AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047437.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047437.01.T01 MTR_4g127450 93.966 232 14 0 159 390 322 553 1.69e-152 447
MsG0880047437.01.T01 MTR_4g127450 100.000 75 0 0 71 145 55 129 5.06e-43 159
MsG0880047437.01.T01 MTR_4g127450 93.966 232 14 0 159 390 367 598 3.15e-151 445
MsG0880047437.01.T01 MTR_4g127450 100.000 75 0 0 71 145 100 174 1.29e-42 159
MsG0880047437.01.T01 MTR_4g127450 93.966 232 14 0 159 390 488 719 3.90e-149 443
MsG0880047437.01.T01 MTR_4g127450 100.000 75 0 0 71 145 221 295 2.57e-42 159
MsG0880047437.01.T01 MTR_4g127450 97.959 49 1 0 1 49 1 49 1.51e-23 103
MsG0880047437.01.T01 MTR_2g037930 47.059 272 100 5 159 389 481 749 7.33e-61 211
MsG0880047437.01.T01 MTR_2g037930 78.667 75 16 0 71 145 215 289 5.78e-32 128
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047437.01.T01 AT4G29950 79.221 77 15 1 70 145 76 152 1.21e-31 127
MsG0880047437.01.T01 AT4G29950 30.769 286 122 16 160 394 343 603 3.23e-15 78.2
MsG0880047437.01.T01 AT4G29950 79.221 77 15 1 70 145 201 277 1.65e-31 127
MsG0880047437.01.T01 AT4G29950 30.769 286 122 16 160 394 468 728 5.16e-15 77.4
MsG0880047437.01.T01 AT4G29950 79.221 77 15 1 70 145 193 269 1.91e-31 127
MsG0880047437.01.T01 AT4G29950 30.769 286 122 16 160 394 460 720 5.33e-15 77.4
MsG0880047437.01.T01 AT2G19240 64.000 75 27 0 71 145 205 279 2.41e-25 108
MsG0880047437.01.T01 AT2G19240 64.000 75 27 0 71 145 210 284 2.60e-25 108
MsG0880047437.01.T01 AT5G57210 68.182 66 19 1 82 145 233 298 1.35e-18 88.6
MsG0880047437.01.T01 AT5G57210 34.694 196 112 8 155 342 481 668 2.17e-13 72.4
MsG0880047437.01.T01 AT5G57210 68.182 66 19 1 82 145 94 159 1.57e-18 88.2
MsG0880047437.01.T01 AT5G57210 34.694 196 112 8 155 342 342 529 2.39e-13 72.0

Find 118 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAAGCTTTCGTTCATTTA+TGG 0.162389 8:-86300399 MsG0880047437.01.T01:five_prime_UTR
TTCTCTTATTCTCCTGTTGC+TGG 0.195760 8:-86297375 MsG0880047437.01.T01:CDS
ATGGGAACTTTAAAGAATAT+TGG 0.231802 8:-86295958 MsG0880047437.01.T01:CDS
TTCCAATGGCTTTGGAAGTT+TGG 0.270410 8:-86296143 MsG0880047437.01.T01:CDS
GAAATTCGGCCACACTTTCT+AGG 0.287597 8:-86296184 MsG0880047437.01.T01:CDS
AACAATCAAGAGTGGTAAAA+AGG 0.290842 8:-86296627 MsG0880047437.01.T01:CDS
CCTGTTGCTGGGTCCCATAC+TGG 0.298750 8:-86297363 MsG0880047437.01.T01:intron
TCTTCCCAGTAGCTATTATC+AGG 0.301549 8:+86296785 None:intergenic
TGGAAGTTTGGTCGTAATAA+TGG 0.314220 8:-86296131 MsG0880047437.01.T01:intron
CGTTTATTCGATGATCTTAG+AGG 0.318032 8:-86300185 MsG0880047437.01.T01:CDS
AAAGCTCGCATTTAAGCAAT+TGG 0.330967 8:-86300329 MsG0880047437.01.T01:five_prime_UTR
TGAATAAATTCCAATGGCTT+TGG 0.340110 8:-86296151 MsG0880047437.01.T01:CDS
GTAATAAACTCTTAGGAGTT+TGG 0.343630 8:+86296807 None:intergenic
AACACAATGGTCTGTATCTT+AGG 0.344300 8:+86297530 None:intergenic
TGGGAACTTTAAAGAATATT+GGG 0.350164 8:-86295957 MsG0880047437.01.T01:CDS
TCATGATATTTGAACTCATT+AGG 0.352589 8:+86296362 None:intergenic
TTGGGTCGGTGAACGCTTGC+CGG 0.362036 8:-86300310 MsG0880047437.01.T01:five_prime_UTR
AGAAAACATAACAATAAAAT+TGG 0.363376 8:+86300354 None:intergenic
AACAAAGGTTAATTTGTGTT+GGG 0.364533 8:+86300440 None:intergenic
GTGTTGCTAAGTGATGCTTA+TGG 0.369479 8:-86297512 MsG0880047437.01.T01:CDS
TGTTGCTAAGTGATGCTTAT+GGG 0.373836 8:-86297511 MsG0880047437.01.T01:CDS
TTATCAGGTAATAAACTCTT+AGG 0.382184 8:+86296800 None:intergenic
AATTGCTTAAATGCGAGCTT+TGG 0.387265 8:+86300331 None:intergenic
TAATGATTCCACAGGAAATT+CGG 0.392355 8:-86296198 MsG0880047437.01.T01:CDS
GTTTAAGTTCTTCAGCACTA+TGG 0.400618 8:+86296747 None:intergenic
TTACAGGTGGCAAACCAGTA+TGG 0.402275 8:+86297349 None:intergenic
TGCAGTGGCGTATAAATCTC+GGG 0.402658 8:-86300160 MsG0880047437.01.T01:CDS
AATCTCCGGCACCATTTCTC+AGG 0.406744 8:-86300225 MsG0880047437.01.T01:CDS
TTCTTCTGACCCAAGTTCCT+TGG 0.407632 8:+86296562 None:intergenic
CGGCACCATTTCTCAGGAAC+CGG 0.419436 8:-86300219 MsG0880047437.01.T01:CDS
CTCTTGATTGTTGACGAAGA+TGG 0.426953 8:+86296638 None:intergenic
AGCAACCTATCTCCGGTGGC+AGG 0.427699 8:-86296227 MsG0880047437.01.T01:CDS
TCTCTTATTCTCCTGTTGCT+GGG 0.437137 8:-86297374 MsG0880047437.01.T01:CDS
GCTTCAATTTGTGTATATAC+CGG 0.437939 8:+86300415 None:intergenic
TTATGGGGTTGAAGGTGAAC+TGG 0.438731 8:-86297495 MsG0880047437.01.T01:CDS
GAAGATCTATCCAAGGAACT+TGG 0.440583 8:-86296572 MsG0880047437.01.T01:CDS
CGGCACCGGTTCCTGAGAAA+TGG 0.440993 8:+86300214 None:intergenic
GAGAATTGAATTGTGTAGAA+AGG 0.443344 8:+86300497 None:intergenic
AATCATGCCACCGGCTCTGT+TGG 0.445482 8:-86300285 MsG0880047437.01.T01:exon
GGTTAATTTGTGTTGGGGAT+AGG 0.456301 8:+86300446 None:intergenic
CCAGTATGGGACCCAGCAAC+AGG 0.457235 8:+86297363 None:intergenic
