AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048855.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048855.01.T01 MTR_7g056117 86.644 599 30 3 1 591 34 590 0.0 1049
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048855.01.T01 AT3G07180 55.449 624 199 11 1 590 21 599 0.0 632
MsG0080048855.01.T01 AT3G07180 54.487 624 197 12 1 590 21 591 0.0 612
MsG0080048855.01.T01 AT3G07180 56.024 332 119 7 1 306 21 351 2.55e-114 348
MsG0080048855.01.T01 AT3G07180 68.041 97 31 0 494 590 358 454 3.18e-33 132

Find 46 sgRNAs with CRISPR-Local

Find 541 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCTCATTTCTTTCGTTCT+AGG 0.130408 contig490end:-17701 MsG0080048855.01.T01:exon
TCCCACAGACGGCGATATTA+AGG 0.220765 contig490end:+18059 MsG0080048855.01.T01:intergenic
TTGAATCGGTTATCGGAGTT+TGG 0.290757 contig490end:+17795 MsG0080048855.01.T01:intergenic
TGAATCGGTTATCGGAGTTT+GGG 0.346873 contig490end:+17796 MsG0080048855.01.T01:intergenic
TTTGAAGTTGAATCGGTTAT+CGG 0.368419 contig490end:+17788 MsG0080048855.01.T01:intergenic
GGGCTTCTAATAATGAACTA+AGG 0.383129 contig490end:-17535 MsG0080048855.01.T01:exon
ATTCGCAATGCGGTTGCAAT+GGG 0.402020 contig490end:-17472 MsG0080048855.01.T01:exon
ATGAACTAAGGGATTCAATT+CGG 0.460412 contig490end:-17523 MsG0080048855.01.T01:exon
AAATTTACACGGAAAGAGTA+AGG 0.466437 contig490end:+17586 MsG0080048855.01.T01:intergenic
GGATTCGATGTTGGAGGAGA+AGG 0.474593 contig490end:+17613 MsG0080048855.01.T01:intergenic
AAATTTCGTGCTATCTTCAT+CGG 0.483311 contig490end:-17569 MsG0080048855.01.T01:exon
AGGTGCACGGTAGATTTCAA+TGG 0.484784 contig490end:+17658 MsG0080048855.01.T01:intergenic
GATTCGCAATGCGGTTGCAA+TGG 0.500467 contig490end:-17473 MsG0080048855.01.T01:exon
AAGGATTCGATGCGGTCGAA+AGG 0.506734 contig490end:+17632 MsG0080048855.01.T01:intergenic
ACCTTAATATCGCCGTCTGT+GGG 0.517693 contig490end:-18060 MsG0080048855.01.T01:exon
AACCTTAATATCGCCGTCTG+TGG 0.519390 contig490end:-18061 MsG0080048855.01.T01:exon
TCAATGGATTTCCAGAGAAG+AGG 0.520889 contig490end:+17674 MsG0080048855.01.T01:intergenic
TCGAGCCGTCTTAGCTCAGC+TGG 0.521696 contig490end:+17996 MsG0080048855.01.T01:intergenic
ATGAAGAGACGTTTAACGCC+GGG 0.528765 contig490end:+17734 MsG0080048855.01.T01:intergenic
GGCTTCTAATAATGAACTAA+GGG 0.534042 contig490end:-17534 MsG0080048855.01.T01:exon
GAATCGGTTATCGGAGTTTG+GGG 0.534823 contig490end:+17797 MsG0080048855.01.T01:intergenic
CTCTACCAGCTGAGCTAAGA+CGG 0.547265 contig490end:-18001 MsG0080048855.01.T01:exon
GGGACTGGATTCGATGTTGG+AGG 0.552116 contig490end:+17607 MsG0080048855.01.T01:intergenic
TAAGGGACTGGATTCGATGT+TGG 0.557622 contig490end:+17604 MsG0080048855.01.T01:intergenic
ACGATCACTTCACGCTTCCA+TGG 0.559044 contig490end:-17869 MsG0080048855.01.T01:exon
AGCTCAGCTGGTAGAGCGCG+TGG 0.563029 contig490end:+18008 MsG0080048855.01.T01:intergenic
TCGATGCGGTCGAAAGGAAG+AGG 0.563156 contig490end:+17638 MsG0080048855.01.T01:intergenic
ACACGGAAAGAGTAAGGGAC+TGG 0.567958 contig490end:+17592 MsG0080048855.01.T01:intergenic
AATCTCAGATTCACCACCAC+CGG 0.575796 contig490end:-17842 MsG0080048855.01.T01:exon
ACTCTGTGTCTGTCGTTGAA+AGG 0.592026 contig490end:-17445 MsG0080048855.01.T01:intron
TGAATCTGAGATTTCCGCCA+TGG 0.609618 contig490end:+17852 MsG0080048855.01.T01:intergenic
AACCGCGGTGATTCGCAATG+CGG 0.633088 contig490end:-17482 MsG0080048855.01.T01:exon
AATTTACACGGAAAGAGTAA+GGG 0.640749 contig490end:+17587 MsG0080048855.01.T01:intergenic
ATGGAAGCGTGAAGTGATCG+TGG 0.643567 contig490end:+17871 MsG0080048855.01.T01:intergenic
GGTCGAAAGGAAGAGGTGCA+CGG 0.649156 contig490end:+17645 MsG0080048855.01.T01:intergenic
AAGATAGCACGAAATTTACA+CGG 0.657796 contig490end:+17575 MsG0080048855.01.T01:intergenic
GTGGGTTCGATTCCCACAGA+CGG 0.660166 contig490end:+18048 MsG0080048855.01.T01:intergenic
GATGAAGAGACGTTTAACGC+CGG 0.669895 contig490end:+17733 MsG0080048855.01.T01:intergenic
AATCGGTTATCGGAGTTTGG+GGG 0.670109 contig490end:+17798 MsG0080048855.01.T01:intergenic
TTCGCAATGCGGTTGCAATG+GGG 0.684348 contig490end:-17471 MsG0080048855.01.T01:exon
ATCACTTCACGCTTCCATGG+CGG 0.692187 contig490end:-17866 MsG0080048855.01.T01:exon
GAATCGAACCCACGACCACG+TGG 0.692721 contig490end:-18038 MsG0080048855.01.T01:exon
GTGGTTCTGCAAATTCAGTG+AGG 0.708056 contig490end:+17890 MsG0080048855.01.T01:intergenic
AAAATGATTGAATTTAACCG+CGG 0.716413 contig490end:-17497 MsG0080048855.01.T01:exon
AACCGCATTGCGAATCACCG+CGG 0.718123 contig490end:+17480 MsG0080048854.01.T01:intergenic
TGGAGGAGAAGGATTCGATG+CGG 0.778409 contig490end:+17624 MsG0080048854.01.T01:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATCTTATCAAAATAAAT+AGG + contig490end:17029-17048 MsG0080048855.01.T01:intergenic 10.0%
!! AAGATATAAATATAACAATT+CGG - contig490end:14630-14649 MsG0080048855.01.T01:intron 10.0%
!! ATGAAACTTATAAAATTTAT+AGG - contig490end:18074-18093 MsG0080048855.01.T01:exon 10.0%
!! ATTATTAAGTATTAATGAAT+TGG - contig490end:17079-17098 MsG0080048855.01.T01:CDS 10.0%
!! GATTTACTTTAAATAAATAA+TGG - contig490end:13581-13600 MsG0080048855.01.T01:intron 10.0%
!! TAATTAAAATATTCAATTAG+CGG - contig490end:14825-14844 MsG0080048855.01.T01:CDS 10.0%
!! TCTAAAAAAAATTATTATGA+TGG + contig490end:16304-16323 MsG0080048855.01.T01:intergenic 10.0%
!! TTTATTGTTATGAATAATAT+AGG + contig490end:15488-15507 MsG0080048855.01.T01:intergenic 10.0%
!!! AATTATTATTTTTTAAACAC+AGG - contig490end:14366-14385 MsG0080048855.01.T01:intron 10.0%
!!! ATTTTCAATAAAATTAGAAA+TGG + contig490end:17576-17595 MsG0080048855.01.T01:intergenic 10.0%
!!! GTACTTATTTTTATTTTTTT+TGG - contig490end:13290-13309 MsG0080048855.01.T01:intron 10.0%
!!! TTTTTTTATATCAATTAATC+AGG + contig490end:16469-16488 MsG0080048855.01.T01:intergenic 10.0%
!!! TTTTTTTTTTAAATGTTGTT+GGG + contig490end:15462-15481 MsG0080048855.01.T01:intergenic 10.0%
!!! TTTTTTTTTTTAAATGTTGT+TGG + contig490end:15463-15482 MsG0080048855.01.T01:intergenic 10.0%
!! ATAAGTATAACATAGTTAAA+AGG + contig490end:13153-13172 MsG0080048855.01.T01:intergenic 15.0%
!! ATACAATAACATTTAATGTA+GGG - contig490end:14472-14491 MsG0080048855.01.T01:intron 15.0%
!! ATCCTATTCTATTATTATTT+AGG + contig490end:14101-14120 MsG0080048855.01.T01:intergenic 15.0%
!! GAATATATTTCTTGTATTTA+TGG + contig490end:16879-16898 MsG0080048855.01.T01:intergenic 15.0%
!! TGCTAAATATATATCTTTAA+GGG - contig490end:14019-14038 MsG0080048855.01.T01:intron 15.0%
!! TTATGAATATCAAAATGTAA+TGG + contig490end:16961-16980 MsG0080048855.01.T01:intergenic 15.0%
!! TTGCTAAATATATATCTTTA+AGG - contig490end:14018-14037 MsG0080048855.01.T01:intron 15.0%
!!! AAAAAACTATTCTTTCATTT+TGG + contig490end:15635-15654 MsG0080048855.01.T01:intergenic 15.0%
!!! AAATGAAACAATTTTCAATT+AGG + contig490end:15436-15455 MsG0080048855.01.T01:intergenic 15.0%
!!! AATTTTGTAATACAATTATG+TGG - contig490end:15324-15343 MsG0080048855.01.T01:intron 15.0%
!!! ATGATATTCATTTTCTAATT+TGG - contig490end:16369-16388 MsG0080048855.01.T01:CDS 15.0%
!!! CTTTGAAAATTATATAGAAT+TGG - contig490end:15517-15536 MsG0080048855.01.T01:intron 15.0%
!!! GTAATTGTAATTTGTAAATT+GGG - contig490end:11220-11239 MsG0080048855.01.T01:intron 15.0%
!!! TAATTGTAATTTGTAAATTG+GGG - contig490end:11221-11240 MsG0080048855.01.T01:intron 15.0%
!!! TATATTTTTTATATTCCACA+TGG - contig490end:14068-14087 MsG0080048855.01.T01:intron 15.0%
!!! TGATATTCATTTTCTAATTT+GGG - contig490end:16370-16389 MsG0080048855.01.T01:CDS 15.0%
