890e-46 |
| MsG0380015468.01 | MsG0480018640.01 | 0.807625 | 4.612639e-50 | 2.581667e-47 |
| MsG0380015468.01 | MsG0480019034.01 | 0.857941 | 1.158096e-62 | 2.907138e-59 |
| MsG0380015468.01 | MsG0480019395.01 | 0.802732 | 4.878547e-49 | 2.407815e-46 |
| MsG0380015468.01 | MsG0480019502.01 | 0.802257 | 6.113080e-49 | 2.980734e-46 |
| MsG0380015468.01 | MsG0480019590.01 | 0.803869 | 2.836789e-49 | 1.441523e-46 |
| MsG0380015468.01 | MsG0480020242.01 | 0.808147 | 3.572348e-50 | 2.027084e-47 |
| MsG0380015468.01 | MsG0480021225.01 | 0.815907 | 7.268420e-52 | 5.075733e-49 |
| MsG0380015468.01 | MsG0480021900.01 | 0.815911 | 7.252918e-52 | 5.065449e-49 |
| MsG0380015468.01 | MsG0480022479.01 | 0.843446 | 1.394402e-58 | 2.182277e-55 |
| MsG0380015468.01 | MsG0480022480.01 | 0.836552 | 8.752373e-57 | 1.106726e-53 |
| MsG0380015468.01 | MsG0480022597.01 | 0.814392 | 1.577344e-51 | 1.057131e-48 |
| MsG0380015468.01 | MsG0480022598.01 | 0.816714 | 4.796027e-52 | 3.424156e-49 |
| MsG0380015468.01 | MsG0480022719.01 | 0.804105 | 2.533890e-49 | 1.295361e-46 |
| MsG0380015468.01 | MsG0480023245.01 | 0.821615 | 3.675544e-53 | 3.004979e-50 |
| MsG0380015468.01 | MsG0480023421.01 | 0.807011 | 6.223896e-50 | 3.428354e-47 |
| MsG0380015468.01 | MsG0480023460.01 | 0.807561 | 4.759928e-50 | 2.659591e-47 |
| MsG0380015468.01 | MsG0480023903.01 | 0.815208 | 1.040189e-51 | 7.125879e-49 |
| MsG0380015468.01 | MsG0580024035.01 | 0.823041 | 1.715087e-53 | 1.460388e-50 |
| MsG0380015468.01 | MsG0580024073.01 | 0.810923 | 9.054532e-51 | 5.529463e-48 |
| MsG0380015468.01 | MsG0580024157.01 | 0.840391 | 8.944334e-58 | 1.272266e-54 |
| MsG0380015468.01 | MsG0580024205.01 | 0.832128 | 1.127919e-55 | 1.249117e-52 |
| MsG0380015468.01 | MsG0580024393.01 | 0.803487 | 3.404704e-49 | 1.713140e-46 |
| MsG0380015468.01 | MsG0580024563.01 | 0.822510 | 2.279588e-53 | 1.911985e-50 |
| MsG0380015468.01 | MsG0580024682.01 | 0.856563 | 2.956705e-62 | 7.086821e-59 |
| MsG0380015468.01 | MsG0580024733.01 | 0.815136 | 1.079216e-51 | 7.378725e-49 |
| MsG0380015468.01 | MsG0580024826.01 | 0.810572 | 1.078539e-50 | 6.524359e-48 |
| MsG0380015468.01 | MsG0580025352.01 | 0.843015 | 1.817025e-58 | 2.804847e-55 |
| MsG0380015468.01 | MsG0580025807.01 | 0.805665 | 1.196454e-49 | 6.366897e-47 |
| MsG0380015468.01 | MsG0580026595.01 | 0.802510 | 5.421062e-49 | 2.660370e-46 |
| MsG0380015468.01 | MsG0580027208.01 | 0.802296 | 6.001477e-49 | 2.929333e-46 |
| MsG0380015468.01 | MsG0580027847.01 | 0.805202 | 1.495578e-49 | 7.864735e-47 |
| MsG0380015468.01 | MsG0580028307.01 | 0.835411 | 1.704486e-56 | 2.082693e-53 |
| MsG0380015468.01 | MsG0580029148.01 | 0.815443 | 9.221718e-52 | 6.358928e-49 |
| MsG0380015468.01 | MsG0580029149.01 | 0.812975 | 3.233985e-51 | 2.085503e-48 |
| MsG0380015468.01 | MsG0580029278.01 | 0.831833 | 1.333998e-55 | 1.464831e-52 |
| MsG0380015468.01 | MsG0580029672.01 | 0.840271 | 9.612754e-58 | 1.362148e-54 |
| MsG0380015468.01 | MsG0580029960.01 | 0.817381 | 3.397179e-52 | 2.470206e-49 |
| MsG0380015468.01 | MsG0680030436.01 | 0.815690 | 8.122845e-52 | 5.639319e-49 |
| MsG0380015468.01 | MsG0680030685.01 | 0.808781 | 2.615883e-50 | 1.509117e-47 |
| MsG0380015468.01 | MsG0680030740.01 | 0.801302 | 9.599505e-49 | 4.568767e-46 |
| MsG0380015468.01 | MsG0680034093.01 | 0.820013 | 8.582202e-53 | 6.711488e-50 |
| MsG0380015468.01 | MsG0680034757.01 | 0.807084 | 6.006448e-50 | 3.314797e-47 |
| MsG0380015468.01 | MsG0680035656.01 | 0.840453 | 8.617748e-58 | 1.228114e-54 |
| MsG0380015468.01 | MsG0680035681.01 | 0.819983 | 8.718904e-53 | 6.812663e-50 |
| MsG0380015468.01 | MsG0780037975.01 | 0.821002 | 5.089373e-53 | 4.091012e-50 |
| MsG0380015468.01 | MsG0780038829.01 | 0.803014 | 4.266652e-49 | 2.120761e-46 |
| MsG0380015468.01 | MsG0780039249.01 | 0.804815 | 1.802258e-49 | 9.383962e-47 |
| MsG0380015468.01 | MsG0780039389.01 | 0.807233 | 5.586162e-50 | 3.094878e-47 |
| MsG0380015468.01 | MsG0780039654.01 | 0.816399 | 5.643019e-52 | 3.994256e-49 |
| MsG0380015468.01 | MsG0780039655.01 | 0.812791 | 3.549784e-51 | 2.277923e-48 |
| MsG0380015468.01 | MsG0780039712.01 | 0.828140 | 1.060602e-54 | 1.045123e-51 |
| MsG0380015468.01 | MsG0780040488.01 | 0.851191 | 1.042391e-60 | 2.093137e-57 |
| MsG0380015468.01 | MsG0780040601.01 | 0.811663 | 6.253992e-51 | 3.894113e-48 |
| MsG0380015468.01 | MsG0780041310.01 | 0.801081 | 1.065546e-48 | 5.043220e-46 |
| MsG0380015468.01 | MsG0780041469.01 | 0.821083 | 4.876207e-53 | 3.928320e-50 |
| MsG0380015468.01 | MsG0780041787.01 | 0.817071 | 3.988355e-52 | 2.875522e-49 |
| MsG0380015468.01 | MsG0880042547.01 | 0.800526 | 1.383008e-48 | 6.453947e-46 |
| MsG0380015468.01 | MsG0880042967.01 | 0.802556 | 5.305215e-49 | 2.606461e-46 |
| MsG0380015468.01 | MsG0880043299.01 | 0.803258 | 3.798519e-49 | 1.900031e-46 |
| MsG0380015468.01 | MsG0880043522.01 | 0.802954 | 4.389979e-49 | 2.178832e-46 |
| MsG0380015468.01 | MsG0880043547.01 | 0.825988 | 3.471091e-54 | 3.213945e-51 |
| MsG0380015468.01 | MsG0880043921.01 | 0.865050 | 7.819185e-65 | 2.509701e-61 |
| MsG0380015468.01 | MsG0880044917.01 | 0.854378 | 1.281093e-61 | 2.855202e-58 |
| MsG0380015468.01 | MsG0880045099.01 | 0.800336 | 1.512145e-48 | 7.022786e-46 |
| MsG0380015468.01 | MsG0880045429.01 | 0.817888 | 2.610667e-52 | 1.924797e-49 |
| MsG0380015468.01 | MsG0880045786.01 | 0.812034 | 5.193447e-51 | 3.266025e-48 |
| MsG0380015468.01 | MsG0880045827.01 | 0.804843 | 1.778399e-49 | 9.266290e-47 |
| MsG0380015468.01 | MsG0880046669.01 | 0.813305 | 2.737789e-51 | 1.781414e-48 |
| MsG0380015468.01 | MsG0880046718.01 | 0.807057 | 6.088076e-50 | 3.357487e-47 |
| MsG0380015468.01 | MsG0880046762.01 | 0.818581 | 1.818931e-52 | 1.366897e-49 |
| MsG0380015468.01 | MsG0880047293.01 | 0.828356 | 9.409749e-55 | 9.330427e-52 |
| MsG0380015468.01 | MsG0880047497.01 | 0.802075 | 6.663281e-49 | 3.233955e-46 |
| MsG0280006586.01 | MsG0380015468.01 | 0.832534 | 8.950858e-56 | 1.003314e-52 |
| MsG0280006692.01 | MsG0380015468.01 | 0.814074 | 1.854404e-51 | 1.232075e-48 |
| MsG0280007035.01 | MsG0380015468.01 | 0.802225 | 6.205079e-49 | 3.023105e-46 |