TATTACCTGATAATAGCTAC+TGG 0.465123 8:-86296790 MsG0880047437.01.T01:CDS
CTCTCAGGATGATCAGAGAT+TGG 0.467104 8:+86296248 None:intergenic
TGTTTGAAGCTTTAATGAAT+GGG 0.467577 8:-86297427 MsG0880047437.01.T01:CDS
TGCGCCCTGCCACCGGAGAT+AGG 0.468340 8:+86296222 None:intergenic
ACAAATTAACCTTTGTTCCC+CGG 0.472308 8:-86300434 MsG0880047437.01.T01:five_prime_UTR
GAACAAAGGTTAATTTGTGT+TGG 0.478229 8:+86300439 None:intergenic
GAAATCGGTTCTCACGGAAA+AGG 0.478306 8:-86297584 MsG0880047437.01.T01:CDS
GTCTCACAGGAAAGTAGTGT+TGG 0.483922 8:-86296335 MsG0880047437.01.T01:CDS
CTTCAATTTGTGTATATACC+GGG 0.490332 8:+86300416 None:intergenic
TCGGTTTCGTCTTTAATCTC+CGG 0.491898 8:-86300239 MsG0880047437.01.T01:CDS
AGTGATGCTTATGGGGTTGA+AGG 0.500001 8:-86297503 MsG0880047437.01.T01:CDS
ATGTTTGAAGCTTTAATGAA+TGG 0.501384 8:-86297428 MsG0880047437.01.T01:CDS
TTGCAGTGGCGTATAAATCT+CGG 0.502978 8:-86300161 MsG0880047437.01.T01:CDS
AAATTTCATTAATTTCATCA+AGG 0.506660 8:+86296300 None:intergenic
ACCGGAGATAGGTTGCTCTC+AGG 0.509000 8:+86296233 None:intergenic
TCATTATTGCGCCCTGCCAC+CGG 0.512914 8:+86296215 None:intergenic
AAGCTCGCATTTAAGCAATT+GGG 0.514054 8:-86300328 MsG0880047437.01.T01:five_prime_UTR
CTACAGAATGATTATCCTGC+TGG 0.514134 8:+86296504 None:intergenic
CATTTCTCAGGAACCGGTGC+CGG 0.515085 8:-86300213 MsG0880047437.01.T01:CDS
GACCAAACTTCCAAAGCCAT+TGG 0.515271 8:+86296141 None:intergenic
TTACCTTCTTCGAGAATTAG+CGG 0.517058 8:+86300089 None:intergenic
GACTTGACGGATGACGAAAT+CGG 0.520473 8:-86297599 MsG0880047437.01.T01:CDS
GCTGAAGAACTTAAACAAGA+TGG 0.522754 8:-86296740 MsG0880047437.01.T01:CDS
TCCTGAGAGCAACCTATCTC+CGG 0.524052 8:-86296234 MsG0880047437.01.T01:CDS
ACAAAGGTTAATTTGTGTTG+GGG 0.528933 8:+86300441 None:intergenic
AATTGAATTGTGTAGAAAGG+AGG 0.529814 8:+86300500 None:intergenic
TCTGACATAAGCAACAATTA+CGG 0.532883 8:-86296452 MsG0880047437.01.T01:CDS
ATAGCTACTGGGAAGAAAAG+TGG 0.540693 8:-86296778 MsG0880047437.01.T01:CDS
AATAAACGATTCTCCGGCAC+CGG 0.546739 8:+86300200 None:intergenic
TCATGAAACATTATGCCAGC+AGG 0.547111 8:-86296519 MsG0880047437.01.T01:CDS
AATTTCATTAATTTCATCAA+GGG 0.549080 8:+86296301 None:intergenic
TCATCGAATAAACGATTCTC+CGG 0.551047 8:+86300194 None:intergenic
TACAGGTGGCAAACCAGTAT+GGG 0.551405 8:+86297350 None:intergenic
GAAGAAGATATAGAAAATCT+CGG 0.552372 8:-86296545 MsG0880047437.01.T01:CDS
GGATGATCAGAGATTGGAAG+AGG 0.553620 8:+86296254 None:intergenic
ATATCATGAAAATGTCTCAC+AGG 0.553655 8:-86296348 MsG0880047437.01.T01:CDS
GCTTTAATGAATGGGGCTCA+CGG 0.557113 8:-86297419 MsG0880047437.01.T01:CDS
GAGGCAGAGCAACAAGATGA+TGG 0.560054 8:-86296476 MsG0880047437.01.T01:CDS
GATTGGAAGAGGTGAATCGA+TGG 0.561413 8:+86296265 None:intergenic
TCTCACAGGAAAGTAGTGTT+GGG 0.563238 8:-86296334 MsG0880047437.01.T01:CDS
ACGGAAGAAGATGAAGAAGA+TGG 0.565967 8:+86300132 None:intergenic
GGGCGCAATAATGATTCCAC+AGG 0.567344 8:-86296206 MsG0880047437.01.T01:CDS
GTTTGAAGCTTTAATGAATG+GGG 0.569176 8:-86297426 MsG0880047437.01.T01:CDS
AATGAGAATGAAATGAAGAG+AGG 0.569573 8:+86300532 None:intergenic
ACTCATTAGGAGAACTAGCT+AGG 0.569589 8:+86296375 None:intergenic
GGCTCACGGTTCAGTTGCAA+TGG 0.571038 8:-86297405 MsG0880047437.01.T01:CDS
TAATCATTCTGTAGCAGTTG+AGG 0.571250 8:-86296495 MsG0880047437.01.T01:CDS
TATGGGGTTGAAGGTGAACT+GGG 0.574976 8:-86297494 MsG0880047437.01.T01:CDS
AAGATCTATCCAAGGAACTT+GGG 0.576219 8:-86296571 MsG0880047437.01.T01:CDS
CGGTTCCTGAGAAATGGTGC+CGG 0.583182 8:+86300220 None:intergenic
GTTGCTAAGTGATGCTTATG+GGG 0.585951 8:-86297510 MsG0880047437.01.T01:CDS
GCAACCTATCTCCGGTGGCA+GGG 0.587568 8:-86296226 MsG0880047437.01.T01:CDS
CCACCGCTAATTCTCGAAGA+AGG 0.589225 8:-86300092 MsG0880047437.01.T01:intron
TTGCCGGAAAATCATGCCAC+CGG 0.589609 8:-86300294 MsG0880047437.01.T01:exon
GGCGGATCCAACAGAGCCGG+TGG 0.589682 8:+86300278 None:intergenic
TAAAACTGAATAAATTCCAA+TGG 0.598877 8:-86296157 MsG0880047437.01.T01:CDS
ATTACCTGATAATAGCTACT+GGG 0.602058 8:-86296789 MsG0880047437.01.T01:CDS
TTCTGCTGACCAGAATGTGA+TGG 0.603860 8:-86295977 MsG0880047437.01.T01:intron
GTGTATATACCGGGGAACAA+AGG 0.605547 8:+86300425 None:intergenic
AATGGCGGATCCAACAGAGC+CGG 0.608631 8:+86300275 None:intergenic
ATTGGAAGAGGTGAATCGAT+GGG 0.609774 8:+86296266 None:intergenic
TTACCTGAAATGCTCAAGCA+TGG 0.611653 8:+86295930 None:intergenic
TTTGTTAGAAGATCTATCCA+AGG 0.617410 8:-86296579 MsG0880047437.01.T01:CDS
ATGATCTTAGAGGTTTGCAG+TGG 0.624245 8:-86300175 MsG0880047437.01.T01:CDS
TTCAATTTGTGTATATACCG+GGG 0.630929 8:+86300417 None:intergenic
TCTGCTGACCAGAATGTGAT+GGG 0.647152 8:-86295976 MsG0880047437.01.T01:intron
GATGACGAAATCGGTTCTCA+CGG 0.647201 8:-86297590 MsG0880047437.01.T01:CDS