!!! TGTAATTGTAATTTGTAAAT+TGG - contig490end:11219-11238 MsG0080048855.01.T01:intron 15.0%
!!! TGTTTTAAATGTTTATTGTT+GGG - contig490end:15966-15985 MsG0080048855.01.T01:intron 15.0%
!!! TTTGTTTTGTTTCTATTTTT+GGG - contig490end:11159-11178 MsG0080048855.01.T01:intron 15.0%
!!! TTTTACTTTTTCTCATTAAT+TGG - contig490end:13459-13478 MsG0080048855.01.T01:intron 15.0%
!! AAAAATCGAATTCTTTAACT+AGG + contig490end:14509-14528 MsG0080048855.01.T01:intergenic 20.0%
!! AAAAGATAAACATCATAAGT+TGG + contig490end:16719-16738 MsG0080048855.01.T01:intergenic 20.0%
!! ACTTCAAAAATAATTCTTGT+GGG - contig490end:15814-15833 MsG0080048855.01.T01:intron 20.0%
!! ATAAAATTAGAAATGGCATT+TGG + contig490end:17569-17588 MsG0080048855.01.T01:intergenic 20.0%
!! ATTATGTGGTACAAAAATTA+CGG + contig490end:15067-15086 MsG0080048855.01.T01:intergenic 20.0%
!! ATTCATGAAGTTATCAAATA+AGG + contig490end:15554-15573 MsG0080048855.01.T01:intergenic 20.0%
!! ATTTCACATATACAACAAAA+AGG + contig490end:12200-12219 MsG0080048855.01.T01:intergenic 20.0%
!! CAACAAAATTTGACATTAAT+TGG + contig490end:15266-15285 MsG0080048855.01.T01:intergenic 20.0%
!! CATATATATATATATCACCA+TGG - contig490end:15017-15036 MsG0080048855.01.T01:intron 20.0%
!! CATATTTATTACTACTAAGT+TGG - contig490end:14917-14936 MsG0080048855.01.T01:intron 20.0%
!! GATACAATAACATTTAATGT+AGG - contig490end:14471-14490 MsG0080048855.01.T01:intron 20.0%
!! GCTAAATATATATCTTTAAG+GGG - contig490end:14020-14039 MsG0080048855.01.T01:intron 20.0%
!! GTCCTAAATAATAATAGAAT+AGG - contig490end:14096-14115 MsG0080048855.01.T01:intron 20.0%
!! TAAAATTAGAAATGGCATTT+GGG + contig490end:17568-17587 MsG0080048855.01.T01:intergenic 20.0%
!! TATATTCTTGCTTATATTGA+TGG - contig490end:16892-16911 MsG0080048855.01.T01:intron 20.0%
!! TCATATGTTTACACAATAAT+GGG - contig490end:13949-13968 MsG0080048855.01.T01:intron 20.0%
!! TGTATAACTGTAGAAATAAA+TGG + contig490end:13686-13705 MsG0080048855.01.T01:intergenic 20.0%
!! TTCATGAACTTTGAATTATT+TGG - contig490end:14771-14790 MsG0080048855.01.T01:intron 20.0%
!! TTCATGAAGTTATCAAATAA+GGG + contig490end:15553-15572 MsG0080048855.01.T01:intergenic 20.0%
!!! ATAATGGATATACTTTTGTT+TGG - contig490end:13597-13616 MsG0080048855.01.T01:intron 20.0%
!!! ATGATTATAATGGATGAAAT+TGG - contig490end:16038-16057 MsG0080048855.01.T01:intron 20.0%
!!! ATTTTAGTTAAGAGTTTGTT+AGG - contig490end:16120-16139 MsG0080048855.01.T01:intron 20.0%
!!! CTGTTTTAAATGTTTATTGT+TGG - contig490end:15965-15984 MsG0080048855.01.T01:intron 20.0%
!!! GATTTTGTAATACAATTATG+TGG + contig490end:15081-15100 MsG0080048855.01.T01:intergenic 20.0%
!!! GTTACTAATAGTATTGAATA+TGG - contig490end:16275-16294 MsG0080048855.01.T01:intron 20.0%
!!! GTTTGTTTTGTTTCTATTTT+TGG - contig490end:11158-11177 MsG0080048855.01.T01:intron 20.0%
!!! GTTTTAAATGTTTATTGTTG+GGG - contig490end:15967-15986 MsG0080048855.01.T01:intron 20.0%
!!! TCAGTTTATATTTTTAGCAT+CGG - contig490end:12465-12484 MsG0080048855.01.T01:intron 20.0%
!!! TTAATTTTGATGTAACTCAT+TGG + contig490end:15179-15198 MsG0080048855.01.T01:intergenic 20.0%
!!! TTATTTTGTTTTTTCAGCAA+AGG - contig490end:15371-15390 MsG0080048855.01.T01:intron 20.0%
! AAAATGATTGAATTTAACCG+CGG - contig490end:10583-10602 MsG0080048855.01.T01:exon 25.0%
! AAACATAATCATTTAGACCA+TGG - contig490end:15723-15742 MsG0080048855.01.T01:CDS 25.0%
! AAAGATACAAGCAAGAAAAT+AGG - contig490end:17433-17452 MsG0080048855.01.T01:intron 25.0%
! AAAGATTTGTGATTATTGAC+GGG + contig490end:14592-14611 MsG0080048855.01.T01:intergenic 25.0%
! AAATATGACAAGGAAAGAAA+AGG + contig490end:12235-12254 MsG0080048855.01.T01:intergenic 25.0%
! AATTCTCATGAACCTAATAT+TGG + contig490end:17285-17304 MsG0080048855.01.T01:intergenic 25.0%
! ACAAACAATTGAATGTTGTT+AGG - contig490end:10734-10753 MsG0080048855.01.T01:intron 25.0%
! ACAACGAAAGAATAAATACA+AGG + contig490end:17166-17185 MsG0080048855.01.T01:intergenic 25.0%
! ACAATAGAACATACAAAGAA+CGG + contig490end:11947-11966 MsG0080048855.01.T01:intergenic 25.0%
! AGAATAAATACAAGGCTAAA+AGG + contig490end:17158-17177 MsG0080048855.01.T01:intergenic 25.0%
! AGCATAATCAGAAATTTAGA+TGG + contig490end:12695-12714 MsG0080048855.01.T01:intergenic 25.0%
! AGTTATAATTCAAGTCTTAG+AGG - contig490end:14657-14676 MsG0080048855.01.T01:CDS 25.0%
! AGTTTGCCAAATTTATAGTT+GGG - contig490end:11279-11298 MsG0080048855.01.T01:CDS 25.0%
! ATAACAAAATAATGTGGACA+GGG + contig490end:14855-14874 MsG0080048855.01.T01:intergenic 25.0%
! ATCTAAATTTCTGATTATGC+TGG - contig490end:12694-12713 MsG0080048855.01.T01:intron 25.0%
! ATGAATATAACAATTCCGTT+TGG - contig490end:16425-16444 MsG0080048855.01.T01:intron 25.0%
! ATTAATGACATCAACAATAG+AGG + contig490end:13716-13735 MsG0080048855.01.T01:intergenic 25.0%
! ATTACCAAGGATGATTATAA+TGG - contig490end:16028-16047 MsG0080048855.01.T01:intron 25.0%
! ATTATTATTAAGAGCCTGAT+AGG + contig490end:11559-11578 MsG0080048855.01.T01:intergenic 25.0%
! ATTTATTAAGTTTGACACCA+TGG + contig490end:15037-15056 MsG0080048855.01.T01:intergenic 25.0%
! CACTTCAAAAATAATTCTTG+TGG - contig490end:15813-15832 MsG0080048855.01.T01:intron 25.0%
! CATAATTGAAGGATGAAAAA+AGG + contig490end:16786-16805 MsG0080048855.01.T01:intergenic 25.0%
! CATCATGATTTCAAAACTAT+AGG + contig490end:13923-13942 MsG0080048855.01.T01:intergenic 25.0%
! GAAAGATTTGTGATTATTGA+CGG + contig490end:14593-14612 MsG0080048855.01.T01:intergenic 25.0%
! GTCATATGTTTACACAATAA+TGG - contig490end:13948-13967 MsG0080048855.01.T01:intron 25.0%
! GTCTAAATGATTATGTTTCA+TGG + contig490end:15721-15740 MsG0080048855.01.T01:intergenic 25.0%
! TATAAAGGATTTGGAAAGTA+AGG - contig490end:13406-13425 MsG0080048855.01.T01:intron 25.0%
! TCATGTAAGTCTAGATAAAT+AGG - contig490end:11369-11388 MsG0080048855.01.T01:intron 25.0%
! TCGTTTACTAACTAAATATG+AGG + contig490end:16499-16518 MsG0080048855.01.T01:intergenic 25.0%
! TGAATGTTTAAATCTTGAAC+AGG - contig490end:12312-12331 MsG0080048855.01.T01:intron 25.0%
! TTAATGACATCAACAATAGA+GGG + contig490end:13715-13734 MsG0080048855.01.T01:intergenic 25.0%
!! AAATAGGAATTACGTTTTCA+TGG + contig490end:17013-17032 MsG0080048855.01.T01:intergenic 25.0%
!! ACTTTTATCAATTGGATAGT+TGG - contig490end:12041-12060 MsG0080048855.01.T01:CDS 25.0%
!! CTAGAATAAATTTTGCTCTT+GGG - contig490end:12994-13013 MsG0080048855.01.T01:intron 25.0%
!! GATAATAGTTTTCAATCCAA+CGG - contig490end:15299-15318 MsG0080048855.01.T01:intron 25.0%
!! GGCATATTTTTCATTTAACT+CGG - contig490end:14411-14430 MsG0080048855.01.T01:intron 25.0%
!! TATGTATGGATTGTGAAATT+TGG - contig490end:11123-11142 MsG0080048855.01.T01:intron 25.0%
!! TCTGAAATTGTACCAATATT+AGG - contig490end:17270-17289 MsG0080048855.01.T01:CDS 25.0%
!! TGTTGCAAACTTTTATCAAT+TGG - contig490end:12033-12052 MsG0080048855.01.T01:intron 25.0%
!! TTTGTTTCCTTGATTTTTGT+TGG - contig490end:14690-14709 MsG0080048855.01.T01:CDS 25.0%
!!! AATAAGTACAGAAGTTTTGA+AGG + contig490end:13279-13298 MsG0080048855.01.T01:intergenic 25.0%
!!! ATCGAATTTTGAAGTTGAAT+CGG + contig490end:10302-10321 MsG0080048855.01.T01:intergenic 25.0%
!!! ATCTGTTTTTTCATGAAAGT+TGG + contig490end:14454-14473 MsG0080048855.01.T01:intergenic 25.0%
!!! GATAATAGCTTTAAATCCAA+AGG + contig490end:15106-15125 MsG0080048855.01.T01:intergenic 25.0%
!!! TATACTTTTTAACGGAAATC+TGG - contig490end:17930-17949 MsG0080048855.01.T01:exon 25.0%
