AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027345.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027345.01.T01 MTR_5g055210 89.213 686 31 3 1 644 1 685 0.0 1211
MsG0580027345.01.T01 MTR_5g055210 88.276 580 26 2 107 644 1 580 0.0 1013
MsG0580027345.01.T01 MTR_5g055210 95.418 502 22 1 144 644 1 502 0.0 964
MsG0580027345.01.T01 MTR_2g026390 34.921 441 255 10 113 539 159 581 1.70e-71 245
MsG0580027345.01.T01 MTR_3g058500 33.661 407 227 9 121 509 165 546 4.17e-64 224
MsG0580027345.01.T01 MTR_3g058500 43.038 79 40 1 24 97 8 86 6.27e-12 69.3
MsG0580027345.01.T01 MTR_1g084210 30.872 149 82 4 347 493 55 184 1.69e-11 64.3
MsG0580027345.01.T02 MTR_5g055210 89.213 686 31 3 1 644 1 685 0.0 1211
MsG0580027345.01.T02 MTR_5g055210 88.276 580 26 2 107 644 1 580 0.0 1013
MsG0580027345.01.T02 MTR_5g055210 95.418 502 22 1 144 644 1 502 0.0 964
MsG0580027345.01.T02 MTR_2g026390 34.921 441 255 10 113 539 159 581 1.70e-71 245
MsG0580027345.01.T02 MTR_3g058500 33.661 407 227 9 121 509 165 546 4.17e-64 224
MsG0580027345.01.T02 MTR_3g058500 43.038 79 40 1 24 97 8 86 6.27e-12 69.3
MsG0580027345.01.T02 MTR_1g084210 30.872 149 82 4 347 493 55 184 1.69e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027345.01.T01 AT1G68580 40.351 627 291 16 7 577 1 600 5.51e-132 402
MsG0580027345.01.T01 AT1G68580 41.284 545 244 12 7 501 1 519 2.90e-122 373
MsG0580027345.01.T01 AT1G68580 45.085 468 228 11 121 577 55 504 3.46e-119 366
MsG0580027345.01.T01 AT1G68580 45.085 468 228 11 121 577 105 554 1.39e-118 366
MsG0580027345.01.T01 AT1G68580 47.409 386 181 7 121 501 55 423 1.32e-109 337
MsG0580027345.01.T01 AT5G55600 32.346 439 248 12 120 538 168 577 5.52e-59 210
MsG0580027345.01.T01 AT5G55600 41.304 92 47 2 19 103 3 94 4.34e-12 69.7
MsG0580027345.01.T01 AT5G55600 32.346 439 248 12 120 538 168 577 5.52e-59 210
MsG0580027345.01.T01 AT5G55600 41.304 92 47 2 19 103 3 94 4.34e-12 69.7
MsG0580027345.01.T01 AT5G55600 32.346 439 248 12 120 538 168 577 5.52e-59 210
MsG0580027345.01.T01 AT5G55600 41.304 92 47 2 19 103 3 94 4.34e-12 69.7
MsG0580027345.01.T01 AT4G17330 31.609 174 91 6 337 494 1564 1725 1.37e-15 81.6
MsG0580027345.01.T01 AT4G17330 31.609 174 91 6 337 494 1564 1725 1.37e-15 81.6
MsG0580027345.01.T01 AT4G17330 31.609 174 91 6 337 494 1529 1690 1.54e-15 81.6
MsG0580027345.01.T01 AT1G26540 31.973 147 77 5 354 494 14 143 1.32e-11 68.2
MsG0580027345.01.T01 AT1G11420 34.416 154 71 7 354 500 13 143 1.72e-11 67.8
MsG0580027345.01.T01 AT1G09320 33.136 169 84 6 335 492 26 176 2.36e-11 67.0
MsG0580027345.01.T01 AT1G09320 30.464 151 84 4 344 492 217 348 6.22e-11 65.9
MsG0580027345.01.T02 AT1G68580 40.351 627 291 16 7 577 1 600 5.51e-132 402