| MsG0280007048.01 | MsG0380015468.01 | 0.835566 | 1.557334e-56 | 1.911617e-53 |
| MsG0280007089.01 | MsG0380015468.01 | 0.827066 | 1.920599e-54 | 1.834103e-51 |
| MsG0280007481.01 | MsG0380015468.01 | 0.806019 | 1.007910e-49 | 5.412673e-47 |
| MsG0280007609.01 | MsG0380015468.01 | 0.811892 | 5.578210e-51 | 3.494480e-48 |
| MsG0280007764.01 | MsG0380015468.01 | 0.813242 | 2.826391e-51 | 1.835800e-48 |
| MsG0280008270.01 | MsG0380015468.01 | 0.835301 | 1.816786e-56 | 2.212880e-53 |
| MsG0280008590.01 | MsG0380015468.01 | 0.805256 | 1.457206e-49 | 7.673129e-47 |
| MsG0280009514.01 | MsG0380015468.01 | 0.834856 | 2.352498e-56 | 2.826925e-53 |
| MsG0280010170.01 | MsG0380015468.01 | 0.808517 | 2.979737e-50 | 1.707259e-47 |
| MsG0280010173.01 | MsG0380015468.01 | 0.800962 | 1.126665e-48 | 5.316582e-46 |
| MsG0280010459.01 | MsG0380015468.01 | 0.811339 | 7.354555e-51 | 4.540441e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015468.01.T01 | MTR_3g070560 | 96.627 | 593 | 20 | 0 | 1 | 593 | 1 | 593 | 0.0 | 1199 |
| MsG0380015468.01.T01 | MTR_3g070710 | 85.354 | 594 | 84 | 2 | 1 | 593 | 1 | 592 | 0.0 | 1040 |
| MsG0380015468.01.T01 | MTR_3g070560 | 97.375 | 419 | 11 | 0 | 175 | 593 | 2 | 420 | 0.0 | 863 |
| MsG0380015468.01.T01 | MTR_5g082590 | 60.490 | 572 | 211 | 7 | 23 | 587 | 18 | 581 | 0.0 | 701 |
| MsG0380015468.01.T01 | MTR_5g082580 | 58.833 | 600 | 225 | 10 | 7 | 588 | 12 | 607 | 0.0 | 678 |
| MsG0380015468.01.T01 | MTR_5g071010 | 53.391 | 575 | 250 | 8 | 24 | 585 | 22 | 591 | 0.0 | 610 |
| MsG0380015468.01.T01 | MTR_5g082620 | 51.174 | 596 | 270 | 9 | 1 | 585 | 1 | 586 | 0.0 | 590 |
| MsG0380015468.01.T01 | MTR_3g070720 | 50.084 | 595 | 280 | 8 | 2 | 587 | 6 | 592 | 0.0 | 565 |
| MsG0380015468.01.T01 | MTR_3g069280 | 51.024 | 586 | 261 | 8 | 12 | 587 | 2 | 571 | 0.0 | 563 |
| MsG0380015468.01.T01 | MTR_5g071040 | 45.748 | 588 | 280 | 13 | 3 | 585 | 17 | 570 | 7.52e-170 | 495 |
| MsG0380015468.01.T01 | MTR_3g070720 | 48.703 | 501 | 241 | 7 | 2 | 494 | 6 | 498 | 3.35e-159 | 465 |
| MsG0380015468.01.T01 | MTR_3g070720 | 46.998 | 483 | 240 | 7 | 2 | 476 | 6 | 480 | 5.64e-143 | 423 |
| MsG0380015468.01.T01 | MTR_3g070720 | 45.107 | 419 | 214 | 7 | 2 | 412 | 6 | 416 | 1.55e-113 | 345 |
| MsG0380015468.01.T01 | MTR_3g070730 | 70.175 | 57 | 17 | 0 | 491 | 547 | 4 | 60 | 3.12e-20 | 88.6 |
| MsG0380015468.01.T02 | MTR_3g070710 | 90.625 | 224 | 20 | 1 | 1 | 223 | 1 | 224 | 1.45e-143 | 414 |
| MsG0380015468.01.T02 | MTR_3g070560 | 94.144 | 222 | 13 | 0 | 1 | 222 | 1 | 222 | 3.04e-138 | 400 |
| MsG0380015468.01.T02 | MTR_5g082580 | 57.466 | 221 | 88 | 2 | 7 | 222 | 12 | 231 | 4.73e-82 | 256 |
| MsG0380015468.01.T02 | MTR_5g082590 | 58.333 | 204 | 80 | 2 | 23 | 222 | 18 | 220 | 1.95e-80 | 252 |
| MsG0380015468.01.T02 | MTR_5g071010 | 51.500 | 200 | 93 | 3 | 24 | 221 | 22 | 219 | 8.18e-63 | 206 |
| MsG0380015468.01.T02 | MTR_5g082620 | 45.045 | 222 | 113 | 4 | 1 | 221 | 1 | 214 | 1.74e-57 | 192 |
| MsG0380015468.01.T02 | MTR_3g070720 | 44.068 | 236 | 116 | 5 | 2 | 228 | 6 | 234 | 4.40e-56 | 184 |
| MsG0380015468.01.T02 | MTR_3g070720 | 44.068 | 236 | 116 | 5 | 2 | 228 | 6 | 234 | 3.50e-55 | 184 |
| MsG0380015468.01.T02 | MTR_3g070720 | 44.068 | 236 | 116 | 5 | 2 | 228 | 6 | 234 | 4.72e-55 | 184 |
| MsG0380015468.01.T02 | MTR_3g070720 | 44.068 | 236 | 116 | 5 | 2 | 228 | 6 | 234 | 2.71e-54 | 183 |
| MsG0380015468.01.T02 | MTR_3g069280 | 46.018 | 226 | 97 | 5 | 12 | 228 | 2 | 211 | 4.64e-54 | 182 |
| MsG0380015468.01.T02 | MTR_5g071040 | 44.595 | 222 | 111 | 6 | 3 | 221 | 17 | 229 | 1.58e-53 | 181 |
| MsG0380015468.01.T02 | MTR_3g070560 | 91.667 | 48 | 4 | 0 | 175 | 222 | 2 | 49 | 1.21e-22 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015468.01.T01 | AT2G40116 | 52.649 | 604 | 254 | 9 | 7 | 588 | 20 | 613 | 0.0 | 625 |
| MsG0380015468.01.T01 | AT3G08510 | 51.190 | 588 | 270 | 10 | 1 | 583 | 1 | 576 | 0.0 | 578 |
| MsG0380015468.01.T01 | AT3G08510 | 51.190 | 588 | 270 | 10 | 1 | 583 | 1 | 576 | 0.0 | 578 |
| MsG0380015468.01.T01 | AT5G58690 | 50.775 | 581 | 262 | 6 | 13 | 587 | 15 | 577 | 0.0 | 577 |
| MsG0380015468.01.T01 | AT5G58690 | 50.775 | 581 | 262 | 6 | 13 | 587 | 15 | 577 | 0.0 | 577 |
| MsG0380015468.01.T01 | AT5G58690 | 51.042 | 576 | 258 | 6 | 18 | 587 | 1 | 558 | 0.0 | 577 |
| MsG0380015468.01.T01 | AT5G58700 | 49.576 | 589 | 286 | 5 | 7 | 587 | 11 | 596 | 0.0 | 571 |
| MsG0380015468.01.T01 | AT5G58700 | 49.576 | 589 | 286 | 5 | 7 | 587 | 11 | 596 | 0.0 | 571 |
| MsG0380015468.01.T01 | AT3G55940 | 49.664 | 596 | 270 | 11 | 1 | 583 | 1 | 579 | 0.0 | 567 |
| MsG0380015468.01.T01 | AT5G58700 | 54.004 | 487 | 214 | 4 | 109 | 587 | 4 | 488 | 0.0 | 525 |
| MsG0380015468.01.T01 | AT3G08510 | 47.959 | 588 | 260 | 11 | 1 | 583 | 1 | 547 | 5.57e-180 | 520 |
| MsG0380015468.01.T01 | AT3G08510 | 47.959 | 588 | 260 | 11 | 1 | 583 | 1 | 547 | 5.57e-180 | 520 |
| MsG0380015468.01.T01 | AT5G58670 | 47.966 | 590 | 271 | 10 | 3 | 588 | 2 | 559 | 1.33e-178 | 517 |
| MsG0380015468.01.T01 | AT4G38530 | 46.644 | 581 | 271 | 12 | 13 | 588 | 12 | 558 | 2.35e-175 | 509 |
| MsG0380015468.01.T01 | AT3G47290 | 40.837 | 502 | 240 | 9 | 87 | 585 | 81 | 528 | 1.14e-112 | 347 |
| MsG0380015468.01.T01 | AT3G47290 | 40.695 | 489 | 233 | 9 | 87 | 572 | 81 | 515 | 8.20e-109 | 338 |
| MsG0380015468.01.T01 | AT3G47220 | 40.562 | 498 | 232 | 15 | 94 | 585 | 89 | 528 | 5.14e-101 | 317 |
| MsG0380015468.01.T02 | AT5G58690 | 51.415 | 212 | 91 | 3 | 15 | 221 | 17 | 221 | 1.15e-65 | 213 |
| MsG0380015468.01.T02 | AT5G58690 | 51.415 | 212 | 91 | 3 | 15 | 221 | 17 | 221 | 1.15e-65 | 213 |
| MsG0380015468.01.T02 | AT5G58690 | 51.675 | 209 | 89 | 3 | 18 | 221 | 1 | 202 | 2.48e-65 | 212 |
| MsG0380015468.01.T02 | AT2G40116 | 44.538 | 238 | 110 | 5 | 7 | 226 | 20 | 253 | 5.07e-61 | 202 |
| MsG0380015468.01.T02 | AT3G08510 | 47.534 | 223 | 104 | 6 | 1 | 221 | 1 | 212 | 5.68e-60 | 197 |
| MsG0380015468.01.T02 | AT3G08510 | 47.534 | 223 | 104 | 6 | 1 | 221 | 1 | 212 | 5.68e-60 | 197 |
| MsG0380015468.01.T02 | AT3G08510 | 47.534 | 223 | 104 | 6 | 1 | 221 | 1 | 212 | 1.02e-59 | 197 |