!!! TATCGACAGTTTTATACATT+TGG + contig490end:15678-15697 MsG0080048855.01.T01:intergenic 25.0%
!!! TATTGTTTAATTTGACACCA+TGG - contig490end:15399-15418 MsG0080048855.01.T01:intron 25.0%
!!! TCAAAATGTAATGGATAATC+TGG + contig490end:16952-16971 MsG0080048855.01.T01:intergenic 25.0%
!!! TCTAGAATAAATTTTGCTCT+TGG - contig490end:12993-13012 MsG0080048855.01.T01:intron 25.0%
!!! TCTGTTTTTTCATGAAAGTT+GGG + contig490end:14453-14472 MsG0080048855.01.T01:intergenic 25.0%
!!! TTCTATTTTTGGGTTGTAAA+AGG - contig490end:11169-11188 MsG0080048855.01.T01:intron 25.0%
AAATCCTTTATACAGCTTTG+GGG + contig490end:13398-13417 MsG0080048855.01.T01:intergenic 30.0%
AAATTTACACGGAAAGAGTA+AGG + contig490end:10497-10516 MsG0080048855.01.T01:intergenic 30.0%
AAATTTCGTGCTATCTTCAT+CGG - contig490end:10511-10530 MsG0080048855.01.T01:intron 30.0%
AAGAATATGGTGAATGTGTA+TGG - contig490end:10829-10848 MsG0080048855.01.T01:intron 30.0%
AAGATAGCACGAAATTTACA+CGG + contig490end:10508-10527 MsG0080048855.01.T01:intergenic 30.0%
AAGATTTGTGATTATTGACG+GGG + contig490end:14591-14610 MsG0080048855.01.T01:intergenic 30.0%
AATGGATGAAATTGGAAAAC+AGG - contig490end:16046-16065 MsG0080048855.01.T01:intron 30.0%
AATTTACACGGAAAGAGTAA+GGG + contig490end:10496-10515 MsG0080048855.01.T01:intergenic 30.0%
ACATCACAAGATAAGATACA+TGG + contig490end:12016-12035 MsG0080048855.01.T01:intergenic 30.0%
ACGTCAAATGAAATATGACA+AGG + contig490end:12245-12264 MsG0080048855.01.T01:intergenic 30.0%
ACTGGGATAACAAAATAATG+TGG + contig490end:14861-14880 MsG0080048855.01.T01:intergenic 30.0%
AGGAATTAGTTAGTTGCATA+TGG - contig490end:16140-16159 MsG0080048855.01.T01:intron 30.0%
ATAATCATTTAGACCATGGT+GGG - contig490end:15727-15746 MsG0080048855.01.T01:CDS 30.0%
ATGAACTAAGGGATTCAATT+CGG - contig490end:10557-10576 MsG0080048855.01.T01:intron 30.0%
ATGAGAAAAAGTAAAACCTG+AGG + contig490end:13455-13474 MsG0080048855.01.T01:intergenic 30.0%
ATGGAATACAAAGCTTGATT+GGG - contig490end:14155-14174 MsG0080048855.01.T01:intron 30.0%
ATGGATGATGATCTTATTGT+AGG - contig490end:11672-11691 MsG0080048855.01.T01:intron 30.0%
ATGTAATTGTACACACCAAA+CGG + contig490end:16443-16462 MsG0080048855.01.T01:intergenic 30.0%
ATTCTATACTATTGCAGATG+TGG - contig490end:13351-13370 MsG0080048855.01.T01:intron 30.0%
ATTGTAACTGGCAGAAAAAA+TGG + contig490end:17381-17400 MsG0080048855.01.T01:intergenic 30.0%
CAAATCCTTTATACAGCTTT+GGG + contig490end:13399-13418 MsG0080048855.01.T01:intergenic 30.0%
CATCTGCAATAGTATAGAAT+AGG + contig490end:13351-13370 MsG0080048855.01.T01:intergenic 30.0%
CCATAAAAACAGAACTTACA+CGG + contig490end:17232-17251 MsG0080048855.01.T01:intergenic 30.0%
CTATCACCCAACTATAAATT+TGG + contig490end:11288-11307 MsG0080048855.01.T01:intergenic 30.0%
GAAGACAATTCTGTTGTATT+AGG - contig490end:17896-17915 MsG0080048855.01.T01:exon 30.0%
GAGTTTGCCAAATTTATAGT+TGG - contig490end:11278-11297 MsG0080048855.01.T01:CDS 30.0%
GATAACAAAATAATGTGGAC+AGG + contig490end:14856-14875 MsG0080048855.01.T01:intergenic 30.0%
GGCTTCTAATAATGAACTAA+GGG - contig490end:10546-10565 MsG0080048855.01.T01:intron 30.0%
GTAACATCCAATATAAGTGT+TGG + contig490end:16260-16279 MsG0080048855.01.T01:intergenic 30.0%
GTAAGTACCAACAAAAATCA+AGG + contig490end:14700-14719 MsG0080048855.01.T01:intergenic 30.0%
TAGCATTCATATACTGAAAC+AGG - contig490end:13753-13772 MsG0080048855.01.T01:intron 30.0%
TCATCCATTATAATCATCCT+TGG + contig490end:16035-16054 MsG0080048855.01.T01:intergenic 30.0%
TCATGAAAGTTGGGATAAAA+AGG + contig490end:14444-14463 MsG0080048855.01.T01:intergenic 30.0%
TCTGTTGTATTAGGTATAGA+GGG - contig490end:17905-17924 MsG0080048855.01.T01:exon 30.0%
TGGATGATGATCTTATTGTA+GGG - contig490end:11673-11692 MsG0080048855.01.T01:intron 30.0%
TGTATTACAAAATCCACCTT+TGG - contig490end:15087-15106 MsG0080048855.01.T01:intron 30.0%
TGTATTACAAAATTCACCGT+TGG + contig490end:15318-15337 MsG0080048855.01.T01:intergenic 30.0%
TTAGCGATAAGTCTCAAAAA+AGG + contig490end:16646-16665 MsG0080048855.01.T01:intergenic 30.0%
TTCTATACTATTGCAGATGT+GGG - contig490end:13352-13371 MsG0080048855.01.T01:intron 30.0%
TTCTGTTGTATTAGGTATAG+AGG - contig490end:17904-17923 MsG0080048855.01.T01:exon 30.0%
TTTGTTGAAACCTGTTATTG+AGG - contig490end:11718-11737 MsG0080048855.01.T01:intron 30.0%
! AAAGTCTTCATTTTCTTCCT+GGG - contig490end:11880-11899 MsG0080048855.01.T01:intron 30.0%
! AAGATGTCATGATGGAAAAT+TGG - contig490end:17122-17141 MsG0080048855.01.T01:CDS 30.0%
! ATTGCTCTTATTTGATTGTC+AGG - contig490end:11841-11860 MsG0080048855.01.T01:intron 30.0%
! GTTTAACTCTTATTTCTTGC+AGG - contig490end:15998-16017 MsG0080048855.01.T01:intron 30.0%
! TCAAGTTGTTTATCCAAACA+AGG + contig490end:11338-11357 MsG0080048855.01.T01:intergenic 30.0%
! TCCATCATGACATCTTTTAT+GGG + contig490end:17118-17137 MsG0080048855.01.T01:intergenic 30.0%
! TGATCTTATTGTAGGGATTT+TGG - contig490end:11680-11699 MsG0080048855.01.T01:intron 30.0%
! TGTAATTTGTAAATTGGGGT+AGG - contig490end:11225-11244 MsG0080048855.01.T01:intron 30.0%
! TTCCATCATGACATCTTTTA+TGG + contig490end:17119-17138 MsG0080048855.01.T01:intergenic 30.0%
! TTTGAAGTTGAATCGGTTAT+CGG + contig490end:10295-10314 MsG0080048855.01.T01:intergenic 30.0%
! TTTTCTTGTCAGTATCATCA+AGG - contig490end:16735-16754 MsG0080048855.01.T01:intron 30.0%
!! AAGCTATTTTGGATAGCTTA+TGG - contig490end:11457-11476 MsG0080048855.01.T01:intron 30.0%
!! AATAGCTTTAAATCCAAAGG+TGG + contig490end:15103-15122 MsG0080048855.01.T01:intergenic 30.0%
!! AGAGGGAGTATACTTTTTAA+CGG - contig490end:17922-17941 MsG0080048855.01.T01:exon 30.0%
!! ATCCAATATAAGTGTTGGAA+AGG + contig490end:16255-16274 MsG0080048855.01.T01:intergenic 30.0%
!! ATGGATATACTTTTGTTTGG+AGG - contig490end:13600-13619 MsG0080048855.01.T01:intron 30.0%
!! GCTGTTTTCATAAGCTATTT+TGG - contig490end:11446-11465 MsG0080048855.01.T01:intron 30.0%
!! TATTTTGTTATCCCAGTTCT+GGG - contig490end:14864-14883 MsG0080048855.01.T01:CDS 30.0%
!! TCCAATATAAGTGTTGGAAA+GGG + contig490end:16254-16273 MsG0080048855.01.T01:intergenic 30.0%
!! TTATTTTGTTATCCCAGTTC+TGG - contig490end:14863-14882 MsG0080048855.01.T01:CDS 30.0%
!!! AAGCTTTTTGAAGTTCTCAT+GGG - contig490end:13784-13803 MsG0080048855.01.T01:intron 30.0%
!!! ACTGCTTAAAGACTAGTTTT+AGG - contig490end:12922-12941 MsG0080048855.01.T01:intron 30.0%
!!! ATTTGTTTTTTAAACCCTGC+TGG - contig490end:11577-11596 MsG0080048855.01.T01:intron 30.0%
!!! GTTCTGTTTTTATGGACTTA+CGG - contig490end:17237-17256 MsG0080048855.01.T01:CDS 30.0%
!!! TAGTTTTGAAATCATGATGC+TGG - contig490end:13924-13943 MsG0080048855.01.T01:intron 30.0%
!!! TTTAGTTTTTCGCATGGTTT+GGG + contig490end:10326-10345 MsG0080048855.01.T01:intergenic 30.0%
!!! TTTTTTCCCTTTCACTTGAA+AGG - contig490end:17688-17707 MsG0080048855.01.T01:exon 30.0%
AAAAACAGAACTTACACGGT+TGG + contig490end:17228-17247 MsG0080048854.01.T01:intergenic 35.0%
AACAGGTGAATTCTAATGAG+TGG - contig490end:12329-12348 MsG0080048855.01.T01:intron 35.0%
AACTTTATCCAGAGATCACA+CGG + contig490end:12525-12544 MsG0080048855.01.T01:intergenic 35.0%
AAGTCAGATGACCTTTATGT+TGG - contig490end:13832-13851 MsG0080048855.01.T01:CDS 35.0%
AAGTTGGAAGCAATTTAGAG+TGG - contig490end:14933-14952 MsG0080048855.01.T01:intron 35.0%
AATAGGATTAAGACCCACTT+TGG - contig490end:14113-14132 MsG0080048855.01.T01:intron 35.0%
AATCACATAGACAGTCTCAT+AGG - contig490end:11498-11517 MsG0080048855.01.T01:CDS 35.0%
AATCATAAACCCAATCCCTT+GGG + contig490end:11101-11120 MsG0080048855.01.T01:intergenic 35.0%
