AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017039.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017039.01.T01 MTR_3g099767 73.377 308 20 3 1 246 102 409 4.55e-151 430
MsG0380017039.01.T01 MTR_1g055255 32.963 270 109 4 11 208 124 393 1.48e-40 147
MsG0380017039.01.T01 MTR_8g095440 32.836 268 108 5 3 198 22 289 2.44e-39 141
MsG0380017039.01.T01 MTR_1g096490 32.453 265 107 4 6 198 25 289 3.23e-39 142
MsG0380017039.01.T01 MTR_8g095440 32.836 268 108 5 3 198 22 289 1.57e-38 140
MsG0380017039.01.T01 MTR_1g054865 31.481 270 112 5 1 197 150 419 9.13e-38 140
MsG0380017039.01.T01 MTR_1g041150 30.385 260 107 4 11 197 118 376 4.96e-37 137
MsG0380017039.01.T01 MTR_5g092810 30.502 259 108 4 11 197 92 350 1.64e-36 135
MsG0380017039.01.T01 MTR_5g092815 29.730 259 110 4 11 197 91 349 3.93e-36 132
MsG0380017039.01.T01 MTR_1g052530 30.943 265 111 4 5 197 46 310 9.02e-36 132
MsG0380017039.01.T01 MTR_1g052530 31.274 259 106 4 11 197 52 310 3.58e-35 132
MsG0380017039.01.T01 MTR_1g101630 33.333 267 106 4 3 197 33 299 1.79e-34 130
MsG0380017039.01.T01 MTR_7g106730 29.730 259 110 4 11 197 88 346 2.97e-34 127
MsG0380017039.01.T01 MTR_4g132070 30.888 259 107 4 11 197 91 349 3.17e-34 129
MsG0380017039.01.T01 MTR_5g099240 30.370 270 115 7 1 197 13 282 4.47e-34 128
MsG0380017039.01.T01 MTR_3g098090 30.827 266 112 4 5 198 26 291 5.13e-34 128
MsG0380017039.01.T01 MTR_3g098070 31.538 260 106 5 11 198 29 288 6.43e-34 125
MsG0380017039.01.T01 MTR_5g099240 30.370 270 115 7 1 197 85 354 8.02e-34 128
MsG0380017039.01.T01 MTR_5g089320 30.116 259 109 4 11 197 68 326 1.38e-33 127
MsG0380017039.01.T01 MTR_3g051770 28.958 259 112 3 11 197 84 342 2.31e-33 127
MsG0380017039.01.T01 MTR_0028s0170 29.730 259 110 4 11 197 78 336 8.12e-33 125
MsG0380017039.01.T01 MTR_3g098070 31.538 260 106 5 11 198 29 288 9.03e-33 125
MsG0380017039.01.T01 MTR_1g026190 31.939 263 103 5 11 197 78 340 9.26e-33 125
MsG0380017039.01.T01 MTR_7g091890 29.323 266 116 4 5 198 52 317 1.18e-32 124
MsG0380017039.01.T01 MTR_7g091890 29.323 266 116 4 5 198 52 317 2.54e-32 124
MsG0380017039.01.T01 MTR_8g099095 29.197 274 122 4 11 212 66 339 3.61e-32 124
MsG0380017039.01.T01 MTR_4g107490 30.827 266 112 5 4 197 66 331 1.13e-30 120
MsG0380017039.01.T01 MTR_7g106710 29.344 259 111 4 11 197 135 393 5.37e-30 116
MsG0380017039.01.T01 MTR_7g106710 29.344 259 111 4 11 197 135 393 8.50e-30 117
MsG0380017039.01.T01 MTR_7g106710 29.344 259 111 4 11 197 135 393 1.93e-29 116
MsG0380017039.01.T01 MTR_7g106710 29.344 259 111 4 11 197 135 393 2.13e-29 116
MsG0380017039.01.T01 MTR_4g066660 27.652 264 119 4 6 197 67 330 8.17e-27 108
MsG0380017039.01.T01 MTR_5g009830 28.185 259 114 4 11 197 67 325 1.39e-26 107
MsG0380017039.01.T01 MTR_5g009830 28.571 259 113 4 11 197 67 325 2.23e-26 107
MsG0380017039.01.T01 MTR_7g068710 28.679 265 115 4 6 197 51 314 5.71e-26 106
MsG0380017039.01.T01 MTR_4g132040 27.586 261 114 6 11 197 95 354 8.74e-24 100
MsG0380017039.01.T01 MTR_5g022030 24.000 300 148 6 1 226 89 382 2.17e-23 99.0
MsG0380017039.01.T01 MTR_5g022030 24.000 300 148 6 1 226 89 382 2.88e-23 99.0
MsG0380017039.01.T01 MTR_1g026075 35.088 114 67 1 7 113 70 183 1.51e-21 90.5
MsG0380017039.01.T01 MTR_5g017830 26.259 278 125 8 1 200 124 399 2.99e-21 93.2
MsG0380017039.01.T01 MTR_4g086660 26.966 267 113 7 14 201 140 403 4.15e-21 92.8
MsG0380017039.01.T01 MTR_7g089480 24.910 277 126 6 1 198 131 404 4.90e-21 92.4
MsG0380017039.01.T01 MTR_8g079790 25.000 284 124 8 1 200 115 393 3.60e-19 87.0
MsG0380017039.01.T01 MTR_3g092230 25.091 275 126 8 1 197 128 400 1.86e-18 85.1
MsG0380017039.01.T01 MTR_7g118020 23.273 275 131 7 1 197 134 406 1.77e-16 79.0
MsG0380017039.01.T01 MTR_3g110405 25.573 262 128 9 3 198 29 289 1.23e-14 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017039.01.T01 AT1G12680 54.333 300 75 3 2 239 98 397 5.70e-103 307
MsG0380017039.01.T01 AT3G10660 32.075 265 96 6 11 197 186 444 1.85e-38 142
MsG0380017039.01.T01 AT3G10660 32.075 265 96 6 11 197 186 444 1.85e-38 142
MsG0380017039.01.T01 AT4G35310 31.852 270 111 7 1 197 86 355 2.12e-38 141
MsG0380017039.01.T01 AT4G35310 31.852 270 111 7 1 197 86 355 2.12e-38 141
MsG0380017039.01.T01 AT1G76040 32.046 259 104 3 11 197 112 370 3.48e-38 140
MsG0380017039.01.T01 AT1G76040 32.046 259 104 3 11 197 112 370 5.65e-38 140
MsG0380017039.01.T01 AT4G09570 32.453 265 107 4 6 198 20 284 2.61e-37 137
MsG0380017039.01.T01 AT1G50700 31.660 259 105 4 11 197 73 331 3.86e-37 137
MsG0380017039.01.T01 AT1G50700 31.660 259 105 4 11 197 73 331 5.03e-37 137
