AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001842.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001842.01.T01 MTR_1g045370 91.765 85 7 0 1 85 1 85 1.80e-54 168
MsG0180001842.01.T01 MTR_2g437390 59.740 77 31 0 83 159 47 123 1.89e-22 93.6
MsG0180001842.01.T01 MTR_4g119413 59.740 77 31 0 83 159 49 125 2.37e-22 93.6
MsG0180001842.01.T01 MTR_4g119413 59.740 77 31 0 83 159 49 125 3.14e-22 93.2
MsG0180001842.01.T01 MTR_4g119450 59.740 77 31 0 83 159 45 121 3.63e-21 86.3
MsG0180001842.01.T01 MTR_4g119930 67.532 77 25 0 83 159 46 122 7.01e-21 85.5
MsG0180001842.01.T01 MTR_4g119930 67.532 77 25 0 83 159 46 122 1.04e-20 84.3
MsG0180001842.01.T01 MTR_4g119930 68.919 74 23 0 86 159 1 74 1.09e-20 84.0
MsG0180001842.01.T01 MTR_4g119422 66.234 77 26 0 83 159 40 116 4.78e-20 85.9
MsG0180001842.01.T01 MTR_7g108340 53.247 77 36 0 83 159 46 122 2.91e-19 84.7
MsG0180001842.01.T01 MTR_4g119490 67.532 77 25 0 83 159 45 121 5.90e-19 80.5
MsG0180001842.01.T01 MTR_1g073660 56.410 78 30 2 8 81 9 86 6.53e-19 77.0
MsG0180001842.01.T01 MTR_1g073660 55.844 77 30 2 8 80 10 86 5.70e-18 75.1
MsG0180001842.01.T01 MTR_3g115680 47.761 67 35 0 93 159 53 119 9.04e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001842.01.T01 AT4G02570 58.442 77 32 0 83 159 46 122 2.31e-22 93.6
MsG0180001842.01.T01 AT4G02570 58.442 77 32 0 83 159 46 122 2.31e-22 93.6
MsG0180001842.01.T01 AT4G02570 58.442 77 32 0 83 159 46 122 2.31e-22 93.6
MsG0180001842.01.T01 AT4G02570 58.442 77 32 0 83 159 46 122 2.31e-22 93.6
MsG0180001842.01.T01 AT1G59790 45.045 111 44 4 64 159 18 126 6.15e-19 83.2
MsG0180001842.01.T01 AT1G59790 45.045 111 44 4 64 159 18 126 8.43e-19 82.8
MsG0180001842.01.T01 AT1G43140 46.154 78 42 0 82 159 54 131 6.83e-17 77.8
MsG0180001842.01.T01 AT1G02980 44.156 77 43 0 83 159 47 123 2.66e-16 76.3
MsG0180001842.01.T01 AT1G02980 44.156 77 43 0 83 159 47 123 2.66e-16 76.3
MsG0180001842.01.T01 AT2G33390 51.852 54 26 0 27 80 26 79 1.82e-13 63.5
MsG0180001842.01.T01 AT2G33390 41.250 80 46 1 1 80 1 79 2.50e-13 63.2

Find 36 sgRNAs with CRISPR-Local

Find 538 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGGATTCAAAGGGTTCTA+AGG 0.307183 1:+28090098 None:intergenic
CTTGACATACAACCTCTCTT+AGG 0.318227 1:-28090234 None:intergenic
CTGTTTATCCTTCTATTACT+TGG 0.345718 1:+28099625 MsG0180001842.01.T01:CDS
GGTTGTATGTCAAGAAATTC+TGG 0.347453 1:+28090243 MsG0180001842.01.T01:CDS
ACCTGTGGTGGTTTGTGTTA+TGG 0.353770 1:+28090146 MsG0180001842.01.T01:CDS
GAAACTTTATGAGAAGTATA+AGG 0.367606 1:+28098822 MsG0180001842.01.T01:CDS
TTATTGGTATCTAGATTAAT+CGG 0.368659 1:+28100032 MsG0180001842.01.T01:intron
GGAAGGTGAGTCTTCGAATA+TGG 0.379962 1:-28099584 None:intergenic
AATATTGTTGATGGATTCAA+AGG 0.408359 1:+28090089 None:intergenic
ATCACTAACCAAGTAATAGA+AGG 0.418896 1:-28099633 None:intergenic
GGATGGGAAGAATTACATAA+TGG 0.486166 1:+28090119 MsG0180001842.01.T01:CDS
TAGATTAATCGGAAACATGC+AGG 0.492031 1:+28100043 MsG0180001842.01.T01:intron
TAATAGAATTGCTAAGAAGA+TGG 0.503063 1:+28099502 MsG0180001842.01.T01:CDS
GATTCAAAGGGTTCTAAGGA+TGG 0.511601 1:+28090102 MsG0180001842.01.T01:CDS
GAAATTCTGGTAAGACAAGA+AGG 0.514903 1:+28090256 MsG0180001842.01.T01:CDS
CAGCTAGTCTCTTCAAGAGA+AGG 0.526350 1:-28099605 None:intergenic
TAATCAGCTTGCTGAGGTGT+TGG 0.553511 1:+28090305 MsG0180001842.01.T01:CDS
GTGCAGTGGAATGATAAGAA+TGG 0.571058 1:+28090282 MsG0180001842.01.T01:CDS
ATATTGTTGATGGATTCAAA+GGG 0.573735 1:+28090090 None:intergenic
ATTCAAAGGGTTCTAAGGAT+GGG 0.574713 1:+28090103 MsG0180001842.01.T01:CDS
AAAGTTGAAGATCATGTCAA+TGG 0.586470 1:+28090177 MsG0180001842.01.T01:CDS
GACATACAACCTCTCTTAGG+AGG 0.588382 1:-28090231 None:intergenic
TCCATAACACAAACCACCAC+AGG 0.589813 1:-28090147 None:intergenic
CATAATGGATACACCTGTGG+TGG 0.592976 1:+28090134 MsG0180001842.01.T01:CDS
GAGCAGAGGTGCACATATTG+TGG 0.593068 1:-28098780 None:intergenic
TCTTTGTTGCCTCCTAAGAG+AGG 0.596221 1:+28090222 MsG0180001842.01.T01:CDS
TAGTCTCTTCAAGAGAAGGA+AGG 0.619509 1:-28099601 None:intergenic
AAAATAATCACTATGAGCAG+AGG 0.619867 1:-28098794 None:intergenic
AGATTAATCGGAAACATGCA+GGG 0.627094 1:+28100044 MsG0180001842.01.T01:intron
AGACAAGAAGGAAAGTGCAG+TGG 0.661305 1:+28090268 MsG0180001842.01.T01:CDS
GAATGGTAATCAGCTTGCTG+AGG 0.661581 1:+28090299 MsG0180001842.01.T01:CDS
GGAGAACTTATTGATGACAC+TGG 0.663879 1:+28100065 MsG0180001842.01.T01:three_prime_UTR
TGACGTGTACATCAAATCAA+CGG 0.666541 1:+28098852 MsG0180001842.01.T01:CDS
AGGTGTTGGAATATGAACCA+AGG 0.714223 1:+28090319 MsG0180001842.01.T01:CDS
TTACATAATGGATACACCTG+TGG 0.717729 1:+28090131 MsG0180001842.01.T01:CDS
ATCACAAAGATATGACCGCG+AGG 0.750577 1:+28099529 MsG0180001842.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAATGGAATAATAT+TGG - Chr1:28095264-28095283 None:intergenic 10.0%
!! AAAATAATAAATAATTACCT+TGG - Chr1:28090339-28090358 None:intergenic 10.0%
!! AATCAAAAAAAAAAATTTAC+AGG - Chr1:28093185-28093204 None:intergenic 10.0%
!! AATCAAAAAAAAAATTTACA+GGG + Chr1:28093350-28093369 MsG0180001842.01.T01:intron 10.0%
!! ATCAAAAAAAAAAATTTACA+GGG - Chr1:28093184-28093203 None:intergenic 10.0%
!! GATAAAAAAATTTAATATCA+AGG - Chr1:28100007-28100026 None:intergenic 10.0%
!! TATGAAAATAAAATAAAGTT+AGG + Chr1:28098121-28098140 MsG0180001842.01.T01:intron 10.0%
!!! AAAAAAAAATATTTTTACAG+GGG + Chr1:28093323-28093342 MsG0180001842.01.T01:intron 10.0%
!!! AACAAATTAAATCTTTTTTT+TGG - Chr1:28092176-28092195 None:intergenic 10.0%
!!! ATTTTTTTATCTTCATTTAT+TGG + Chr1:28100016-28100035 MsG0180001842.01.T01:intron 10.0%
!!! TATTATACTTTGAAAAATAT+AGG + Chr1:28097545-28097564 MsG0180001842.01.T01:intron 10.0%
!!! TTTTCTTCAATTTTTTTTTT+TGG + Chr1:28095330-28095349 MsG0180001842.01.T01:intron 10.0%
!! AATTAATCAATAATGTAACA+TGG - Chr1:28097363-28097382 None:intergenic 15.0%
!! ATCAAAAAAAAAATTTACAG+GGG + Chr1:28093351-28093370 MsG0180001842.01.T01:intron 15.0%
!! ATTAATCAATAATGTAACAT+GGG - Chr1:28097362-28097381 None:intergenic 15.0%
!! GAATCAAAAAAAAAATTTAC+AGG + Chr1:28093349-28093368 MsG0180001842.01.T01:intron 15.0%
!! TAATAACTTCATTGAAAAAT+AGG + Chr1:28097762-28097781 MsG0180001842.01.T01:intron 15.0%
!! TCCAAAAAATAATCAAATAT+CGG - Chr1:28094131-28094150 None:intergenic 15.0%
!!! AAAAAAAATATTTTTACAGG+GGG + Chr1:28093324-28093343 MsG0180001842.01.T01:intron 15.0%