AATGAATAACCATCCCACAA+CGG + contig490end:15771-15790 MsG0080048855.01.T01:intergenic 35.0%
AATGTCATACTCCAAAGAAG+TGG - contig490end:12791-12810 MsG0080048855.01.T01:intron 35.0%
AATTATCGATCAACAGTGAC+AGG - contig490end:17496-17515 MsG0080048855.01.T01:exon 35.0%
ACAAAGTTGCTTCTCATTGT+TGG - contig490end:13509-13528 MsG0080048855.01.T01:intron 35.0%
ACAATTAAGCCAATCCTATC+AGG - contig490end:11542-11561 MsG0080048855.01.T01:intron 35.0%
ACCCAAATTAGTTAAGCCTA+GGG + contig490end:12672-12691 MsG0080048855.01.T01:intergenic 35.0%
AGAAGGATATGCATTGTAAC+TGG + contig490end:17393-17412 MsG0080048855.01.T01:intergenic 35.0%
AGATCATCTGACATATTAGC+AGG - contig490end:12079-12098 MsG0080048855.01.T01:intron 35.0%
ATAGTGTTGTGGTGGTAAAT+GGG - contig490end:10866-10885 MsG0080048855.01.T01:intron 35.0%
ATCATCTTTGCATGCTAATG+AGG - contig490end:17973-17992 MsG0080048855.01.T01:exon 35.0%
ATCCATTAAAGTTACCGTTG+TGG - contig490end:15754-15773 MsG0080048855.01.T01:intron 35.0%
ATGGCAGAGAGAAAAGTTAA+AGG + contig490end:16860-16879 MsG0080048855.01.T01:intergenic 35.0%
ATGTGGTACAAAAATTACGG+AGG + contig490end:15064-15083 MsG0080048855.01.T01:intergenic 35.0%
ATGTGGTACAGAATTATCGT+AGG - contig490end:15341-15360 MsG0080048855.01.T01:intron 35.0%
ATTAGGATCAATTGACACCA+TGG + contig490end:15419-15438 MsG0080048855.01.T01:intergenic 35.0%
ATTATGTGACATCACATCTC+TGG - contig490end:17874-17893 MsG0080048855.01.T01:exon 35.0%
CAAAAAGGACTCGCATAAAT+TGG + contig490end:12185-12204 MsG0080048855.01.T01:intergenic 35.0%
CACAAAACAGCAGAAAATGT+AGG + contig490end:14995-15014 MsG0080048855.01.T01:intergenic 35.0%
CAGGAAGAAAATGAAGACTT+TGG + contig490end:11881-11900 MsG0080048855.01.T01:intergenic 35.0%
CATAATCATTTAGACCATGG+TGG - contig490end:15726-15745 MsG0080048855.01.T01:CDS 35.0%
CATGGAATACAAAGCTTGAT+TGG - contig490end:14154-14173 MsG0080048855.01.T01:intron 35.0%
CATTGTTACGAGCAAATTGA+GGG - contig490end:17720-17739 MsG0080048855.01.T01:exon 35.0%
CCAAAGCTGTATAAAGGATT+TGG - contig490end:13397-13416 MsG0080048855.01.T01:intron 35.0%
CCAAATCCTTTATACAGCTT+TGG + contig490end:13400-13419 MsG0080048855.01.T01:intergenic 35.0%
CTAACATCAGTATGGTTACT+TGG + contig490end:12726-12745 MsG0080048855.01.T01:intergenic 35.0%
CTCAAATGAATAGTAGCTGA+TGG + contig490end:16810-16829 MsG0080048855.01.T01:intergenic 35.0%
GATAAGATAACAGTAGTAGC+AGG - contig490end:12963-12982 MsG0080048855.01.T01:intron 35.0%
GCTAATATGTCAGATGATCT+GGG + contig490end:12079-12098 MsG0080048855.01.T01:intergenic 35.0%
GCTCAAAATAATGCAACTGT+TGG - contig490end:16595-16614 MsG0080048855.01.T01:intron 35.0%
GGATAATCTGGTCAATATGA+AGG + contig490end:16940-16959 MsG0080048855.01.T01:intergenic 35.0%
GGATGAATTGGTGAAGAATA+TGG - contig490end:10816-10835 MsG0080048855.01.T01:intron 35.0%
GGGCTTCTAATAATGAACTA+AGG - contig490end:10545-10564 MsG0080048855.01.T01:intron 35.0%
GGGTTTATGATTGGTATGTA+TGG - contig490end:11109-11128 MsG0080048855.01.T01:intron 35.0%
GTCTTGCAACTTCTACAATT+AGG + contig490end:11791-11810 MsG0080048855.01.T01:intergenic 35.0%
GTTCCATGTATGATACACTT+AGG - contig490end:13553-13572 MsG0080048855.01.T01:intron 35.0%
GTTCTCATTTCTTTCGTTCT+AGG - contig490end:10379-10398 MsG0080048855.01.T01:intron 35.0%
TACACGGTTGGCAAAAAAAA+AGG + contig490end:17216-17235 MsG0080048855.01.T01:intergenic 35.0%
TATAGTGTTGTGGTGGTAAA+TGG - contig490end:10865-10884 MsG0080048855.01.T01:intron 35.0%
TATCTGTGTTCGGATTTAGA+AGG + contig490end:14536-14555 MsG0080048855.01.T01:intergenic 35.0%
TATTAAGAGCCTGATAGGAT+TGG + contig490end:11554-11573 MsG0080048855.01.T01:intergenic 35.0%
TCATTGTTGGATCAGTACTT+TGG - contig490end:13522-13541 MsG0080048855.01.T01:intron 35.0%
TCATTTGACGTCTCTTGTAA+TGG - contig490end:12254-12273 MsG0080048855.01.T01:intron 35.0%
TCCATTAAAGTTACCGTTGT+GGG - contig490end:15755-15774 MsG0080048855.01.T01:intron 35.0%
TCCCTTTCCAACACTTATAT+TGG - contig490end:16250-16269 MsG0080048855.01.T01:intron 35.0%
TCTATACTATTGCAGATGTG+GGG - contig490end:13353-13372 MsG0080048855.01.T01:intron 35.0%
TCTTCATACCTAAAAGCAAG+AGG + contig490end:16339-16358 MsG0080048855.01.T01:intergenic 35.0%
TCTTCGTAAGTTAACTGCTT+AGG + contig490end:13327-13346 MsG0080048855.01.T01:intergenic 35.0%
TGAGAACTTCAAAAAGCTTC+TGG + contig490end:13783-13802 MsG0080048855.01.T01:intergenic 35.0%
TGCTAATATGTCAGATGATC+TGG + contig490end:12080-12099 MsG0080048855.01.T01:intergenic 35.0%
TGTATGTGTCTCTGTTTCAT+TGG - contig490end:12158-12177 MsG0080048855.01.T01:intron 35.0%
TGTCACTGTCATTCTAAACA+AGG + contig490end:17843-17862 MsG0080048855.01.T01:intergenic 35.0%
TGTCATTCTAAACAAGGCTT+TGG + contig490end:17837-17856 MsG0080048855.01.T01:intergenic 35.0%
TGTCCTAAGTGTATCATACA+TGG + contig490end:13559-13578 MsG0080048855.01.T01:intergenic 35.0%
TTAACTCGACGAAGATTTAG+AGG - contig490end:16680-16699 MsG0080048855.01.T01:intron 35.0%
TTAATGAATTGGAAGAGCCA+TGG - contig490end:17090-17109 MsG0080048855.01.T01:CDS 35.0%
TTAGACCTGTTCCTATAGTA+GGG - contig490end:12742-12761 MsG0080048855.01.T01:intron 35.0%
TTCGTGAGAATCACAAAGAT+AGG + contig490end:13116-13135 MsG0080048855.01.T01:intergenic 35.0%
TTGAAGGTCAGAGAAATAAC+TGG + contig490end:13263-13282 MsG0080048855.01.T01:intergenic 35.0%
! AAAATGAAGACTTTGGTGTG+TGG + contig490end:11874-11893 MsG0080048855.01.T01:intergenic 35.0%
! AATCCTTTATACAGCTTTGG+GGG + contig490end:13397-13416 MsG0080048855.01.T01:intergenic 35.0%
! ACGTCTGTTTTACAGTTTCA+GGG - contig490end:14334-14353 MsG0080048855.01.T01:intron 35.0%
! CAAAGTCTTCATTTTCTTCC+TGG - contig490end:11879-11898 MsG0080048855.01.T01:intron 35.0%
! TAAGTTTGAAGTCTGTGTGA+TGG - contig490end:11653-11672 MsG0080048855.01.T01:intron 35.0%
! TAGCTGATGGACATAATTGA+AGG + contig490end:16797-16816 MsG0080048855.01.T01:intergenic 35.0%
! TATTTAGGACTCATTCCATG+TGG + contig490end:14086-14105 MsG0080048855.01.T01:intergenic 35.0%
! TTTGGTAAGGTGTTTGTGAA+TGG - contig490end:10985-11004 MsG0080048855.01.T01:intron 35.0%
!! AAAATAGGAAGTACTTGGCT+TGG - contig490end:17448-17467 MsG0080048855.01.T01:exon 35.0%
!! ATAGACACTTAAGCCTTGTT+TGG - contig490end:11322-11341 MsG0080048855.01.T01:CDS 35.0%
!! ATTTTGTTATCCCAGTTCTG+GGG - contig490end:14865-14884 MsG0080048855.01.T01:CDS 35.0%
!! GATCTTGAGTACTGAATATG+TGG + contig490end:11922-11941 MsG0080048855.01.T01:intergenic 35.0%
!! GATGTTTTCCTCTTGCTTTT+AGG - contig490end:16328-16347 MsG0080048855.01.T01:CDS 35.0%
!! GCAAGAAAATAGGAAGTACT+TGG - contig490end:17443-17462 MsG0080048855.01.T01:intron 35.0%
!! GCATTGTTTTGCCATCTATT+CGG - contig490end:16829-16848 MsG0080048855.01.T01:intron 35.0%
!! GTCAAAAGTATTGCAACTTG+TGG - contig490end:12384-12403 MsG0080048855.01.T01:intron 35.0%
!!! AGCTTTTTGAAGTTCTCATG+GGG - contig490end:13785-13804 MsG0080048855.01.T01:intron 35.0%
!!! CCGTGTAAGTTCTGTTTTTA+TGG - contig490end:17229-17248 MsG0080048855.01.T01:CDS 35.0%
!!! CTTCATCGGTTTCAGTTTTA+GGG - contig490end:10525-10544 MsG0080048855.01.T01:intron 35.0%
!!! GAAGCTTTTTGAAGTTCTCA+TGG - contig490end:13783-13802 MsG0080048855.01.T01:intron 35.0%
!!! GAAGTCAATGCTGTTGATTT+TGG - contig490end:10763-10782 MsG0080048855.01.T01:intron 35.0%
!!! GTTGTAAAAGGTGCTGTTTT+TGG - contig490end:11181-11200 MsG0080048855.01.T01:intron 35.0%
!!! GTTTAGTTTTTCGCATGGTT+TGG + contig490end:10327-10346 MsG0080048855.01.T01:intergenic 35.0%