MsG0380017039.01.T01 AT1G50700 31.660 259 105 4 11 197 73 331 5.15e-37 137
MsG0380017039.01.T01 AT2G17290 31.481 270 112 7 1 197 74 343 5.21e-37 137
MsG0380017039.01.T01 AT2G17290 31.481 270 112 7 1 197 74 343 5.21e-37 137
MsG0380017039.01.T01 AT1G35670 32.075 265 108 4 6 198 21 285 6.02e-37 136
MsG0380017039.01.T01 AT4G38230 31.111 270 113 7 1 197 13 282 2.75e-36 134
MsG0380017039.01.T01 AT4G38230 31.111 270 113 7 1 197 13 282 2.75e-36 134
MsG0380017039.01.T01 AT2G38910 30.741 270 112 5 1 196 123 391 2.86e-36 135
MsG0380017039.01.T01 AT4G04720 30.888 259 107 4 11 197 80 338 3.03e-36 135
MsG0380017039.01.T01 AT4G04720 30.888 259 107 4 11 197 80 338 3.03e-36 135
MsG0380017039.01.T01 AT4G38230 31.111 270 113 7 1 197 43 312 4.44e-36 134
MsG0380017039.01.T01 AT3G20410 30.888 259 107 4 11 197 91 349 5.21e-36 134
MsG0380017039.01.T01 AT3G20410 30.888 259 107 4 11 197 91 349 5.21e-36 134
MsG0380017039.01.T01 AT5G04870 30.566 265 100 6 11 197 150 408 1.52e-35 134
MsG0380017039.01.T01 AT1G12580 32.576 264 106 4 6 197 39 302 2.92e-35 132
MsG0380017039.01.T01 AT5G23580 30.597 268 114 4 3 198 14 281 5.97e-35 131
MsG0380017039.01.T01 AT2G35890 29.730 259 110 4 11 197 132 390 1.89e-34 130
MsG0380017039.01.T01 AT2G35890 29.730 259 110 4 11 197 132 390 1.89e-34 130
MsG0380017039.01.T01 AT1G61950 30.682 264 110 4 7 197 94 357 5.63e-34 129
MsG0380017039.01.T01 AT4G04740 33.200 250 83 4 26 197 84 327 6.00e-34 129
MsG0380017039.01.T01 AT4G21940 29.344 259 111 3 11 197 102 360 7.48e-34 128
MsG0380017039.01.T01 AT4G04740 33.068 251 84 4 25 197 83 327 8.07e-34 128
MsG0380017039.01.T01 AT4G04740 33.068 251 84 4 25 197 83 327 8.07e-34 128
MsG0380017039.01.T01 AT4G04740 33.068 251 84 4 25 197 83 327 8.07e-34 128
MsG0380017039.01.T01 AT4G04740 33.068 251 84 4 25 197 83 327 8.07e-34 128
MsG0380017039.01.T01 AT4G04740 33.068 251 84 4 25 197 83 327 8.07e-34 128
MsG0380017039.01.T01 AT4G04740 33.068 251 84 4 25 197 83 327 8.07e-34 128
MsG0380017039.01.T01 AT4G21940 29.344 259 111 3 11 197 102 360 1.07e-33 128
MsG0380017039.01.T01 AT4G21940 29.344 259 111 3 11 197 102 360 1.07e-33 128
MsG0380017039.01.T01 AT5G19360 30.000 270 116 6 1 197 57 326 1.17e-33 128
MsG0380017039.01.T01 AT5G12180 30.502 259 108 5 11 197 73 331 2.05e-33 127
MsG0380017039.01.T01 AT3G57530 29.811 265 114 4 5 197 57 321 4.13e-33 125
MsG0380017039.01.T01 AT3G57530 29.811 265 114 4 5 197 57 321 1.66e-32 125
MsG0380017039.01.T01 AT4G23650 30.888 259 107 4 11 197 78 336 2.20e-32 124
MsG0380017039.01.T01 AT5G12480 29.231 260 112 4 11 198 59 318 2.56e-31 121
MsG0380017039.01.T01 AT1G74740 31.227 269 113 5 1 197 49 317 4.52e-31 120
MsG0380017039.01.T01 AT1G18890 31.599 269 112 5 1 197 53 321 2.30e-30 119
MsG0380017039.01.T01 AT2G41860 29.545 264 114 4 6 197 49 312 4.49e-30 118
MsG0380017039.01.T01 AT2G41860 29.545 264 114 4 6 197 49 312 4.90e-30 118
MsG0380017039.01.T01 AT5G19450 28.958 259 112 4 11 197 57 315 5.25e-30 117
MsG0380017039.01.T01 AT5G19450 28.958 259 112 4 11 197 57 315 5.25e-30 117
MsG0380017039.01.T01 AT4G04710 30.038 263 110 6 7 197 32 292 7.52e-30 117
MsG0380017039.01.T01 AT3G51850 28.947 266 117 3 4 197 47 312 4.42e-29 114
MsG0380017039.01.T01 AT4G04695 30.798 263 106 7 11 197 28 290 7.64e-29 114
MsG0380017039.01.T01 AT3G51850 28.947 266 117 3 4 197 47 312 2.62e-28 113
MsG0380017039.01.T01 AT4G04710 28.832 274 112 5 7 197 32 305 2.71e-28 112
MsG0380017039.01.T01 AT4G04710 28.832 274 112 5 7 197 32 305 2.75e-28 112
MsG0380017039.01.T01 AT3G51850 28.947 266 117 3 4 197 47 312 3.24e-28 112
MsG0380017039.01.T01 AT2G17890 25.333 300 144 6 1 226 98 391 1.13e-25 105
MsG0380017039.01.T01 AT4G04700 29.278 263 110 6 11 197 28 290 4.90e-25 103
MsG0380017039.01.T01 AT2G31500 26.641 259 118 5 11 197 66 324 3.48e-24 101
MsG0380017039.01.T01 AT5G66210 25.333 300 144 7 1 226 52 345 1.58e-23 99.0
MsG0380017039.01.T01 AT5G66210 25.333 300 144 7 1 226 52 345 1.58e-23 99.0
MsG0380017039.01.T01 AT5G66210 25.333 300 144 7 1 226 52 345 2.74e-23 98.6
MsG0380017039.01.T01 AT5G66210 25.830 271 127 5 1 197 52 322 3.25e-23 98.6
MsG0380017039.01.T01 AT5G66210 25.086 291 142 6 1 217 52 340 3.70e-23 98.6
MsG0380017039.01.T01 AT5G66210 25.086 291 142 6 1 217 52 340 3.70e-23 98.6
MsG0380017039.01.T01 AT4G36070 25.461 271 128 5 1 197 61 331 4.96e-23 98.2
MsG0380017039.01.T01 AT4G36070 25.333 300 144 7 1 226 61 354 6.04e-23 98.2
MsG0380017039.01.T01 AT4G04710 29.412 238 94 6 32 197 43 278 1.46e-21 93.6
MsG0380017039.01.T01 AT3G56760 24.731 279 124 7 1 198 114 387 6.10e-20 89.4