MsG0580027345.01.T02 AT1G68580 41.284 545 244 12 7 501 1 519 2.90e-122 373
MsG0580027345.01.T02 AT1G68580 45.085 468 228 11 121 577 55 504 3.46e-119 366
MsG0580027345.01.T02 AT1G68580 45.085 468 228 11 121 577 105 554 1.39e-118 366
MsG0580027345.01.T02 AT1G68580 47.409 386 181 7 121 501 55 423 1.32e-109 337
MsG0580027345.01.T02 AT5G55600 32.346 439 248 12 120 538 168 577 5.52e-59 210
MsG0580027345.01.T02 AT5G55600 41.304 92 47 2 19 103 3 94 4.34e-12 69.7
MsG0580027345.01.T02 AT5G55600 32.346 439 248 12 120 538 168 577 5.52e-59 210
MsG0580027345.01.T02 AT5G55600 41.304 92 47 2 19 103 3 94 4.34e-12 69.7
MsG0580027345.01.T02 AT5G55600 32.346 439 248 12 120 538 168 577 5.52e-59 210
MsG0580027345.01.T02 AT5G55600 41.304 92 47 2 19 103 3 94 4.34e-12 69.7
MsG0580027345.01.T02 AT4G17330 31.609 174 91 6 337 494 1564 1725 1.37e-15 81.6
MsG0580027345.01.T02 AT4G17330 31.609 174 91 6 337 494 1564 1725 1.37e-15 81.6
MsG0580027345.01.T02 AT4G17330 31.609 174 91 6 337 494 1529 1690 1.54e-15 81.6
MsG0580027345.01.T02 AT1G26540 31.973 147 77 5 354 494 14 143 1.32e-11 68.2
MsG0580027345.01.T02 AT1G11420 34.416 154 71 7 354 500 13 143 1.72e-11 67.8
MsG0580027345.01.T02 AT1G09320 33.136 169 84 6 335 492 26 176 2.36e-11 67.0
MsG0580027345.01.T02 AT1G09320 30.464 151 84 4 344 492 217 348 6.22e-11 65.9

Find 82 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACATTGGCTTTGACTTTA+GGG 0.176708 5:-58777674 MsG0580027345.01.T01:three_prime_UTR
CCAACATTGGCTTTGACTTT+AGG 0.207548 5:-58777675 MsG0580027345.01.T01:three_prime_UTR
CAAATCAACTGTAGCATCTA+TGG 0.214796 5:-58778356 MsG0580027345.01.T01:CDS
TGAATACAATATAACAAAAC+TGG 0.279705 5:+58777495 None:intergenic
TAACATAGGTGCTAGTCTTT+TGG 0.285295 5:-58777822 MsG0580027345.01.T01:three_prime_UTR
GCCACTTCGATTCCTCTTCC+TGG 0.294327 5:+58778204 None:intergenic
TTTGCTGTCCTCAGATTTGC+AGG 0.317388 5:+58778375 None:intergenic
GATGATGCCTGCATAAGTTT+TGG 0.351627 5:-58777724 MsG0580027345.01.T01:three_prime_UTR
GGCAGGACTGTTTAATTTAG+TGG 0.352512 5:-58777703 MsG0580027345.01.T01:three_prime_UTR
GGTAAAACTTATATTATCAT+TGG 0.379879 5:+58777598 None:intergenic
ACTTGAGGCATTCTCGAGAT+TGG 0.383102 5:-58778480 MsG0580027345.01.T01:CDS
AAAACATCCTTCACAAGATC+TGG 0.403992 5:+58778253 None:intergenic
ACTAAAACAAGATAACTAGA+AGG 0.407365 5:+58777795 None:intergenic
AGGCATCATCCTTGCTTCCT+AGG 0.410713 5:+58777737 None:intergenic
GAAGAACCCGAGTAAGTATC+AGG 0.414293 5:+58778310 None:intergenic
GGCATCATCCTTGCTTCCTA+GGG 0.416742 5:+58777738 None:intergenic
GCCCATGCATTGTGTAACTT+TGG 0.423958 5:-58777621 MsG0580027345.01.T01:three_prime_UTR
AAAAGACTAGCACCTATGTT+AGG 0.430605 5:+58777824 None:intergenic
TGTGGTTTCAGCTTCATTGA+AGG 0.438456 5:-58778098 MsG0580027345.01.T01:CDS