!!! TCTTCATCGGTTTCAGTTTT+AGG - contig490end:10524-10543 MsG0080048855.01.T01:intron 35.0%
AAAAGGACATGGAACCTATG+AGG + contig490end:12608-12627 MsG0080048854.01.T01:intergenic 40.0%
AAAATGGCTGATAGCACAGA+AGG + contig490end:17365-17384 MsG0080048854.01.T01:intergenic 40.0%
AAACTGTAAAACAGACGTGC+GGG + contig490end:14332-14351 MsG0080048855.01.T01:intergenic 40.0%
AAGGCAATCAAGATCTCTTG+CGG - contig490end:16754-16773 MsG0080048855.01.T01:intron 40.0%
AATATGTCAGATGATCTGGG+TGG + contig490end:12076-12095 MsG0080048855.01.T01:intergenic 40.0%
ACAACTACCACTACTACCTT+AGG - contig490end:14183-14202 MsG0080048855.01.T01:intron 40.0%
ACCATGCGAAAAACTAAACC+CGG - contig490end:10328-10347 MsG0080048855.01.T01:intron 40.0%
ACGTATACTAGTTGTCCCTA+AGG + contig490end:17619-17638 MsG0080048855.01.T01:intergenic 40.0%
AGACAGACACAAACTACAAG+TGG + contig490end:12873-12892 MsG0080048855.01.T01:intergenic 40.0%
AGACTGTCTATGTGATTGCT+TGG + contig490end:11495-11514 MsG0080048855.01.T01:intergenic 40.0%
AGATTGGTATGCTTATCGAC+TGG - contig490end:15926-15945 MsG0080048855.01.T01:intron 40.0%
ATCACAATCAGCATGATCTC+TGG + contig490end:12843-12862 MsG0080048855.01.T01:intergenic 40.0%
ATGGAACCTATGAGGTACAT+TGG + contig490end:12600-12619 MsG0080048855.01.T01:intergenic 40.0%
ATTCTCTTATCGCAGCTAGA+AGG + contig490end:17410-17429 MsG0080048855.01.T01:intergenic 40.0%
ATTGAGAGAAAGTCTCGTAG+AGG + contig490end:16213-16232 MsG0080048855.01.T01:intergenic 40.0%
CAAAATAATGTGGACAGGGA+TGG + contig490end:14851-14870 MsG0080048855.01.T01:intergenic 40.0%
CAAGGGATTGGGTTTATGAT+TGG - contig490end:11100-11119 MsG0080048855.01.T01:intron 40.0%
CAATCATAAACCCAATCCCT+TGG + contig490end:11102-11121 MsG0080048855.01.T01:intergenic 40.0%
CAGACATATGATTTCTCCTC+AGG - contig490end:13436-13455 MsG0080048855.01.T01:intron 40.0%
CAGAGACACATACATAACTC+AGG + contig490end:12152-12171 MsG0080048855.01.T01:intergenic 40.0%
CAGATATATTCCATCTGCGA+AGG - contig490end:13175-13194 MsG0080048855.01.T01:intron 40.0%
CATGCAAAGATGATCATCCA+CGG + contig490end:17967-17986 MsG0080048855.01.T01:intergenic 40.0%
CCATTGTTACGAGCAAATTG+AGG - contig490end:17719-17738 MsG0080048855.01.T01:exon 40.0%
CGTGATTCTACAAAAGGACA+TGG + contig490end:12619-12638 MsG0080048855.01.T01:intergenic 40.0%
CTGGTTGAACATTATCAGAC+CGG - contig490end:14297-14316 MsG0080048855.01.T01:CDS 40.0%
GAAACTGTAAAACAGACGTG+CGG + contig490end:14333-14352 MsG0080048855.01.T01:intergenic 40.0%
GAACAGGTCTAACATCAGTA+TGG + contig490end:12734-12753 MsG0080048855.01.T01:intergenic 40.0%
GAATGTGTATGGAGAAGAGA+AGG - contig490end:10840-10859 MsG0080048855.01.T01:intron 40.0%
GACCCAAATTAGTTAAGCCT+AGG + contig490end:12673-12692 MsG0080048855.01.T01:intergenic 40.0%
GCAAGACTCATTGTATGCTT+TGG - contig490end:11804-11823 MsG0080048855.01.T01:intron 40.0%
GCCCATAAAAGATGTCATGA+TGG - contig490end:17114-17133 MsG0080048855.01.T01:CDS 40.0%
GCCCTAGGCTTAACTAATTT+GGG - contig490end:12668-12687 MsG0080048855.01.T01:intron 40.0%
GCTACTATTCCGTAACACAT+CGG + contig490end:14248-14267 MsG0080048855.01.T01:intergenic 40.0%
GCTTGGATCTCTTTCTAGAT+TGG - contig490end:15910-15929 MsG0080048855.01.T01:intron 40.0%
GGAGAAATCATATGTCTGAC+TGG + contig490end:13434-13453 MsG0080048855.01.T01:intergenic 40.0%
GGCAGCAAAATATTGAGGAA+AGG + contig490end:16536-16555 MsG0080048855.01.T01:intergenic 40.0%
GTAGGACGTGATTCTACAAA+AGG + contig490end:12625-12644 MsG0080048855.01.T01:intergenic 40.0%
GTGTGATCTCTGGATAAAGT+TGG - contig490end:12524-12543 MsG0080048855.01.T01:intron 40.0%
GTTAGACCTGTTCCTATAGT+AGG - contig490end:12741-12760 MsG0080048855.01.T01:intron 40.0%
TAAAGGACGAACCGAATAGA+TGG + contig490end:16843-16862 MsG0080048855.01.T01:intergenic 40.0%
TACAATTAGGAGACTTCACC+TGG + contig490end:11778-11797 MsG0080048855.01.T01:intergenic 40.0%
TAGTGTTGTGGTGGTAAATG+GGG - contig490end:10867-10886 MsG0080048855.01.T01:intron 40.0%
TATATAAACTGCAGCACCAC+TGG - contig490end:12547-12566 MsG0080048855.01.T01:intron 40.0%
TCCCACAACGGTAACTTTAA+TGG + contig490end:15759-15778 MsG0080048855.01.T01:intergenic 40.0%
TCGAAGGCAGCAAAATATTG+AGG + contig490end:16541-16560 MsG0080048855.01.T01:intergenic 40.0%
TGAATCGGTTATCGGAGTTT+GGG + contig490end:10287-10306 MsG0080048855.01.T01:intergenic 40.0%
TGCAGGTACAATCATTACCA+AGG - contig490end:16015-16034 MsG0080048855.01.T01:intron 40.0%
TGCCCTAGGCTTAACTAATT+TGG - contig490end:12667-12686 MsG0080048855.01.T01:intron 40.0%
TGGAACCTATGAGGTACATT+GGG + contig490end:12599-12618 MsG0080048855.01.T01:intergenic 40.0%
TGGTACAATTTCAGAGCTAG+AGG + contig490end:17265-17284 MsG0080048855.01.T01:intergenic 40.0%
TTAAAGTTACCGTTGTGGGA+TGG - contig490end:15759-15778 MsG0080048855.01.T01:intron 40.0%
TTAGATACTTCAGTTGCAGC+TGG - contig490end:12355-12374 MsG0080048855.01.T01:intron 40.0%
TTGAATCGGTTATCGGAGTT+TGG + contig490end:10288-10307 MsG0080048855.01.T01:intergenic 40.0%
TTGACAACCTAAGGTAGTAG+TGG + contig490end:14193-14212 MsG0080048855.01.T01:intergenic 40.0%
TTGTCAATCCCAAATAGCTG+CGG + contig490end:14897-14916 MsG0080048855.01.T01:intergenic 40.0%
TTTCCCTTTCACTTGAAAGG+TGG - contig490end:17691-17710 MsG0080048855.01.T01:exon 40.0%
TTTGCTTAATGCTGACCCAA+GGG - contig490end:11083-11102 MsG0080048855.01.T01:intron 40.0%
! ACAACCACCTTTCAAGTGAA+AGG + contig490end:17698-17717 MsG0080048855.01.T01:intergenic 40.0%
! AGAGAAGGTGTATAGTGTTG+TGG - contig490end:10855-10874 MsG0080048855.01.T01:intron 40.0%
! CAACCACCTTTCAAGTGAAA+GGG + contig490end:17697-17716 MsG0080048855.01.T01:intergenic 40.0%
! CACGTCTGTTTTACAGTTTC+AGG - contig490end:14333-14352 MsG0080048855.01.T01:intron 40.0%
! CCTCAATTTGCTCGTAACAA+TGG + contig490end:17722-17741 MsG0080048855.01.T01:intergenic 40.0%
! CGTGAGATGCACAGTTTTTA+AGG - contig490end:17306-17325 MsG0080048855.01.T01:CDS 40.0%
! GATTGGTATGCTTATCGACT+GGG - contig490end:15927-15946 MsG0080048855.01.T01:intron 40.0%
! GTAAGGTGTTTGTGAATGGT+GGG - contig490end:10989-11008 MsG0080048855.01.T01:intron 40.0%
! GTGCTACTATTGACAACCTA+AGG + contig490end:14202-14221 MsG0080048855.01.T01:intergenic 40.0%
! TAAACAAGGCTTTGGTGAAC+AGG + contig490end:17829-17848 MsG0080048855.01.T01:intergenic 40.0%
! TCAATGGATTTCCAGAGAAG+AGG + contig490end:10409-10428 MsG0080048855.01.T01:intergenic 40.0%
! TTCTAGCTGCGATAAGAGAA+TGG - contig490end:17409-17428 MsG0080048855.01.T01:intron 40.0%
! TTCTAGGTTTTCCTCTTCTC+TGG - contig490end:10395-10414 MsG0080048855.01.T01:intron 40.0%
!! AAATGACAGTAGTGCTGACA+CGG - contig490end:17592-17611 MsG0080048855.01.T01:exon 40.0%
!! GGAGAGATCTCTAAGACTAA+TGG - contig490end:13227-13246 MsG0080048855.01.T01:intron 40.0%
!! TTAATGGATTCAACCCACCA+TGG + contig490end:15743-15762 MsG0080048855.01.T01:intergenic 40.0%
!! TTGATTTTGGCGGGAAATTG+AGG - contig490end:10776-10795 MsG0080048855.01.T01:intron 40.0%
!!! GTCAATGCTGTTGATTTTGG+CGG - contig490end:10766-10785 MsG0080048855.01.T01:intron 40.0%
!!! TCAATGCTGTTGATTTTGGC+GGG - contig490end:10767-10786 MsG0080048855.01.T01:intron 40.0%
AAACACATGGGGAAGAGTCA+TGG - contig490end:14136-14155 MsG0080048855.01.T01:intron 45.0%
AAATATGCCACGTGACCCAA+CGG + contig490end:14400-14419 MsG0080048855.01.T01:intergenic 45.0%
AACCTTAATATCGCCGTCTG+TGG - contig490end:10019-10038 MsG0080048855.01.T01:exon 45.0%
AAGCAGTAGTCTTCCCAATG+TGG + contig490end:12909-12928 MsG0080048855.01.T01:intergenic 45.0%
AAGCTCCATGTCCCTACTAT+AGG + contig490end:12756-12775 MsG0080048855.01.T01:intergenic 45.0%