MsG0380017039.01.T01 AT5G24430 25.275 273 128 6 1 197 133 405 6.88e-20 89.4
MsG0380017039.01.T01 AT3G50530 25.180 278 122 8 1 197 138 410 9.03e-20 89.0
MsG0380017039.01.T01 AT2G41140 24.373 279 125 7 1 198 113 386 9.78e-20 88.6
MsG0380017039.01.T01 AT3G19100 25.180 278 128 7 1 200 134 409 7.35e-19 86.3
MsG0380017039.01.T01 AT3G49370 25.455 275 125 7 1 197 132 404 5.26e-18 83.6
MsG0380017039.01.T01 AT1G49580 24.917 301 144 8 1 223 140 436 8.59e-18 83.2
MsG0380017039.01.T01 AT2G25880 28.814 236 123 7 2 198 16 245 1.14e-17 80.5
MsG0380017039.01.T01 AT4G32830 26.275 255 121 9 10 198 30 283 2.13e-14 72.0
MsG0380017039.01.T01 AT2G25880 25.095 263 130 9 2 198 16 277 1.92e-13 68.9
MsG0380017039.01.T01 AT2G25880 25.095 263 130 9 2 198 29 290 3.30e-13 68.6
MsG0380017039.01.T01 AT3G50530 30.952 126 72 4 1 113 138 261 5.38e-13 68.9
MsG0380017039.01.T01 AT1G76040 40.659 91 46 2 107 197 50 132 1.28e-11 63.9
MsG0380017039.01.T01 AT1G76040 40.659 91 46 2 107 197 50 132 1.28e-11 63.9

Find 70 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACATTTGTCTGGACATTC+TGG 0.179560 3:+91063723 MsG0380017039.01.T01:CDS
TGCTTGTAAGACTTTGAAAA+AGG 0.229619 3:+91063665 MsG0380017039.01.T01:CDS
GCGATCGGGCAAGGGAAATT+TGG 0.245407 3:+91063600 MsG0380017039.01.T01:CDS
CATCAAGTATTGTCATGATA+TGG 0.251387 3:+91063898 MsG0380017039.01.T01:CDS
CAGTTTATTTGTGCAGGTCT+AGG 0.280250 3:+91063625 MsG0380017039.01.T01:CDS
AAACCTGCAAGAGATCTTAT+AGG 0.301710 3:+91065843 MsG0380017039.01.T01:CDS
GCAGCTCGCTGTTCTGAAAA+TGG 0.338975 3:-91063849 None:intergenic
CTCCCTATAAGATCTCTTGC+AGG 0.339063 3:-91065846 None:intergenic
TCCATTTAAGGGAGATTCAT+TGG 0.352742 3:+91065752 MsG0380017039.01.T01:intron
ATTGATGATGATTATGTTAC+CGG 0.360800 3:+91063573 MsG0380017039.01.T01:CDS
GTTGATTGATCAAATGCTTA+AGG 0.391024 3:+91063821 MsG0380017039.01.T01:CDS
TTTCTTCCTAACCTAGGTTC+CGG 0.412931 3:-91066468 None:intergenic
GAGATAATGCAACATTTGTC+TGG 0.428593 3:+91063714 MsG0380017039.01.T01:CDS
ACTTCAGGTGCAACATATGC+AGG 0.428748 3:-91065653 None:intergenic
AACCTGCAAGAGATCTTATA+GGG 0.431243 3:+91065844 MsG0380017039.01.T01:CDS
AGTTTATTTGTGCAGGTCTA+GGG 0.433368 3:+91063626 MsG0380017039.01.T01:CDS
TTGGATCAGTTTATTTGTGC+AGG 0.435600 3:+91063619 MsG0380017039.01.T01:CDS
AACATTTGTCTGGACATTCT+GGG 0.440657 3:+91063724 MsG0380017039.01.T01:CDS
ATGTTACCGGTGAAGCGATC+GGG 0.442660 3:+91063586 MsG0380017039.01.T01:CDS
AGGAAGAAACATTATAGATA+TGG 0.443702 3:+91066482 MsG0380017039.01.T01:CDS
TTGTGCAGGTCTAGGGGTAG+TGG 0.444727 3:+91063633 MsG0380017039.01.T01:CDS
GTCAAATTAGATTTCCAAGC+AGG 0.458338 3:+91065801 MsG0380017039.01.T01:CDS
TAGATTTCCAAGCAGGGATG+TGG 0.461805 3:+91065808 MsG0380017039.01.T01:CDS
CTTGTCATGGAATTGTGCTC+CGG 0.465856 3:+91063792 MsG0380017039.01.T01:CDS
ATAAAATTGAAGAATCAAAC+TGG 0.465934 3:+91066417 MsG0380017039.01.T01:CDS
TCAAAACTTGACGGATTGGC+TGG 0.467263 3:+91065626 MsG0380017039.01.T01:CDS
CTTTCAATTCAGGGCATCCA+TGG 0.474747 3:+91066349 MsG0380017039.01.T01:intron
TGCTTGGAAATCTAATTTGA+CGG 0.478406 3:-91065799 None:intergenic
TACTTCATCAGCTGATATCC+TGG 0.479392 3:-91065892 None:intergenic
ATCAAGTATTGTCATGATAT+GGG 0.481044 3:+91063899 MsG0380017039.01.T01:CDS
TTGTCATGGAATTGTGCTCC+GGG 0.482524 3:+91063793 MsG0380017039.01.T01:CDS
TATCTCAGGTCAAAACTTGA+CGG 0.484786 3:+91065617 MsG0380017039.01.T01:intron
ACCGGTGAAGCGATCGGGCA+AGG 0.487298 3:+91063591 MsG0380017039.01.T01:CDS
AAGTTGCTATTCCGATGATC+AGG 0.491895 3:+91066532 MsG0380017039.01.T01:CDS
CCCTTGCCCGATCGCTTCAC+CGG 0.495165 3:-91063592 None:intergenic
TATGTTACCGGTGAAGCGAT+CGG 0.500484 3:+91063585 MsG0380017039.01.T01:CDS
CAGGTCAAAACTTGACGGAT+TGG 0.508294 3:+91065622 MsG0380017039.01.T01:intron
CAGACAGCTTGTTGCCTCAC+CGG 0.523105 3:+91066449 MsG0380017039.01.T01:CDS
TCGATTCCCACATCCCTGCT+TGG 0.530527 3:-91065815 None:intergenic
ATAATGTTTCTTCCTAACCT+AGG 0.536432 3:-91066474 None:intergenic
CCGGTGAAGCGATCGGGCAA+GGG 0.543039 3:+91063592 MsG0380017039.01.T01:CDS
ATGTTGCTACTCAGATGGGC+AGG 0.549411 3:+91063541 None:intergenic
GCCTCACCGGAACCTAGGTT+AGG 0.554457 3:+91066462 MsG0380017039.01.T01:CDS
TTGTTGCCTCACCGGAACCT+AGG 0.567531 3:+91066457 MsG0380017039.01.T01:CDS
CGCACATTCATCCTGATCAT+CGG 0.569921 3:-91066543 None:intergenic
TTGATCAATCAACCGTCCCC+CGG 0.574394 3:-91063811 None:intergenic
ACATTTGTCTGGACATTCTG+GGG 0.577932 3:+91063725 MsG0380017039.01.T01:CDS
AATGCTAACAAGGGATACTT+CGG 0.582864 3:+91065869 MsG0380017039.01.T01:CDS
GGCAACAAGCTGTCTGCTTG+TGG 0.583107 3:-91066442 None:intergenic
CAGCATCTTCATTGATTGAG+CGG 0.584103 3:-91066385 None:intergenic