| MsG0380015468.01.T02 | AT3G08510 | 47.534 | 223 | 104 | 6 | 1 | 221 | 1 | 212 | 1.02e-59 | 197 |
| MsG0380015468.01.T02 | AT3G55940 | 46.186 | 236 | 108 | 7 | 1 | 230 | 1 | 223 | 5.68e-59 | 196 |
| MsG0380015468.01.T02 | AT5G58700 | 46.818 | 220 | 104 | 3 | 7 | 221 | 11 | 222 | 5.81e-59 | 196 |
| MsG0380015468.01.T02 | AT5G58700 | 46.818 | 220 | 104 | 3 | 7 | 221 | 11 | 222 | 5.81e-59 | 196 |
| MsG0380015468.01.T02 | AT4G38530 | 48.077 | 208 | 97 | 6 | 17 | 221 | 16 | 215 | 1.85e-51 | 175 |
| MsG0380015468.01.T02 | AT5G58670 | 44.344 | 221 | 113 | 5 | 3 | 221 | 2 | 214 | 4.23e-50 | 172 |
| MsG0380015468.01.T02 | AT5G58700 | 62.832 | 113 | 40 | 1 | 109 | 221 | 4 | 114 | 9.81e-43 | 151 |
| MsG0380015468.01.T02 | AT3G47290 | 48.649 | 148 | 68 | 4 | 89 | 234 | 83 | 224 | 6.19e-36 | 133 |
| MsG0380015468.01.T02 | AT3G47290 | 48.000 | 150 | 70 | 4 | 87 | 234 | 81 | 224 | 1.04e-35 | 133 |
| MsG0380015468.01.T02 | AT3G47220 | 48.855 | 131 | 62 | 5 | 94 | 221 | 89 | 217 | 1.67e-27 | 110 |
Find 93 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGACACATTCATTTATTT+TGG | 0.148652 | 3:+70605451 | MsG0380015468.01.T01:three_prime_UTR |
| TGGACAATTGGTATCCTATT+TGG | 0.164917 | 3:+70605156 | MsG0380015468.01.T01:CDS |
| CAGATGGCAATTCAAATATT+TGG | 0.191692 | 3:+70603574 | MsG0380015468.01.T01:intron |
| CTGCTTGTGAAATAGTATTA+TGG | 0.229590 | 3:+70605550 | MsG0380015468.01.T01:three_prime_UTR |
| CTCCTTTAGGATAAATTCTT+AGG | 0.242663 | 3:-70604224 | None:intergenic |
| GTGAATCCGATTCCCATATT+TGG | 0.253107 | 3:-70605418 | None:intergenic |
| GATTGAACACGTTCTCCTTT+AGG | 0.264859 | 3:-70604237 | None:intergenic |
| AGACGTCGTTCATCCAAATA+TGG | 0.269481 | 3:+70605405 | MsG0380015468.01.T01:exon |
| TGTATTCGCGCGCACCTTGC+TGG | 0.275364 | 3:-70603947 | None:intergenic |
| ATTTCTTGAATTAGAAATTC+AGG | 0.279667 | 3:-70604778 | None:intergenic |
| ATCCGGAGCAACGCGAGTTC+TGG | 0.295971 | 3:-70605209 | None:intergenic |
| TGGTTTGCTATTAATCTTGA+TGG | 0.313457 | 3:-70605602 | None:intergenic |
| CTCATGGAGCCGACCTAATT+AGG | 0.322220 | 3:+70604093 | MsG0380015468.01.T01:CDS |
| AAACATTTGGTTAGTGCAAC+TGG | 0.337432 | 3:-70603172 | None:intergenic |
| AGTTTGATAGGTACCTAATT+AGG | 0.337781 | 3:-70604106 | None:intergenic |
| TCGAACTCTTCGTCCCAAAT+AGG | 0.347640 | 3:-70605170 | None:intergenic |
| GCAAAGTTATCTTGAAGTTT+TGG | 0.356660 | 3:-70603268 | None:intergenic |
| GGACAATTGGTATCCTATTT+GGG | 0.357053 | 3:+70605157 | MsG0380015468.01.T01:CDS |
| GCGTGACAGGTTTGTATTGC+TGG | 0.359926 | 3:+70605092 | MsG0380015468.01.T01:intron |
| TGTCATGTATCAGTGCTTAT+AGG | 0.373716 | 3:-70603326 | None:intergenic |
| CAGAGCTAAGACATGGATTT+CGG | 0.377392 | 3:+70605294 | MsG0380015468.01.T01:CDS |
| AGTTGCACTAACCAAATGTT+TGG | 0.392870 | 3:+70603174 | MsG0380015468.01.T01:CDS |
| TGCTTGTGAAATAGTATTAT+GGG | 0.404945 | 3:+70605551 | MsG0380015468.01.T01:three_prime_UTR |
| CCATGTCTTAGCTCTGATAT+AGG | 0.405158 | 3:-70605287 | None:intergenic |
| ACAATATATTTAAAGTTTCA+AGG | 0.413897 | 3:-70605382 | None:intergenic |
| TCAGTTTGAGGATACTCCTT+TGG | 0.416502 | 3:-70603688 | None:intergenic |
| ACAGGAACAACAAGATTCTA+TGG | 0.416912 | 3:+70603768 | MsG0380015468.01.T01:CDS |
| TAAATGTGGCCTAAAATTTG+TGG | 0.417479 | 3:-70604259 | None:intergenic |
| CTAACCTTTGTGTAAAAGTC+TGG | 0.421746 | 3:-70605007 | None:intergenic |
| AGCAAGGTGCGCGCGAATAC+AGG | 0.427772 | 3:+70603949 | MsG0380015468.01.T01:CDS |
| TGAACATCCCTTGCATCAAC+CGG | 0.429950 | 3:-70604723 | None:intergenic |
| TTCCAGAACTCGCGTTGCTC+CGG | 0.431005 | 3:+70605207 | MsG0380015468.01.T01:CDS |
| TCAAGAAATTGTACATAATG+AGG | 0.432156 | 3:+70604792 | MsG0380015468.01.T01:CDS |
| CGAGTTCTGGAACAGTCAAT+TGG | 0.437931 | 3:-70605196 | None:intergenic |
| TTGTTCGCACAATCAGTTTG+AGG | 0.438496 | 3:-70603700 | None:intergenic |
| CGAAGTGAAAGATAAAGATA+AGG | 0.444805 | 3:+70605232 | MsG0380015468.01.T01:CDS |
| CAAGTGTAAAGATGGACAAT+TGG | 0.450323 | 3:+70605144 | MsG0380015468.01.T01:CDS |
| GTTTGAGGATACTCCTTTGG+TGG | 0.456501 | 3:-70603685 | None:intergenic |
| CTTTATCTTTCACTTCGATC+CGG | 0.459942 | 3:-70605226 | None:intergenic |
| TCTTCTAAAGTTAGAATCAC+TGG | 0.460622 | 3:-70603235 | None:intergenic |
| TTGACGGCGGTAAAGTTAGA+AGG | 0.462814 | 3:+70604030 | MsG0380015468.01.T01:CDS |
| CCACATTTAGGGTGGATGTA+TGG | 0.468165 | 3:+70604273 | MsG0380015468.01.T01:CDS |
| ATCCTAAGAATTTATCCTAA+AGG | 0.472397 | 3:+70604222 | MsG0380015468.01.T01:CDS |
| GATGAAAACAAGTGTAAAGA+TGG | 0.472423 | 3:+70605136 | MsG0380015468.01.T01:CDS |
| GAAGTGAAAGATAAAGATAA+GGG | 0.476695 | 3:+70605233 | MsG0380015468.01.T01:CDS |
| GATGGTTGCATTCAATATGC+AGG | 0.480468 | 3:+70604302 | MsG0380015468.01.T01:CDS |
| GTTCTATGGCAGAAAGTAAA+CGG | 0.492152 | 3:+70603882 | MsG0380015468.01.T01:intron |
| AAATCTGCCTGTGAGTCTCA+TGG | 0.511522 | 3:+70604077 | MsG0380015468.01.T01:CDS |
| GTTCATCCAAATATGGGAAT+CGG | 0.518589 | 3:+70605412 | MsG0380015468.01.T01:three_prime_UTR |
| TGTTGCTTTGTGTGACAGAA+AGG | 0.520816 | 3:+70605319 | MsG0380015468.01.T01:CDS |
| GACGTCGTTCATCCAAATAT+GGG | 0.525484 | 3:+70605406 | MsG0380015468.01.T01:exon |
| AAGTATACAAAGGAGTTGGC+TGG | 0.527209 | 3:+70604942 | MsG0380015468.01.T01:CDS |
| CAGGTTTGTATTGCTGGAGT+GGG | 0.531989 | 3:+70605098 | MsG0380015468.01.T01:intron |
| AAGGATAGACTAAAAGTTGA+CGG | 0.536336 | 3:+70604014 | MsG0380015468.01.T01:CDS |
| AGGTATAATGTTAGTCATGA+AGG | 0.539347 | 3:+70605496 | MsG0380015468.01.T01:three_prime_UTR |
| CAAGGGATGTTCAAAGCGAA+TGG | 0.550048 | 3:+70604733 | MsG0380015468.01.T01:CDS |
| GAAAGTAAACGGTGAAGAGA+TGG | 0.550568 | 3:+70603893 | MsG0380015468.01.T01:intron |
| GTCGGCTCCATGAGACTCAC+AGG | 0.551139 | 3:-70604084 | None:intergenic |
| GAGAATCGGTCGAAGTGCGT+TGG | 0.553315 | 3:-70604980 | None:intergenic |
| AAAAGTCTGGTGGAGAGAAT+CGG | 0.553586 | 3:-70604994 | None:intergenic |
| AAATCACTCCGGTTGATGCA+AGG | 0.554660 | 3:+70604715 | MsG0380015468.01.T01:CDS |
| GCGAACAATCATGTGTCAAA+CGG | 0.556093 | 3:+70603715 | MsG0380015468.01.T01:CDS |
| CCTATATCAGAGCTAAGACA+TGG | 0.556857 | 3:+70605287 | MsG0380015468.01.T01:CDS |
| TGAAGATGAAACATGGGGAC+AGG | 0.561303 | 3:+70603750 | MsG0380015468.01.T01:CDS |
| AATCACTCCGGTTGATGCAA+GGG | 0.562532 | 3:+70604716 | MsG0380015468.01.T01:CDS |