AAGTTCTCATGGGGCAGTTA+CGG - contig490end:13794-13813 MsG0080048855.01.T01:intron 45.0%
AATCGGTTATCGGAGTTTGG+GGG + contig490end:10285-10304 MsG0080048855.01.T01:intergenic 45.0%
AATCTCAGATTCACCACCAC+CGG - contig490end:10238-10257 MsG0080048855.01.T01:exon 45.0%
AATCTGCAGCACCACTTCTT+TGG + contig490end:12805-12824 MsG0080048855.01.T01:intergenic 45.0%
ACCTTAATATCGCCGTCTGT+GGG - contig490end:10020-10039 MsG0080048855.01.T01:exon 45.0%
ACTCACCCAATGTACCTCAT+AGG - contig490end:12591-12610 MsG0080048855.01.T01:intron 45.0%
ACTCTGTGTCTGTCGTTGAA+AGG - contig490end:10635-10654 MsG0080048855.01.T01:CDS 45.0%
AGAAATGGCATTTGGGAGAG+AGG + contig490end:17561-17580 MsG0080048855.01.T01:intergenic 45.0%
AGCAGTAGTCTTCCCAATGT+GGG + contig490end:12908-12927 MsG0080048855.01.T01:intergenic 45.0%
AGGATCACTCCGATGTGTTA+CGG - contig490end:14236-14255 MsG0080048855.01.T01:CDS 45.0%
AGGTGCACGGTAGATTTCAA+TGG + contig490end:10425-10444 MsG0080048855.01.T01:intergenic 45.0%
AGGTTGTCAATAGTAGCACC+AGG - contig490end:14203-14222 MsG0080048855.01.T01:CDS 45.0%
AGTCATGCCATGACATACAC+AGG + contig490end:12574-12593 MsG0080048855.01.T01:intergenic 45.0%
ATACTATTGCAGATGTGGGG+AGG - contig490end:13356-13375 MsG0080048855.01.T01:intron 45.0%
ATACTTCAGTTGCAGCTGGT+GGG - contig490end:12359-12378 MsG0080048855.01.T01:intron 45.0%
ATCTGGAAACAATTGTGCCG+TGG - contig490end:17947-17966 MsG0080048855.01.T01:exon 45.0%
ATGAAGAGACGTTTAACGCC+GGG + contig490end:10349-10368 MsG0080048855.01.T01:intergenic 45.0%
ATTCGCAATGCGGTTGCAAT+GGG - contig490end:10608-10627 MsG0080048855.01.T01:CDS 45.0%
ATTGAGGCGAAACGATGAAG+AGG - contig490end:10792-10811 MsG0080048855.01.T01:intron 45.0%
CAATGCTTCTGTGTCATGTC+TGG - contig490end:11600-11619 MsG0080048855.01.T01:intron 45.0%
CATGTCCCTACTATAGGAAC+AGG + contig490end:12750-12769 MsG0080048855.01.T01:intergenic 45.0%
CCTACATCACCATTTGTGTC+TGG - contig490end:12640-12659 MsG0080048855.01.T01:intron 45.0%
CGTGCAACAAGACATTGATG+CGG - contig490end:17636-17655 MsG0080048855.01.T01:exon 45.0%
CTAACAATCCGTGTGATCTC+TGG - contig490end:12514-12533 MsG0080048855.01.T01:intron 45.0%
CTGTTCCTATAGTAGGGACA+TGG - contig490end:12748-12767 MsG0080048855.01.T01:intron 45.0%
GAACCCCCAAAGCTGTATAA+AGG - contig490end:13391-13410 MsG0080048855.01.T01:intron 45.0%
GAATCGGTTATCGGAGTTTG+GGG + contig490end:10286-10305 MsG0080048855.01.T01:intergenic 45.0%
GATGAAGAGACGTTTAACGC+CGG + contig490end:10350-10369 MsG0080048855.01.T01:intergenic 45.0%
GATTCGGAGTGAGTTTATGC+CGG - contig490end:11026-11045 MsG0080048855.01.T01:intron 45.0%
GCGAAAGAGGTTTCACAGAA+TGG - contig490end:13884-13903 MsG0080048855.01.T01:intron 45.0%
GGAATGTATGATGCTTCTGC+TGG - contig490end:16616-16635 MsG0080048855.01.T01:intron 45.0%
GGAGTGAAGATGGTTCGATT+CGG - contig490end:11010-11029 MsG0080048855.01.T01:intron 45.0%
GGATGCAAAGCCTCAATAAC+AGG + contig490end:11731-11750 MsG0080048855.01.T01:intergenic 45.0%
GGGAATTGGATGTCTTGTCA+AGG - contig490end:15850-15869 MsG0080048855.01.T01:intron 45.0%
GTTAGAGCCATTCCTCTTCA+AGG + contig490end:18002-18021 MsG0080048855.01.T01:intergenic 45.0%
GTTTGCTTAATGCTGACCCA+AGG - contig490end:11082-11101 MsG0080048855.01.T01:intron 45.0%
TAAGGGACTGGATTCGATGT+TGG + contig490end:10479-10498 MsG0080048855.01.T01:intergenic 45.0%
TAATGCTGACCCAAGGGATT+GGG - contig490end:11089-11108 MsG0080048855.01.T01:intron 45.0%
TCCCCATGTGTTTCCAAAGT+GGG + contig490end:14129-14148 MsG0080048855.01.T01:intergenic 45.0%
TGAAAACTTCACCTGCTCGA+AGG + contig490end:16557-16576 MsG0080048855.01.T01:intergenic 45.0%
TGCCAGACTCACCAACATAA+AGG + contig490end:13846-13865 MsG0080048855.01.T01:intergenic 45.0%
TTAATGCTGACCCAAGGGAT+TGG - contig490end:11088-11107 MsG0080048855.01.T01:intron 45.0%
TTCCCCATGTGTTTCCAAAG+TGG + contig490end:14130-14149 MsG0080048855.01.T01:intergenic 45.0%
TTGTGATTCTCACGAAGTGC+TGG - contig490end:13120-13139 MsG0080048855.01.T01:intron 45.0%
! ACAGGTTGAAGCTAGTTTCC+AGG - contig490end:17514-17533 MsG0080048855.01.T01:exon 45.0%
! ACCCACTTTGGAAACACATG+GGG - contig490end:14125-14144 MsG0080048855.01.T01:intron 45.0%
! AGAAAGAGATCCAAGCGTTG+TGG + contig490end:15906-15925 MsG0080048855.01.T01:intergenic 45.0%
! AGACCCACTTTGGAAACACA+TGG - contig490end:14123-14142 MsG0080048855.01.T01:intron 45.0%
! ATATTTTGCTGCCTTCGAGC+AGG - contig490end:16543-16562 MsG0080048855.01.T01:intron 45.0%
! CCAGACACAAATGGTGATGT+AGG + contig490end:12643-12662 MsG0080048855.01.T01:intergenic 45.0%
! CTGGCTTTCAACAGTGACAT+CGG + contig490end:11759-11778 MsG0080048855.01.T01:intergenic 45.0%
! GAAGGTGTATAGTGTTGTGG+TGG - contig490end:10858-10877 MsG0080048855.01.T01:intron 45.0%
! GACATCTTTTATGGGCACCA+TGG + contig490end:17110-17129 MsG0080048855.01.T01:intergenic 45.0%
! GACCCACTTTGGAAACACAT+GGG - contig490end:14124-14143 MsG0080048855.01.T01:intron 45.0%
! GACCTTTATGTTGGTGAGTC+TGG - contig490end:13841-13860 MsG0080048855.01.T01:CDS 45.0%
! GCAGGTGAAGTTTTCACTTG+AGG - contig490end:16561-16580 MsG0080048855.01.T01:intron 45.0%
! GGTAAGGTGTTTGTGAATGG+TGG - contig490end:10988-11007 MsG0080048855.01.T01:intron 45.0%
! GTGGATTGTTGGGAAGGTTT+CGG - contig490end:10930-10949 MsG0080048855.01.T01:intron 45.0%
! GTGGTTCTGCAAATTCAGTG+AGG + contig490end:10193-10212 MsG0080048855.01.T01:intergenic 45.0%
! TCAACAGTGACATCGGCTAT+AGG + contig490end:11752-11771 MsG0080048855.01.T01:intergenic 45.0%
! TGAATCTGAGATTTCCGCCA+TGG + contig490end:10231-10250 MsG0080048855.01.T01:intergenic 45.0%
!! AGGAAGTACTTGGCTTGGAA+GGG - contig490end:17453-17472 MsG0080048855.01.T01:exon 45.0%
!! TAGGAAGTACTTGGCTTGGA+AGG - contig490end:17452-17471 MsG0080048855.01.T01:exon 45.0%
!! TTATGCCGGTTGGTTCTGAT+GGG - contig490end:11040-11059 MsG0080048855.01.T01:intron 45.0%
!! TTTATGCCGGTTGGTTCTGA+TGG - contig490end:11039-11058 MsG0080048855.01.T01:intron 45.0%
!!! TGTGGCGGAGATTTTTGGTA+AGG - contig490end:10972-10991 MsG0080048855.01.T01:intron 45.0%
AAATGGGGAGGAAGAGGTGA+AGG - contig490end:10882-10901 MsG0080048855.01.T01:intron 50.0%
AAGAGGTGAAGGCTGTGGTT+GGG - contig490end:10893-10912 MsG0080048855.01.T01:intron 50.0%
AAGGATTCGATGCGGTCGAA+AGG + contig490end:10451-10470 MsG0080048855.01.T01:intergenic 50.0%
AAGGGAAGCTTGAGAGCTTG+AGG + contig490end:16236-16255 MsG0080048855.01.T01:intergenic 50.0%
ACACGGAAAGAGTAAGGGAC+TGG + contig490end:10491-10510 MsG0080048855.01.T01:intergenic 50.0%
ACGATCACTTCACGCTTCCA+TGG - contig490end:10211-10230 MsG0080048855.01.T01:exon 50.0%
ATCACTTCACGCTTCCATGG+CGG - contig490end:10214-10233 MsG0080048855.01.T01:exon 50.0%
ATCCTCCCATCAGAACCAAC+CGG + contig490end:11048-11067 MsG0080048855.01.T01:intergenic 50.0%
ATTCTCCTAGGGAGCGAAAG+AGG - contig490end:13871-13890 MsG0080048855.01.T01:CDS 50.0%
CACTGGTCCTGTGTATGTCA+TGG - contig490end:12564-12583 MsG0080048855.01.T01:intron 50.0%
CATGACATACACAGGACCAG+TGG + contig490end:12566-12585 MsG0080048855.01.T01:intergenic 50.0%
CGATGAAGAGGCGGATGAAT+TGG - contig490end:10804-10823 MsG0080048855.01.T01:intron 50.0%
CGATGTCACTGTTGAAAGCC+AGG - contig490end:11757-11776 MsG0080048855.01.T01:intron 50.0%
CTCCAACTAGAGCTTGCGAA+TGG - contig490end:13206-13225 MsG0080048855.01.T01:intron 50.0%
CTCTACCAGCTGAGCTAAGA+CGG - contig490end:10079-10098 MsG0080048855.01.T01:exon 50.0%
CTGGCACATCCATTCTCCTA+GGG - contig490end:13860-13879 MsG0080048855.01.T01:CDS 50.0%