!!! AAAACAAATTTTTTTTACAG+GGG - Chr1:28093212-28093231 None:intergenic 15.0%
!!! AAATAAAATTGGTTTTTGTT+TGG + Chr1:28093282-28093301 MsG0180001842.01.T01:intron 15.0%
!!! AATTTTCACTATATCTAAAT+CGG - Chr1:28097967-28097986 None:intergenic 15.0%
!!! AGTCTTAATTTAGAAATTTT+TGG + Chr1:28091999-28092018 MsG0180001842.01.T01:intron 15.0%
!!! ATAGTTTTAAATTACAGTTA+CGG - Chr1:28099401-28099420 None:intergenic 15.0%
!!! ATTATTCCATTTTATTTTTC+TGG + Chr1:28095266-28095285 MsG0180001842.01.T01:intron 15.0%
!!! CAAAACAAATTTTTTTTACA+GGG - Chr1:28093213-28093232 None:intergenic 15.0%
!!! CATGTCTTTTTTTTTTTTTT+AGG + Chr1:28095718-28095737 MsG0180001842.01.T01:intron 15.0%
!!! CTTTATTTTATTTTCATACA+CGG - Chr1:28098119-28098138 None:intergenic 15.0%
!!! TCAAAACAAATTTTTTTTAC+AGG - Chr1:28093214-28093233 None:intergenic 15.0%
!!! TTTAAATTAGTTTCAACTTA+TGG + Chr1:28092248-28092267 MsG0180001842.01.T01:intron 15.0%
!!! TTTTTTTTGTATCATAATCT+TGG + Chr1:28098697-28098716 MsG0180001842.01.T01:intron 15.0%
!! AATATATATATGCATTGCAA+TGG + Chr1:28099375-28099394 MsG0180001842.01.T01:intron 20.0%
!! AATGACAAATATTAATTCCA+TGG - Chr1:28096177-28096196 None:intergenic 20.0%
!! AGAAAAATCAAAAAGTCAAA+TGG - Chr1:28092045-28092064 None:intergenic 20.0%
!! AGTGAAATGAATGAATATTA+TGG - Chr1:28099976-28099995 None:intergenic 20.0%
!! ATAAAATGGAATAATATTGG+AGG - Chr1:28095261-28095280 None:intergenic 20.0%
!! ATATATAAGAAACAAAAGTG+TGG - Chr1:28098283-28098302 None:intergenic 20.0%
!! ATGCATCATTAAAGAAATTA+AGG - Chr1:28099928-28099947 None:intergenic 20.0%
!! GAAAAATCAAAAAGTCAAAT+GGG - Chr1:28092044-28092063 None:intergenic 20.0%
!! GAAAAATTAGAGATTATAGA+CGG + Chr1:28099160-28099179 MsG0180001842.01.T01:intron 20.0%
!! GATTATAAGAGAATAGAAAA+CGG - Chr1:28099806-28099825 None:intergenic 20.0%
!! GTAAATAGTTATGCTATTAA+TGG - Chr1:28095961-28095980 None:intergenic 20.0%
!! TACAAATTATCAAAGTAGAA+AGG - Chr1:28091933-28091952 None:intergenic 20.0%
!! TACATCATAAATGTTCAAAA+TGG - Chr1:28090676-28090695 None:intergenic 20.0%
!! TCAAAAAAAAAATTTACAGG+GGG + Chr1:28093352-28093371 MsG0180001842.01.T01:intron 20.0%
!! TGAAAATGATTGTATACATT+TGG + Chr1:28092337-28092356 MsG0180001842.01.T01:intron 20.0%
!! TGACATGATTAAAACTAATA+TGG + Chr1:28099424-28099443 MsG0180001842.01.T01:intron 20.0%
!! TGTAAACAAGTTACTATAAA+AGG - Chr1:28090636-28090655 None:intergenic 20.0%
!! TGTGAATATAAACTTCAATA+TGG - Chr1:28095544-28095563 None:intergenic 20.0%
!! TTAATCAATAATGTAACATG+GGG - Chr1:28097361-28097380 None:intergenic 20.0%
!! TTATTGGTATCTAGATTAAT+CGG + Chr1:28100032-28100051 MsG0180001842.01.T01:intron 20.0%
!! TTCTCTAAATGTATGATATA+AGG - Chr1:28099093-28099112 None:intergenic 20.0%
!! TTTAGAAGTAATCAAATTTG+AGG - Chr1:28098068-28098087 None:intergenic 20.0%
!!! AAAAAAATATTTTTACAGGG+GGG + Chr1:28093325-28093344 MsG0180001842.01.T01:intron 20.0%
!!! AACATTTTGTAATGTTGTTA+AGG + Chr1:28096704-28096723 MsG0180001842.01.T01:intron 20.0%
!!! ACATTTAGAGAATATTTTAC+AGG + Chr1:28099101-28099120 MsG0180001842.01.T01:intron 20.0%
!!! ACCGATATTTGATTATTTTT+TGG + Chr1:28094127-28094146 MsG0180001842.01.T01:intron 20.0%
!!! ACTTATTTGAGTTTATCTAA+TGG + Chr1:28095643-28095662 MsG0180001842.01.T01:intron 20.0%
!!! AGATATAAAATTGATTTCGT+GGG - Chr1:28096304-28096323 None:intergenic 20.0%
!!! ATAGTTTGCAATTGTATTTT+AGG - Chr1:28098242-28098261 None:intergenic 20.0%
!!! ATCATTAATCATTGATTTCA+AGG - Chr1:28097843-28097862 None:intergenic 20.0%
!!! ATGAAACAAAATAATTTGTG+AGG - Chr1:28099067-28099086 None:intergenic 20.0%
!!! ATGCAATATAATGGATTTTA+GGG - Chr1:28091513-28091532 None:intergenic 20.0%
!!! ATGGTTTTAGATTATAGTTA+TGG + Chr1:28091427-28091446 MsG0180001842.01.T01:intron 20.0%
!!! ATTGCTATTAAAAAGAAAGA+AGG + Chr1:28099283-28099302 MsG0180001842.01.T01:intron 20.0%
!!! ATTTATTTTCTCTTAAATCC+AGG + Chr1:28098752-28098771 MsG0180001842.01.T01:intron 20.0%
!!! ATTTGTCATTTGTTTTTAAG+CGG + Chr1:28096187-28096206 MsG0180001842.01.T01:intron 20.0%
!!! CAACTAGTTTTATGTATTTA+CGG - Chr1:28097452-28097471 None:intergenic 20.0%
!!! CAATTAATTTCTGGTATTTT+TGG + Chr1:28096384-28096403 MsG0180001842.01.T01:intron 20.0%
!!! CTTCATTTCACTTTTAATTT+TGG + Chr1:28095851-28095870 MsG0180001842.01.T01:intron 20.0%
!!! CTTTTGTTTCTTATATATCT+AGG + Chr1:28098285-28098304 MsG0180001842.01.T01:intron 20.0%
!!! TAGTTTGCAATTGTATTTTA+GGG - Chr1:28098241-28098260 None:intergenic 20.0%
!!! TGTAAATTAGTTTCAACTTA+TGG + Chr1:28093533-28093552 MsG0180001842.01.T01:intron 20.0%
!!! TTTTCTAAACAATTCGTATT+TGG - Chr1:28090986-28091005 None:intergenic 20.0%
!!! TTTTTTTTTGGTTACAACAT+GGG - Chr1:28097331-28097350 None:intergenic 20.0%
!!! TTTTTTTTTTGGTTACAACA+TGG - Chr1:28097332-28097351 None:intergenic 20.0%
! AAAAGTTTCAACATACTAGA+TGG + Chr1:28092075-28092094 MsG0180001842.01.T01:intron 25.0%
! AAAGTCGAGAATATTATAGA+AGG + Chr1:28098585-28098604 MsG0180001842.01.T01:intron 25.0%
! AAAGTTTCAACATACTAGAT+GGG + Chr1:28092076-28092095 MsG0180001842.01.T01:intron 25.0%
! AACATTGACATTGAATAATG+CGG + Chr1:28098908-28098927 MsG0180001842.01.T01:intron 25.0%
! AACCATAATTCTAATCCAAA+CGG + Chr1:28098011-28098030 MsG0180001842.01.T01:intron 25.0%
! AATGTAATCGTTTGAAGAAA+GGG - Chr1:28096773-28096792 None:intergenic 25.0%
! ACAAAAATAGAAGGGTTAAT+AGG - Chr1:28093415-28093434 None:intergenic 25.0%
! ACATTACAAAATGTTGAGAA+AGG - Chr1:28096699-28096718 None:intergenic 25.0%
! ACCATTCAATTAAGCTTAAA+TGG + Chr1:28090947-28090966 MsG0180001842.01.T01:intron 25.0%
! ACCATTTAAGCTTAATTGAA+TGG - Chr1:28090951-28090970 None:intergenic 25.0%
! ACGAAGTAAACAAAAATAGA+AGG - Chr1:28093424-28093443 None:intergenic 25.0%
! ACTACTATGTTCTAACTTAA+GGG - Chr1:28094025-28094044 None:intergenic 25.0%
! ACTTCTTCAATTTATATTCC+AGG + Chr1:28099728-28099747 MsG0180001842.01.T01:intron 25.0%
! AGGTTTCAGAATATTTACTT+GGG - Chr1:28095494-28095513 None:intergenic 25.0%
! ATGTCAAACATTAAGACTAT+AGG + Chr1:28098523-28098542 MsG0180001842.01.T01:intron 25.0%
! ATTACAAAATGTTGAGAAAG+GGG - Chr1:28096697-28096716 None:intergenic 25.0%
! ATTCCTAAAATTCGAACTTT+GGG - Chr1:28099234-28099253 None:intergenic 25.0%
! CAACAAAAGTTGCAAAAAAA+CGG + Chr1:28099010-28099029 MsG0180001842.01.T01:intron 25.0%
! CATCAACAATAAAAAGTGAT+GGG - Chr1:28097116-28097135 None:intergenic 25.0%