| AAAATCAGAAGGTACTATGA+AGG | 0.562601 | 3:+70603995 | MsG0380015468.01.T01:CDS |
| AGGCATTTGATTACAATCCA+TGG | 0.565473 | 3:+70603969 | MsG0380015468.01.T01:CDS |
| GTCAAAGTATACAAAGGAGT+TGG | 0.566387 | 3:+70604938 | MsG0380015468.01.T01:CDS |
| GTCTTATGATAATTTGCTGA+AGG | 0.570195 | 3:+70605476 | MsG0380015468.01.T01:three_prime_UTR |
| ACCTTTGTGTAAAAGTCTGG+TGG | 0.590211 | 3:-70605004 | None:intergenic |
| GGATGTTCAAAGCGAATGGA+GGG | 0.590594 | 3:+70604737 | MsG0380015468.01.T01:CDS |
| TTCAAAGCGAATGGAGGGTG+CGG | 0.590959 | 3:+70604742 | MsG0380015468.01.T01:CDS |
| ACAGGTTTGTATTGCTGGAG+TGG | 0.597595 | 3:+70605097 | MsG0380015468.01.T01:intron |
| AGGGGCATGGCAAATCACTC+CGG | 0.598085 | 3:+70604704 | MsG0380015468.01.T01:intron |
| TATATCAACTAAACCACCAA+AGG | 0.600934 | 3:+70603672 | MsG0380015468.01.T01:CDS |
| AATCGTCTGAAGATGAAACA+TGG | 0.601806 | 3:+70603743 | MsG0380015468.01.T01:CDS |
| TTTGGTTAGTGCAACTGGAG+TGG | 0.604368 | 3:-70603167 | None:intergenic |
| GGGATGTTCAAAGCGAATGG+AGG | 0.604762 | 3:+70604736 | MsG0380015468.01.T01:CDS |
| GTGGATGTATGGAGCTCAGA+TGG | 0.609593 | 3:+70604284 | MsG0380015468.01.T01:CDS |
| TTAATCTTGATGGAGATGAA+AGG | 0.613040 | 3:-70605592 | None:intergenic |
| CCATACATCCACCCTAAATG+TGG | 0.621111 | 3:-70604273 | None:intergenic |
| ATCCATGGTGGAAAATCAGA+AGG | 0.621784 | 3:+70603984 | MsG0380015468.01.T01:CDS |
| ATCGTCTGAAGATGAAACAT+GGG | 0.625646 | 3:+70603744 | MsG0380015468.01.T01:CDS |
| TGATAGGTACCTAATTAGGT+CGG | 0.627187 | 3:-70604102 | None:intergenic |
| GTTGCTTTGTGTGACAGAAA+GGG | 0.634451 | 3:+70605320 | MsG0380015468.01.T01:CDS |
| AAACAGGTCAAAGTATACAA+AGG | 0.637507 | 3:+70604932 | MsG0380015468.01.T01:intron |
| TCTGTTATACAATCTGTCGT+AGG | 0.648459 | 3:-70603613 | None:intergenic |
| CATTTGATTACAATCCATGG+TGG | 0.660480 | 3:+70603972 | MsG0380015468.01.T01:CDS |
| TATACAAAGGAGTTGGCTGG+AGG | 0.672328 | 3:+70604945 | MsG0380015468.01.T01:CDS |
| TATTACAAATCAAACCAGCA+AGG | 0.677933 | 3:+70603933 | MsG0380015468.01.T01:CDS |
| ATATATTTAAAGTTTCAAGG+TGG | 0.680940 | 3:-70605379 | None:intergenic |
| TCGTCTGAAGATGAAACATG+GGG | 0.715707 | 3:+70603745 | MsG0380015468.01.T01:CDS |
| GATAGACTAAAAGTTGACGG+CGG | 0.769968 | 3:+70604017 | MsG0380015468.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTATTTTCTTAAATTATTAT+CGG | - | Chr3:70603371-70603390 | None:intergenic | 10.0% |
| !! | AAATTATTAAAATGATGAAG+AGG | + | Chr3:70602737-70602756 | MsG0380015468.01.T01:intron | 15.0% |
| !! | AATTGAATACATAAGAATTA+AGG | + | Chr3:70601866-70601885 | MsG0380015468.01.T01:intron | 15.0% |
| !! | ATTGAATACATAAGAATTAA+GGG | + | Chr3:70601867-70601886 | MsG0380015468.01.T01:intron | 15.0% |
| !! | TTATGAAAAAAAAATTACCT+TGG | - | Chr3:70602316-70602335 | None:intergenic | 15.0% |
| !!! | AAAATGAGATGATTTTTATT+CGG | + | Chr3:70602642-70602661 | MsG0380015468.01.T01:intron | 15.0% |
| !!! | AATATCACTATTGTTTTAAA+AGG | - | Chr3:70604562-70604581 | None:intergenic | 15.0% |
| !!! | ACAATATATTTAAAGTTTCA+AGG | - | Chr3:70605385-70605404 | None:intergenic | 15.0% |
| !!! | TATATATTTTTATGCTAATG+TGG | + | Chr3:70601597-70601616 | MsG0380015468.01.T01:intron | 15.0% |
| !!! | TATTTTTCATGTTAAAAAAC+AGG | + | Chr3:70604916-70604935 | MsG0380015468.01.T01:intron | 15.0% |
| !!! | TTAAACTTTGTTGTTATATT+AGG | + | Chr3:70604657-70604676 | MsG0380015468.01.T01:intron | 15.0% |
| !!! | TTTTTTTCATATTATTAGTC+AGG | - | Chr3:70602833-70602852 | None:intergenic | 15.0% |
| !! | AAATAAAAGAAACAAAGAAG+TGG | - | Chr3:70602067-70602086 | None:intergenic | 20.0% |
| !! | AAGTTTAAAAGAAATGTATG+CGG | - | Chr3:70604645-70604664 | None:intergenic | 20.0% |
| !! | AATTACGTTCATTAATTAGA+TGG | + | Chr3:70604425-70604444 | MsG0380015468.01.T01:intron | 20.0% |
| !! | AGATTTGGCAAATAAAAATA+TGG | - | Chr3:70601949-70601968 | None:intergenic | 20.0% |
| !! | ATTAAAGTAGTTCATTAAGT+TGG | + | Chr3:70603087-70603106 | MsG0380015468.01.T01:intron | 20.0% |
| !! | ATTTCTTGAATTAGAAATTC+AGG | - | Chr3:70604781-70604800 | None:intergenic | 20.0% |
| !! | GAATAAATTTACAAAATGTG+TGG | - | Chr3:70605055-70605074 | None:intergenic | 20.0% |
| !! | GATTTGGCAAATAAAAATAT+GGG | - | Chr3:70601948-70601967 | None:intergenic | 20.0% |
| !! | GCAAAAATTTCAAAATTGTT+AGG | + | Chr3:70602366-70602385 | MsG0380015468.01.T01:intron | 20.0% |
| !! | GGATTATTTAATCTAATCAA+AGG | - | Chr3:70602695-70602714 | None:intergenic | 20.0% |
| !! | GTTCCAAATAATAAAATGTT+TGG | - | Chr3:70602015-70602034 | None:intergenic | 20.0% |
| !! | TTACTTCTTGAAATTAATGT+AGG | + | Chr3:70603137-70603156 | MsG0380015468.01.T01:intron | 20.0% |
| !!! | AAAATGATTTTGGTTTTCAA+TGG | - | Chr3:70601092-70601111 | None:intergenic | 20.0% |
| !!! | AAACACTTTTTTTTTATGAC+AGG | + | Chr3:70604684-70604703 | MsG0380015468.01.T01:intron | 20.0% |
| !!! | AACACTTTTTTTTTATGACA+GGG | + | Chr3:70604685-70604704 | MsG0380015468.01.T01:intron | 20.0% |
| !!! | AATGAGTAAGAAAATGATTT+TGG | - | Chr3:70601102-70601121 | None:intergenic | 20.0% |
| !!! | ACTCATTAACTTATGTTTTA+AGG | - | Chr3:70601790-70601809 | None:intergenic | 20.0% |
| !!! | ATAAAACTCTTGGTTTATTT+TGG | - | Chr3:70602476-70602495 | None:intergenic | 20.0% |
| !!! | ATACACTTAGAATTTTCATT+GGG | - | Chr3:70602589-70602608 | None:intergenic | 20.0% |
| !!! | ATATATTTAAAGTTTCAAGG+TGG | - | Chr3:70605382-70605401 | None:intergenic | 20.0% |
| !!! | CTTTATTTCAATAAAACTCT+TGG | - | Chr3:70602486-70602505 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTCATTCTCAATT+TGG | - | Chr3:70601246-70601265 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTTTCTTTTCTAG+AGG | - | Chr3:70600946-70600965 | None:intergenic | 20.0% |
| !!! | TAGCCAAACATTTTATTATT+TGG | + | Chr3:70602009-70602028 | MsG0380015468.01.T01:intron | 20.0% |
| !!! | TTAAGTTTTTTGACCAAAAA+AGG | + | Chr3:70601278-70601297 | MsG0380015468.01.T01:CDS | 20.0% |
| !!! | TTAGTTGTTTCATTAGAATA+TGG | - | Chr3:70602716-70602735 | None:intergenic | 20.0% |
| ! | AAAAAATCATTTGAGCAATG+TGG | + | Chr3:70601716-70601735 | MsG0380015468.01.T01:intron | 25.0% |
| ! | AAAATTATGTATCTCATTGC+AGG | + | Chr3:70602849-70602868 | MsG0380015468.01.T01:intron | 25.0% |