CTTTCATGTGCCACAACGCT+TGG - contig490end:15893-15912 MsG0080048855.01.T01:intron 50.0%
GAGAGAAAGTCTCGTAGAGG+TGG + contig490end:16210-16229 MsG0080048855.01.T01:intergenic 50.0%
GATACTTCAGTTGCAGCTGG+TGG - contig490end:12358-12377 MsG0080048855.01.T01:intron 50.0%
GATTCGCAATGCGGTTGCAA+TGG - contig490end:10607-10626 MsG0080048855.01.T01:CDS 50.0%
GATTGTTGGGAAGGTTTCGG+AGG - contig490end:10933-10952 MsG0080048855.01.T01:intron 50.0%
GCAACAAGACATTGATGCGG+CGG - contig490end:17639-17658 MsG0080048855.01.T01:exon 50.0%
GCAATCAAGATCTCTTGCGG+AGG - contig490end:16757-16776 MsG0080048855.01.T01:intron 50.0%
GCAGTAGTCTTCCCAATGTG+GGG + contig490end:12907-12926 MsG0080048855.01.T01:intergenic 50.0%
GCTGACTGTGTGTAGGGAAT+TGG - contig490end:15836-15855 MsG0080048855.01.T01:intron 50.0%
GGATTCGATGTTGGAGGAGA+AGG + contig490end:10470-10489 MsG0080048855.01.T01:intergenic 50.0%
GGTGAACTCCGCAGCTATTT+GGG - contig490end:14886-14905 MsG0080048855.01.T01:CDS 50.0%
GTAGGGACATGGAGCTTATG+AGG - contig490end:12759-12778 MsG0080048855.01.T01:intron 50.0%
GTCAATAGTAGCACCAGGAC+AGG - contig490end:14208-14227 MsG0080048855.01.T01:CDS 50.0%
GTGATCCTGTTATCCTGTCC+TGG + contig490end:14224-14243 MsG0080048855.01.T01:intergenic 50.0%
TAGCACCAGGACAGGATAAC+AGG - contig490end:14216-14235 MsG0080048855.01.T01:CDS 50.0%
TCCCACAGACGGCGATATTA+AGG + contig490end:10024-10043 MsG0080048855.01.T01:intergenic 50.0%
TCTGGCACATCCATTCTCCT+AGG - contig490end:13859-13878 MsG0080048855.01.T01:CDS 50.0%
TCTTCCCAATGTGGGGATAG+TGG + contig490end:12900-12919 MsG0080048855.01.T01:intergenic 50.0%
TCTTTCGCTCCCTAGGAGAA+TGG + contig490end:13872-13891 MsG0080048855.01.T01:intergenic 50.0%
TGAAACCTCTTTCGCTCCCT+AGG + contig490end:13879-13898 MsG0080048855.01.T01:intergenic 50.0%
TGGAGGAGAAGGATTCGATG+CGG + contig490end:10459-10478 MsG0080048855.01.T01:intergenic 50.0%
TGTTGTGGTGGTAAATGGGG+AGG - contig490end:10870-10889 MsG0080048855.01.T01:intron 50.0%
TTCGCAATGCGGTTGCAATG+GGG - contig490end:10609-10628 MsG0080048855.01.T01:CDS 50.0%
! AACACAGGTTGAGACACCGT+TGG - contig490end:14381-14400 MsG0080048855.01.T01:intron 50.0%
! ACACAGGTTGAGACACCGTT+GGG - contig490end:14382-14401 MsG0080048855.01.T01:intron 50.0%
! AGCTAGTTTCCAGGTAGTCG+AGG - contig490end:17523-17542 MsG0080048855.01.T01:exon 50.0%
! ATGGAAGCGTGAAGTGATCG+TGG + contig490end:10212-10231 MsG0080048855.01.T01:intergenic 50.0%
! CAAGCGTTGTGGCACATGAA+AGG + contig490end:15895-15914 MsG0080048855.01.T01:intergenic 50.0%
! CTCCATTCGCAAGCTCTAGT+TGG + contig490end:13211-13230 MsG0080048855.01.T01:intergenic 50.0%
! GCTTTTAACCACGTGGTCGT+GGG + contig490end:10053-10072 MsG0080048855.01.T01:intergenic 50.0%
! GTGAATGGTGGGAGTGAAGA+TGG - contig490end:11000-11019 MsG0080048855.01.T01:intron 50.0%
! TGGTTGGGAAGTACAGGCAT+GGG - contig490end:10908-10927 MsG0080048855.01.T01:intron 50.0%
! TGTGCCACTATCCCCACATT+GGG - contig490end:12893-12912 MsG0080048855.01.T01:intron 50.0%
! TTCGCAAGCTCTAGTTGGAG+AGG + contig490end:13206-13225 MsG0080048855.01.T01:intergenic 50.0%
! TTGTGCCACTATCCCCACAT+TGG - contig490end:12892-12911 MsG0080048855.01.T01:intron 50.0%
! TTGTGGGCTGACTGTGTGTA+GGG - contig490end:15830-15849 MsG0080048855.01.T01:intron 50.0%
!! ACACAGAAGCATTGCCAGCA+GGG + contig490end:11594-11613 MsG0080048855.01.T01:intergenic 50.0%
!! ACAGGCATGGGTGGATTGTT+GGG - contig490end:10920-10939 MsG0080048855.01.T01:intron 50.0%
!! TACAGGCATGGGTGGATTGT+TGG - contig490end:10919-10938 MsG0080048855.01.T01:intron 50.0%
!! TAGTGCTGACACGGTCCTTA+GGG - contig490end:17601-17620 MsG0080048855.01.T01:exon 50.0%
!! TTGCGTGTGGCGGAGATTTT+TGG - contig490end:10967-10986 MsG0080048855.01.T01:intron 50.0%
!!! GCCGGGTTTAGTTTTTCGCA+TGG + contig490end:10332-10351 MsG0080048855.01.T01:intergenic 50.0%
!!! TTCGTCGGTGGTTTTGGTTC+CGG + contig490end:10260-10279 MsG0080048855.01.T01:intergenic 50.0%
AACCGCATTGCGAATCACCG+CGG + contig490end:10603-10622 MsG0080048855.01.T01:intergenic 55.0%
AACCGCGGTGATTCGCAATG+CGG - contig490end:10598-10617 MsG0080048855.01.T01:exon 55.0%
AGAGGACACTCCTTCGCAGA+TGG + contig490end:13188-13207 MsG0080048855.01.T01:intergenic 55.0%
CGGAGTGAGTTTATGCCGGT+TGG - contig490end:11030-11049 MsG0080048855.01.T01:intron 55.0%
CTCACAAGACCTCGACTACC+TGG + contig490end:17535-17554 MsG0080048855.01.T01:intergenic 55.0%
CTTGTCGCCACTGTGAAGCT+AGG - contig490end:14267-14286 MsG0080048855.01.T01:CDS 55.0%
GAAGAGGTGAAGGCTGTGGT+TGG - contig490end:10892-10911 MsG0080048855.01.T01:intron 55.0%
GAAGGTTTCGGAGGACGAAG+CGG - contig490end:10942-10961 MsG0080048855.01.T01:intron 55.0%
GAGGCGAAACGATGAAGAGG+CGG - contig490end:10795-10814 MsG0080048855.01.T01:intron 55.0%
GCGGGGGAGTTATCTGTGTT+CGG + contig490end:14546-14565 MsG0080048855.01.T01:intergenic 55.0%
GGGACTGGATTCGATGTTGG+AGG + contig490end:10476-10495 MsG0080048855.01.T01:intergenic 55.0%
GGGCAAGCACCAGACACAAA+TGG + contig490end:12652-12671 MsG0080048855.01.T01:intergenic 55.0%
GGGCAGTTACGGCAACTTCT+TGG - contig490end:13805-13824 MsG0080048855.01.T01:intron 55.0%
GGGTGAACTCCGCAGCTATT+TGG - contig490end:14885-14904 MsG0080048855.01.T01:CDS 55.0%
GGTGGTAAATGGGGAGGAAG+AGG - contig490end:10876-10895 MsG0080048855.01.T01:intron 55.0%
GTGGGTTCGATTCCCACAGA+CGG + contig490end:10035-10054 MsG0080048855.01.T01:intergenic 55.0%
TAGCTTCCCACTTTCCCTCG+AGG + contig490end:14568-14587 MsG0080048855.01.T01:intergenic 55.0%
TCGATGCGGTCGAAAGGAAG+AGG + contig490end:10445-10464 MsG0080048855.01.T01:intergenic 55.0%
TCTTCCTGGGATGACGAGCA+TGG - contig490end:11893-11912 MsG0080048855.01.T01:intron 55.0%
TTGTGTCTGGTGCTTGCCCT+AGG - contig490end:12653-12672 MsG0080048855.01.T01:intron 55.0%
! AGGCTGTGGTTGGGAAGTAC+AGG - contig490end:10902-10921 MsG0080048855.01.T01:intron 55.0%
! AGTTTGGGGGTTTTCGTCGG+TGG + contig490end:10272-10291 MsG0080048855.01.T01:intergenic 55.0%
! CGGAGTTTGGGGGTTTTCGT+CGG + contig490end:10275-10294 MsG0080048855.01.T01:intergenic 55.0%
! CTTGTGGGCTGACTGTGTGT+AGG - contig490end:15829-15848 MsG0080048855.01.T01:intron 55.0%
! GGCTTTTAACCACGTGGTCG+TGG + contig490end:10054-10073 MsG0080048855.01.T01:intergenic 55.0%
! GGGGTTTTCGTCGGTGGTTT+TGG + contig490end:10266-10285 MsG0080048855.01.T01:intergenic 55.0%
! GGTCGAAAGGAAGAGGTGCA+CGG + contig490end:10438-10457 MsG0080048855.01.T01:intergenic 55.0%
! GTGGTTGGGAAGTACAGGCA+TGG - contig490end:10907-10926 MsG0080048855.01.T01:intron 55.0%
! TTGGGAAGTACAGGCATGGG+TGG - contig490end:10911-10930 MsG0080048855.01.T01:intron 55.0%
!! GACACAGAAGCATTGCCAGC+AGG + contig490end:11595-11614 MsG0080048855.01.T01:intergenic 55.0%
!! GCATGGGTGGATTGTTGGGA+AGG - contig490end:10924-10943 MsG0080048855.01.T01:intron 55.0%
!! GTAGTGCTGACACGGTCCTT+AGG - contig490end:17600-17619 MsG0080048855.01.T01:exon 55.0%
!! TGTGGGGAGGTGTTGTGGTA+TGG - contig490end:13369-13388 MsG0080048855.01.T01:intron 55.0%
AGATAACTCCCCCGCCTCGA+GGG - contig490end:14551-14570 MsG0080048855.01.T01:intron 60.0%
CGCCACTGTGAAGCTAGGTG+CGG - contig490end:14272-14291 MsG0080048855.01.T01:CDS 60.0%
CTTCAGTTGCAGCTGGTGGG+AGG - contig490end:12362-12381 MsG0080048855.01.T01:intron 60.0%
CTTCCCACTTTCCCTCGAGG+CGG + contig490end:14565-14584 MsG0080048855.01.T01:intergenic 60.0%
GAATCGAACCCACGACCACG+TGG - contig490end:10042-10061 MsG0080048855.01.T01:exon 60.0%
GACATTGATGCGGCGGCTCT+TGG - contig490end:17646-17665 MsG0080048855.01.T01:exon 60.0%