TTATAGGGAGAATGCTAACA+AGG 0.584237 3:+91065859 MsG0380017039.01.T01:CDS
GATTGATCAAATGCTTAAGG+AGG 0.584700 3:+91063824 MsG0380017039.01.T01:CDS
TCAAATTAGATTTCCAAGCA+GGG 0.585416 3:+91065802 MsG0380017039.01.T01:CDS
GGAGGAGACGGTTCATCGAG+AGG 0.586955 3:+91063689 MsG0380017039.01.T01:CDS
TGAATGCTTTCATCTTGTCA+TGG 0.588616 3:+91063779 MsG0380017039.01.T01:CDS
AGATTTCCAAGCAGGGATGT+GGG 0.597773 3:+91065809 MsG0380017039.01.T01:CDS
CAGGTCTAGGGGTAGTGGAG+CGG 0.604490 3:+91063638 MsG0380017039.01.T01:CDS
TGGGGTTGTGACGTTGCAAG+CGG 0.607545 3:+91063743 MsG0380017039.01.T01:CDS
TAACAAGGGATACTTCGGCC+AGG 0.607946 3:+91065874 MsG0380017039.01.T01:CDS
GCGAGCTGCTAACACTCTCA+AGG 0.614198 3:+91063863 MsG0380017039.01.T01:CDS
ATTGATCAAATGCTTAAGGA+GGG 0.618635 3:+91063825 MsG0380017039.01.T01:CDS
GTTTATTTGTGCAGGTCTAG+GGG 0.623603 3:+91063627 MsG0380017039.01.T01:CDS
GCGGTGTAGAACAAAATCCA+TGG 0.625449 3:-91066366 None:intergenic
ATCGGAATAGCAACTTTCAG+AGG 0.632259 3:-91066525 None:intergenic
GTCATGGAATTGTGCTCCGG+GGG 0.644055 3:+91063795 MsG0380017039.01.T01:CDS
GAATAGCAACTTTCAGAGGA+CGG 0.655619 3:-91066521 None:intergenic
CTTCAGGTGCAACATATGCA+GGG 0.655708 3:-91065652 None:intergenic
TGTCATGGAATTGTGCTCCG+GGG 0.658818 3:+91063794 MsG0380017039.01.T01:CDS
TATAGGGAGAATGCTAACAA+GGG 0.664105 3:+91065860 MsG0380017039.01.T01:CDS
TCCTAACCTAGGTTCCGGTG+AGG 0.701049 3:-91066463 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATATATATCCAAATA+GGG - Chr3:91064035-91064054 None:intergenic 10.0%
!! GAAAACATAAAATAAATATA+AGG - Chr3:91066002-91066021 None:intergenic 10.0%
!!! ATTGTTAACATTTTTTTTTA+GGG + Chr3:91064189-91064208 MsG0380017039.01.T01:intron 10.0%
!! AAAAAAAAAGATGGAATATA+TGG - Chr3:91064289-91064308 None:intergenic 15.0%
!! CATGATATTAAAAAAAAAGA+TGG - Chr3:91064298-91064317 None:intergenic 15.0%
!! GAAAAAATATATATCCAAAT+AGG - Chr3:91064036-91064055 None:intergenic 15.0%
!!! ATTCTTCAATTTTATTTTGA+TGG - Chr3:91066412-91066431 None:intergenic 15.0%
!!! CATTGTTAACATTTTTTTTT+AGG + Chr3:91064188-91064207 MsG0380017039.01.T01:intron 15.0%
!!! TTCTTCAATTTTATTTTGAT+GGG - Chr3:91066411-91066430 None:intergenic 15.0%
!!! TTTGCTTTTATAAAATGTTT+TGG + Chr3:91065404-91065423 MsG0380017039.01.T01:intron 15.0%
!!! TTTTAAAAGAATATATTCTG+AGG + Chr3:91064969-91064988 MsG0380017039.01.T01:intron 15.0%
!!! TTTTAATATCATGTGTTTTT+AGG + Chr3:91064305-91064324 MsG0380017039.01.T01:intron 15.0%
!! AAAAATGTTAACAATGTCAT+AGG - Chr3:91064184-91064203 None:intergenic 20.0%
!! AAAGTAACATTATAATGTTG+GGG + Chr3:91065233-91065252 MsG0380017039.01.T01:intron 20.0%
!! ACAAAGTAACATTATAATGT+TGG + Chr3:91065231-91065250 MsG0380017039.01.T01:intron 20.0%
!! ATAAAATTGAAGAATCAAAC+TGG + Chr3:91066417-91066436 MsG0380017039.01.T01:CDS 20.0%
!! CAAAGTAACATTATAATGTT+GGG + Chr3:91065232-91065251 MsG0380017039.01.T01:intron 20.0%
!! CCAAAAACATAAAAGATAAA+TGG - Chr3:91066156-91066175 None:intergenic 20.0%
!! TAAGTTAAAATTTGTATCTC+AGG + Chr3:91065603-91065622 MsG0380017039.01.T01:intron 20.0%
!! TAATAATAAAGTAACCTCTT+TGG + Chr3:91064677-91064696 MsG0380017039.01.T01:intron 20.0%
!!! AAAGAGGTTACTTTATTATT+AGG - Chr3:91064678-91064697 None:intergenic 20.0%
!!! AAAGATGAAAAAAGTATCAT+AGG - Chr3:91066241-91066260 None:intergenic 20.0%
!!! AAGAGGTTACTTTATTATTA+GGG - Chr3:91064677-91064696 None:intergenic 20.0%
!!! ATTTTTTTTTCTACTGTTCT+TGG + Chr3:91064930-91064949 MsG0380017039.01.T01:intron 20.0%
!!! CCATTTATCTTTTATGTTTT+TGG + Chr3:91066153-91066172 MsG0380017039.01.T01:intron 20.0%
!!! TTTTTAGGAGTAAAAATGTT+AGG + Chr3:91064320-91064339 MsG0380017039.01.T01:intron 20.0%
!!! TTTTTCTTCAAAAGGTATTT+AGG - Chr3:91066264-91066283 None:intergenic 20.0%
!!! TTTTTCTTTATTATACTCTC+TGG + Chr3:91065003-91065022 MsG0380017039.01.T01:intron 20.0%
! AAGAGGTTAATCTATTAGTA+GGG - Chr3:91064582-91064601 None:intergenic 25.0%
! AAGATGGAATATATGGAAAT+TGG - Chr3:91064282-91064301 None:intergenic 25.0%
! AAGTATCATAGGTACAAAAA+GGG - Chr3:91066230-91066249 None:intergenic 25.0%
! AATATCTGTCTTTCAATTCA+GGG + Chr3:91066340-91066359 MsG0380017039.01.T01:intron 25.0%
! AGGAAGAAACATTATAGATA+TGG + Chr3:91066482-91066501 MsG0380017039.01.T01:CDS 25.0%
! CAAAGTTGACATATTTAATC+TGG + Chr3:91065538-91065557 MsG0380017039.01.T01:intron 25.0%
! GAAGAAAACCAAAATAGTAT+CGG - Chr3:91064865-91064884 None:intergenic 25.0%
! GATGTATTCATAATCTATCA+TGG - Chr3:91065928-91065947 None:intergenic 25.0%
! GATTATGAATACATCATATG+TGG + Chr3:91065933-91065952 MsG0380017039.01.T01:intron 25.0%
! TAATATCTGTCTTTCAATTC+AGG + Chr3:91066339-91066358 MsG0380017039.01.T01:intron 25.0%