GCAGTGGCGTATAAATCTCG+GGG 0.654536 8:-86300159 MsG0880047437.01.T01:CDS
AGATGTCTTAGCAGAAACAC+CGG 0.661553 8:-86296419 MsG0880047437.01.T01:CDS
GGCACGACGAAGATCATCAA+CGG 0.661655 8:+86300113 None:intergenic
AAGTGTGGCCGAATTTCCTG+TGG 0.661701 8:+86296190 None:intergenic
TGAGAGCAACCTATCTCCGG+TGG 0.662239 8:-86296231 MsG0880047437.01.T01:CDS
TCTTCGTCAACAATCAAGAG+TGG 0.663979 8:-86296635 MsG0880047437.01.T01:CDS
TCGCATTTAAGCAATTGGGT+CGG 0.664302 8:-86300324 MsG0880047437.01.T01:five_prime_UTR
AGCATCACTTAGCAACACAA+TGG 0.690065 8:+86297517 None:intergenic
CCTTCTTCGAGAATTAGCGG+TGG 0.702456 8:+86300092 None:intergenic
TAGCAGAAACACCGGCAGCG+AGG 0.719930 8:-86296411 MsG0880047437.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTCATTAATTTCATCA+AGG + Chr8:86300175-86300194 None:intergenic 15.0%
!! AATTTCATTAATTTCATCAA+GGG + Chr8:86300174-86300193 None:intergenic 15.0%
!! ACATAGTTTGATATAAATTA+TGG + Chr8:86297409-86297428 None:intergenic 15.0%
!! AGAAAACATAACAATAAAAT+TGG + Chr8:86296121-86296140 None:intergenic 15.0%
!! ATTTATATCAAACTATGTTT+CGG - Chr8:86297411-86297430 MsG0880047437.01.T01:CDS 15.0%
!! TTTATCAGATAATAGTAAAA+TGG - Chr8:86299314-86299333 MsG0880047437.01.T01:intron 15.0%
!!! TGTTTTTGTTTTTTTATGAT+TGG - Chr8:86296642-86296661 MsG0880047437.01.T01:CDS 15.0%
!!! TTTTATTCATACAGATAATA+TGG + Chr8:86298470-86298489 None:intergenic 15.0%
!!! TTTTGTCATATAATCTTTAA+TGG - Chr8:86298410-86298429 MsG0880047437.01.T01:intron 15.0%
!! AAAAATTGCAATGATTTACT+TGG + Chr8:86297171-86297190 None:intergenic 20.0%
!! AATAGAAGATAAGAAACTAA+GGG - Chr8:86297539-86297558 MsG0880047437.01.T01:CDS 20.0%
!! AATTTACATCCTTCTATAAT+TGG + Chr8:86296454-86296473 None:intergenic 20.0%
!! ACGTAGAAAAATATATAATC+TGG + Chr8:86297378-86297397 None:intergenic 20.0%
!! AGATCAAATCATTTATATCA+AGG - Chr8:86296798-86296817 MsG0880047437.01.T01:CDS 20.0%
!! CATAACATAAACAAGTTATA+CGG + Chr8:86298609-86298628 None:intergenic 20.0%
!! CTTAGTTAACTAGTAAAAAA+CGG - Chr8:86298320-86298339 MsG0880047437.01.T01:intron 20.0%
!! GAAAATAAAACTGAAAACAT+TGG + Chr8:86297575-86297594 None:intergenic 20.0%
!! TAAAACTGAATAAATTCCAA+TGG - Chr8:86300315-86300334 MsG0880047437.01.T01:five_prime_UTR 20.0%
!! TAATAGAAGATAAGAAACTA+AGG - Chr8:86297538-86297557 MsG0880047437.01.T01:CDS 20.0%
!! TATCCAAAATAAAATGCAAT+TGG + Chr8:86297006-86297025 None:intergenic 20.0%
!! TTAAAACATGTGAGAAAAAA+TGG + Chr8:86296481-86296500 None:intergenic 20.0%
!! TTGATATAAATTATGGAAGT+TGG + Chr8:86297402-86297421 None:intergenic 20.0%
!! TTTAATCCATTTATGGTATT+TGG - Chr8:86296496-86296515 MsG0880047437.01.T01:CDS 20.0%
!! TTTATATCAAACTATGTTTC+GGG - Chr8:86297412-86297431 MsG0880047437.01.T01:CDS 20.0%
!!! AACATAAATGATTAACTTGT+TGG - Chr8:86298535-86298554 MsG0880047437.01.T01:intron 20.0%
!!! GCTTCTTTTATTTATTTTGT+AGG - Chr8:86298667-86298686 MsG0880047437.01.T01:intron 20.0%
! AAGGTTAAGCTAAACAATAA+TGG - Chr8:86297482-86297501 MsG0880047437.01.T01:CDS 25.0%
! ATAAATCTATTTCCAGCATT+TGG - Chr8:86297212-86297231 MsG0880047437.01.T01:intron 25.0%
! ATAGAAGATAAGAAACTAAG+GGG - Chr8:86297540-86297559 MsG0880047437.01.T01:CDS 25.0%
! ATCAAAACAAAGACACTATA+AGG + Chr8:86296431-86296450 None:intergenic 25.0%
! ATTTATCCAGATGACATAAT+GGG + Chr8:86297198-86297217 None:intergenic 25.0%
! CAATTATGATAGAGAGAATA+TGG + Chr8:86297733-86297752 None:intergenic 25.0%
! CATTATCCAAATACCATAAA+TGG + Chr8:86296505-86296524 None:intergenic 25.0%
! CTTGTAGAATATAACAACAA+GGG - Chr8:86299590-86299609 MsG0880047437.01.T01:intron 25.0%
! GATAATGAGTTAATAGAACT+TGG - Chr8:86296953-86296972 MsG0880047437.01.T01:intron 25.0%
! TAAAAGAAGCTCATTAATGT+TGG + Chr8:86298657-86298676 None:intergenic 25.0%
! TAACTAAGCTTTCATTCATT+AGG + Chr8:86298308-86298327 None:intergenic 25.0%
! TACTGAGTAATAGGAATTTA+TGG + Chr8:86297249-86297268 None:intergenic 25.0%
! TCATGATATTTGAACTCATT+AGG + Chr8:86300113-86300132 None:intergenic 25.0%
! TCGAAAAAATAGATGGATAA+TGG + Chr8:86297355-86297374 None:intergenic 25.0%
! TTAAAAAATCTCAGACTTGA+CGG - Chr8:86298860-86298879 MsG0880047437.01.T01:intron 25.0%
! TTATCAGGTAATAAACTCTT+AGG + Chr8:86299675-86299694 None:intergenic 25.0%
! TTTATATGCAGATAGTACAT+GGG - Chr8:86297936-86297955 MsG0880047437.01.T01:intron 25.0%
!! AAAAAATAGATGGATAATGG+AGG + Chr8:86297352-86297371 None:intergenic 25.0%
!! ATGGGAACTTTAAAGAATAT+TGG - Chr8:86300514-86300533 MsG0880047437.01.T01:five_prime_UTR 25.0%
!! ATGTTTGAAGCTTTAATGAA+TGG - Chr8:86299044-86299063 MsG0880047437.01.T01:intron 25.0%
!! GCATTTTCAGAAATTTTGAA+AGG - Chr8:86297661-86297680 MsG0880047437.01.T01:intron 25.0%
!! TGCAGTACTGTTAATTTTAA+TGG - Chr8:86300469-86300488 MsG0880047437.01.T01:five_prime_UTR 25.0%