! CATTACAAAATGTTGAGAAA+GGG - Chr1:28096698-28096717 None:intergenic 25.0%
! CATTGAAAAATAGGTTTAAG+CGG + Chr1:28097771-28097790 MsG0180001842.01.T01:intron 25.0%
! CGAAGTAAACAAAAATAGAA+GGG - Chr1:28093423-28093442 None:intergenic 25.0%
! CTAAATTAAGACTAAAGTAC+TGG - Chr1:28091992-28092011 None:intergenic 25.0%
! GAGAGTAAATTCACATAAAA+AGG - Chr1:28095571-28095590 None:intergenic 25.0%
! GTAGAATACTGTCAAAATTA+CGG + Chr1:28091467-28091486 MsG0180001842.01.T01:intron 25.0%
! GTTTATTTATGTGTCTTTAG+AGG + Chr1:28091957-28091976 MsG0180001842.01.T01:intron 25.0%
! TAATAGAATTGCTAAGAAGA+TGG + Chr1:28099502-28099521 MsG0180001842.01.T01:CDS 25.0%
! TAATCAATAATGTAACATGG+GGG - Chr1:28097360-28097379 None:intergenic 25.0%
! TAGGTTTCAGAATATTTACT+TGG - Chr1:28095495-28095514 None:intergenic 25.0%
! TATCATGTGCAATTAATTTC+TGG + Chr1:28096375-28096394 MsG0180001842.01.T01:intron 25.0%
! TATTCAATTCATTGTATACC+TGG - Chr1:28099749-28099768 None:intergenic 25.0%
! TATTCCTAAAATTCGAACTT+TGG - Chr1:28099235-28099254 None:intergenic 25.0%
! TCTTAATAACTATTGTTGCT+TGG + Chr1:28093706-28093725 MsG0180001842.01.T01:intron 25.0%
! TGAATTGAATAGACAAGTAA+TGG + Chr1:28099758-28099777 MsG0180001842.01.T01:intron 25.0%
! TTATGAAAACAATTAGGACA+TGG + Chr1:28092503-28092522 MsG0180001842.01.T01:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + Chr1:28090458-28090477 MsG0180001842.01.T01:intron 25.0%
! TTCTTTATATAACTACTCGA+GGG + Chr1:28091160-28091179 MsG0180001842.01.T01:intron 25.0%
! TTTACAGGATTAGAGATATT+TGG + Chr1:28099116-28099135 MsG0180001842.01.T01:intron 25.0%
! TTTCAAGATGATTTCTTAGA+TGG + Chr1:28095104-28095123 MsG0180001842.01.T01:intron 25.0%
! TTTGGATAAACAGTTTAATG+AGG - Chr1:28092645-28092664 None:intergenic 25.0%
! TTTGTGAATTGATGTTCTAA+TGG + Chr1:28091408-28091427 MsG0180001842.01.T01:intron 25.0%
!! AAACTTTGATTTATGCCATT+AGG + Chr1:28091640-28091659 MsG0180001842.01.T01:intron 25.0%
!! AGGTATTTGTTAGATATAGT+TGG + Chr1:28095913-28095932 MsG0180001842.01.T01:intron 25.0%
!! CTTAATAACTATTGTTGCTT+GGG + Chr1:28093707-28093726 MsG0180001842.01.T01:intron 25.0%
!! GAAACTTTATGAGAAGTATA+AGG + Chr1:28098822-28098841 MsG0180001842.01.T01:CDS 25.0%
!! GAGATATAAAATTGATTTCG+TGG - Chr1:28096305-28096324 None:intergenic 25.0%
!! TATCATAATTTTCTCACATC+TGG + Chr1:28094797-28094816 MsG0180001842.01.T01:intron 25.0%
!! TGATTGTTTCTTAGAATCTT+TGG + Chr1:28094566-28094585 MsG0180001842.01.T01:intron 25.0%
!! TGTTTTACTTTAGTGATATC+AGG + Chr1:28091757-28091776 MsG0180001842.01.T01:intron 25.0%
!! TTGAGCAAATATTTTTCTGT+TGG + Chr1:28092276-28092295 MsG0180001842.01.T01:intron 25.0%
!!! AACCACTTTTTAACAACTTT+TGG - Chr1:28090543-28090562 None:intergenic 25.0%
!!! ACTTTTTGATTTTTCTGTTG+CGG + Chr1:28092049-28092068 MsG0180001842.01.T01:intron 25.0%
!!! AGGATACTTTAGAATTTTGT+AGG + Chr1:28094442-28094461 MsG0180001842.01.T01:intron 25.0%
!!! AGTCACAAATTGTTTTATTC+AGG - Chr1:28091023-28091042 None:intergenic 25.0%
!!! ATAACCATGGTTTTAAATTG+TGG - Chr1:28091556-28091575 None:intergenic 25.0%
!!! ATAGATTTTTTGTTCTGAGA+TGG + Chr1:28095006-28095025 MsG0180001842.01.T01:intron 25.0%
!!! ATTCTGTTTTGTTATGTTCA+TGG + Chr1:28098414-28098433 MsG0180001842.01.T01:intron 25.0%
!!! ATTTAATTTGTTTTACACCC+CGG + Chr1:28092184-28092203 MsG0180001842.01.T01:intron 25.0%
!!! CAAATATCATTTTCTAGAGA+AGG + Chr1:28095893-28095912 MsG0180001842.01.T01:intron 25.0%
!!! CATATATTTTAGCCAAACAA+GGG - Chr1:28097259-28097278 None:intergenic 25.0%
!!! CTTTCTTTTCATTTTTCTTC+AGG + Chr1:28092123-28092142 MsG0180001842.01.T01:intron 25.0%
!!! GATGCAATATAATGGATTTT+AGG - Chr1:28091514-28091533 None:intergenic 25.0%
!!! GTTAATCTTTTTTCTGTTTG+TGG + Chr1:28097727-28097746 MsG0180001842.01.T01:intron 25.0%
!!! GTTATTCGTTTTGAGTTAAT+AGG + Chr1:28093118-28093137 MsG0180001842.01.T01:intron 25.0%
!!! TAACCATGGTTTTAAATTGT+GGG - Chr1:28091555-28091574 None:intergenic 25.0%
!!! TAGATTTTTTGTTCTGAGAT+GGG + Chr1:28095007-28095026 MsG0180001842.01.T01:intron 25.0%
!!! TGGGGGAAATTTTTTTTTTT+TGG - Chr1:28097343-28097362 None:intergenic 25.0%
!!! TTCTGTTTTGTTATGTTCAT+GGG + Chr1:28098415-28098434 MsG0180001842.01.T01:intron 25.0%
!!! TTCTTTTTTTGTTAACCTTC+CGG - Chr1:28091104-28091123 None:intergenic 25.0%
!!! TTTTTATTTACCTCCCTAAT+AGG - Chr1:28093308-28093327 None:intergenic 25.0%
!!! TTTTTTTGCAACTTTTGTTG+TGG - Chr1:28099010-28099029 None:intergenic 25.0%
!!! TTTTTTTTGGTTACAACATG+GGG - Chr1:28097330-28097349 None:intergenic 25.0%
AAAACAATGGAGAGAGAAAA+AGG + Chr1:28090471-28090490 MsG0180001842.01.T01:intron 30.0%
AAAATAATCACTATGAGCAG+AGG - Chr1:28098797-28098816 None:intergenic 30.0%
AAAGTTGAAGATCATGTCAA+TGG + Chr1:28090177-28090196 MsG0180001842.01.T01:CDS 30.0%
AAATGACCTATATTACAAGG+GGG - Chr1:28093150-28093169 None:intergenic 30.0%
AAATTTACAGGGTGTAAAAC+CGG - Chr1:28093173-28093192 None:intergenic 30.0%
AAGACTATAGGTTTAGAAGA+AGG + Chr1:28098535-28098554 MsG0180001842.01.T01:intron 30.0%
AAGAGTGAATATCACATAAC+AGG - Chr1:28092873-28092892 None:intergenic 30.0%
AAGGATGGAATATATTCAAG+AGG + Chr1:28098554-28098573 MsG0180001842.01.T01:intron 30.0%
AAGTATACCCAGAATTAACA+GGG - Chr1:28099712-28099731 None:intergenic 30.0%
AATAAGAAGTGAGAGAAACA+AGG - Chr1:28090446-28090465 None:intergenic 30.0%
AATATGGATTTCTTATCGCT+AGG + Chr1:28099440-28099459 MsG0180001842.01.T01:intron 30.0%
AATATTCTCGACTTTCTTGA+TGG - Chr1:28098580-28098599 None:intergenic 30.0%
AATTTGGATGGACAATTCTA+AGG - Chr1:28096432-28096451 None:intergenic 30.0%
ACAATAGACACCAATTATAG+AGG - Chr1:28096078-28096097 None:intergenic 30.0%
AGACTTGATATAAAGTCCAA+CGG - Chr1:28092384-28092403 None:intergenic 30.0%
AGAGTCATAATGAATTTGGA+TGG - Chr1:28096444-28096463 None:intergenic 30.0%
AGCTGAAGTAAACTTAAAAC+TGG - Chr1:28092212-28092231 None:intergenic 30.0%
AGTAAACTTAAAACTGGAAC+CGG - Chr1:28092206-28092225 None:intergenic 30.0%
ATAATAGATTACAACATGCC+AGG + Chr1:28099325-28099344 MsG0180001842.01.T01:intron 30.0%
ATAATATTGGAGGTAATCAG+TGG - Chr1:28095251-28095270 None:intergenic 30.0%
ATCAACATAACACAGAATGA+TGG - Chr1:28091865-28091884 None:intergenic 30.0%
ATCACTAACCAAGTAATAGA+AGG - Chr1:28099636-28099655 None:intergenic 30.0%
ATCCAAACGCAAATCAAATA+AGG - Chr1:28097482-28097501 None:intergenic 30.0%
ATTAACCCTAAAAGTTTCCT+AGG - Chr1:28097713-28097732 None:intergenic 30.0%