GACGTGCGGGTCTCGTATTC+CGG + contig490end:14319-14338 MsG0080048855.01.T01:intergenic 60.0%
GCGGAGTTCACCCCAGAACT+GGG + contig490end:14878-14897 MsG0080048855.01.T01:intergenic 60.0%
GGAGGAAGAGGTGAAGGCTG+TGG - contig490end:10888-10907 MsG0080048855.01.T01:intron 60.0%
TCGAGCCGTCTTAGCTCAGC+TGG + contig490end:10087-10106 MsG0080048855.01.T01:intergenic 60.0%
TGAGACACCGTTGGGTCACG+TGG - contig490end:14390-14409 MsG0080048855.01.T01:intron 60.0%
TGCGGAGTTCACCCCAGAAC+TGG + contig490end:14879-14898 MsG0080048855.01.T01:intergenic 60.0%
TTCCCACTTTCCCTCGAGGC+GGG + contig490end:14564-14583 MsG0080048855.01.T01:intergenic 60.0%
! CGAAGCGGTTTTGCGTGTGG+CGG - contig490end:10957-10976 MsG0080048855.01.T01:intron 60.0%
! GCGCGTGGCTTTTAACCACG+TGG + contig490end:10060-10079 MsG0080048855.01.T01:intergenic 60.0%
! GGACGAAGCGGTTTTGCGTG+TGG - contig490end:10954-10973 MsG0080048855.01.T01:intron 60.0%
!! GCAGATGTGGGGAGGTGTTG+TGG - contig490end:13364-13383 MsG0080048855.01.T01:intron 60.0%
!! TGCCGGTTGGTTCTGATGGG+AGG - contig490end:11043-11062 MsG0080048855.01.T01:intron 60.0%
!!! GGTGGTTTTGGTTCCGGTGG+TGG + contig490end:10254-10273 MsG0080048855.01.T01:intergenic 60.0%
!!! GTCGGTGGTTTTGGTTCCGG+TGG + contig490end:10257-10276 MsG0080048855.01.T01:intergenic 60.0%
AGCTCAGCTGGTAGAGCGCG+TGG + contig490end:10075-10094 MsG0080048855.01.T01:intergenic 65.0%
CAGATAACTCCCCCGCCTCG+AGG - contig490end:14550-14569 MsG0080048855.01.T01:intron 65.0%
CGCCGCACCTAGCTTCACAG+TGG + contig490end:14277-14296 MsG0080048855.01.T01:intergenic 65.0%
GCTGCCATGCTCGTCATCCC+AGG + contig490end:11900-11919 MsG0080048855.01.T01:intergenic 65.0%
TCCCACTTTCCCTCGAGGCG+GGG + contig490end:14563-14582 MsG0080048855.01.T01:intergenic 65.0%
TGTGAAGCTAGGTGCGGCGC+TGG - contig490end:14278-14297 MsG0080048855.01.T01:CDS 65.0%
CCCACTTTCCCTCGAGGCGG+GGG + contig490end:14562-14581 MsG0080048855.01.T01:intergenic 70.0%
CCCCCGCCTCGAGGGAAAGT+GGG - contig490end:14559-14578 MsG0080048855.01.T01:intron 70.0%
TCCCCCGCCTCGAGGGAAAG+TGG - contig490end:14558-14577 MsG0080048855.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
contig490end gene 10001 18101 10001 ID=MsG0080048855.01;
contig490end mRNA 10001 18101 10001 ID=MsG0080048855.01.T01;Parent=MsG0080048855.01
contig490end exon 10001 10288 10001 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end exon 10567 10724 10567 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end CDS 10605 10724 10605 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end CDS 11252 11355 11252 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end exon 11252 11355 11252 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end CDS 11465 11537 11465 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end exon 11465 11537 11465 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end CDS 12035 12082 12035 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end exon 12035 12082 12035 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end CDS 12171 12251 12171 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end exon 12171 12251 12171 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end CDS 13699 13714 13699 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end exon 13699 13714 13699 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end CDS 13814 13897 13814 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end exon 13814 13897 13814 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end CDS 14197 14327 14197 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end exon 14197 14327 14197 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end CDS 14645 14734 14645 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end exon 14645 14734 14645 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end CDS 14813 14924 14813 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end exon 14813 14924 14813 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end CDS 15719 15768 15719 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end exon 15719 15768 15719 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end CDS 16150 16239 16150 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end exon 16150 16239 16150 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end CDS 16324 16408 16324 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end exon 16324 16408 16324 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end CDS 16981 17346 16981 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end exon 16981 17346 16981 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
contig490end CDS 17446 17771 17446 ID=MsG0080048855.01.T01.cds;Parent=MsG0080048855.01.T01
contig490end exon 17446 18101 17446 ID=MsG0080048855.01.T01.exon;Parent=MsG0080048855.01.T01
Gene Sequence

>MsG0080048855.01.T01

ATGCGAAAAACTAAACCCGGCGTTAAACGTCTCTTCATCACTCTCACAGTTCTCATTTCTTTCGTTCTAGGTTTTCCTCTTCTCTGGAAATCCATTGAAATCTACCGTGCACCTCTTCCTTTCGACCGCATCGAATCCTTCTCCTCCAACATCGAATCCAGTCCCTTACTCTTTCCGTGTAAATTTCGTGCTATCTTCATCGGTTTCAGTTTTAGGGCTTCTAATAATGAACTAAGGGATTCAATTCGGAGCAAAATGATTGAATTTAACCGCGGTGATTCGCAATGCGGTTGCAATGGGGATTACTCTGTGTCTGTCGTTGAAAGGTCTGATGAAGTCAATGCTGTTGATTTTGGCGGGAAATTGAGGCGAAACGATGAAGAGGCGGATGAATTGGTGAAGAATATGGTGAATGTGTATGGAGAAGAGAAGGTGTATAGTGTTGTGGTGGTAAATGGGGAGGAAGAGGTGAAGGCTGTGGTTGGGAAGTACAGGCATGGGTGGATTGTTGGGAAGGTTTCGGAGGACGAAGCGGTTTTGCGTGTGGCGGAGATTTTTGGTAAGGTGTTTGTGAATGGTGGGAGTGAAGATGGTTCGATTCGGAGTGAGTTTATGCCGGTTGGTTCTGATGGGAGGATTGTTCTTTCTTTTAGTTTGCTTAATGCTGACCCAAGGGATTGGGTTTATGATTGGGATTTTGGTGAAATAGACAAGACTTTGTTGAAACCTGTTATTGAGGCTTTGCATCCTATAGCCGATGTCACTGTTGAAAGCCAGGTTTTGTACCACACACCAAAGTCTTCATTTTCTTCCTGGGATGACGAGCATGGCAGCCACATATTCAGTACTCAAGATCTTCCGTTCTTTGTGAATTCTAATGAGTGGCACTTAGATACTTCAGTTGCAGCTGGTGGGAGATATATTCCATCTGCGAAGGAGTGTCCTCTCCAACTAGAGCTTGCGAATGGAGAGATCTCTAAGACTAATGGCTTTATATCTCCAGTTATTTCTCTGACCTTCAAAACTTCTATGTGGGGAGGTGTTGTGGTATGGAACCCCCAAAGCTGTATAAAGGATTTGGAAAGTAAGGATCCAGTCAGACATATGATTTCTCCTCAGGATCTCCAGAAGCTTTTTGAAGTTCTCATGGGGCAGTTACGGCAACTTCTTGGTCTAAAGTCAGATGACCTTTATGTTGGTGAGTCTGGCACATCCATTCTCCTAGGGAGCGAAAGAGGTTTCACAGAATGGTTGTCAATAGTAGCACCAGGACAGGATAACAGGATCACTCCGATGTGTTACGGAATAGTAGCTTGTCGCCACTGTGAAGCTAGGTTGAGACACCGTTGGGGAATTGGATGTCTTGTCAAGGAAGCATTTTGCTTTAATCTCCTTTCATGTGCCACAACGCTTGGATCTCTTTCTAGATTGGTACAATCATTACCAAGGATGATTATAATGGATGAAATTGGAAAACAGGTGAAGTTTTCACTTGAGGCTGCAAAATCTGCTCAAAATAATGCAACTGTTGGAATGTATGATGCTTCTGCTGTATCATCAAGGCAATCAAGATCTCTTGCGGAGGATGCCTTTTTTCATCCTTCAATTATGTCCATCAGCTACTATTCATTTGAGCATTGTTTTGCCATCTATTCGCCATTTTTTCTGCCAGTTACAATGCATATCCTTCTAGCTGCGATAAGAGAATGGAAAAGATACAAGCAAGAAAATAGGAAGTACTTGGCTTGGAAGGGCAAAGCAAAAGCTGCAGCTTAA

Protein sequence

>MsG0080048855.01.T01

MRKTKPGVKRLFITLTVLISFVLGFPLLWKSIEIYRAPLPFDRIESFSSNIESSPLLFPCKFRAIFIGFSFRASNNELRDSIRSKMIEFNRGDSQCGCNGDYSVSVVERSDEVNAVDFGGKLRRNDEEADELVKNMVNVYGEEKVYSVVVVNGEEEVKAVVGKYRHGWIVGKVSEDEAVLRVAEIFGKVFVNGGSEDGSIRSEFMPVGSDGRIVLSFSLLNADPRDWVYDWDFGEIDKTLLKPVIEALHPIADVTVESQVLYHTPKSSFSSWDDEHGSHIFSTQDLPFFVNSNEWHLDTSVAAGGRYIPSAKECPLQLELANGEISKTNGFISPVISLTFKTSMWGGVVVWNPQSCIKDLESKDPVRHMISPQDLQKLFEVLMGQLRQLLGLKSDDLYVGESGTSILLGSERGFTEWLSIVAPGQDNRITPMCYGIVACRHCEARLRHRWGIGCLVKEAFCFNLLSCATTLGSLSRLVQSLPRMIIMDEIGKQVKFSLEAAKSAQNNATVGMYDASAVSSRQSRSLAEDAFFHPSIMSISYYSFEHCFAIYSPFFLPVTMHILLAAIREWKRYKQENRKYLAWKGKAKAAA*