!! TGGGAACTTTAAAGAATATT+GGG - Chr8:86300515-86300534 MsG0880047437.01.T01:five_prime_UTR 25.0%
!! TGTTTGAAGCTTTAATGAAT+GGG - Chr8:86299045-86299064 MsG0880047437.01.T01:intron 25.0%
!! TTTTAATGTTTGTGTTCTCT+GGG + Chr8:86299499-86299518 None:intergenic 25.0%
!! TTTTATATTCCTAGAAAGTG+TGG + Chr8:86300300-86300319 None:intergenic 25.0%
!! TTTTTAATGTTTGTGTTCTC+TGG + Chr8:86299500-86299519 None:intergenic 25.0%
!!! AACAAAGGTTAATTTGTGTT+GGG + Chr8:86296035-86296054 None:intergenic 25.0%
!!! ATTTACTTTTCCTTCTAACT+CGG - Chr8:86298199-86298218 MsG0880047437.01.T01:intron 25.0%
!!! CACATGTTTTAATCCATTTA+TGG - Chr8:86296489-86296508 MsG0880047437.01.T01:CDS 25.0%
!!! GATCCAATTGCATTTTATTT+TGG - Chr8:86297000-86297019 MsG0880047437.01.T01:intron 25.0%
!!! GCTAGATTTGTTTTCAAAAA+CGG + Chr8:86297643-86297662 None:intergenic 25.0%
!!! TGAGACGGATTTTATTATTA+TGG - Chr8:86298065-86298084 MsG0880047437.01.T01:intron 25.0%
!!! TGTTTTGATCCAATTATAGA+AGG - Chr8:86296442-86296461 MsG0880047437.01.T01:CDS 25.0%
!!! TTCGTTTTAAATTGCTAACA+AGG + Chr8:86297779-86297798 None:intergenic 25.0%
AAAAACGGTGAGAAAATACT+TGG + Chr8:86297628-86297647 None:intergenic 30.0%
AACAATCAAGAGTGGTAAAA+AGG - Chr8:86299845-86299864 MsG0880047437.01.T01:intron 30.0%
AATCTGGTCGAAAAAATAGA+TGG + Chr8:86297362-86297381 None:intergenic 30.0%
AATTGAATTGTGTAGAAAGG+AGG + Chr8:86295975-86295994 None:intergenic 30.0%
ACTTTGATCGTTATACTTGT+TGG + Chr8:86300416-86300435 None:intergenic 30.0%
AGGAATTTATGGCAGTATAA+CGG + Chr8:86297238-86297257 None:intergenic 30.0%
ATATCATGAAAATGTCTCAC+AGG - Chr8:86300124-86300143 MsG0880047437.01.T01:CDS 30.0%
ATCATTTACAGCAGATTTGA+TGG - Chr8:86298771-86298790 MsG0880047437.01.T01:intron 30.0%
ATTACCTGATAATAGCTACT+GGG - Chr8:86299683-86299702 MsG0880047437.01.T01:intron 30.0%
CAACAACACTCAAACTTAAA+TGG + Chr8:86296866-86296885 None:intergenic 30.0%
CTTCAATTTGTGTATATACC+GGG + Chr8:86296059-86296078 None:intergenic 30.0%
CTTTATATGCAGATAGTACA+TGG - Chr8:86297935-86297954 MsG0880047437.01.T01:intron 30.0%
GAAAAATAGATGGACAGAAA+AGG - Chr8:86299779-86299798 MsG0880047437.01.T01:intron 30.0%
GAATTATGAACTGCTTTCTT+GGG - Chr8:86298573-86298592 MsG0880047437.01.T01:intron 30.0%
GAGAATTGAATTGTGTAGAA+AGG + Chr8:86295978-86295997 None:intergenic 30.0%
GATTTATCCAGATGACATAA+TGG + Chr8:86297199-86297218 None:intergenic 30.0%
GCTTCAATTTGTGTATATAC+CGG + Chr8:86296060-86296079 None:intergenic 30.0%
GCTTGTAGAATATAACAACA+AGG - Chr8:86299589-86299608 MsG0880047437.01.T01:intron 30.0%
GTAATAAACTCTTAGGAGTT+TGG + Chr8:86299668-86299687 None:intergenic 30.0%
TAAACAAGTTATACGGAATC+TGG + Chr8:86298602-86298621 None:intergenic 30.0%
TAAATACGTTTGCTCACTTT+GGG - Chr8:86298171-86298190 MsG0880047437.01.T01:intron 30.0%
TAACTCATTATCTCTCAAGA+TGG + Chr8:86296945-86296964 None:intergenic 30.0%
TAATGATTCCACAGGAAATT+CGG - Chr8:86300274-86300293 MsG0880047437.01.T01:CDS 30.0%
TATTACCTGATAATAGCTAC+TGG - Chr8:86299682-86299701 MsG0880047437.01.T01:intron 30.0%
TCTGACATAAGCAACAATTA+CGG - Chr8:86300020-86300039 MsG0880047437.01.T01:intron 30.0%
TGAATAAATTCCAATGGCTT+TGG - Chr8:86300321-86300340 MsG0880047437.01.T01:five_prime_UTR 30.0%
TGAATTATGAACTGCTTTCT+TGG - Chr8:86298572-86298591 MsG0880047437.01.T01:intron 30.0%
TGTTTCGATCGTATAGATTT+GGG - Chr8:86296884-86296903 MsG0880047437.01.T01:intron 30.0%
TTAAATTGCTAACAAGGAGA+TGG + Chr8:86297773-86297792 None:intergenic 30.0%
TTATATGCAGATAGTACATG+GGG - Chr8:86297937-86297956 MsG0880047437.01.T01:intron 30.0%
TTCAATTTGTGTATATACCG+GGG + Chr8:86296058-86296077 None:intergenic 30.0%
TTCCATCTCAGAAAAATAGA+TGG - Chr8:86299769-86299788 MsG0880047437.01.T01:intron 30.0%
TTGAAGCTTTCGTTCATTTA+TGG - Chr8:86296073-86296092 MsG0880047437.01.T01:intron 30.0%
TTGTTTCGATCGTATAGATT+TGG - Chr8:86296883-86296902 MsG0880047437.01.T01:intron 30.0%
TTTATCCAGATGACATAATG+GGG + Chr8:86297197-86297216 None:intergenic 30.0%
TTTGTTAGAAGATCTATCCA+AGG - Chr8:86299893-86299912 MsG0880047437.01.T01:intron 30.0%
! ATGTTTTCAGAAAGTAAACG+CGG - Chr8:86297822-86297841 MsG0880047437.01.T01:intron 30.0%
! GTTTGAAGCTTTAATGAATG+GGG - Chr8:86299046-86299065 MsG0880047437.01.T01:intron 30.0%
! TTAATGTTTCTAATCCTGTC+AGG - Chr8:86297048-86297067 MsG0880047437.01.T01:intron 30.0%
! TTACTTGGATTTTGTGAAAG+CGG + Chr8:86297156-86297175 None:intergenic 30.0%
!! AAAGTTCAGAGCTTTATTGA+TGG - Chr8:86296544-86296563 MsG0880047437.01.T01:CDS 30.0%
!! AAGTTCAGAGCTTTATTGAT+GGG - Chr8:86296545-86296564 MsG0880047437.01.T01:CDS 30.0%
!! ACAAAGGTTAATTTGTGTTG+GGG + Chr8:86296034-86296053 None:intergenic 30.0%
!! GAACAAAGGTTAATTTGTGT+TGG + Chr8:86296036-86296055 None:intergenic 30.0%
AAAAGCGAACCAATTAAGCA+CGG + Chr8:86298230-86298249 None:intergenic 35.0%