ATTCCTCACCAACTATAAAT+TGG + Chr1:28096141-28096160 MsG0180001842.01.T01:intron 30.0%
CAATGTAATCGTTTGAAGAA+AGG - Chr1:28096774-28096793 None:intergenic 30.0%
CAATTGCAGATGCAATATAA+TGG - Chr1:28091522-28091541 None:intergenic 30.0%
CCATATTTGACAATTTGCAT+GGG + Chr1:28096960-28096979 MsG0180001842.01.T01:intron 30.0%
CGAAAGAGTCATAATGAATT+TGG - Chr1:28096448-28096467 None:intergenic 30.0%
CTACTCACATAATTACTTGT+TGG + Chr1:28092465-28092484 MsG0180001842.01.T01:intron 30.0%
CTATACTCGTATCAAATACA+AGG - Chr1:28097609-28097628 None:intergenic 30.0%
CTGTTTATCCTTCTATTACT+TGG + Chr1:28099625-28099644 MsG0180001842.01.T01:CDS 30.0%
CTTGTAATATAGGTCATTTC+CGG + Chr1:28093151-28093170 MsG0180001842.01.T01:intron 30.0%
GAAATGACCTATATTACAAG+GGG - Chr1:28093151-28093170 None:intergenic 30.0%
GAATCGATGATCACAAATAT+TGG - Chr1:28098398-28098417 None:intergenic 30.0%
GACTACTATGTTCTAACTTA+AGG - Chr1:28094026-28094045 None:intergenic 30.0%
GAGAGCTTATGAAAACAATT+AGG + Chr1:28092497-28092516 MsG0180001842.01.T01:intron 30.0%
GCATCAACAATAAAAAGTGA+TGG - Chr1:28097117-28097136 None:intergenic 30.0%
GGAAATGACCTATATTACAA+GGG - Chr1:28093152-28093171 None:intergenic 30.0%
GTCCAAAAGTTGTTAAAAAG+TGG + Chr1:28090538-28090557 MsG0180001842.01.T01:intron 30.0%
GTGGAACCAGAAAAATAAAA+TGG - Chr1:28095275-28095294 None:intergenic 30.0%
GTTAGCATTATGTTGAAAGT+AGG + Chr1:28096234-28096253 MsG0180001842.01.T01:intron 30.0%
GTTCTTTATATAACTACTCG+AGG + Chr1:28091159-28091178 MsG0180001842.01.T01:intron 30.0%
TAAGTAGGCCAATTTATAGT+TGG - Chr1:28096152-28096171 None:intergenic 30.0%
TAATGGTGCAATATTAGCTA+TGG + Chr1:28099775-28099794 MsG0180001842.01.T01:intron 30.0%
TACACTACAGCATCAAAAAA+GGG - Chr1:28098201-28098220 None:intergenic 30.0%
TACCACATAGTAGTCAATAA+CGG - Chr1:28094334-28094353 None:intergenic 30.0%
TAGAACATAGTAGTCAATCT+CGG + Chr1:28094031-28094050 MsG0180001842.01.T01:intron 30.0%
TATAACAGTATGACAAGTAG+CGG + Chr1:28094102-28094121 MsG0180001842.01.T01:intron 30.0%
TCAAATAAGTCAATCCAAAC+AGG - Chr1:28095633-28095652 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG - Chr1:28090420-28090439 None:intergenic 30.0%
TCGATATCCAAGTTAAATAC+CGG - Chr1:28091353-28091372 None:intergenic 30.0%
TCTCATGTCTACTGATATTT+GGG + Chr1:28095062-28095081 MsG0180001842.01.T01:intron 30.0%
TCTGTTGAAAAAATTGTCTC+TGG + Chr1:28093576-28093595 MsG0180001842.01.T01:intron 30.0%
TGTACATTGGACTTTATCAA+CGG - Chr1:28097063-28097082 None:intergenic 30.0%
TGTTAAGGTGAGATTTAATG+AGG + Chr1:28096719-28096738 MsG0180001842.01.T01:intron 30.0%
TGTTGATGCTGCTATATATT+TGG + Chr1:28097128-28097147 MsG0180001842.01.T01:intron 30.0%
TGTTTATTTCATCAGCAAGT+TGG - Chr1:28096028-28096047 None:intergenic 30.0%
TTAAAACCATGGTTATGCTA+AGG + Chr1:28091560-28091579 MsG0180001842.01.T01:intron 30.0%
TTAACCCTAAAAGTTTCCTA+GGG - Chr1:28097712-28097731 None:intergenic 30.0%
TTACTTCCAGCAATATGATT+CGG + Chr1:28095166-28095185 MsG0180001842.01.T01:intron 30.0%
TTATATTGCATCTGCAATTG+CGG + Chr1:28091522-28091541 MsG0180001842.01.T01:intron 30.0%
TTATCATTTCTACGTGAACT+TGG - Chr1:28091826-28091845 None:intergenic 30.0%
TTCCATAGAACTTGACAATA+AGG - Chr1:28097169-28097188 None:intergenic 30.0%
TTCTTCAAACGATTACATTG+AGG + Chr1:28096774-28096793 MsG0180001842.01.T01:intron 30.0%
TTGAAGAAGAAGCAAAAAGA+CGG - Chr1:28098335-28098354 None:intergenic 30.0%
TTGCTGACACTTCTAATTAA+GGG + Chr1:28090698-28090717 MsG0180001842.01.T01:intron 30.0%
TTGCTGATGAAATAAACAAC+AGG + Chr1:28096030-28096049 MsG0180001842.01.T01:intron 30.0%
TTTGCTGACACTTCTAATTA+AGG + Chr1:28090697-28090716 MsG0180001842.01.T01:intron 30.0%
! AAAATCTTGCACAAGTTTTG+AGG + Chr1:28097871-28097890 MsG0180001842.01.T01:intron 30.0%
! AAAATTGATTTCGTGGGTTA+GGG - Chr1:28096298-28096317 None:intergenic 30.0%
! AAACAAAAGTGTGGTTATCA+TGG - Chr1:28098274-28098293 None:intergenic 30.0%
! AAACCCACAATTTAAAACCA+TGG + Chr1:28091549-28091568 MsG0180001842.01.T01:intron 30.0%
! AAAGTATCCTCAAATCCTAT+TGG - Chr1:28094432-28094451 None:intergenic 30.0%
! AACAAAAGTGTGGTTATCAT+GGG - Chr1:28098273-28098292 None:intergenic 30.0%
! AATTACTTGTTGGACTGTTT+GGG + Chr1:28092475-28092494 MsG0180001842.01.T01:intron 30.0%
! AGAAGATTAGTTAGCAAACA+AGG - Chr1:28092831-28092850 None:intergenic 30.0%
! AGAAGCGTAATTGAATAAAG+AGG - Chr1:28096519-28096538 None:intergenic 30.0%
! ATGATTTCTTAGATGGACTT+TGG + Chr1:28095111-28095130 MsG0180001842.01.T01:intron 30.0%
! ATTAATTCCATGGACTAAGT+AGG - Chr1:28096167-28096186 None:intergenic 30.0%
! CAATCATTTTCAACTGAAAC+AGG - Chr1:28092329-28092348 None:intergenic 30.0%
! TAAAATTGATTTCGTGGGTT+AGG - Chr1:28096299-28096318 None:intergenic 30.0%
! TAATTACTTGTTGGACTGTT+TGG + Chr1:28092474-28092493 MsG0180001842.01.T01:intron 30.0%
! TGATTTCTTAGATGGACTTT+GGG + Chr1:28095112-28095131 MsG0180001842.01.T01:intron 30.0%
! TTCCGTTTGGATTAGAATTA+TGG - Chr1:28098016-28098035 None:intergenic 30.0%
! TTGTTTCTCTCACTTCTTAT+TGG + Chr1:28090445-28090464 MsG0180001842.01.T01:intron 30.0%
! TTTTTACCCCCTTGTAATAT+AGG + Chr1:28093141-28093160 MsG0180001842.01.T01:intron 30.0%
!! AACCTTATTTGATTTGCGTT+TGG + Chr1:28097477-28097496 MsG0180001842.01.T01:intron 30.0%
!! AAGAGAATTTTGGTCATGTT+TGG - Chr1:28092663-28092682 None:intergenic 30.0%
!! ATGCAAGTTCTACTTTTGTA+GGG + Chr1:28092742-28092761 MsG0180001842.01.T01:intron 30.0%
!! ATTGGTACTTGCTATGTATA+TGG + Chr1:28091380-28091399 MsG0180001842.01.T01:intron 30.0%
!! ATTTAACTTGGATATCGACT+TGG + Chr1:28091355-28091374 MsG0180001842.01.T01:intron 30.0%
!! CGTTTTTGTTTAGCCTATTA+GGG - Chr1:28093244-28093263 None:intergenic 30.0%
!! GTTTTTGTTTAGCCTATTAG+GGG - Chr1:28093243-28093262 None:intergenic 30.0%
!! TATGCAAGTTCTACTTTTGT+AGG + Chr1:28092741-28092760 MsG0180001842.01.T01:intron 30.0%
!! TCGTTTTTGTTTAGCCTATT+AGG - Chr1:28093245-28093264 None:intergenic 30.0%
!! TTTTTATCTTGGAGTGCTTA+CGG - Chr1:28092529-28092548 None:intergenic 30.0%
!! TTTTTGTTTAGCCTATTAGG+GGG - Chr1:28093242-28093261 None:intergenic 30.0%
!!! AGATTTTAGTTCAGACCTAA+TGG - Chr1:28091658-28091677 None:intergenic 30.0%
!!! AGATTTTTTGTTCTGAGATG+GGG + Chr1:28095008-28095027 MsG0180001842.01.T01:intron 30.0%
!!! CAAGGACACACTTTTTTTTA+GGG - Chr1:28097093-28097112 None:intergenic 30.0%
!!! GCATATATTTTAGCCAAACA+AGG - Chr1:28097260-28097279 None:intergenic 30.0%
!!! GCTATAAGCTGTTTTTATCT+TGG - Chr1:28092540-28092559 None:intergenic 30.0%