! TACTAATAGATTAACCTCTT+CGG + Chr3:91064582-91064601 MsG0380017039.01.T01:intron 25.0%
! TAGTAACACTATAATGTTTG+AGG + Chr3:91065311-91065330 MsG0380017039.01.T01:intron 25.0%
! TATTATTAGGGTTTACTATG+CGG - Chr3:91064665-91064684 None:intergenic 25.0%
! TGTAAAACAAATTATCCAGT+AGG + Chr3:91064105-91064124 MsG0380017039.01.T01:intron 25.0%
!! AAAGTATCATAGGTACAAAA+AGG - Chr3:91066231-91066250 None:intergenic 25.0%
!! AAATTAAAGCTTGCAGATTT+TGG + Chr3:91063974-91063993 MsG0380017039.01.T01:intron 25.0%
!! AGATATTAGTTTAACATGCA+AGG - Chr3:91066327-91066346 None:intergenic 25.0%
!! ATCAAGTATTGTCATGATAT+GGG + Chr3:91063899-91063918 MsG0380017039.01.T01:CDS 25.0%
!! TATAATGTTTGAGGCTAATT+TGG + Chr3:91065320-91065339 MsG0380017039.01.T01:intron 25.0%
!!! ATAAAATGTTTTGGTGGTTT+GGG + Chr3:91065413-91065432 MsG0380017039.01.T01:intron 25.0%
!!! ATCGTAAATTTGCTAAATAG+TGG + Chr3:91064484-91064503 MsG0380017039.01.T01:intron 25.0%
!!! ATTGATGATGATTATGTTAC+CGG + Chr3:91063573-91063592 MsG0380017039.01.T01:CDS 25.0%
!!! GCTTTTATAAAATGTTTTGG+TGG + Chr3:91065407-91065426 MsG0380017039.01.T01:intron 25.0%
!!! TAAATTTGCTAAATAGTGGA+AGG + Chr3:91064488-91064507 MsG0380017039.01.T01:intron 25.0%
!!! TATAAAATGTTTTGGTGGTT+TGG + Chr3:91065412-91065431 MsG0380017039.01.T01:intron 25.0%
AGGAAAATCAGAATAACAGA+GGG - Chr3:91064836-91064855 None:intergenic 30.0%
ATAATGTTTCTTCCTAACCT+AGG - Chr3:91066477-91066496 None:intergenic 30.0%
ATGAATACATCATATGTGGT+TGG + Chr3:91065937-91065956 MsG0380017039.01.T01:intron 30.0%
ATTAGTAGGGTTTACTATCT+GGG - Chr3:91064569-91064588 None:intergenic 30.0%
ATTATTAGGGTTTACTATGC+GGG - Chr3:91064664-91064683 None:intergenic 30.0%
ATTGATCAAATGCTTAAGGA+GGG + Chr3:91063825-91063844 MsG0380017039.01.T01:CDS 30.0%
GAAAGAAACTTCAATTACAG+AGG - Chr3:91065966-91065985 None:intergenic 30.0%
GAAGAGGTTAATCTATTAGT+AGG - Chr3:91064583-91064602 None:intergenic 30.0%
GACTGAAGTAGTGATAATAA+AGG - Chr3:91065138-91065157 None:intergenic 30.0%
GTTGATTGATCAAATGCTTA+AGG + Chr3:91063821-91063840 MsG0380017039.01.T01:CDS 30.0%
TAAAATGAAACAATGTTGCC+CGG - Chr3:91065493-91065512 None:intergenic 30.0%
TACATAAAGACAGATTACGA+AGG - Chr3:91064089-91064108 None:intergenic 30.0%
TAGGAAAATCAGAATAACAG+AGG - Chr3:91064837-91064856 None:intergenic 30.0%
TATTAGTAGGGTTTACTATC+TGG - Chr3:91064570-91064589 None:intergenic 30.0%
TCAAATTAGATTTCCAAGCA+GGG + Chr3:91065802-91065821 MsG0380017039.01.T01:CDS 30.0%
TCAATTTATCGAACTTCCTT+GGG - Chr3:91066034-91066053 None:intergenic 30.0%
TGAATACATCATATGTGGTT+GGG + Chr3:91065938-91065957 MsG0380017039.01.T01:intron 30.0%
TGCTTGGAAATCTAATTTGA+CGG - Chr3:91065802-91065821 None:intergenic 30.0%
TTAGGAGTAAAAATGTTAGG+TGG + Chr3:91064323-91064342 MsG0380017039.01.T01:intron 30.0%
TTCAATTTATCGAACTTCCT+TGG - Chr3:91066035-91066054 None:intergenic 30.0%
! AAAACCAAAATAGTATCGGA+TGG - Chr3:91064861-91064880 None:intergenic 30.0%
! CATCAAGTATTGTCATGATA+TGG + Chr3:91063898-91063917 MsG0380017039.01.T01:CDS 30.0%
! CTGATAATTTTGCATCTTTG+AGG - Chr3:91065106-91065125 None:intergenic 30.0%
! CTTGTAAGACTTTGAAAAAG+GGG + Chr3:91063667-91063686 MsG0380017039.01.T01:CDS 30.0%
! GCTTGTAAGACTTTGAAAAA+GGG + Chr3:91063666-91063685 MsG0380017039.01.T01:CDS 30.0%
! TCTTTGGAGGATTAAATTGA+TGG + Chr3:91065381-91065400 MsG0380017039.01.T01:intron 30.0%
! TGCTTGTAAGACTTTGAAAA+AGG + Chr3:91063665-91063684 MsG0380017039.01.T01:CDS 30.0%
! TTGTAAGACTTTGAAAAAGG+GGG + Chr3:91063668-91063687 MsG0380017039.01.T01:CDS 30.0%
!! ATTACCTTCTGAAATTCTCA+TGG - Chr3:91064005-91064024 None:intergenic 30.0%
!! TACTCTGAGAAGTTGATATA+TGG + Chr3:91065689-91065708 MsG0380017039.01.T01:intron 30.0%
!! TTAGTAAGCTTGTTGTAACT+AGG - Chr3:91066064-91066083 None:intergenic 30.0%
!!! TCTGCTGTTTTTTCTTCAAA+AGG - Chr3:91066272-91066291 None:intergenic 30.0%
AAACCTGCAAGAGATCTTAT+AGG + Chr3:91065843-91065862 MsG0380017039.01.T01:CDS 35.0%
AACAGAATACTTGCAAGAGT+TGG - Chr3:91064370-91064389 None:intergenic 35.0%
AACATTTGTCTGGACATTCT+GGG + Chr3:91063724-91063743 MsG0380017039.01.T01:CDS 35.0%
AACCTGCAAGAGATCTTATA+GGG + Chr3:91065844-91065863 MsG0380017039.01.T01:CDS 35.0%
AAGAGTTTAGATGAGTGATC+AGG - Chr3:91064733-91064752 None:intergenic 35.0%
AATATTCTGCTCACGAAATC+GGG + Chr3:91063950-91063969 MsG0380017039.01.T01:intron 35.0%
AATGCTAACAAGGGATACTT+CGG + Chr3:91065869-91065888 MsG0380017039.01.T01:CDS 35.0%
ACTCAATAGTATGCACTAGA+CGG - Chr3:91064618-91064637 None:intergenic 35.0%
AGTTTATTTGTGCAGGTCTA+GGG + Chr3:91063626-91063645 MsG0380017039.01.T01:CDS 35.0%
ATGAATCTCCCTTAAATGGA+AGG - Chr3:91065752-91065771 None:intergenic 35.0%