| ! | AAATCATGGTTAATTAGGTT+TGG | - | Chr3:70604491-70604510 | None:intergenic | 25.0% |
| ! | AGATGGTTAATAACATGAAA+TGG | + | Chr3:70604442-70604461 | MsG0380015468.01.T01:intron | 25.0% |
| ! | ATACATGAAATAATGTGACA+AGG | - | Chr3:70602896-70602915 | None:intergenic | 25.0% |
| ! | ATCCTAAGAATTTATCCTAA+AGG | + | Chr3:70604222-70604241 | MsG0380015468.01.T01:CDS | 25.0% |
| ! | CAAAAAAGGTAAAGTGAATA+AGG | + | Chr3:70601292-70601311 | MsG0380015468.01.T01:CDS | 25.0% |
| ! | CATAACGTAATTCAAATACA+TGG | + | Chr3:70604400-70604419 | MsG0380015468.01.T01:intron | 25.0% |
| ! | CTTGAAAATCATGGTTAATT+AGG | - | Chr3:70604496-70604515 | None:intergenic | 25.0% |
| ! | GAAGTGAAAGATAAAGATAA+GGG | + | Chr3:70605233-70605252 | MsG0380015468.01.T01:CDS | 25.0% |
| ! | GAGTAATTGAACTTGATTTA+TGG | + | Chr3:70603004-70603023 | MsG0380015468.01.T01:CDS | 25.0% |
| ! | GATTGCTTTCTTATATCTTA+TGG | + | Chr3:70603112-70603131 | MsG0380015468.01.T01:intron | 25.0% |
| ! | TAACTTCATGTAAGTTTGAT+AGG | - | Chr3:70604121-70604140 | None:intergenic | 25.0% |
| ! | TACATGAAATAATGTGACAA+GGG | - | Chr3:70602895-70602914 | None:intergenic | 25.0% |
| ! | TCAAGAAATTGTACATAATG+AGG | + | Chr3:70604792-70604811 | MsG0380015468.01.T01:CDS | 25.0% |
| ! | TCACATTATTTCATGTATAC+AGG | + | Chr3:70602898-70602917 | MsG0380015468.01.T01:CDS | 25.0% |
| ! | TGCTTGTGAAATAGTATTAT+GGG | + | Chr3:70605551-70605570 | MsG0380015468.01.T01:three_prime_UTR | 25.0% |
| ! | TTTCATAACAAAAAACCAAG+AGG | + | Chr3:70602328-70602347 | MsG0380015468.01.T01:intron | 25.0% |
| !! | CATACACTTAGAATTTTCAT+TGG | - | Chr3:70602590-70602609 | None:intergenic | 25.0% |
| !! | CATTAGTACATTTTATATGC+AGG | + | Chr3:70600887-70600906 | MsG0380015468.01.T01:five_prime_UTR | 25.0% |
| !! | TACACTTAGAATTTTCATTG+GGG | - | Chr3:70602588-70602607 | None:intergenic | 25.0% |
| !! | TTCAAAACCTTTTCAATGAT+TGG | - | Chr3:70601452-70601471 | None:intergenic | 25.0% |
| !!! | ACACTTTTTTTTTATGACAG+GGG | + | Chr3:70604686-70604705 | MsG0380015468.01.T01:intron | 25.0% |
| !!! | ATTTTGGTAGATAAACGAAA+TGG | - | Chr3:70602460-70602479 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTATTCATGCAGA+TGG | + | Chr3:70603558-70603577 | MsG0380015468.01.T01:intron | 25.0% |
| !!! | CATTGAAAAGGTTTTGAAAA+TGG | + | Chr3:70601454-70601473 | MsG0380015468.01.T01:CDS | 25.0% |
| !!! | CTTATTCACTTTACCTTTTT+TGG | - | Chr3:70601294-70601313 | None:intergenic | 25.0% |
| !!! | GACAAAAGCATATTCTTTTA+TGG | - | Chr3:70603203-70603222 | None:intergenic | 25.0% |
| !!! | GTTTTAAAAGGTTCTCTAAT+AGG | - | Chr3:70604550-70604569 | None:intergenic | 25.0% |
| !!! | TGGAAATTGATTTGGAAAAT+TGG | - | Chr3:70602161-70602180 | None:intergenic | 25.0% |
| !!! | TTTTCTGAAAAGTGAAATGA+TGG | - | Chr3:70603840-70603859 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTTTCTAGAGGTT+AGG | - | Chr3:70600941-70600960 | None:intergenic | 25.0% |
| AAACAGGTCAAAGTATACAA+AGG | + | Chr3:70604932-70604951 | MsG0380015468.01.T01:intron | 30.0% | |
| AAAGCTTCCTTAAGATCTAA+AGG | - | Chr3:70601326-70601345 | None:intergenic | 30.0% | |
| AAATTGCACCTTATTGGATT+TGG | + | Chr3:70601424-70601443 | MsG0380015468.01.T01:CDS | 30.0% | |
| AAGGATAGACTAAAAGTTGA+CGG | + | Chr3:70604014-70604033 | MsG0380015468.01.T01:CDS | 30.0% | |
| ACATAGAACAACACTTTCAT+AGG | + | Chr3:70601060-70601079 | MsG0380015468.01.T01:five_prime_UTR | 30.0% | |
| ACCAGCATCACTAAAAAATA+TGG | + | Chr3:70603645-70603664 | MsG0380015468.01.T01:CDS | 30.0% | |
| ACTAGAAACTCAACATTCAT+TGG | + | Chr3:70601986-70602005 | MsG0380015468.01.T01:intron | 30.0% | |
| AGAACAAAATTGCACCTTAT+TGG | + | Chr3:70601418-70601437 | MsG0380015468.01.T01:CDS | 30.0% | |
| AGATCAACTACTTAGATTCA+TGG | + | Chr3:70601382-70601401 | MsG0380015468.01.T01:CDS | 30.0% | |
| AGGTATAATGTTAGTCATGA+AGG | + | Chr3:70605496-70605515 | MsG0380015468.01.T01:three_prime_UTR | 30.0% | |
| AGTTTGATAGGTACCTAATT+AGG | - | Chr3:70604109-70604128 | None:intergenic | 30.0% | |
| ATACCAATGCTTGAAAATCA+TGG | - | Chr3:70604505-70604524 | None:intergenic | 30.0% | |
| ATATACTAACTGTAAAGTGC+AGG | - | Chr3:70601742-70601761 | None:intergenic | 30.0% | |
| CAATGCTTATCTAACTAGAT+AGG | - | Chr3:70603498-70603517 | None:intergenic | 30.0% | |
| CAGATGGCAATTCAAATATT+TGG | + | Chr3:70603574-70603593 | MsG0380015468.01.T01:intron | 30.0% | |
| CAGTGATAAACCAATTATAG+AGG | + | Chr3:70602963-70602982 | MsG0380015468.01.T01:CDS | 30.0% | |
| CGAAGTGAAAGATAAAGATA+AGG | + | Chr3:70605232-70605251 | MsG0380015468.01.T01:CDS | 30.0% | |
| CTGCTTGTGAAATAGTATTA+TGG | + | Chr3:70605550-70605569 | MsG0380015468.01.T01:three_prime_UTR | 30.0% | |
| GATGAAAACAAGTGTAAAGA+TGG | + | Chr3:70605136-70605155 | MsG0380015468.01.T01:CDS | 30.0% | |
| GATTGGAAAAAAATGTAGTC+AGG | - | Chr3:70600917-70600936 | None:intergenic | 30.0% | |
| GCAATAGCAAAATAGTCATA+AGG | - | Chr3:70603526-70603545 | None:intergenic | 30.0% | |
| TAAACAGAAAAATGAGGACA+TGG | + | Chr3:70603792-70603811 | MsG0380015468.01.T01:CDS | 30.0% | |
| TAAATGTGGCCTAAAATTTG+TGG | - | Chr3:70604262-70604281 | None:intergenic | 30.0% | |
| TATATCAACTAAACCACCAA+AGG | + | Chr3:70603672-70603691 | MsG0380015468.01.T01:CDS | 30.0% | |
| TATATTTATGCATGAGATCG+AGG | - | Chr3:70601009-70601028 | None:intergenic | 30.0% | |
| TATGGCTAAACAGAAAAATG+AGG | + | Chr3:70603786-70603805 | MsG0380015468.01.T01:CDS | 30.0% | |
| TATTACAAATCAAACCAGCA+AGG | + | Chr3:70603933-70603952 | MsG0380015468.01.T01:CDS | 30.0% | |
| TATTTGCTCATTCAAAACAG+AGG | + | Chr3:70601186-70601205 | MsG0380015468.01.T01:five_prime_UTR | 30.0% | |
| TGTTTCAAAGCCTCTATAAT+TGG | - | Chr3:70602976-70602995 | None:intergenic | 30.0% | |
| TTAATCTTGATGGAGATGAA+AGG | - | Chr3:70605595-70605614 | None:intergenic | 30.0% | |
| TTATCTAACTAGATAGGAGA+TGG | - | Chr3:70603492-70603511 | None:intergenic | 30.0% | |
| TTGATATTATGAAAGAGCCA+AGG | + | Chr3:70602296-70602315 | MsG0380015468.01.T01:intron | 30.0% | |
| ! | AAATTGATTTCCAGTAAGGT+AGG | - | Chr3:70602932-70602951 | None:intergenic | 30.0% |
| ! | ACAAATTTTAGGCCACATTT+AGG | + | Chr3:70604261-70604280 | MsG0380015468.01.T01:CDS | 30.0% |
| ! | ACACTTAGAATTTTCATTGG+GGG | - | Chr3:70602587-70602606 | None:intergenic | 30.0% |