!!! GCTATTAGCTGTTTTTATCT+TGG - Chr1:28093878-28093897 None:intergenic 30.0%
!!! TTTTGCCTCTGAAATTTTCT+TGG + Chr1:28093999-28094018 MsG0180001842.01.T01:intron 30.0%
!!! TTTTTTGATGCTGTAGTGTA+GGG + Chr1:28098201-28098220 MsG0180001842.01.T01:intron 30.0%
!!! TTTTTTTGGTTACAACATGG+GGG - Chr1:28097329-28097348 None:intergenic 30.0%
AAAATTTACAGGGGGAAAAC+CGG + Chr1:28093360-28093379 MsG0180001842.01.T01:intron 35.0%
AAAGTCTCCTCAAATCCTAT+TGG - Chr1:28092785-28092804 None:intergenic 35.0%
AAATACAGAATCCACAGTTG+AGG - Chr1:28096813-28096832 None:intergenic 35.0%
AAATGACCTATATTACAGGG+GGG + Chr1:28093383-28093402 MsG0180001842.01.T01:intron 35.0%
AACGGTAATTCATGTGTAGT+CGG - Chr1:28097417-28097436 None:intergenic 35.0%
AACTAGACTACTCTACCTTA+AGG - Chr1:28092708-28092727 None:intergenic 35.0%
AAGACTTGATATGAAGTCCA+AGG - Chr1:28093751-28093770 None:intergenic 35.0%
AATACAGAATCCACAGTTGA+GGG - Chr1:28096812-28096831 None:intergenic 35.0%
ACAATAAAAGTCCACTCACT+AGG + Chr1:28098154-28098173 MsG0180001842.01.T01:intron 35.0%
ACACCAATTATAGAGGAACA+TGG - Chr1:28096071-28096090 None:intergenic 35.0%
ACTAAAATCTCAGCAGAAGT+TGG + Chr1:28091668-28091687 MsG0180001842.01.T01:intron 35.0%
ACTAGACTACTCTACCTTAA+GGG - Chr1:28092707-28092726 None:intergenic 35.0%
AGAATTAACAGGGGAAAAAG+AGG - Chr1:28099702-28099721 None:intergenic 35.0%
AGACTTGATATGAAGTCCAA+GGG - Chr1:28093750-28093769 None:intergenic 35.0%
AGATTAATCGGAAACATGCA+GGG + Chr1:28100044-28100063 MsG0180001842.01.T01:intron 35.0%
AGATTATAGTTATGGTGCGA+AGG + Chr1:28091435-28091454 MsG0180001842.01.T01:intron 35.0%
AGGTAGAGTAGTCTAGTTAT+AGG + Chr1:28092710-28092729 MsG0180001842.01.T01:intron 35.0%
AGTATACCCAGAATTAACAG+GGG - Chr1:28099711-28099730 None:intergenic 35.0%
ATAATCACAAGTGTCAGTGT+CGG - Chr1:28090735-28090754 None:intergenic 35.0%
ATCATGTTCTGTCTCTAACT+TGG - Chr1:28094988-28095007 None:intergenic 35.0%
ATGATAAGCTGATAGGACTT+TGG + Chr1:28091839-28091858 MsG0180001842.01.T01:intron 35.0%
ATTGTACAGAACAAGTTTGC+AGG + Chr1:28095295-28095314 MsG0180001842.01.T01:intron 35.0%
ATTGTGAGCACATTACTTTG+TGG - Chr1:28094729-28094748 None:intergenic 35.0%
CAAATATCAGTAGACATGAG+AGG - Chr1:28095063-28095082 None:intergenic 35.0%
CAGAGCTTATGTAACAACTT+AGG + Chr1:28093835-28093854 MsG0180001842.01.T01:intron 35.0%
CATCCATGTTCCTCTATAAT+TGG + Chr1:28096065-28096084 MsG0180001842.01.T01:intron 35.0%
CCCATGCAAATTGTCAAATA+TGG - Chr1:28096963-28096982 None:intergenic 35.0%
CCTGTAATATAGGTCATTTC+CGG - Chr1:28093382-28093401 None:intergenic 35.0%
CGGAAATGACCTATATTACA+AGG - Chr1:28093399-28093380 None:intergenic 35.0%
CGGAAATGACCTATATTACA+GGG + Chr1:28093380-28093399 MsG0180001842.01.T01:intron 35.0%
CGTAGAAATGATAAGCTGAT+AGG + Chr1:28091832-28091851 MsG0180001842.01.T01:intron 35.0%
CTACACTACAGCATCAAAAA+AGG - Chr1:28098202-28098221 None:intergenic 35.0%
CTATAGGTTTAGAAGAAGGA+TGG + Chr1:28098539-28098558 MsG0180001842.01.T01:intron 35.0%
CTCTAACTTGGTCAAATTCA+GGG - Chr1:28094976-28094995 None:intergenic 35.0%
CTCTCATGTCTACTGATATT+TGG + Chr1:28095061-28095080 MsG0180001842.01.T01:intron 35.0%
CTCTTTGATAGACATCCAAT+AGG + Chr1:28092767-28092786 MsG0180001842.01.T01:intron 35.0%
CTTATGTTGTGTAACTGTCT+AGG + Chr1:28095600-28095619 MsG0180001842.01.T01:intron 35.0%
CTTTGCTCTGACTTTAATTG+GGG + Chr1:28091290-28091309 MsG0180001842.01.T01:intron 35.0%
GAAATGACCTATATTACAGG+GGG + Chr1:28093382-28093401 MsG0180001842.01.T01:intron 35.0%
GAAATTCTGGTAAGACAAGA+AGG + Chr1:28090256-28090275 MsG0180001842.01.T01:CDS 35.0%
GAAGTATACCCAGAATTAAC+AGG - Chr1:28099713-28099732 None:intergenic 35.0%
GAATAAGTCGGTGAAATCTT+TGG + Chr1:28091617-28091636 MsG0180001842.01.T01:intron 35.0%
GACCCAAATAATCCAAAGTT+CGG - Chr1:28091066-28091085 None:intergenic 35.0%
GCCATATTTGACAATTTGCA+TGG + Chr1:28096959-28096978 MsG0180001842.01.T01:intron 35.0%
GCTTTGCTCTGACTTTAATT+GGG + Chr1:28091289-28091308 MsG0180001842.01.T01:intron 35.0%
GGAAATGACCTATATTACAG+GGG + Chr1:28093381-28093400 MsG0180001842.01.T01:intron 35.0%
GGATGGGAAGAATTACATAA+TGG + Chr1:28090119-28090138 MsG0180001842.01.T01:CDS 35.0%
GGTAGAGTAGTCTAGTTATA+GGG + Chr1:28092711-28092730 MsG0180001842.01.T01:intron 35.0%
GGTGAGATTTAATGAGGTAT+TGG + Chr1:28096725-28096744 MsG0180001842.01.T01:intron 35.0%
GGTTGTATGTCAAGAAATTC+TGG + Chr1:28090243-28090262 MsG0180001842.01.T01:CDS 35.0%
GTAAACTTAAAACTGGAACC+GGG - Chr1:28092205-28092224 None:intergenic 35.0%
GTAGAGTAGTCTAGTTATAG+GGG + Chr1:28092712-28092731 MsG0180001842.01.T01:intron 35.0%
TAAACTTAAAACTGGAACCG+GGG - Chr1:28092204-28092223 None:intergenic 35.0%
TAGACATCCAATAGGATTTG+AGG + Chr1:28092775-28092794 MsG0180001842.01.T01:intron 35.0%
TAGAGATTATAGACGGTGAT+GGG + Chr1:28099167-28099186 MsG0180001842.01.T01:intron 35.0%
TAGATTAATCGGAAACATGC+AGG + Chr1:28100043-28100062 MsG0180001842.01.T01:intron 35.0%
TAGTTATAGTCGTGTCTTTG+AGG + Chr1:28094362-28094381 MsG0180001842.01.T01:intron 35.0%
TCAACATACTAGATGAGAAC+TGG + Chr1:28092082-28092101 MsG0180001842.01.T01:intron 35.0%
TCTCTAACTTGGTCAAATTC+AGG - Chr1:28094977-28094996 None:intergenic 35.0%
TCTGTTGGAAAAATTGTCTC+TGG + Chr1:28092291-28092310 MsG0180001842.01.T01:intron 35.0%
TGACGTGTACATCAAATCAA+CGG + Chr1:28098852-28098871 MsG0180001842.01.T01:CDS 35.0%
TGATCTTGAGATGTGAAGTT+AGG - Chr1:28098621-28098640 None:intergenic 35.0%
TTAAAGCTGCGATACTTTGT+TGG - Chr1:28097643-28097662 None:intergenic 35.0%
TTAGAGATTATAGACGGTGA+TGG + Chr1:28099166-28099185 MsG0180001842.01.T01:intron 35.0%
TTAGGGAAGGTTATGTACAT+TGG - Chr1:28097076-28097095 None:intergenic 35.0%
TTGACATTGAATAATGCGGT+TGG + Chr1:28098912-28098931 MsG0180001842.01.T01:intron 35.0%
TTTATACCTTGTCATTCCCT+TGG + Chr1:28093731-28093750 MsG0180001842.01.T01:intron 35.0%
! AAGCCCAAAGTTCGAATTTT+AGG + Chr1:28099228-28099247 MsG0180001842.01.T01:intron 35.0%
! AATCACCCTAGGAAACTTTT+AGG + Chr1:28097704-28097723 MsG0180001842.01.T01:intron 35.0%
! ACAAAAGTGTGGTTATCATG+GGG - Chr1:28098272-28098291 None:intergenic 35.0%
! ATCACCCTAGGAAACTTTTA+GGG + Chr1:28097705-28097724 MsG0180001842.01.T01:intron 35.0%
! CAAACTTGTTCTGTACAATG+TGG - Chr1:28095294-28095313 None:intergenic 35.0%
! CTAGTGACATTGTTACTTGT+TGG + Chr1:28093803-28093822 MsG0180001842.01.T01:intron 35.0%