AAAATCCGTCTCAATATCCT+TGG + Chr8:86298058-86298077 None:intergenic 35.0%
AAAGCTCGCATTTAAGCAAT+TGG - Chr8:86296143-86296162 MsG0880047437.01.T01:CDS 35.0%
AACAAAGACACTATAAGGCA+TGG + Chr8:86296426-86296445 None:intergenic 35.0%
AACACAATGGTCTGTATCTT+AGG + Chr8:86298945-86298964 None:intergenic 35.0%
AACTTGGAGACATAAAGCAA+AGG + Chr8:86298712-86298731 None:intergenic 35.0%
AAGATCTATCCAAGGAACTT+GGG - Chr8:86299901-86299920 MsG0880047437.01.T01:intron 35.0%
AAGCTCGCATTTAAGCAATT+GGG - Chr8:86296144-86296163 MsG0880047437.01.T01:CDS 35.0%
AATGGCAATCAACAAATGCT+TGG - Chr8:86297500-86297519 MsG0880047437.01.T01:CDS 35.0%
AATTGCTTAAATGCGAGCTT+TGG + Chr8:86296144-86296163 None:intergenic 35.0%
ACAAATTAACCTTTGTTCCC+CGG - Chr8:86296038-86296057 MsG0880047437.01.T01:intron 35.0%
ACCAATAATAGCAAGGAACT+TGG + Chr8:86296589-86296608 None:intergenic 35.0%
ATATCAAACTATGTTTCGGG+AGG - Chr8:86297415-86297434 MsG0880047437.01.T01:CDS 35.0%
ATTTATCTCAGCTATTGCTG+TGG - Chr8:86299398-86299417 MsG0880047437.01.T01:intron 35.0%
CAAAGTGAGCAAACGTATTT+AGG + Chr8:86298172-86298191 None:intergenic 35.0%
CCAATAATAGCAAGGAACTT+GGG + Chr8:86296588-86296607 None:intergenic 35.0%
CGTTTATTCGATGATCTTAG+AGG - Chr8:86296287-86296306 MsG0880047437.01.T01:CDS 35.0%
CTAAATACGTTTGCTCACTT+TGG - Chr8:86298170-86298189 MsG0880047437.01.T01:intron 35.0%
CTTGCTCTATACTGAGTAAT+AGG + Chr8:86297258-86297277 None:intergenic 35.0%
GCAACTATTTCCAGACAAAA+GGG - Chr8:86298030-86298049 MsG0880047437.01.T01:intron 35.0%
GCTGAAGAACTTAAACAAGA+TGG - Chr8:86299732-86299751 MsG0880047437.01.T01:intron 35.0%
GCTTATCACCAATAATAGCA+AGG + Chr8:86296596-86296615 None:intergenic 35.0%
GTATCATTTATTGTCGCATG+TGG - Chr8:86299165-86299184 MsG0880047437.01.T01:intron 35.0%
TAATCATTCTGTAGCAGTTG+AGG - Chr8:86299977-86299996 MsG0880047437.01.T01:intron 35.0%
TACTTTCATCCTTGTAACGT+GGG + Chr8:86297107-86297126 None:intergenic 35.0%
TATTGTGTGTAACTGTTGCT+TGG + Chr8:86298136-86298155 None:intergenic 35.0%
TCATACAGATAATATGGCAG+TGG + Chr8:86298464-86298483 None:intergenic 35.0%
TCATCGAATAAACGATTCTC+CGG + Chr8:86296281-86296300 None:intergenic 35.0%
TCTTTGTCAAGACAGATTGA+TGG - Chr8:86298796-86298815 MsG0880047437.01.T01:intron 35.0%
TGGAAGTTTGGTCGTAATAA+TGG - Chr8:86300341-86300360 MsG0880047437.01.T01:five_prime_UTR 35.0%
TGTTGCTAAGTGATGCTTAT+GGG - Chr8:86298961-86298980 MsG0880047437.01.T01:intron 35.0%
TTAAAGTTCCCATCACATTC+TGG + Chr8:86300507-86300526 None:intergenic 35.0%
TTACCTTCTTCGAGAATTAG+CGG + Chr8:86296386-86296405 None:intergenic 35.0%
TTGTTATATTCTACAAGCGC+AGG + Chr8:86299587-86299606 None:intergenic 35.0%
! CATTTTATTGTCACCACAGA+TGG + Chr8:86297913-86297932 None:intergenic 35.0%
! GTTTAAGTTCTTCAGCACTA+TGG + Chr8:86299728-86299747 None:intergenic 35.0%
! TAAAATGGAAAAGCATGCAG+AGG - Chr8:86299329-86299348 MsG0880047437.01.T01:intron 35.0%
! TACTTGGATTTTGTGAAAGC+GGG + Chr8:86297155-86297174 None:intergenic 35.0%
! TCTTGCACTTTTCATGAGAT+AGG - Chr8:86297309-86297328 MsG0880047437.01.T01:intron 35.0%
! TGTGCTAAGGCTAGTTATAT+AGG + Chr8:86298277-86298296 None:intergenic 35.0%
!! ACAACACAGACACTTGTTTT+AGG - Chr8:86299352-86299371 MsG0880047437.01.T01:intron 35.0%
!! GTCCATCTATTTTTCTGAGA+TGG + Chr8:86299774-86299793 None:intergenic 35.0%
!! TTTATGTCTCCAAGTTGATG+TGG - Chr8:86298716-86298735 MsG0880047437.01.T01:intron 35.0%
ACGGAAGAAGATGAAGAAGA+TGG + Chr8:86296343-86296362 None:intergenic 40.0%
ACTCATTAGGAGAACTAGCT+AGG + Chr8:86300100-86300119 None:intergenic 40.0%
ACTTAATGCAAGAGTCTGCA+AGG + Chr8:86299543-86299562 None:intergenic 40.0%
AGAAGGTAAGCCAATTCACT+TGG - Chr8:86296397-86296416 MsG0880047437.01.T01:CDS 40.0%
AGATGTCTTAGCAGAAACAC+CGG - Chr8:86300053-86300072 MsG0880047437.01.T01:intron 40.0%
AGCAAACGTATTTAGGAGGA+AGG + Chr8:86298165-86298184 None:intergenic 40.0%
AGCATCACTTAGCAACACAA+TGG + Chr8:86298958-86298977 None:intergenic 40.0%
AGGATCTTTCATTCATCTCG+CGG - Chr8:86299372-86299391 MsG0880047437.01.T01:intron 40.0%
AGTGAGCAAACGTATTTAGG+AGG + Chr8:86298169-86298188 None:intergenic 40.0%
ATAGCTACTGGGAAGAAAAG+TGG - Chr8:86299694-86299713 MsG0880047437.01.T01:intron 40.0%
ATCTCATGCTCTCTACACTA+TGG - Chr8:86298369-86298388 MsG0880047437.01.T01:intron 40.0%
ATGATCTTAGAGGTTTGCAG+TGG - Chr8:86296297-86296316 MsG0880047437.01.T01:CDS 40.0%
ATTGGAAGAGGTGAATCGAT+GGG + Chr8:86300209-86300228 None:intergenic 40.0%
CCTTTCAATAAAGCAGATGC+AGG + Chr8:86298501-86298520 None:intergenic 40.0%
CTACAGAATGATTATCCTGC+TGG + Chr8:86299971-86299990 None:intergenic 40.0%
CTACTTTCATCCTTGTAACG+TGG + Chr8:86297108-86297127 None:intergenic 40.0%
CTCTCAACAAGCACAATACA+TGG - Chr8:86296688-86296707 MsG0880047437.01.T01:CDS 40.0%