| ! | ACTTTTAATATCTGCTTCAC+TGG | - | Chr3:70604841-70604860 | None:intergenic | 30.0% |
| ! | AGGTTTTTGATCCTAAAAGA+AGG | + | Chr3:70604812-70604831 | MsG0380015468.01.T01:CDS | 30.0% |
| ! | CAAATTTTAGGCCACATTTA+GGG | + | Chr3:70604262-70604281 | MsG0380015468.01.T01:CDS | 30.0% |
| ! | CATGCATTGTTATGTTTTTC+AGG | + | Chr3:70604184-70604203 | MsG0380015468.01.T01:intron | 30.0% |
| ! | CGTGACACATTCATTTATTT+TGG | + | Chr3:70605451-70605470 | MsG0380015468.01.T01:three_prime_UTR | 30.0% |
| ! | GCAAAGTTATCTTGAAGTTT+TGG | - | Chr3:70603271-70603290 | None:intergenic | 30.0% |
| ! | GTGTTCAATCCACAAATTTT+AGG | + | Chr3:70604250-70604269 | MsG0380015468.01.T01:CDS | 30.0% |
| ! | GTTGCTTAACATGTACTTTT+AGG | + | Chr3:70601906-70601925 | MsG0380015468.01.T01:intron | 30.0% |
| ! | TAATTTCTCACACTCTTTTG+TGG | - | Chr3:70601168-70601187 | None:intergenic | 30.0% |
| ! | TGGTAAATTGATTTCCAGTA+AGG | - | Chr3:70602936-70602955 | None:intergenic | 30.0% |
| ! | TTTTATGGCTTCCAAACATT+TGG | - | Chr3:70603188-70603207 | None:intergenic | 30.0% |
| !! | AAAATCAGAAGGTACTATGA+AGG | + | Chr3:70603995-70604014 | MsG0380015468.01.T01:CDS | 30.0% |
| !! | ATTATAGAGGCTTTGAAACA+AGG | + | Chr3:70602976-70602995 | MsG0380015468.01.T01:CDS | 30.0% |
| !! | CTCCTTTAGGATAAATTCTT+AGG | - | Chr3:70604227-70604246 | None:intergenic | 30.0% |
| !! | GTCTTATGATAATTTGCTGA+AGG | + | Chr3:70605476-70605495 | MsG0380015468.01.T01:three_prime_UTR | 30.0% |
| !! | TAACCATGATTTTCAAGCAT+TGG | + | Chr3:70604499-70604518 | MsG0380015468.01.T01:intron | 30.0% |
| !! | TATGAAAGTGTTGTTCTATG+TGG | - | Chr3:70601061-70601080 | None:intergenic | 30.0% |
| !! | TCTTCTAAAGTTAGAATCAC+TGG | - | Chr3:70603238-70603257 | None:intergenic | 30.0% |
| !! | TGGTTTGCTATTAATCTTGA+TGG | - | Chr3:70605605-70605624 | None:intergenic | 30.0% |
| !!! | ACCATATTTTTTAGTGATGC+TGG | - | Chr3:70603649-70603668 | None:intergenic | 30.0% |
| !!! | TATCTTGAAGTTTTGGTGTT+AGG | - | Chr3:70603264-70603283 | None:intergenic | 30.0% |
| AAACATTTGGTTAGTGCAAC+TGG | - | Chr3:70603175-70603194 | None:intergenic | 35.0% | |
| AACCTGAATCATCAGTTCTA+TGG | + | Chr3:70603868-70603887 | MsG0380015468.01.T01:intron | 35.0% | |
| AAGTGCAACACAATCAGATT+TGG | - | Chr3:70601964-70601983 | None:intergenic | 35.0% | |
| AATAGAGACTAATCTCCGTA+TGG | - | Chr3:70602210-70602229 | None:intergenic | 35.0% | |
| AATCGTCTGAAGATGAAACA+TGG | + | Chr3:70603743-70603762 | MsG0380015468.01.T01:CDS | 35.0% | |
| AATGAAACAAGCAGTATTGC+AGG | + | Chr3:70601488-70601507 | MsG0380015468.01.T01:CDS | 35.0% | |
| ACAGGAACAACAAGATTCTA+TGG | + | Chr3:70603768-70603787 | MsG0380015468.01.T01:CDS | 35.0% | |
| AGAAAAATGAGGACATGGTA+AGG | + | Chr3:70603797-70603816 | MsG0380015468.01.T01:intron | 35.0% | |
| AGGAAAACAGAGAAAAACAG+AGG | + | Chr3:70601206-70601225 | MsG0380015468.01.T01:five_prime_UTR | 35.0% | |
| AGGCATTTGATTACAATCCA+TGG | + | Chr3:70603969-70603988 | MsG0380015468.01.T01:CDS | 35.0% | |
| AGTTGCACTAACCAAATGTT+TGG | + | Chr3:70603174-70603193 | MsG0380015468.01.T01:CDS | 35.0% | |
| ATCGTCTGAAGATGAAACAT+GGG | + | Chr3:70603744-70603763 | MsG0380015468.01.T01:CDS | 35.0% | |
| ATTGCAGGTACATCATGATA+TGG | + | Chr3:70602864-70602883 | MsG0380015468.01.T01:intron | 35.0% | |
| CAAAGTGTGAGATTTGTGAT+TGG | + | Chr3:70602116-70602135 | MsG0380015468.01.T01:intron | 35.0% | |
| CAAGTGTAAAGATGGACAAT+TGG | + | Chr3:70605144-70605163 | MsG0380015468.01.T01:CDS | 35.0% | |
| CAATCACAAATCTCACACTT+TGG | - | Chr3:70602118-70602137 | None:intergenic | 35.0% | |
| CATAAGAAACCATAATGTCG+TGG | + | Chr3:70604610-70604629 | MsG0380015468.01.T01:intron | 35.0% | |
| CATTTGATTACAATCCATGG+TGG | + | Chr3:70603972-70603991 | MsG0380015468.01.T01:CDS | 35.0% | |
| CTAACCTTTGTGTAAAAGTC+TGG | - | Chr3:70605010-70605029 | None:intergenic | 35.0% | |
| CTGCTTCTAGATGATTTCAA+TGG | + | Chr3:70601539-70601558 | MsG0380015468.01.T01:CDS | 35.0% | |
| CTTTATCTTTCACTTCGATC+CGG | - | Chr3:70605229-70605248 | None:intergenic | 35.0% | |
| GGACAATTGGTATCCTATTT+GGG | + | Chr3:70605157-70605176 | MsG0380015468.01.T01:CDS | 35.0% | |
| GGTGGTATTAAAGTAGTTCA+TGG | + | Chr3:70603045-70603064 | MsG0380015468.01.T01:CDS | 35.0% | |
| GTAAACTCATACACACGAAA+TGG | - | Chr3:70602427-70602446 | None:intergenic | 35.0% | |
| GTCAAAGTATACAAAGGAGT+TGG | + | Chr3:70604938-70604957 | MsG0380015468.01.T01:CDS | 35.0% | |
| GTTCATCCAAATATGGGAAT+CGG | + | Chr3:70605412-70605431 | MsG0380015468.01.T01:three_prime_UTR | 35.0% | |
| GTTCTATGGCAGAAAGTAAA+CGG | + | Chr3:70603882-70603901 | MsG0380015468.01.T01:intron | 35.0% | |
| TAAAAGGTTCTCTAATAGGC+TGG | - | Chr3:70604546-70604565 | None:intergenic | 35.0% | |
| TCATGGTTAATTAGGTTTGG+TGG | - | Chr3:70604488-70604507 | None:intergenic | 35.0% | |
| TCTGTTATACAATCTGTCGT+AGG | - | Chr3:70603616-70603635 | None:intergenic | 35.0% | |
| TGATAGGTACCTAATTAGGT+CGG | - | Chr3:70604105-70604124 | None:intergenic | 35.0% | |
| TGGACAATTGGTATCCTATT+TGG | + | Chr3:70605156-70605175 | MsG0380015468.01.T01:CDS | 35.0% | |
| TGTCATGTATCAGTGCTTAT+AGG | - | Chr3:70603329-70603348 | None:intergenic | 35.0% | |
| ! | AACTCTGTCAAGCTTTTACT+TGG | + | Chr3:70605353-70605372 | MsG0380015468.01.T01:CDS | 35.0% |
| ! | AGTGCATACCTCATCTTTTA+AGG | - | Chr3:70601567-70601586 | None:intergenic | 35.0% |
| ! | GCAGGTTAGAATTGTGTTTT+TGG | + | Chr3:70604320-70604339 | MsG0380015468.01.T01:intron | 35.0% |
| ! | GTGCATACCTCATCTTTTAA+GGG | - | Chr3:70601566-70601585 | None:intergenic | 35.0% |
| ! | TGCTGATTAAACCTACCATA+TGG | + | Chr3:70604156-70604175 | MsG0380015468.01.T01:intron | 35.0% |
| ! | TTTGGAGCCAATCATTGAAA+AGG | + | Chr3:70601442-70601461 | MsG0380015468.01.T01:CDS | 35.0% |
| !! | GATTAGTCTCTATTAAGTCG+CGG | + | Chr3:70602216-70602235 | MsG0380015468.01.T01:intron | 35.0% |
| !! | GCTTTTTCCAAGTTTGCAAA+TGG | + | Chr3:70601341-70601360 | MsG0380015468.01.T01:CDS | 35.0% |
| !! | TCAAGCATTGGTATATTGCA+TGG | + | Chr3:70604511-70604530 | MsG0380015468.01.T01:intron | 35.0% |
| !! | TTTTCTAGAGGTTAGGTGAT+TGG | - | Chr3:70600934-70600953 | None:intergenic | 35.0% |