! CTTCGTTTTCATTCTTCTTC+AGG + Chr1:28093438-28093457 MsG0180001842.01.T01:intron 35.0%
! CTTTTTCCCCTGTTAATTCT+GGG + Chr1:28099702-28099721 MsG0180001842.01.T01:intron 35.0%
! TAGTAGACTCGAAAAAGCAT+CGG + Chr1:28097229-28097248 MsG0180001842.01.T01:intron 35.0%
! TCACAGGGAAAAGAGAATTT+TGG - Chr1:28092673-28092692 None:intergenic 35.0%
! TCAGAGGCAAAAGAGAATTT+TGG - Chr1:28093991-28094010 None:intergenic 35.0%
! TCTTTTTCCCCTGTTAATTC+TGG + Chr1:28099701-28099720 MsG0180001842.01.T01:intron 35.0%
! TGCCTTATTGTCAAGTTCTA+TGG + Chr1:28097164-28097183 MsG0180001842.01.T01:intron 35.0%
! TTGTCAACAGATAGTGTTGA+TGG + Chr1:28096094-28096113 MsG0180001842.01.T01:intron 35.0%
! TTGTTACTTGTTGGACTGTT+TGG + Chr1:28093812-28093831 MsG0180001842.01.T01:intron 35.0%
! TTTTACAGCATCAGTAGATG+TGG - Chr1:28095218-28095237 None:intergenic 35.0%
! TTTTCCCTGTGAAGTTTTCT+TGG + Chr1:28092681-28092700 MsG0180001842.01.T01:intron 35.0%
!! ACAATAAAAAGTGATGGGCA+AGG - Chr1:28097111-28097130 None:intergenic 35.0%
!! AGTGAGAGTTTATTTTCTCC+TGG - Chr1:28099346-28099365 None:intergenic 35.0%
!! ATTCAAAGGGTTCTAAGGAT+GGG + Chr1:28090103-28090122 MsG0180001842.01.T01:CDS 35.0%
!! ATTTCACCGACTTATTCAAG+AGG - Chr1:28091614-28091633 None:intergenic 35.0%
!! GGTTTTTGTTTGGCCTATTA+GGG + Chr1:28093292-28093311 MsG0180001842.01.T01:intron 35.0%
!! TATTCCGCTATCCTACTTTT+GGG - Chr1:28094079-28094098 None:intergenic 35.0%
!! TGGTTTTTGTTTGGCCTATT+AGG + Chr1:28093291-28093310 MsG0180001842.01.T01:intron 35.0%
!! TTACATAATGGATACACCTG+TGG + Chr1:28090131-28090150 MsG0180001842.01.T01:CDS 35.0%
!! TTGGATATCGACTTGGTTAT+TGG + Chr1:28091362-28091381 MsG0180001842.01.T01:intron 35.0%
!! TTTTGTTTAGCCTATTAGGG+GGG - Chr1:28093241-28093260 None:intergenic 35.0%
!!! CTGGCTATGTTTTTTTGAAG+AGG + Chr1:28093595-28093614 MsG0180001842.01.T01:intron 35.0%
!!! CTTTTTTGATGCTGTAGTGT+AGG + Chr1:28098200-28098219 MsG0180001842.01.T01:intron 35.0%
!!! GACACACTTTTTTTTAGGGA+AGG - Chr1:28097089-28097108 None:intergenic 35.0%
!!! GCAAGGACACACTTTTTTTT+AGG - Chr1:28097094-28097113 None:intergenic 35.0%
!!! TTTTGATTTACCCCCCTAAT+AGG + Chr1:28093228-28093247 MsG0180001842.01.T01:intron 35.0%
!!! TTTTTTTGAAGAGGTGTCTC+TGG + Chr1:28093604-28093623 MsG0180001842.01.T01:intron 35.0%
AAATAATCCAAAGTTCGGCC+AGG - Chr1:28091061-28091080 None:intergenic 40.0%
AACTTGGTCAAATTCAGGGT+TGG - Chr1:28094972-28094991 None:intergenic 40.0%
AAGAAAGGGAGTTAGAGTTG+AGG - Chr1:28096759-28096778 None:intergenic 40.0%
AAGGGCCAAGAAAATTTCAG+AGG - Chr1:28094007-28094026 None:intergenic 40.0%
AATCGTAGTGATAAGAGAGG+CGG - Chr1:28098375-28098394 None:intergenic 40.0%
ACAGCATCAAAAAAGGGAGT+GGG - Chr1:28098195-28098214 None:intergenic 40.0%
ACATCACTGCACACACAAAT+GGG - Chr1:28094826-28094845 None:intergenic 40.0%
ACTATTCATACCGACCAAAG+TGG + Chr1:28096918-28096937 MsG0180001842.01.T01:intron 40.0%
ACTCTCTGCTGGATTATTCA+GGG + Chr1:28094931-28094950 MsG0180001842.01.T01:intron 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + Chr1:28090481-28090500 MsG0180001842.01.T01:intron 40.0%
AGCAGAAGTTGGCTATAGTT+AGG + Chr1:28091679-28091698 MsG0180001842.01.T01:intron 40.0%
AGCTGCAAGTATTAATGCTC+GGG - Chr1:28094689-28094708 None:intergenic 40.0%
CCGGAAATGACCTATATTAC+AGG + Chr1:28093379-28093398 MsG0180001842.01.T01:intron 40.0%
CTTGACATACAACCTCTCTT+AGG - Chr1:28090237-28090256 None:intergenic 40.0%
GAGCTGCAAGTATTAATGCT+CGG - Chr1:28094690-28094709 None:intergenic 40.0%
GAGTCTCCTCTTGAATAAGT+CGG + Chr1:28091605-28091624 MsG0180001842.01.T01:intron 40.0%
GGCCGAACTTTGGATTATTT+GGG + Chr1:28091061-28091080 MsG0180001842.01.T01:intron 40.0%
GGCTTTGCTCTGACTTTAAT+TGG + Chr1:28091288-28091307 MsG0180001842.01.T01:intron 40.0%
GGGGAGTTAAGGAGATAAAA+AGG - Chr1:28096273-28096292 None:intergenic 40.0%
GTATGACCTTAGCATAACCA+TGG - Chr1:28091569-28091588 None:intergenic 40.0%
GTCTAGGAAAATAGCCTGTT+TGG + Chr1:28095616-28095635 MsG0180001842.01.T01:intron 40.0%
GTGCAGTGGAATGATAAGAA+TGG + Chr1:28090282-28090301 MsG0180001842.01.T01:CDS 40.0%
TACAGCATCAAAAAAGGGAG+TGG - Chr1:28098196-28098215 None:intergenic 40.0%
TACTCTCTGCTGGATTATTC+AGG + Chr1:28094930-28094949 MsG0180001842.01.T01:intron 40.0%
TAGTCTCTTCAAGAGAAGGA+AGG - Chr1:28099604-28099623 None:intergenic 40.0%
TATATGCGAATTGCGACTAG+TGG + Chr1:28097273-28097292 MsG0180001842.01.T01:intron 40.0%
TCAAGACAAAACCTAGTGAG+TGG - Chr1:28098168-28098187 None:intergenic 40.0%
TCTAAACCTACACTCCTCAT+TGG - Chr1:28096487-28096506 None:intergenic 40.0%
TCTTTACCCCCCTGTAATAT+AGG - Chr1:28093392-28093411 None:intergenic 40.0%
TGAGATGTGAAGTTAGGTTC+AGG - Chr1:28098615-28098634 None:intergenic 40.0%
TGAGCAAATACAATCACCCT+AGG + Chr1:28097693-28097712 MsG0180001842.01.T01:intron 40.0%
TGGAATCGTAGTGATAAGAG+AGG - Chr1:28098378-28098397 None:intergenic 40.0%
TGGCCGAACTTTGGATTATT+TGG + Chr1:28091060-28091079 MsG0180001842.01.T01:intron 40.0%
TGTAGTTGTCTCTTTCCGTT+TGG - Chr1:28098029-28098048 None:intergenic 40.0%
TTACAATCAAACCGCACTTG+TGG - Chr1:28098962-28098981 None:intergenic 40.0%
TTACGGTGCAATGAAGACAA+CGG - Chr1:28097435-28097454 None:intergenic 40.0%
TTTGTTAACCTTCCGGTTCT+CGG - Chr1:28091097-28091116 None:intergenic 40.0%
! AAATTGGCCTACTTAGTCCA+TGG + Chr1:28096157-28096176 MsG0180001842.01.T01:intron 40.0%
! AAGTTAAATACCGGCTAACC+CGG - Chr1:28091344-28091363 None:intergenic 40.0%
! AATGAGGAGTGTAGGTTTAG+AGG + Chr1:28096486-28096505 MsG0180001842.01.T01:intron 40.0%
! AGCACATGTTCTAAACTAGG+TGG - Chr1:28090917-28090936 None:intergenic 40.0%
! AGGCCAATTTATAGTTGGTG+AGG - Chr1:28096147-28096166 None:intergenic 40.0%
! ATGCTGTAGTGTAGGGTTTT+AGG + Chr1:28098208-28098227 MsG0180001842.01.T01:intron 40.0%
! ATTAGTTCTCCCTCATTGAG+GGG + Chr1:28096989-28097008 MsG0180001842.01.T01:intron 40.0%
! CACTTTATGTCATGCCACTT+TGG - Chr1:28096935-28096954 None:intergenic 40.0%
! CATTAGTTCTCCCTCATTGA+GGG + Chr1:28096988-28097007 MsG0180001842.01.T01:intron 40.0%
! CGATACTTTGTTGGAAGTGT+CGG - Chr1:28097634-28097653 None:intergenic 40.0%
! CTATTCCGCTATCCTACTTT+TGG - Chr1:28094080-28094099 None:intergenic 40.0%
! GAGAGCACATGTTCTAAACT+AGG - Chr1:28090920-28090939 None:intergenic 40.0%
! GATTATTCAGGGGCACAATA+TGG + Chr1:28094942-28094961 MsG0180001842.01.T01:intron 40.0%
! GCTGCTATATATTTGGAGTG+TGG + Chr1:28097135-28097154 MsG0180001842.01.T01:intron 40.0%