CAATACAGATACATACCTAC+TGG - Chr3:91064123-91064142 None:intergenic 35.0%
CATCATCAATCAAGAGACAT+GGG - Chr3:91066102-91066121 None:intergenic 35.0%
CGAACTTTGTCAGAAAATAG+AGG - Chr3:91064783-91064802 None:intergenic 35.0%
GAATATTCTGCTCACGAAAT+CGG + Chr3:91063949-91063968 MsG0380017039.01.T01:intron 35.0%
GAGATAATGCAACATTTGTC+TGG + Chr3:91063714-91063733 MsG0380017039.01.T01:CDS 35.0%
GATTGATCAAATGCTTAAGG+AGG + Chr3:91063824-91063843 MsG0380017039.01.T01:CDS 35.0%
GGTAATATGCAAACCCTATT+TGG + Chr3:91064019-91064038 MsG0380017039.01.T01:intron 35.0%
GTCAAATTAGATTTCCAAGC+AGG + Chr3:91065801-91065820 MsG0380017039.01.T01:CDS 35.0%
TAATGTGTCACAATGACATG+TGG - Chr3:91064423-91064442 None:intergenic 35.0%
TAGAACAGTGAATCTGTTCA+TGG + Chr3:91066176-91066195 MsG0380017039.01.T01:intron 35.0%
TATAGGGAGAATGCTAACAA+GGG + Chr3:91065860-91065879 MsG0380017039.01.T01:CDS 35.0%
TATCTCAGGTCAAAACTTGA+CGG + Chr3:91065617-91065636 MsG0380017039.01.T01:intron 35.0%
TCCAATGAATCTCCCTTAAA+TGG - Chr3:91065756-91065775 None:intergenic 35.0%
TCCATTTAAGGGAGATTCAT+TGG + Chr3:91065752-91065771 MsG0380017039.01.T01:intron 35.0%
TGAATCTCCCTTAAATGGAA+GGG - Chr3:91065751-91065770 None:intergenic 35.0%
TGAATGCTTTCATCTTGTCA+TGG + Chr3:91063779-91063798 MsG0380017039.01.T01:CDS 35.0%
TTATAGGGAGAATGCTAACA+AGG + Chr3:91065859-91065878 MsG0380017039.01.T01:CDS 35.0%
TTGAGCTTCACATGTTCTTA+TGG + Chr3:91065467-91065486 MsG0380017039.01.T01:intron 35.0%
TTGGATCAGTTTATTTGTGC+AGG + Chr3:91063619-91063638 MsG0380017039.01.T01:CDS 35.0%
! ATTTGCTAAATAGTGGAAGG+AGG + Chr3:91064491-91064510 MsG0380017039.01.T01:intron 35.0%
! CAAAATAGTATCGGATGGAT+AGG - Chr3:91064856-91064875 None:intergenic 35.0%
! CTATCCATCCGATACTATTT+TGG + Chr3:91064854-91064873 MsG0380017039.01.T01:intron 35.0%
!! ATCTGGGTCATGTGTTTTTA+TGG - Chr3:91064553-91064572 None:intergenic 35.0%
!! CTCTTGATTGATGATGGTTA+TGG + Chr3:91066106-91066125 MsG0380017039.01.T01:intron 35.0%
!!! TTCATTGGAAGCTGTTTTTG+AGG + Chr3:91065767-91065786 MsG0380017039.01.T01:CDS 35.0%
ACATTTGTCTGGACATTCTG+GGG + Chr3:91063725-91063744 MsG0380017039.01.T01:CDS 40.0%
AGTCACTGAATTTCTCCATG+CGG - Chr3:91065163-91065182 None:intergenic 40.0%
AGTTTAGATGAGTGATCAGG+AGG - Chr3:91064730-91064749 None:intergenic 40.0%
ATCGGAATAGCAACTTTCAG+AGG - Chr3:91066528-91066547 None:intergenic 40.0%
ATTTCCTTGAGGGGCTAATT+TGG + Chr3:91065265-91065284 MsG0380017039.01.T01:intron 40.0%
CAACAGTGACATTGTCATAC+TGG + Chr3:91065051-91065070 MsG0380017039.01.T01:intron 40.0%
CAACATTTGTCTGGACATTC+TGG + Chr3:91063723-91063742 MsG0380017039.01.T01:CDS 40.0%
CAGTATGACAATGTCACTGT+TGG - Chr3:91065053-91065072 None:intergenic 40.0%
CAGTTTATTTGTGCAGGTCT+AGG + Chr3:91063625-91063644 MsG0380017039.01.T01:CDS 40.0%
CATTTCCTTGAGGGCTAATT+TGG + Chr3:91065187-91065206 MsG0380017039.01.T01:intron 40.0%
CCATCATCAATCAAGAGACA+TGG - Chr3:91066103-91066122 None:intergenic 40.0%
CCATGTCTCTTGATTGATGA+TGG + Chr3:91066100-91066119 MsG0380017039.01.T01:intron 40.0%
CTAATCTGCATTTCCTTGAG+GGG + Chr3:91065256-91065275 MsG0380017039.01.T01:intron 40.0%
GAATAGCAACTTTCAGAGGA+CGG - Chr3:91066524-91066543 None:intergenic 40.0%
GAGGAACTAAGTGGTGATAA+TGG - Chr3:91065087-91065106 None:intergenic 40.0%
GCTAATCTGCATTTCCTTGA+GGG + Chr3:91065255-91065274 MsG0380017039.01.T01:intron 40.0%
GTTTAGATGAGTGATCAGGA+GGG - Chr3:91064729-91064748 None:intergenic 40.0%
GTTTATTTGTGCAGGTCTAG+GGG + Chr3:91063627-91063646 MsG0380017039.01.T01:CDS 40.0%
TACTTCATCAGCTGATATCC+TGG - Chr3:91065895-91065914 None:intergenic 40.0%
TATGACAATGTCACTGTTGG+CGG - Chr3:91065050-91065069 None:intergenic 40.0%
TATTTGCCCGACAATACTTC+AGG - Chr3:91065671-91065690 None:intergenic 40.0%
TGACTACTGCATTTCCTTGA+GGG + Chr3:91065178-91065197 MsG0380017039.01.T01:intron 40.0%
TGTGGCAACATTCTGATCTT+TGG + Chr3:91065365-91065384 MsG0380017039.01.T01:intron 40.0%
TTCGTGAGCAGAATATTCTC+AGG - Chr3:91063947-91063966 None:intergenic 40.0%
TTTAGATGAGTGATCAGGAG+GGG - Chr3:91064728-91064747 None:intergenic 40.0%
TTTCACCAAATTAGCCCTCA+AGG - Chr3:91065195-91065214 None:intergenic 40.0%
TTTCTTCCTAACCTAGGTTC+CGG - Chr3:91066471-91066490 None:intergenic 40.0%
! AAGTTGCTATTCCGATGATC+AGG + Chr3:91066532-91066551 MsG0380017039.01.T01:CDS 40.0%
! CAGCATCTTCATTGATTGAG+CGG - Chr3:91066388-91066407 None:intergenic 40.0%
! TAAGACTTTGAAAAAGGGGG+AGG + Chr3:91063671-91063690 MsG0380017039.01.T01:CDS 40.0%
! TGCATCTTTGAGGAACTAAG+TGG - Chr3:91065096-91065115 None:intergenic 40.0%
! TTTGAGGCTAATTTGGTCAG+AGG + Chr3:91065327-91065346 MsG0380017039.01.T01:intron 40.0%