CTCTTGATTGTTGACGAAGA+TGG + Chr8:86299837-86299856 None:intergenic 40.0%
CTGGGAAGCTTAATAATCTC+TGG + Chr8:86299481-86299500 None:intergenic 40.0%
GAAGATCTATCCAAGGAACT+TGG - Chr8:86299900-86299919 MsG0880047437.01.T01:intron 40.0%
GATCGTATAGATTTGGGCAT+TGG - Chr8:86296890-86296909 MsG0880047437.01.T01:intron 40.0%
GCCATTGTCAAAAACAGCAT+CGG - Chr8:86296214-86296233 MsG0880047437.01.T01:CDS 40.0%
GGAAATAGTTGCCATGTTCT+GGG + Chr8:86298022-86298041 None:intergenic 40.0%
GGCAACTATTTCCAGACAAA+AGG - Chr8:86298029-86298048 MsG0880047437.01.T01:intron 40.0%
GTTGCTAAGTGATGCTTATG+GGG - Chr8:86298962-86298981 MsG0880047437.01.T01:intron 40.0%
TACCTTGTCTATAACCCACT+CGG + Chr8:86298103-86298122 None:intergenic 40.0%
TAGTTCACCCAATCTTGTCA+TGG - Chr8:86297125-86297144 MsG0880047437.01.T01:intron 40.0%
TATAGCCATCTCGTTGATCT+CGG - Chr8:86299199-86299218 MsG0880047437.01.T01:intron 40.0%
TCACGTTTATACCCAGAACA+TGG - Chr8:86298008-86298027 MsG0880047437.01.T01:intron 40.0%
TCATGAAACATTATGCCAGC+AGG - Chr8:86299953-86299972 MsG0880047437.01.T01:intron 40.0%
TCGCATTTAAGCAATTGGGT+CGG - Chr8:86296148-86296167 MsG0880047437.01.T01:CDS 40.0%
TCGGTAAAACCGTGCTTAAT+TGG - Chr8:86298218-86298237 MsG0880047437.01.T01:intron 40.0%
TCGGTTTCGTCTTTAATCTC+CGG - Chr8:86296233-86296252 MsG0880047437.01.T01:CDS 40.0%
TCTCACAGGAAAGTAGTGTT+GGG - Chr8:86300138-86300157 MsG0880047437.01.T01:CDS 40.0%
TCTCTTATTCTCCTGTTGCT+GGG - Chr8:86299098-86299117 MsG0880047437.01.T01:intron 40.0%
TCTTCCCAGTAGCTATTATC+AGG + Chr8:86299690-86299709 None:intergenic 40.0%
TCTTCGTCAACAATCAAGAG+TGG - Chr8:86299837-86299856 MsG0880047437.01.T01:intron 40.0%
TGAACCTGATTCACATGCAA+TGG + Chr8:86299645-86299664 None:intergenic 40.0%
TGCTCTCTACACTATGGAAA+CGG - Chr8:86298375-86298394 MsG0880047437.01.T01:intron 40.0%
TGGAAATAGTTGCCATGTTC+TGG + Chr8:86298023-86298042 None:intergenic 40.0%
TTACACCCCATTATGTCATC+TGG - Chr8:86297189-86297208 MsG0880047437.01.T01:intron 40.0%
TTCTCTTATTCTCCTGTTGC+TGG - Chr8:86299097-86299116 MsG0880047437.01.T01:intron 40.0%
TTGCAGTGGCGTATAAATCT+CGG - Chr8:86296311-86296330 MsG0880047437.01.T01:CDS 40.0%
! CCTGCATCTGCTTTATTGAA+AGG - Chr8:86298498-86298517 MsG0880047437.01.T01:intron 40.0%
! GCTTAATAATCTCTGGAGAC+AGG + Chr8:86299474-86299493 None:intergenic 40.0%
! GTGTTGCTAAGTGATGCTTA+TGG - Chr8:86298960-86298979 MsG0880047437.01.T01:intron 40.0%
! TCAGGTATGCTAGTTTGAGA+GGG - Chr8:86297066-86297085 MsG0880047437.01.T01:intron 40.0%
!! AGAAAAGAGTACTGCTTCTG+AGG - Chr8:86300378-86300397 MsG0880047437.01.T01:five_prime_UTR 40.0%
!! CCCAAGTTCCTTGCTATTAT+TGG - Chr8:86296585-86296604 MsG0880047437.01.T01:CDS 40.0%
!! GCGTTGATTTATTCGTCATG+TGG - Chr8:86296912-86296931 MsG0880047437.01.T01:intron 40.0%
!! GGTTAATTTGTGTTGGGGAT+AGG + Chr8:86296029-86296048 None:intergenic 40.0%
!! TTCCAATGGCTTTGGAAGTT+TGG - Chr8:86300329-86300348 MsG0880047437.01.T01:five_prime_UTR 40.0%
!!! ACCGATGCTGTTTTTGACAA+TGG + Chr8:86296218-86296237 None:intergenic 40.0%
!!! CGCTGGTTGAGAGTTTTATT+TGG - Chr8:86299246-86299265 MsG0880047437.01.T01:intron 40.0%
!!! GATGCTGTTTTTGACAATGG+CGG + Chr8:86296215-86296234 None:intergenic 40.0%
!!! GTTTTTTCACAATGCAGAGC+TGG - Chr8:86297962-86297981 MsG0880047437.01.T01:intron 40.0%
AAGATCACCAGCTGTAGAAG+AGG + Chr8:86300449-86300468 None:intergenic 45.0%
AATAAACGATTCTCCGGCAC+CGG + Chr8:86296275-86296294 None:intergenic 45.0%
ACCACCATTGCATGTGAATC+AGG - Chr8:86299638-86299657 MsG0880047437.01.T01:intron 45.0%
ACCTGATTCACATGCAATGG+TGG + Chr8:86299642-86299661 None:intergenic 45.0%
AGTGATGCTTATGGGGTTGA+AGG - Chr8:86298969-86298988 MsG0880047437.01.T01:intron 45.0%
ATAGCCATCTCGTTGATCTC+GGG - Chr8:86299200-86299219 MsG0880047437.01.T01:intron 45.0%
ATTTCATCCCAGACGATCAG+AGG + Chr8:86299292-86299311 None:intergenic 45.0%
CTCAAACTAGCATACCTGAC+AGG + Chr8:86297065-86297084 None:intergenic 45.0%
CTCTCAGGATGATCAGAGAT+TGG + Chr8:86300227-86300246 None:intergenic 45.0%
GAAATTCGGCCACACTTTCT+AGG - Chr8:86300288-86300307 MsG0880047437.01.T01:exon 45.0%
GACCAAACTTCCAAAGCCAT+TGG + Chr8:86300334-86300353 None:intergenic 45.0%
GATTGGAAGAGGTGAATCGA+TGG + Chr8:86300210-86300229 None:intergenic 45.0%
GCAGAAGCTTCAATTACAGG+TGG + Chr8:86299139-86299158 None:intergenic 45.0%
GCAGCAGAAGCTTCAATTAC+AGG + Chr8:86299142-86299161 None:intergenic 45.0%
GCTCTCTACACTATGGAAAC+GGG - Chr8:86298376-86298395 MsG0880047437.01.T01:intron 45.0%
GCTTTAATGAATGGGGCTCA+CGG - Chr8:86299053-86299072 MsG0880047437.01.T01:intron 45.0%
GGATGATCAGAGATTGGAAG+AGG + Chr8:86300221-86300240 None:intergenic 45.0%
GGCATGGTTACCAAGTGAAT+TGG + Chr8:86296410-86296429 None:intergenic 45.0%
GGGTTGTCCATGACAAGATT+GGG + Chr8:86297135-86297154 None:intergenic 45.0%