! GCTTTCTTTTCTCGCAAAGA+TGG - Chr1:28099471-28099490 None:intergenic 40.0%
! GGAGAACTTATTGATGACAC+TGG + Chr1:28100065-28100084 MsG0180001842.01.T01:three_prime_UTR 40.0%
! TCATTAGTTCTCCCTCATTG+AGG + Chr1:28096987-28097006 MsG0180001842.01.T01:intron 40.0%
! TGAAGTTTTCTTGGCCCTTA+AGG + Chr1:28092690-28092709 MsG0180001842.01.T01:intron 40.0%
! TTGGATGGACAATTCTAAGG+AGG - Chr1:28096429-28096448 None:intergenic 40.0%
! TTTCTTAGATGGACTTTGGG+AGG + Chr1:28095115-28095134 MsG0180001842.01.T01:intron 40.0%
!! ACTTCTAATTAAGGGTGTCC+AGG + Chr1:28090706-28090725 MsG0180001842.01.T01:intron 40.0%
!! AGGTGTTGGAATATGAACCA+AGG + Chr1:28090319-28090338 MsG0180001842.01.T01:CDS 40.0%
!! ATTCCGCTATCCTACTTTTG+GGG - Chr1:28094078-28094097 None:intergenic 40.0%
!! GATTCAAAGGGTTCTAAGGA+TGG + Chr1:28090102-28090121 MsG0180001842.01.T01:CDS 40.0%
!! GCAAATAGTGTCGATTGTTC+AGG - Chr1:28094760-28094779 None:intergenic 40.0%
!! TCACTAGGTTTTGTCTTGAG+AGG + Chr1:28098169-28098188 MsG0180001842.01.T01:intron 40.0%
!! TTATGTCATGCCACTTTGGT+CGG - Chr1:28096931-28096950 None:intergenic 40.0%
!! TTTTGTTTGGCCTATTAGGG+AGG + Chr1:28093295-28093314 MsG0180001842.01.T01:intron 40.0%
AAAAAGACGGCACGTGCAAA+AGG - Chr1:28098322-28098341 None:intergenic 45.0%
AAGGGCCAAGAAAACTTCAC+AGG - Chr1:28092689-28092708 None:intergenic 45.0%
ACACACTAAGTGCGGAGAAT+AGG + Chr1:28095381-28095400 MsG0180001842.01.T01:intron 45.0%
ACTTGACTTTGCTTACCTCC+TGG + Chr1:28091040-28091059 MsG0180001842.01.T01:intron 45.0%
AGATGTGCAAACAGCACACA+AGG - Chr1:28095520-28095539 None:intergenic 45.0%
AGGGCCAAGAAAACTTCACA+GGG - Chr1:28092688-28092707 None:intergenic 45.0%
ATCACAAAGATATGACCGCG+AGG + Chr1:28099529-28099548 MsG0180001842.01.T01:CDS 45.0%
ATCGTAGTGATAAGAGAGGC+GGG - Chr1:28098374-28098393 None:intergenic 45.0%
CAATCTCATTGTCCGCTAGT+GGG - Chr1:28091316-28091335 None:intergenic 45.0%
CACACTAAGTGCGGAGAATA+GGG + Chr1:28095382-28095401 MsG0180001842.01.T01:intron 45.0%
CACTACGACGATTACTGTAG+CGG + Chr1:28094281-28094300 MsG0180001842.01.T01:intron 45.0%
CACTGTCCGAATCATATTGC+TGG - Chr1:28095175-28095194 None:intergenic 45.0%
CTCTCTGCTGGATTATTCAG+GGG + Chr1:28094932-28094951 MsG0180001842.01.T01:intron 45.0%
GAAAAACTTCAAGAGCCTCG+CGG - Chr1:28099547-28099566 None:intergenic 45.0%
GACATACAACCTCTCTTAGG+AGG - Chr1:28090234-28090253 None:intergenic 45.0%
GACATCACTGCACACACAAA+TGG - Chr1:28094827-28094846 None:intergenic 45.0%
GAGTAGTCTAGTTATAGGGG+TGG + Chr1:28092715-28092734 MsG0180001842.01.T01:intron 45.0%
GCACATATTGTGGATGATCC+TGG - Chr1:28098773-28098792 None:intergenic 45.0%
GGAAGGTGAGTCTTCGAATA+TGG - Chr1:28099587-28099606 None:intergenic 45.0%
GGTGAGGAATCACATGATAG+AGG - Chr1:28096131-28096150 None:intergenic 45.0%
GTGTTGAGTCAGCCTATGTA+GGG + Chr1:28091267-28091286 MsG0180001842.01.T01:intron 45.0%
TAATGACCGACCCCAAAAGT+AGG + Chr1:28094065-28094084 MsG0180001842.01.T01:intron 45.0%
TATGGTGCGAAGGCAAATTG+CGG + Chr1:28091445-28091464 MsG0180001842.01.T01:intron 45.0%
TCAACGGATCATGTGTGAAG+TGG - Chr1:28097047-28097066 None:intergenic 45.0%
TCCATAACACAAACCACCAC+AGG - Chr1:28090150-28090169 None:intergenic 45.0%
TCTTTGTTGCCTCCTAAGAG+AGG + Chr1:28090222-28090241 MsG0180001842.01.T01:CDS 45.0%
TGAAGTCCAAGGGAATGACA+AGG - Chr1:28093740-28093759 None:intergenic 45.0%
TGCCGTGGTTATTGGACTAT+CGG - Chr1:28095035-28095054 None:intergenic 45.0%
TGGGAGGAATTCTCAGATGT+AGG + Chr1:28095131-28095150 MsG0180001842.01.T01:intron 45.0%
TGTGTTGAGTCAGCCTATGT+AGG + Chr1:28091266-28091285 MsG0180001842.01.T01:intron 45.0%
TTACGGCTGTGATGTCATTG+TGG + Chr1:28091484-28091503 MsG0180001842.01.T01:intron 45.0%
TTGTTAACCTTCCGGTTCTC+GGG - Chr1:28091096-28091115 None:intergenic 45.0%
! AAAGGGTGTGGTGACATTTG+AGG - Chr1:28095424-28095443 None:intergenic 45.0%
! AAGGGTGTGGTGACATTTGA+GGG - Chr1:28095423-28095442 None:intergenic 45.0%
! ACCTGTGGTGGTTTGTGTTA+TGG + Chr1:28090146-28090165 MsG0180001842.01.T01:CDS 45.0%
! AGACAAGAAGGAAAGTGCAG+TGG + Chr1:28090268-28090287 MsG0180001842.01.T01:CDS 45.0%
! AGTTAAATACCGGCTAACCC+GGG - Chr1:28091343-28091362 None:intergenic 45.0%
! CAACTGATGTGTCATTCCGT+TGG + Chr1:28092365-28092384 MsG0180001842.01.T01:intron 45.0%
! CAGCTAGTCTCTTCAAGAGA+AGG - Chr1:28099608-28099627 None:intergenic 45.0%
! CTAGAGAAGAGCACACTCTT+GGG - Chr1:28091210-28091229 None:intergenic 45.0%
! GATGGACAATTCTAAGGAGG+AGG - Chr1:28096426-28096445 None:intergenic 45.0%
! GGCCGTTATTGACTACTATG+TGG + Chr1:28094329-28094348 MsG0180001842.01.T01:intron 45.0%
!! ACGGTGATGGGTAGCTTATT+TGG + Chr1:28099179-28099198 MsG0180001842.01.T01:intron 45.0%
!! ATTGATTTCGTGGGTTAGGG+TGG - Chr1:28096295-28096314 None:intergenic 45.0%
!! CATAATGGATACACCTGTGG+TGG + Chr1:28090134-28090153 MsG0180001842.01.T01:CDS 45.0%
!! GAATGGTAATCAGCTTGCTG+AGG + Chr1:28090299-28090318 MsG0180001842.01.T01:CDS 45.0%
!! GGGTTAGCCGGTATTTAACT+TGG + Chr1:28091343-28091362 MsG0180001842.01.T01:intron 45.0%
!! TAATCAGCTTGCTGAGGTGT+TGG + Chr1:28090305-28090324 MsG0180001842.01.T01:CDS 45.0%
!! TTGATTTCGTGGGTTAGGGT+GGG - Chr1:28096294-28096313 None:intergenic 45.0%
!! TTATGTTATTATATTATTAT+GGG + Chr1:28099832-28099851 MsG0180001842.01.T01:intron 5.0%
!! TTTATGTTATTATATTATTA+TGG + Chr1:28099831-28099850 MsG0180001842.01.T01:intron 5.0%
!!! ATAAAAAAAAATATTTTTAC+AGG + Chr1:28093321-28093340 MsG0180001842.01.T01:intron 5.0%
!!! ATAATTTTGTTATTTATATT+TGG + Chr1:28090367-28090386 MsG0180001842.01.T01:intron 5.0%
!!! CTTTAAAAAAAAAATAAAAT+TGG + Chr1:28093271-28093290 MsG0180001842.01.T01:intron 5.0%
!!! TAAAAAAAAATATTTTTACA+GGG + Chr1:28093322-28093341 MsG0180001842.01.T01:intron 5.0%
ACTCCTCATTGGAGTGAGAG+TGG - Chr1:28096476-28096495 None:intergenic 50.0%
AGACGGACACACACTAAGTG+CGG + Chr1:28095373-28095392 MsG0180001842.01.T01:intron 50.0%
AGCTGTCTCATACTCTCTGC+TGG + Chr1:28094920-28094939 MsG0180001842.01.T01:intron 50.0%
AGTCCAATAACCACGGCATG+AGG + Chr1:28095037-28095056 MsG0180001842.01.T01:intron 50.0%
CAGAGACTGAAGCACAGTCA+CGG - Chr1:28090813-28090832 None:intergenic 50.0%
CAGTAATCGTCGTAGTGGTG+CGG - Chr1:28094278-28094297 None:intergenic 50.0%
CCAATCTCATTGTCCGCTAG+TGG - Chr1:28091317-28091336 None:intergenic 50.0%
CGACCCCAAAAGTAGGATAG+CGG + Chr1:28094072-28094091 MsG0180001842.01.T01:intron 50.0%