| !!! | ATTTTTTAGTGATGCTGGTG+AGG | - | Chr3:70603644-70603663 | None:intergenic | 35.0% |
| !!! | TTTTTTAGTGATGCTGGTGA+GGG | - | Chr3:70603643-70603662 | None:intergenic | 35.0% |
| !!! | TTTTTTTTATGACAGGGGCA+TGG | + | Chr3:70604691-70604710 | MsG0380015468.01.T01:intron | 35.0% |
| AAAAGTCTGGTGGAGAGAAT+CGG | - | Chr3:70604997-70605016 | None:intergenic | 40.0% | |
| AACTCATACACACGAAATGG+AGG | - | Chr3:70602424-70602443 | None:intergenic | 40.0% | |
| AAGTATACAAAGGAGTTGGC+TGG | + | Chr3:70604942-70604961 | MsG0380015468.01.T01:CDS | 40.0% | |
| ACAATGCATGTCAAGCCATA+TGG | - | Chr3:70604174-70604193 | None:intergenic | 40.0% | |
| ACCTTTGTGTAAAAGTCTGG+TGG | - | Chr3:70605007-70605026 | None:intergenic | 40.0% | |
| AGAAATGTATGCGGTCGAAA+TGG | - | Chr3:70604636-70604655 | None:intergenic | 40.0% | |
| AGACGTCGTTCATCCAAATA+TGG | + | Chr3:70605405-70605424 | MsG0380015468.01.T01:exon | 40.0% | |
| AGAGCCACCTTTAGATCTTA+AGG | + | Chr3:70601316-70601335 | MsG0380015468.01.T01:CDS | 40.0% | |
| ATGAGGACATGGTAAGGAAT+AGG | + | Chr3:70603803-70603822 | MsG0380015468.01.T01:intron | 40.0% | |
| CAATGGTCCCTTAAAAGATG+AGG | + | Chr3:70601556-70601575 | MsG0380015468.01.T01:CDS | 40.0% | |
| CACAAATCTCACACTTTGGT+GGG | - | Chr3:70602114-70602133 | None:intergenic | 40.0% | |
| CAGAGCTAAGACATGGATTT+CGG | + | Chr3:70605294-70605313 | MsG0380015468.01.T01:CDS | 40.0% | |
| CAGTATTGCAGGATTCAGTT+TGG | + | Chr3:70601499-70601518 | MsG0380015468.01.T01:CDS | 40.0% | |
| CCACCATCTTTAGTTGAAGA+TGG | - | Chr3:70603030-70603049 | None:intergenic | 40.0% | |
| CCATCTTCAACTAAAGATGG+TGG | + | Chr3:70603027-70603046 | MsG0380015468.01.T01:CDS | 40.0% | |
| CCTATATCAGAGCTAAGACA+TGG | + | Chr3:70605287-70605306 | MsG0380015468.01.T01:CDS | 40.0% | |
| GAAAGTAAACGGTGAAGAGA+TGG | + | Chr3:70603893-70603912 | MsG0380015468.01.T01:intron | 40.0% | |
| GACGTCGTTCATCCAAATAT+GGG | + | Chr3:70605406-70605425 | MsG0380015468.01.T01:exon | 40.0% | |
| GATAGACTAAAAGTTGACGG+CGG | + | Chr3:70604017-70604036 | MsG0380015468.01.T01:CDS | 40.0% | |
| GATGGTTGCATTCAATATGC+AGG | + | Chr3:70604302-70604321 | MsG0380015468.01.T01:CDS | 40.0% | |
| GATTGAACACGTTCTCCTTT+AGG | - | Chr3:70604240-70604259 | None:intergenic | 40.0% | |
| GCGAACAATCATGTGTCAAA+CGG | + | Chr3:70603715-70603734 | MsG0380015468.01.T01:CDS | 40.0% | |
| GCTTCCTTAAGATCTAAAGG+TGG | - | Chr3:70601323-70601342 | None:intergenic | 40.0% | |
| GGGGTACATGGAAATTGATT+TGG | - | Chr3:70602169-70602188 | None:intergenic | 40.0% | |
| GTGAATCCGATTCCCATATT+TGG | - | Chr3:70605421-70605440 | None:intergenic | 40.0% | |
| GTTCTCACCATTTGCAAACT+TGG | - | Chr3:70601351-70601370 | None:intergenic | 40.0% | |
| TCACAAATCTCACACTTTGG+TGG | - | Chr3:70602115-70602134 | None:intergenic | 40.0% | |
| TCAGTTTGAGGATACTCCTT+TGG | - | Chr3:70603691-70603710 | None:intergenic | 40.0% | |
| TCGTCTGAAGATGAAACATG+GGG | + | Chr3:70603745-70603764 | MsG0380015468.01.T01:CDS | 40.0% | |
| TGCCATAGAACTGATGATTC+AGG | - | Chr3:70603873-70603892 | None:intergenic | 40.0% | |
| TGGCCATCTTCAACTAAAGA+TGG | + | Chr3:70603024-70603043 | MsG0380015468.01.T01:CDS | 40.0% | |
| TTCGGTACGTAAGTTCTCAA+TGG | + | Chr3:70602660-70602679 | MsG0380015468.01.T01:intron | 40.0% | |
| TTGTTCGCACAATCAGTTTG+AGG | - | Chr3:70603703-70603722 | None:intergenic | 40.0% | |
| ! | ATCCATGGTGGAAAATCAGA+AGG | + | Chr3:70603984-70604003 | MsG0380015468.01.T01:CDS | 40.0% |
| ! | ATTTTAGGCCACATTTAGGG+TGG | + | Chr3:70604265-70604284 | MsG0380015468.01.T01:CDS | 40.0% |
| ! | GATTGGCTCCAAATCCAATA+AGG | - | Chr3:70601435-70601454 | None:intergenic | 40.0% |
| ! | GTTGCTTTGTGTGACAGAAA+GGG | + | Chr3:70605320-70605339 | MsG0380015468.01.T01:CDS | 40.0% |
| ! | TACCTTCTGATTTTCCACCA+TGG | - | Chr3:70603989-70604008 | None:intergenic | 40.0% |
| ! | TCCACCAGACTTTTACACAA+AGG | + | Chr3:70605003-70605022 | MsG0380015468.01.T01:CDS | 40.0% |
| ! | TTCACTGGCAACCTTCTTTT+AGG | - | Chr3:70604826-70604845 | None:intergenic | 40.0% |
| !! | CCATGTCTTAGCTCTGATAT+AGG | - | Chr3:70605290-70605309 | None:intergenic | 40.0% |
| !! | GGTTAATTAGGTTTGGTGGA+TGG | - | Chr3:70604484-70604503 | None:intergenic | 40.0% |
| !! | TGTTGCTTTGTGTGACAGAA+AGG | + | Chr3:70605319-70605338 | MsG0380015468.01.T01:CDS | 40.0% |
| !!! | CTTGAAGTTTTGGTGTTAGG+TGG | - | Chr3:70603261-70603280 | None:intergenic | 40.0% |
| AAATCTGCCTGTGAGTCTCA+TGG | + | Chr3:70604077-70604096 | MsG0380015468.01.T01:CDS | 45.0% | |
| AATCTCCGTATGGAAACCGT+GGG | - | Chr3:70602200-70602219 | None:intergenic | 45.0% | |
| ACAGGTTTGTATTGCTGGAG+TGG | + | Chr3:70605097-70605116 | MsG0380015468.01.T01:intron | 45.0% | |
| CAAGAGGTTCTTAGCTCAAG+TGG | + | Chr3:70602344-70602363 | MsG0380015468.01.T01:intron | 45.0% | |
| CAAGGGATGTTCAAAGCGAA+TGG | + | Chr3:70604733-70604752 | MsG0380015468.01.T01:CDS | 45.0% | |
| CACTTGAGCTAAGAACCTCT+TGG | - | Chr3:70602346-70602365 | None:intergenic | 45.0% | |
| CAGGTTTGTATTGCTGGAGT+GGG | + | Chr3:70605098-70605117 | MsG0380015468.01.T01:intron | 45.0% | |
| CCATACATCCACCCTAAATG+TGG | - | Chr3:70604276-70604295 | None:intergenic | 45.0% | |
| GATCAATCTGATTGCGTGAC+AGG | + | Chr3:70605079-70605098 | MsG0380015468.01.T01:intron | 45.0% | |
| GGACACAATTCCTACCTTAC+TGG | + | Chr3:70602919-70602938 | MsG0380015468.01.T01:CDS | 45.0% | |
| GGATGTTCAAAGCGAATGGA+GGG | + | Chr3:70604737-70604756 | MsG0380015468.01.T01:CDS | 45.0% | |
| GGTACGTAAGTTCTCAATGG+AGG | + | Chr3:70602663-70602682 | MsG0380015468.01.T01:intron | 45.0% | |
| GTTTGAGGATACTCCTTTGG+TGG | - | Chr3:70603688-70603707 | None:intergenic | 45.0% | |
| TAATCTCCGTATGGAAACCG+TGG | - | Chr3:70602201-70602220 | None:intergenic | 45.0% | |
| TAGTCTCTATTAAGTCGCGG+TGG | + | Chr3:70602219-70602238 | MsG0380015468.01.T01:intron | 45.0% | |
| TATACAAAGGAGTTGGCTGG+AGG | + | Chr3:70604945-70604964 | MsG0380015468.01.T01:CDS | 45.0% | |
| TATTGTCCGACACGTGATGA+TGG | - | Chr3:70603428-70603447 | None:intergenic | 45.0% | |
| TCGAAATGGCCACGACATTA+TGG | - | Chr3:70604622-70604641 | None:intergenic | 45.0% | |
| TCGAACTCTTCGTCCCAAAT+AGG | - | Chr3:70605173-70605192 | None:intergenic | 45.0% | |
| TGAACATCCCTTGCATCAAC+CGG | - | Chr3:70604726-70604745 | None:intergenic | 45.0% | |