GTCTCACAGGAAAGTAGTGT+TGG - Chr8:86300137-86300156 MsG0880047437.01.T01:CDS 45.0%
GTGTATATACCGGGGAACAA+AGG + Chr8:86296050-86296069 None:intergenic 45.0%
TACAGGTGGCAAACCAGTAT+GGG + Chr8:86299125-86299144 None:intergenic 45.0%
TATCTAACCCTCTCTTTCCG+TGG - Chr8:86297885-86297904 MsG0880047437.01.T01:intron 45.0%
TATGGGGTTGAAGGTGAACT+GGG - Chr8:86298978-86298997 MsG0880047437.01.T01:intron 45.0%
TCTGCTGACCAGAATGTGAT+GGG - Chr8:86300496-86300515 MsG0880047437.01.T01:five_prime_UTR 45.0%
TGCAGTGGCGTATAAATCTC+GGG - Chr8:86296312-86296331 MsG0880047437.01.T01:CDS 45.0%
TTACAGGTGGCAAACCAGTA+TGG + Chr8:86299126-86299145 None:intergenic 45.0%
TTAGGCGTGCTAATGTGCTA+AGG + Chr8:86298290-86298309 None:intergenic 45.0%
TTATGGGGTTGAAGGTGAAC+TGG - Chr8:86298977-86298996 MsG0880047437.01.T01:intron 45.0%
TTCTGCTGACCAGAATGTGA+TGG - Chr8:86300495-86300514 MsG0880047437.01.T01:five_prime_UTR 45.0%
TTCTTCTGACCCAAGTTCCT+TGG + Chr8:86299913-86299932 None:intergenic 45.0%
TTGACAACCTCTGATCGTCT+GGG - Chr8:86299282-86299301 MsG0880047437.01.T01:intron 45.0%
! CACGGTTTTACCGAGTTAGA+AGG + Chr8:86298212-86298231 None:intergenic 45.0%
! GAAATCGGTTCTCACGGAAA+AGG - Chr8:86298888-86298907 MsG0880047437.01.T01:intron 45.0%
! GACTTGACGGATGACGAAAT+CGG - Chr8:86298873-86298892 MsG0880047437.01.T01:intron 45.0%
! GATGACGAAATCGGTTCTCA+CGG - Chr8:86298882-86298901 MsG0880047437.01.T01:intron 45.0%
! GTCAGGTATGCTAGTTTGAG+AGG - Chr8:86297065-86297084 MsG0880047437.01.T01:intron 45.0%
! TACGTTTGCTCACTTTGGGA+TGG - Chr8:86298175-86298194 MsG0880047437.01.T01:intron 45.0%
!! ATCCGAGTGGGTTATAGACA+AGG - Chr8:86298098-86298117 MsG0880047437.01.T01:intron 45.0%
AAGGAGATGGAAGACTCGTG+TGG + Chr8:86297760-86297779 None:intergenic 50.0%
AAGTGTGGCCGAATTTCCTG+TGG + Chr8:86300285-86300304 None:intergenic 50.0%
AATCTCCGGCACCATTTCTC+AGG - Chr8:86296247-86296266 MsG0880047437.01.T01:CDS 50.0%
ACAGCTTCCTCTTCTACAGC+TGG - Chr8:86300439-86300458 MsG0880047437.01.T01:five_prime_UTR 50.0%
CACAGTACTTTGCTCTACGC+TGG - Chr8:86299229-86299248 MsG0880047437.01.T01:intron 50.0%
CCACCGCTAATTCTCGAAGA+AGG - Chr8:86296380-86296399 MsG0880047437.01.T01:CDS 50.0%
CCTTCTTCGAGAATTAGCGG+TGG + Chr8:86296383-86296402 None:intergenic 50.0%
CGGGTTGTCCATGACAAGAT+TGG + Chr8:86297136-86297155 None:intergenic 50.0%
CTGGTTGATCCCACGTTACA+AGG - Chr8:86297095-86297114 MsG0880047437.01.T01:intron 50.0%
CTTGACAACCTCTGATCGTC+TGG - Chr8:86299281-86299300 MsG0880047437.01.T01:intron 50.0%
CTTGTAACGTGGGATCAACC+AGG + Chr8:86297097-86297116 None:intergenic 50.0%
GAGGCAGAGCAACAAGATGA+TGG - Chr8:86299996-86300015 MsG0880047437.01.T01:intron 50.0%
GCAGTATAACGGCCAAATGC+TGG + Chr8:86297227-86297246 None:intergenic 50.0%
GCAGTGGCGTATAAATCTCG+GGG - Chr8:86296313-86296332 MsG0880047437.01.T01:CDS 50.0%
GGCACGACGAAGATCATCAA+CGG + Chr8:86296362-86296381 None:intergenic 50.0%
GGGCGCAATAATGATTCCAC+AGG - Chr8:86300266-86300285 MsG0880047437.01.T01:CDS 50.0%
GGGTGCCAAGGATATTGAGA+CGG - Chr8:86298050-86298069 MsG0880047437.01.T01:intron 50.0%
GGTGTCTTAGACATCCGAGT+GGG - Chr8:86298086-86298105 MsG0880047437.01.T01:intron 50.0%
GTGCAACTGCACTCACAAGA+AGG - Chr8:86297463-86297482 MsG0880047437.01.T01:CDS 50.0%
TCAACCCGAGATCAACGAGA+TGG + Chr8:86299207-86299226 None:intergenic 50.0%
TCCTGAGAGCAACCTATCTC+CGG - Chr8:86300238-86300257 MsG0880047437.01.T01:CDS 50.0%
TGGTGTCTTAGACATCCGAG+TGG - Chr8:86298085-86298104 MsG0880047437.01.T01:intron 50.0%
TTCACAATGCAGAGCTGGAG+AGG - Chr8:86297967-86297986 MsG0880047437.01.T01:intron 50.0%
TTGCCGGAAAATCATGCCAC+CGG - Chr8:86296178-86296197 MsG0880047437.01.T01:CDS 50.0%
! AATCTCTGGAGACAGGTCGT+AGG + Chr8:86299467-86299486 None:intergenic 50.0%
! ATCCTTGGCACCCTTTTGTC+TGG + Chr8:86298043-86298062 None:intergenic 50.0%
! GAATGAGTTTTCCTCGCTGC+CGG + Chr8:86300075-86300094 None:intergenic 50.0%
! GGTATGCTAGTTTGAGAGGG+CGG - Chr8:86297069-86297088 MsG0880047437.01.T01:intron 50.0%
! GTGTAACTGTTGCTTGGCTG+AGG + Chr8:86298130-86298149 None:intergenic 50.0%
!! CAGCGTAGAGCAAAGTACTG+TGG + Chr8:86299231-86299250 None:intergenic 50.0%
!! TTCCAGACAAAAGGGTGCCA+AGG - Chr8:86298038-86298057 MsG0880047437.01.T01:intron 50.0%
ACCGGAGATAGGTTGCTCTC+AGG + Chr8:86300242-86300261 None:intergenic 55.0%
AGATGGAGCCACGGAAAGAG+AGG + Chr8:86297896-86297915 None:intergenic 55.0%
CAATGCAGAGCTGGAGAGGA+TGG - Chr8:86297971-86297990 MsG0880047437.01.T01:intron 55.0%
CATTTCTCAGGAACCGGTGC+CGG - Chr8:86296259-86296278 MsG0880047437.01.T01:CDS 55.0%
CGGCACCATTTCTCAGGAAC+CGG - Chr8:86296253-86296272 MsG0880047437.01.T01:CDS 55.0%
CGGTTCCTGAGAAATGGTGC+CGG + Chr8:86296255-86296274 None:intergenic 55.0%
GATGGAGCCACGGAAAGAGA+GGG + Chr8:86297895-86297914 None:intergenic 55.0%