CGCTACAGTAATCGTCGTAG+TGG - Chr1:28094283-28094302 None:intergenic 50.0%
CTGCAGCTGAGACGGTAAAA+GGG - Chr1:28095441-28095460 None:intergenic 50.0%
CTGTAACTCTGCAGCTGAGA+CGG - Chr1:28095449-28095468 None:intergenic 50.0%
CTTTAATTGGGGCCCACTAG+CGG + Chr1:28091301-28091320 MsG0180001842.01.T01:intron 50.0%
GCAAACAGCACACAAGGACT+AGG - Chr1:28095514-28095533 None:intergenic 50.0%
GCCCGATAGTCCAATAACCA+CGG + Chr1:28095030-28095049 MsG0180001842.01.T01:intron 50.0%
GCCGTGGTTATTGGACTATC+GGG - Chr1:28095034-28095053 None:intergenic 50.0%
GTAGTATCTCCAACCGCATC+AGG + Chr1:28098936-28098955 MsG0180001842.01.T01:intron 50.0%
GTCAGAGCAAAGCCCTACAT+AGG - Chr1:28091282-28091301 None:intergenic 50.0%
GTCTCAAGCCATCACCATCA+GGG - Chr1:28091188-28091207 None:intergenic 50.0%
TAATCCAAAGTTCGGCCAGG+AGG - Chr1:28091058-28091077 None:intergenic 50.0%
TCTGCAGCTGAGACGGTAAA+AGG - Chr1:28095442-28095461 None:intergenic 50.0%
TGAACTACGTCCCTCAACTG+TGG + Chr1:28096799-28096818 MsG0180001842.01.T01:intron 50.0%
TGTTAACCTTCCGGTTCTCG+GGG - Chr1:28091095-28091114 None:intergenic 50.0%
TTGCCACTCTCACTCCAATG+AGG + Chr1:28096470-28096489 MsG0180001842.01.T01:intron 50.0%
! CCAAGAGTGTGCTCTTCTCT+AGG + Chr1:28091208-28091227 MsG0180001842.01.T01:intron 50.0%
! CCACTAGCGGACAATGAGAT+TGG + Chr1:28091314-28091333 MsG0180001842.01.T01:intron 50.0%
! CCTAGAGAAGAGCACACTCT+TGG - Chr1:28091211-28091230 None:intergenic 50.0%
! CTCACTCCAATGAGGAGTGT+AGG + Chr1:28096478-28096497 MsG0180001842.01.T01:intron 50.0%
! GAGCAGAGGTGCACATATTG+TGG - Chr1:28098783-28098802 None:intergenic 50.0%
! GGAAAGCTACGAGTCGACTT+TGG - Chr1:28097026-28097045 None:intergenic 50.0%
! GTTAAATACCGGCTAACCCG+GGG - Chr1:28091342-28091361 None:intergenic 50.0%
! TTAAATACCGGCTAACCCGG+GGG - Chr1:28091341-28091360 None:intergenic 50.0%
!! AGCATCGGTTGACCCTTGTT+TGG + Chr1:28097244-28097263 MsG0180001842.01.T01:intron 50.0%
!! TGATTTCGTGGGTTAGGGTG+GGG - Chr1:28096293-28096312 None:intergenic 50.0%
!!! CGCTATCCTACTTTTGGGGT+CGG - Chr1:28094074-28094093 None:intergenic 50.0%
AGGCCTCATGCCGTGGTTAT+TGG - Chr1:28095043-28095062 None:intergenic 55.0%
CAATGAGCCTAGCAGCGAGA+CGG + Chr1:28095356-28095375 MsG0180001842.01.T01:intron 55.0%
CGTCTCAGCTGCAGAGTTAC+AGG + Chr1:28095447-28095466 MsG0180001842.01.T01:intron 55.0%
CTTACCTCCTGGCCGAACTT+TGG + Chr1:28091051-28091070 MsG0180001842.01.T01:intron 55.0%
GCTGAGACGGTAAAAGGGTG+TGG - Chr1:28095436-28095455 None:intergenic 55.0%
GGTCTCAAGCCATCACCATC+AGG - Chr1:28091189-28091208 None:intergenic 55.0%
GTTAACCTTCCGGTTCTCGG+GGG - Chr1:28091094-28091113 None:intergenic 55.0%
! AAGTGTCAGTGTCGGACACC+TGG - Chr1:28090727-28090746 None:intergenic 55.0%
! GACAATGAGATTGGTCCCCC+GGG + Chr1:28091323-28091342 MsG0180001842.01.T01:intron 55.0%
! GGACAATGAGATTGGTCCCC+CGG + Chr1:28091322-28091341 MsG0180001842.01.T01:intron 55.0%
!! GATTTCGTGGGTTAGGGTGG+GGG - Chr1:28096292-28096311 None:intergenic 55.0%
ACATGAGAGGCCTCATGCCG+TGG - Chr1:28095050-28095069 None:intergenic 60.0%
ACCGCACTTGTGGCCTGATG+CGG - Chr1:28098952-28098971 None:intergenic 60.0%
ACCGCATCAGGCCACAAGTG+CGG + Chr1:28098948-28098967 MsG0180001842.01.T01:intron 60.0%
ACGCCACACACCCCTCAATG+AGG - Chr1:28097002-28097021 None:intergenic 60.0%
CACTTGTGGCCTGATGCGGT+TGG - Chr1:28098948-28098967 None:intergenic 60.0%
CGCCACACACCCCTCAATGA+GGG - Chr1:28097001-28097020 None:intergenic 60.0%
CTTCCGGTTCTCGGGGGAAA+GGG - Chr1:28091088-28091107 None:intergenic 60.0%
GGGTTAGGGTGGGGGAGTTA+AGG - Chr1:28096284-28096303 None:intergenic 60.0%
TGTGTGTCCGTCTCGCTGCT+AGG - Chr1:28095366-28095385 None:intergenic 60.0%
! CTCCCTCATTGAGGGGTGTG+TGG + Chr1:28096996-28097015 MsG0180001842.01.T01:intron 60.0%
!! ACTACTCGAGGGTGCCCTGA+TGG + Chr1:28091171-28091190 MsG0180001842.01.T01:intron 60.0%
CCTTCCGGTTCTCGGGGGAA+AGG - Chr1:28091089-28091108 None:intergenic 65.0%
CCTTTCCCCCGAGAACCGGA+AGG + Chr1:28091086-28091105 MsG0180001842.01.T01:intron 65.0%
GGTCCCTTTCCCCCGAGAAC+CGG + Chr1:28091082-28091101 MsG0180001842.01.T01:intron 65.0%
!! CGAGGGTGCCCTGATGGTGA+TGG + Chr1:28091177-28091196 MsG0180001842.01.T01:intron 65.0%
!! GATTGGTCCCCCGGGTTAGC+CGG + Chr1:28091331-28091350 MsG0180001842.01.T01:intron 65.0%
TCGCCGCTACGCTACGCACG+CGG + Chr1:28094308-28094327 MsG0180001842.01.T01:intron 70.0%
CGGCCGCGTGCGTAGCGTAG+CGG - Chr1:28094314-28094333 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 28090099 28100103 28090099 ID=MsG0180001842.01;Name=MsG0180001842.01
Chr1 mRNA 28090099 28100103 28090099 ID=MsG0180001842.01.T01;Parent=MsG0180001842.01;Name=MsG0180001842.01.T01;_AED=0.46;_eAED=0.51;_QI=0|0|0|1|1|1|4|57|175
Chr1 exon 28090099 28090340 28090099 ID=MsG0180001842.01.T01:exon:41678;Parent=MsG0180001842.01.T01
Chr1 exon 28098774 28098873 28098774 ID=MsG0180001842.01.T01:exon:41679;Parent=MsG0180001842.01.T01
Chr1 exon 28099462 28099646 28099462 ID=MsG0180001842.01.T01:exon:41680;Parent=MsG0180001842.01.T01
Chr1 exon 28100046 28100103 28100046 ID=MsG0180001842.01.T01:exon:41681;Parent=MsG0180001842.01.T01
Chr1 CDS 28090099 28090340 28090099 ID=MsG0180001842.01.T01:cds;Parent=MsG0180001842.01.T01
Chr1 CDS 28098774 28098873 28098774 ID=MsG0180001842.01.T01:cds;Parent=MsG0180001842.01.T01
Chr1 CDS 28099462 28099646 28099462 ID=MsG0180001842.01.T01:cds;Parent=MsG0180001842.01.T01
Chr1 CDS 28100046 28100046 28100046 ID=MsG0180001842.01.T01:cds;Parent=MsG0180001842.01.T01
Chr1 three_prime_UTR 28100047 28100103 28100047 ID=MsG0180001842.01.T01:three_prime_utr;Parent=MsG0180001842.01.T01
Gene Sequence

>MsG0180001842.01.T01

ATGGATTCAAAGGGTTCTAAGGATGGGAAGAATTACATAATGGATACACCTGTGGTGGTTTGTGTTATGGAAGATGAAAAAGTTGAAGATCATGTCAATGGTGAAGATGATAGTGATTTTAATTCTTTGTTGCCTCCTAAGAGAGGTTGTATGTCAAGAAATTCTGGTAAGACAAGAAGGAAAGTGCAGTGGAATGATAAGAATGGTAATCAGCTTGCTGAGGTGTTGGAATATGAACCAAGGATCATCCACAATATGTGCACCTCTGCTCATAGTGATTATTTTTCTCAGAAACTTTATGAGAAGTATAAGGAAACATTTGACGTGTACATCAAATCAACGGTTCTTCCATCTTTGCGAGAAAAGAAAGCTGAACTCTTGTTAATAGAATTGCTAAGAAGATGGTCAAATCACAAAGATATGACCGCGAGGCTCTTGAAGTTTTTCATTTATCTTGATAGATACCATATTCGAAGACTCACCTTCCTTCTCTTGAAGAGACTAGCTGTTTATCCTTCTATTACTTGA
Protein sequence

>MsG0180001842.01.T01

MDSKGSKDGKNYIMDTPVVVCVMEDEKVEDHVNGEDDSDFNSLLPPKRGCMSRNSGKTRRKVQWNDKNGNQLAEVLEYEPRIIHNMCTSAHSDYFSQKLYEKYKETFDVYIKSTVLPSLREKKAELLLIELLRRWSNHKDMTARLLKFFIYLDRYHIRRLTFLLLKRLAVYPSIT*