| TGAAGATGAAACATGGGGAC+AGG | + | Chr3:70603750-70603769 | MsG0380015468.01.T01:CDS | 45.0% | |
| TGCATGTCAAGCCATATGGT+AGG | - | Chr3:70604170-70604189 | None:intergenic | 45.0% | |
| TGGTTTATCACTGCTCTCAC+TGG | - | Chr3:70602956-70602975 | None:intergenic | 45.0% | |
| TTGACGGCGGTAAAGTTAGA+AGG | + | Chr3:70604030-70604049 | MsG0380015468.01.T01:CDS | 45.0% | |
| TTTGGTTAGTGCAACTGGAG+TGG | - | Chr3:70603170-70603189 | None:intergenic | 45.0% | |
| ! | AAATCACTCCGGTTGATGCA+AGG | + | Chr3:70604715-70604734 | MsG0380015468.01.T01:CDS | 45.0% |
| ! | AAGGGATCAGACGATTTTGC+TGG | + | Chr3:70605251-70605270 | MsG0380015468.01.T01:CDS | 45.0% |
| ! | AATCACTCCGGTTGATGCAA+GGG | + | Chr3:70604716-70604735 | MsG0380015468.01.T01:CDS | 45.0% |
| ! | CCACATTTAGGGTGGATGTA+TGG | + | Chr3:70604273-70604292 | MsG0380015468.01.T01:CDS | 45.0% |
| ! | TACACACGAAATGGAGGTGT+CGG | - | Chr3:70602418-70602437 | None:intergenic | 45.0% |
| !! | CGAGTTCTGGAACAGTCAAT+TGG | - | Chr3:70605199-70605218 | None:intergenic | 45.0% |
| ATCTCCGTATGGAAACCGTG+GGG | - | Chr3:70602199-70602218 | None:intergenic | 50.0% | |
| CTCATGGAGCCGACCTAATT+AGG | + | Chr3:70604093-70604112 | MsG0380015468.01.T01:CDS | 50.0% | |
| GCGTGACAGGTTTGTATTGC+TGG | + | Chr3:70605092-70605111 | MsG0380015468.01.T01:intron | 50.0% | |
| GGGATGTTCAAAGCGAATGG+AGG | + | Chr3:70604736-70604755 | MsG0380015468.01.T01:CDS | 50.0% | |
| GTGGATGTATGGAGCTCAGA+TGG | + | Chr3:70604284-70604303 | MsG0380015468.01.T01:CDS | 50.0% | |
| TATGCCCCACGGTTTCCATA+CGG | + | Chr3:70602192-70602211 | MsG0380015468.01.T01:intron | 50.0% | |
| TGTCAGCCATCATCACGTGT+CGG | + | Chr3:70603419-70603438 | MsG0380015468.01.T01:intron | 50.0% | |
| TTCAAAGCGAATGGAGGGTG+CGG | + | Chr3:70604742-70604761 | MsG0380015468.01.T01:CDS | 50.0% | |
| !! | ACACACGAAATGGAGGTGTC+GGG | - | Chr3:70602417-70602436 | None:intergenic | 50.0% |
| GAAACCGTGGGGCATATGTG+GGG | - | Chr3:70602188-70602207 | None:intergenic | 55.0% | |
| GAGAATCGGTCGAAGTGCGT+TGG | - | Chr3:70604983-70605002 | None:intergenic | 55.0% | |
| GGAAACCGTGGGGCATATGT+GGG | - | Chr3:70602189-70602208 | None:intergenic | 55.0% | |
| TGGAAACCGTGGGGCATATG+TGG | - | Chr3:70602190-70602209 | None:intergenic | 55.0% | |
| TGGGGCATATGTGGGGTACA+TGG | - | Chr3:70602181-70602200 | None:intergenic | 55.0% | |
| TGTACCCCACATATGCCCCA+CGG | + | Chr3:70602181-70602200 | MsG0380015468.01.T01:intron | 55.0% | |
| TTCCAGAACTCGCGTTGCTC+CGG | + | Chr3:70605207-70605226 | MsG0380015468.01.T01:CDS | 55.0% | |
| ! | AGGGGCATGGCAAATCACTC+CGG | + | Chr3:70604704-70604723 | MsG0380015468.01.T01:intron | 55.0% |
| ! | CTCACACTTTGGTGGGTACG+TGG | - | Chr3:70602107-70602126 | None:intergenic | 55.0% |
| AGCAAGGTGCGCGCGAATAC+AGG | + | Chr3:70603949-70603968 | MsG0380015468.01.T01:CDS | 60.0% | |
| ATCCGGAGCAACGCGAGTTC+TGG | - | Chr3:70605212-70605231 | None:intergenic | 60.0% | |
| TGTATTCGCGCGCACCTTGC+TGG | - | Chr3:70603950-70603969 | None:intergenic | 60.0% | |
| ! | GTCGGCTCCATGAGACTCAC+AGG | - | Chr3:70604087-70604106 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 70600870 | 70605638 | 70600870 | ID=MsG0380015468.01;Name=MsG0380015468.01 |
| Chr3 | mRNA | 70600870 | 70605638 | 70600870 | ID=MsG0380015468.01.T01;Parent=MsG0380015468.01;Name=MsG0380015468.01.T01;_AED=0.15;_eAED=0.15;_QI=384|0.87|0.88|1|0.87|1|9|232|593 |
| Chr3 | exon | 70603159 | 70603294 | 70603159 | ID=MsG0380015468.01.T01:exon:440;Parent=MsG0380015468.01.T01 |
| Chr3 | exon | 70603577 | 70603813 | 70603577 | ID=MsG0380015468.01.T01:exon:441;Parent=MsG0380015468.01.T01 |
| Chr3 | exon | 70603894 | 70604114 | 70603894 | ID=MsG0380015468.01.T01:exon:442;Parent=MsG0380015468.01.T01 |
| Chr3 | exon | 70604206 | 70604323 | 70604206 | ID=MsG0380015468.01.T01:exon:443;Parent=MsG0380015468.01.T01 |
| Chr3 | exon | 70604706 | 70604858 | 70604706 | ID=MsG0380015468.01.T01:exon:444;Parent=MsG0380015468.01.T01 |
| Chr3 | exon | 70604938 | 70605024 | 70604938 | ID=MsG0380015468.01.T01:exon:445;Parent=MsG0380015468.01.T01 |
| Chr3 | exon | 70605101 | 70605638 | 70605101 | ID=MsG0380015468.01.T01:exon:446;Parent=MsG0380015468.01.T01 |
| Chr3 | five_prime_UTR | 70600870 | 70601253 | 70600870 | ID=MsG0380015468.01.T01:five_prime_utr;Parent=MsG0380015468.01.T01 |
| Chr3 | CDS | 70601254 | 70601577 | 70601254 | ID=MsG0380015468.01.T01:cds;Parent=MsG0380015468.01.T01 |
| Chr3 | CDS | 70602871 | 70603070 | 70602871 | ID=MsG0380015468.01.T01:cds;Parent=MsG0380015468.01.T01 |
| Chr3 | CDS | 70603159 | 70603294 | 70603159 | ID=MsG0380015468.01.T01:cds;Parent=MsG0380015468.01.T01 |
| Chr3 | CDS | 70603577 | 70603813 | 70603577 | ID=MsG0380015468.01.T01:cds;Parent=MsG0380015468.01.T01 |
| Chr3 | CDS | 70603894 | 70604114 | 70603894 | ID=MsG0380015468.01.T01:cds;Parent=MsG0380015468.01.T01 |
| Chr3 | CDS | 70604206 | 70604323 | 70604206 | ID=MsG0380015468.01.T01:cds;Parent=MsG0380015468.01.T01 |
| Chr3 | CDS | 70604706 | 70604858 | 70604706 | ID=MsG0380015468.01.T01:cds;Parent=MsG0380015468.01.T01 |
| Chr3 | CDS | 70604938 | 70605024 | 70604938 | ID=MsG0380015468.01.T01:cds;Parent=MsG0380015468.01.T01 |
| Chr3 | CDS | 70605101 | 70605406 | 70605101 | ID=MsG0380015468.01.T01:cds;Parent=MsG0380015468.01.T01 |
| Chr3 | three_prime_UTR | 70605407 | 70605638 | 70605407 | ID=MsG0380015468.01.T01:three_prime_utr;Parent=MsG0380015468.01.T01 |
| Chr3 | mRNA | 70600870 | 70603339 | 70600870 | ID=MsG0380015468.01.T02;Parent=MsG0380015468.01;Name=MsG0380015468.01.T02;_AED=0.34;_eAED=0.35;_QI=384|1|0.66|1|1|1|3|0|234 |
| Chr3 | exon | 70603159 | 70603339 | 70603159 | ID=MsG0380015468.01.T02:exon:447;Parent=MsG0380015468.01.T02 |
| Chr3 | five_prime_UTR | 70600870 | 70601253 | 70600870 | ID=MsG0380015468.01.T02:five_prime_utr;Parent=MsG0380015468.01.T02 |
| Chr3 | CDS | 70601254 | 70601577 | 70601254 | ID=MsG0380015468.01.T02:cds;Parent=MsG0380015468.01.T02 |
| Chr3 | CDS | 70602871 | 70603070 | 70602871 | ID=MsG0380015468.01.T02:cds;Parent=MsG0380015468.01.T02 |
| Chr3 | CDS | 70603159 | 70603339 | 70603159 | ID=MsG0380015468.01.T02:cds;Parent=MsG0380015468.01.T02 |
| Gene Sequence |
| Protein sequence |