GCAAGCGCTCCACATCAACT+TGG + Chr8:86298728-86298747 None:intergenic 55.0%
GGCTCACGGTTCAGTTGCAA+TGG - Chr8:86299067-86299086 MsG0880047437.01.T01:intron 55.0%
TCATTATTGCGCCCTGCCAC+CGG + Chr8:86300260-86300279 None:intergenic 55.0%
TCTTTCCGTGGCTCCATCTG+TGG - Chr8:86297897-86297916 MsG0880047437.01.T01:intron 55.0%
TGAGAGCAACCTATCTCCGG+TGG - Chr8:86300241-86300260 MsG0880047437.01.T01:CDS 55.0%
TGTCACCACAGATGGAGCCA+CGG + Chr8:86297905-86297924 None:intergenic 55.0%
! GAGCCGGTGGCATGATTTTC+CGG + Chr8:86296184-86296203 None:intergenic 55.0%
! TTCTACAAGCGCAGGTGTCG+AGG + Chr8:86299579-86299598 None:intergenic 55.0%
!! AATCATGCCACCGGCTCTGT+TGG - Chr8:86296187-86296206 MsG0880047437.01.T01:CDS 55.0%
!! AATGGCGGATCCAACAGAGC+CGG + Chr8:86296200-86296219 None:intergenic 55.0%
AGCAACCTATCTCCGGTGGC+AGG - Chr8:86300245-86300264 MsG0880047437.01.T01:CDS 60.0%
CCAGTATGGGACCCAGCAAC+AGG + Chr8:86299112-86299131 None:intergenic 60.0%
CCTGTTGCTGGGTCCCATAC+TGG - Chr8:86299109-86299128 MsG0880047437.01.T01:intron 60.0%
GCAACCTATCTCCGGTGGCA+GGG - Chr8:86300246-86300265 MsG0880047437.01.T01:CDS 60.0%
TAGCAGAAACACCGGCAGCG+AGG - Chr8:86300061-86300080 MsG0880047437.01.T01:intron 60.0%
TAGTTTGAGAGGGCGGCTCC+TGG - Chr8:86297076-86297095 MsG0880047437.01.T01:intron 60.0%
TGCAGAGCTGGAGAGGATGG+TGG - Chr8:86297974-86297993 MsG0880047437.01.T01:intron 60.0%
TTGGGTCGGTGAACGCTTGC+CGG - Chr8:86296162-86296181 MsG0880047437.01.T01:CDS 60.0%
!! CGGCACCGGTTCCTGAGAAA+TGG + Chr8:86296261-86296280 None:intergenic 60.0%
!! GCTGGAGAGGATGGTGGATC+AGG - Chr8:86297980-86297999 MsG0880047437.01.T01:intron 60.0%
GGCGGATCCAACAGAGCCGG+TGG + Chr8:86296197-86296216 None:intergenic 70.0%
TGCGCCCTGCCACCGGAGAT+AGG + Chr8:86300253-86300272 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 86295943 86300551 86295943 ID=MsG0880047437.01;Name=MsG0880047437.01
Chr8 mRNA 86295943 86300551 86295943 ID=MsG0880047437.01.T01;Parent=MsG0880047437.01;Name=MsG0880047437.01.T01;_AED=0.27;_eAED=0.29;_QI=248|0|0.25|1|0.66|0.75|4|0|404
Chr8 exon 86295943 86295986 86295943 ID=MsG0880047437.01.T01:exon:17837;Parent=MsG0880047437.01.T01
Chr8 exon 86296132 86296834 86296132 ID=MsG0880047437.01.T01:exon:17836;Parent=MsG0880047437.01.T01
Chr8 exon 86297364 86297620 86297364 ID=MsG0880047437.01.T01:exon:17835;Parent=MsG0880047437.01.T01
Chr8 exon 86300093 86300551 86300093 ID=MsG0880047437.01.T01:exon:17834;Parent=MsG0880047437.01.T01
Chr8 five_prime_UTR 86300304 86300551 86300304 ID=MsG0880047437.01.T01:five_prime_utr;Parent=MsG0880047437.01.T01
Chr8 CDS 86300093 86300303 86300093 ID=MsG0880047437.01.T01:cds;Parent=MsG0880047437.01.T01
Chr8 CDS 86297364 86297620 86297364 ID=MsG0880047437.01.T01:cds;Parent=MsG0880047437.01.T01
Chr8 CDS 86296132 86296834 86296132 ID=MsG0880047437.01.T01:cds;Parent=MsG0880047437.01.T01
Chr8 CDS 86295943 86295986 86295943 ID=MsG0880047437.01.T01:cds;Parent=MsG0880047437.01.T01
Gene Sequence

>MsG0880047437.01.T01

ATGCCACCGGCTCTGTTGGATCCGCCATTGTCAAAAACAGCATCGGTTTCGTCTTTAATCTCCGGCACCATTTCTCAGGAACCGGTGCCGGAGAATCGTTTATTCGATGATCTTAGAGGTTTGCAGTGGCGTATAAATCTCGGGGTTTGCCATCTTCTTCATCTTCTTCCGTTGATGATCTTCGTCGTGCCACCGCTAATTCTCGAAGAAGACTTGACGGATGACGAAATCGGTTCTCACGGAAAAGGAATGAAAATCAAGAGTCTTGATGAGCTTGATCCTAAGATACAGACCATTGTGTTGCTAAGTGATGCTTATGGGGTTGAAGGTGAACTGGGCATTGTTTTATCTGAGAAATTTATTGAGCATGATGCTTACTGTATGTTTGAAGCTTTAATGAATGGGGCTCACGGTTCAGTTGCAATGGCTGATTTTTCTCTTATTCTCCTGTTGCTGGGTCCCATACTGGTTCACCAAACTCCTAAGAGTTTATTACCTGATAATAGCTACTGGGAAGAAAAGTGGAGAGTTGTCCATAGTGCTGAAGAACTTAAACAAGATGGAGTAGAAAAGCAGATTCCATCTCAGAAAAATAGATGGACAGAAAAGGTAAAGTTAAGTTTAAAAAGAACAGTATCTGAACCATCTTCGTCAACAATCAAGAGTGGTAAAAAGGAATCTAAGACATCTGTTAAGCGCAGTTTGTTAGAAGATCTATCCAAGGAACTTGGGTCAGAAGAAGATATAGAAAATCTCGGCTGTCATGAAACATTATGCCAGCAGGATAATCATTCTGTAGCAGTTGAGGCAGAGCAACAAGATGATGGCTCTGACATAAGCAACAATTACGGTGCTGATGATAGATGTCTTAGCAGAAACACCGGCAGCGAGGAAAACTCATTCTGCCTAGCTAGTTCTCCTAATGAGTTCAAATATCATGAAAATGTCTCACAGGAAAGTAGTGTTGGGTCTAATTTATCCCTTGATGAAATTAATGAAATTTCACATAGCAGTCCCATCGATTCACCTCTTCCAATCTCTGATCATCCTGAGAGCAACCTATCTCCGGTGGCAGGGCGCAATAATGATTCCACAGGAAATTCGGCCACACTTTCTAGGAATATAAAACTGAATAAATTCCAATGGCTTTGGAAGTTTGGTCGTAATAATGAATGTGATGGGAACTTTAAAGAATATTGGGCAGTCCATGCTTGA

Protein sequence

>MsG0880047437.01.T01

MPPALLDPPLSKTASVSSLISGTISQEPVPENRLFDDLRGLQWRINLGVCHLLHLLPLMIFVVPPLILEEDLTDDEIGSHGKGMKIKSLDELDPKIQTIVLLSDAYGVEGELGIVLSEKFIEHDAYCMFEALMNGAHGSVAMADFSLILLLLGPILVHQTPKSLLPDNSYWEEKWRVVHSAEELKQDGVEKQIPSQKNRWTEKVKLSLKRTVSEPSSSTIKSGKKESKTSVKRSLLEDLSKELGSEEDIENLGCHETLCQQDNHSVAVEAEQQDDGSDISNNYGADDRCLSRNTGSEENSFCLASSPNEFKYHENVSQESSVGSNLSLDEINEISHSSPIDSPLPISDHPESNLSPVAGRNNDSTGNSATLSRNIKLNKFQWLWKFGRNNECDGNFKEYWAVHA*