!! AGTGGTGATAATGGTTTCAG+AGG - Chr3:91065078-91065097 None:intergenic 40.0%
!! ATGTGTTTTTATGGACGGGT+CGG - Chr3:91064544-91064563 None:intergenic 40.0%
!! ATTTGGTCAGAGGTGTTTGA+AGG + Chr3:91065337-91065356 MsG0380017039.01.T01:intron 40.0%
!! GAAGTTGATATATGGAGTGC+TGG + Chr3:91065697-91065716 MsG0380017039.01.T01:intron 40.0%
!! GGGTCATGTGTTTTTATGGA+CGG - Chr3:91064549-91064568 None:intergenic 40.0%
!! GGTCATGTGTTTTTATGGAC+GGG - Chr3:91064548-91064567 None:intergenic 40.0%
!! TGTTGCACCTGAAGTATTGT+CGG + Chr3:91065661-91065680 MsG0380017039.01.T01:intron 40.0%
!! TTTGGTCAGAGGTGTTTGAA+GGG + Chr3:91065338-91065357 MsG0380017039.01.T01:intron 40.0%
AAATGGACACAGCAGTACAG+AGG - Chr3:91066139-91066158 None:intergenic 45.0%
AACAGAGGGAATGAAGAACG+AGG - Chr3:91064822-91064841 None:intergenic 45.0%
AATGGACACAGCAGTACAGA+GGG - Chr3:91066138-91066157 None:intergenic 45.0%
ACTTCAGGTGCAACATATGC+AGG - Chr3:91065656-91065675 None:intergenic 45.0%
AGATTTCCAAGCAGGGATGT+GGG + Chr3:91065809-91065828 MsG0380017039.01.T01:CDS 45.0%
CATCATAGACTGTGCGACTT+TGG + Chr3:91064233-91064252 MsG0380017039.01.T01:intron 45.0%
CGCACATTCATCCTGATCAT+CGG - Chr3:91066546-91066565 None:intergenic 45.0%
CTCCCTATAAGATCTCTTGC+AGG - Chr3:91065849-91065868 None:intergenic 45.0%
CTCGCCATGAGAATTTCAGA+AGG + Chr3:91063998-91064017 MsG0380017039.01.T01:intron 45.0%
CTTCACATGTTCTTATGGCC+GGG + Chr3:91065472-91065491 MsG0380017039.01.T01:intron 45.0%
CTTCAGGTGCAACATATGCA+GGG - Chr3:91065655-91065674 None:intergenic 45.0%
CTTGTCATGGAATTGTGCTC+CGG + Chr3:91063792-91063811 MsG0380017039.01.T01:CDS 45.0%
GAACTTCCTTGGGAGTAGTT+GGG - Chr3:91066024-91066043 None:intergenic 45.0%
GCGGTGTAGAACAAAATCCA+TGG - Chr3:91066369-91066388 None:intergenic 45.0%
GCTTCACATGTTCTTATGGC+CGG + Chr3:91065471-91065490 MsG0380017039.01.T01:intron 45.0%
GGCAACATTCTGATCTTTGG+AGG + Chr3:91065368-91065387 MsG0380017039.01.T01:intron 45.0%
GGCTAATCTGCATTTCCTTG+AGG + Chr3:91065254-91065273 MsG0380017039.01.T01:intron 45.0%
GGTTGCTCCCTTCCATTTAA+GGG + Chr3:91065741-91065760 MsG0380017039.01.T01:intron 45.0%
GGTTTACTATGCGGGTTTGA+TGG - Chr3:91064656-91064675 None:intergenic 45.0%
GTGACTACTGCATTTCCTTG+AGG + Chr3:91065177-91065196 MsG0380017039.01.T01:intron 45.0%
TAGATTTCCAAGCAGGGATG+TGG + Chr3:91065808-91065827 MsG0380017039.01.T01:CDS 45.0%
TAGTGGAAGGAGGTAGTTGA+TGG + Chr3:91064501-91064520 MsG0380017039.01.T01:intron 45.0%
TATGTTACCGGTGAAGCGAT+CGG + Chr3:91063585-91063604 MsG0380017039.01.T01:CDS 45.0%
TGGTTGCTCCCTTCCATTTA+AGG + Chr3:91065740-91065759 MsG0380017039.01.T01:intron 45.0%
TGTGTCACAATGACATGTGG+AGG - Chr3:91064420-91064439 None:intergenic 45.0%
TTCACCAAATTAGCCCCTCA+AGG - Chr3:91065272-91065291 None:intergenic 45.0%
TTGTCATGGAATTGTGCTCC+GGG + Chr3:91063793-91063812 MsG0380017039.01.T01:CDS 45.0%
TTTGAAAAAGGGGGAGGAGA+CGG + Chr3:91063677-91063696 MsG0380017039.01.T01:CDS 45.0%
! AGGTGTTTGAAGGGTTAGTG+TGG + Chr3:91065347-91065366 MsG0380017039.01.T01:intron 45.0%
! ATACTTGCAAGAGTTGGCCT+TGG - Chr3:91064364-91064383 None:intergenic 45.0%
! CAGGTCAAAACTTGACGGAT+TGG + Chr3:91065622-91065641 MsG0380017039.01.T01:intron 45.0%
! CTTTCAATTCAGGGCATCCA+TGG + Chr3:91066349-91066368 MsG0380017039.01.T01:intron 45.0%
! GGTTTCATTTTGCACTGCCA+AGG + Chr3:91064344-91064363 MsG0380017039.01.T01:intron 45.0%
! TGGTTTGGGACTAGGTCATA+GGG + Chr3:91065427-91065446 MsG0380017039.01.T01:intron 45.0%
! TGTTTTCCCAACTACTCCCA+AGG + Chr3:91066015-91066034 MsG0380017039.01.T01:intron 45.0%
!! GTTGCACCTGAAGTATTGTC+GGG + Chr3:91065662-91065681 MsG0380017039.01.T01:intron 45.0%
!! TCAAAACTTGACGGATTGGC+TGG + Chr3:91065626-91065645 MsG0380017039.01.T01:CDS 45.0%
!!! TGTTTTGGTGGTTTGGGACT+AGG + Chr3:91065419-91065438 MsG0380017039.01.T01:intron 45.0%
AGTGCTCATGCATGCTCTGT+TGG + Chr3:91065720-91065739 MsG0380017039.01.T01:intron 50.0%
ATGGACACAGCAGTACAGAG+GGG - Chr3:91066137-91066156 None:intergenic 50.0%
ATGTTACCGGTGAAGCGATC+GGG + Chr3:91063586-91063605 MsG0380017039.01.T01:CDS 50.0%
CACTACTTCAGTCATCCGCA+TGG + Chr3:91065145-91065164 MsG0380017039.01.T01:intron 50.0%
CAGAAAATAGAGGTCGCCGA+AGG - Chr3:91064773-91064792 None:intergenic 50.0%
CGAACTTCCTTGGGAGTAGT+TGG - Chr3:91066025-91066044 None:intergenic 50.0%
GAAGAACGAGGAGAAGTTGC+TGG - Chr3:91064810-91064829 None:intergenic 50.0%
TAACAAGGGATACTTCGGCC+AGG + Chr3:91065874-91065893 MsG0380017039.01.T01:CDS 50.0%
TCGACGGTAAAGAGCCAAAG+AGG - Chr3:91064694-91064713 None:intergenic 50.0%
TGTCATGGAATTGTGCTCCG+GGG + Chr3:91063794-91063813 MsG0380017039.01.T01:CDS 50.0%
TTGATCAATCAACCGTCCCC+CGG - Chr3:91063814-91063833 None:intergenic 50.0%
! ATGTCACTGTTGGCGGATGA+TGG - Chr3:91065043-91065062 None:intergenic 50.0%
! GTGGTTTGGGACTAGGTCAT+AGG + Chr3:91065426-91065445 MsG0380017039.01.T01:intron 50.0%
! GTTTTTATGGACGGGTCGGT+GGG - Chr3:91064540-91064559 None:intergenic 50.0%
! TGTTGGCGGATGATGGTTCA+CGG - Chr3:91065036-91065055 None:intergenic 50.0%
!! GCAGCTCGCTGTTCTGAAAA+TGG - Chr3:91063852-91063871 None:intergenic 50.0%
!! GGTTTGATGGCGCAAGTACA+AGG - Chr3:91064643-91064662 None:intergenic 50.0%
!! TGTTTTTATGGACGGGTCGG+TGG - Chr3:91064541-91064560 None:intergenic 50.0%
ACGGAGCTGAAAAGCCGAAG+AGG - Chr3:91064599-91064618 None:intergenic 55.0%
ACTCTTCAGCCGATGAGCTG+TGG + Chr3:91064747-91064766 MsG0380017039.01.T01:intron 55.0%
AGGGGCTGTTCGAAGTTCGA+CGG - Chr3:91064710-91064729 None:intergenic 55.0%
GCGAGCTGCTAACACTCTCA+AGG + Chr3:91063863-91063882 MsG0380017039.01.T01:CDS 55.0%
GCGATCGGGCAAGGGAAATT+TGG + Chr3:91063600-91063619 MsG0380017039.01.T01:CDS 55.0%
GGCAACAAGCTGTCTGCTTG+TGG - Chr3:91066445-91066464 None:intergenic 55.0%
GTCATGGAATTGTGCTCCGG+GGG + Chr3:91063795-91063814 MsG0380017039.01.T01:CDS 55.0%
TCCTAACCTAGGTTCCGGTG+AGG - Chr3:91066466-91066485 None:intergenic 55.0%
TCGATTCCCACATCCCTGCT+TGG - Chr3:91065818-91065837 None:intergenic 55.0%
TGGGGTTGTGACGTTGCAAG+CGG + Chr3:91063743-91063762 MsG0380017039.01.T01:CDS 55.0%
TTGTGCAGGTCTAGGGGTAG+TGG + Chr3:91063633-91063652 MsG0380017039.01.T01:CDS 55.0%
TTGTTGCCTCACCGGAACCT+AGG + Chr3:91066457-91066476 MsG0380017039.01.T01:CDS 55.0%
!! CAGACAGCTTGTTGCCTCAC+CGG + Chr3:91066449-91066468 MsG0380017039.01.T01:CDS 55.0%
AGCCGATGAGCTGTGGCCTT+CGG + Chr3:91064754-91064773 MsG0380017039.01.T01:intron 60.0%
GCCTCACCGGAACCTAGGTT+AGG + Chr3:91066462-91066481 MsG0380017039.01.T01:CDS 60.0%
GGAGGAGACGGTTCATCGAG+AGG + Chr3:91063689-91063708 MsG0380017039.01.T01:CDS 60.0%
TGGAATTGTGCTCCGGGGGA+CGG + Chr3:91063799-91063818 MsG0380017039.01.T01:CDS 60.0%
!! CAGGTCTAGGGGTAGTGGAG+CGG + Chr3:91063638-91063657 MsG0380017039.01.T01:CDS 60.0%
ACCGGTGAAGCGATCGGGCA+AGG + Chr3:91063591-91063610 MsG0380017039.01.T01:CDS 65.0%
CCCTTGCCCGATCGCTTCAC+CGG - Chr3:91063595-91063614 None:intergenic 65.0%
CCGGTGAAGCGATCGGGCAA+GGG + Chr3:91063592-91063611 MsG0380017039.01.T01:CDS 65.0%
CGCCGAAGGCCACAGCTCAT+CGG - Chr3:91064759-91064778 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 91063555 91066569 91063555 ID=MsG0380017039.01;Name=MsG0380017039.01
Chr3 mRNA 91063555 91066569 91063555 ID=MsG0380017039.01.T01;Parent=MsG0380017039.01;Name=MsG0380017039.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0|0|1|1|1|4|0|261
Chr3 exon 91063555 91063925 91063555 ID=MsG0380017039.01.T01:exon:5178;Parent=MsG0380017039.01.T01
Chr3 exon 91065625 91065673 91065625 ID=MsG0380017039.01.T01:exon:5179;Parent=MsG0380017039.01.T01
Chr3 exon 91065762 91065918 91065762 ID=MsG0380017039.01.T01:exon:5180;Parent=MsG0380017039.01.T01
Chr3 exon 91066361 91066569 91066361 ID=MsG0380017039.01.T01:exon:5181;Parent=MsG0380017039.01.T01
Chr3 CDS 91063555 91063925 91063555 ID=MsG0380017039.01.T01:cds;Parent=MsG0380017039.01.T01
Chr3 CDS 91065625 91065673 91065625 ID=MsG0380017039.01.T01:cds;Parent=MsG0380017039.01.T01
Chr3 CDS 91065762 91065918 91065762 ID=MsG0380017039.01.T01:cds;Parent=MsG0380017039.01.T01
Chr3 CDS 91066361 91066569 91066361 ID=MsG0380017039.01.T01:cds;Parent=MsG0380017039.01.T01
Gene Sequence

>MsG0380017039.01.T01

ATGGGCAGGAAGAAGAAGATTGATGATGATTATGTTACCGGTGAAGCGATCGGGCAAGGGAAATTTGGATCAGTTTATTTGTGCAGGTCTAGGGGTAGTGGAGCGGAGTATGCTTGTAAGACTTTGAAAAAGGGGGAGGAGACGGTTCATCGAGAGGTTGAGATAATGCAACATTTGTCTGGACATTCTGGGGTTGTGACGTTGCAAGCGGTTTATGAAGAAGCTGAATGCTTTCATCTTGTCATGGAATTGTGCTCCGGGGGACGGTTGATTGATCAAATGCTTAAGGAGGGTCCATTTTCAGAACAGCGAGCTGCTAACACTCTCAAGGAAGTGATGTTGTCATCAAGTATTGTCATGATATGGGAGTTGTCAAAACTTGACGGATTGGCTGGAAGCCCTGCATATGTTGCACCTGAAGGAGATTCATTGGAAGCTGTTTTTGAGGCTATTAAGACCGTCAAATTAGATTTCCAAGCAGGGATGTGGGAATCGATATCTAAACCTGCAAGAGATCTTATAGGGAGAATGCTAACAAGGGATACTTCGGCCAGGATATCAGCTGATGAAGTACTTAGGCATCCATGGATTTTGTTCTACACCGCTCAATCAATGAAGATGCTGCCCATCAAAATAAAATTGAAGAATCAAACTGGTGCCACAAGCAGACAGCTTGTTGCCTCACCGGAACCTAGGTTAGGAAGAAACATTATAGATATGGCTCAGTTAGCGAGCTTCCGTCCTCTGAAAGTTGCTATTCCGATGATCAGGATGAATGTGCGTTGA

Protein sequence

>MsG0380017039.01.T01

MGRKKKIDDDYVTGEAIGQGKFGSVYLCRSRGSGAEYACKTLKKGEETVHREVEIMQHLSGHSGVVTLQAVYEEAECFHLVMELCSGGRLIDQMLKEGPFSEQRAANTLKEVMLSSSIVMIWELSKLDGLAGSPAYVAPEGDSLEAVFEAIKTVKLDFQAGMWESISKPARDLIGRMLTRDTSARISADEVLRHPWILFYTAQSMKMLPIKIKLKNQTGATSRQLVASPEPRLGRNIIDMAQLASFRPLKVAIPMIRMNVR*