AGGCATTCTCGAGATTGGAC+TGG 0.463048 5:-58778475 MsG0580027345.01.T01:CDS
GGCATTCTCGAGATTGGACT+GGG 0.468500 5:-58778474 MsG0580027345.01.T01:CDS
ATTGCATCAAGTCAGCATTC+CGG 0.479290 5:+58777451 None:intergenic
TTACTCGGGTTCTTCTGAAA+AGG 0.491451 5:-58778302 MsG0580027345.01.T01:CDS
TCTCGAGATTGGACTGGGAA+TGG 0.492529 5:-58778469 MsG0580027345.01.T01:CDS
GCAATACAAGTCACAACATC+AGG 0.497975 5:+58778424 None:intergenic
GAGATTGGACTGGGAATGGA+TGG 0.498138 5:-58778465 MsG0580027345.01.T01:CDS
GGCCAAAGTTACACAATGCA+TGG 0.499526 5:+58777619 None:intergenic
TGGGAGATGGAATACAATCT+AGG 0.504917 5:-58778336 MsG0580027345.01.T01:CDS
GACTGGGAATGGATGGGTAA+AGG 0.505057 5:-58778458 MsG0580027345.01.T01:CDS
TTTAGTGGAATAACCAACAT+TGG 0.508698 5:-58777688 MsG0580027345.01.T01:three_prime_UTR
CGAGAATGCCTCAAGTTACA+TGG 0.511581 5:+58778487 None:intergenic
CACGACTGAGGAACTGAAAA+GGG 0.512623 5:+58778039 None:intergenic
GCACGACTGAGGAACTGAAA+AGG 0.515664 5:+58778038 None:intergenic
AGTTAAGGTGGAAGTCATCC+AGG 0.525937 5:-58778222 MsG0580027345.01.T01:CDS
AATACTGTGTTTCTGCTAAG+TGG 0.527557 5:+58777919 None:intergenic
GAATACAATATAACAAAACT+GGG 0.533135 5:+58777496 None:intergenic
CTAGGGCTTCAAATAAAATG+AGG 0.538796 5:+58777755 None:intergenic
AACTAGGACGATTCCACCAT+GGG 0.539841 5:+58777338 None:intergenic
GAATGGATGGGTAAAGGTGA+GGG 0.541939 5:-58778452 MsG0580027345.01.T01:CDS
AGTCCTGCCAAAACTTATGC+AGG 0.544229 5:+58777717 None:intergenic
ACTGTAGCATCTATGGGAGA+TGG 0.548639 5:-58778349 MsG0580027345.01.T01:CDS
AAGAAAACAAGGCACAAGAA+AGG 0.549533 5:+58777577 None:intergenic
ATTTGAAGCCCTAGGAAGCA+AGG 0.551675 5:-58777746 MsG0580027345.01.T01:three_prime_UTR
TAGGCAGCCTGATACTTACT+CGG 0.552436 5:-58778317 MsG0580027345.01.T01:CDS
ATACTGTGTTTCTGCTAAGT+GGG 0.556829 5:+58777920 None:intergenic
GCCAAAGTTACACAATGCAT+GGG 0.565270 5:+58777620 None:intergenic
TGACGAAACCATGAGAAAAG+AGG 0.568102 5:+58777858 None:intergenic
ATTGGCTTTGACTTTAGGGA+TGG 0.568643 5:-58777670 MsG0580027345.01.T01:three_prime_UTR
GGTGGAAGTCATCCAGGAAG+AGG 0.569070 5:-58778216 MsG0580027345.01.T01:CDS
CTGACTTGATGCAATCTCAA+AGG 0.570695 5:-58777443 MsG0580027345.01.T01:intron
GATGGGTAAAGGTGAGGGAA+AGG 0.570981 5:-58778447 MsG0580027345.01.T01:CDS
CCTAAAGTCAAAGCCAATGT+TGG 0.571783 5:+58777675 None:intergenic
GGAATGGATGGGTAAAGGTG+AGG 0.573465 5:-58778453 MsG0580027345.01.T01:CDS
GCATCAGACTGCAGAAACTT+CGG 0.573906 5:+58778133 None:intergenic
AACAGAGCAATGACATACAT+AGG 0.575434 5:-58778165 MsG0580027345.01.T01:CDS
AAATCAACTGTAGCATCTAT+GGG 0.576521 5:-58778355 MsG0580027345.01.T01:CDS
ATGAGAAAAGAGGCATCGAA+TGG 0.580890 5:+58777868 None:intergenic
TCATGATGACTATAAATACC+AGG 0.583831 5:-58778071 MsG0580027345.01.T01:CDS
CTAAAACAAGATAACTAGAA+GGG 0.585095 5:+58777796 None:intergenic
AACTGTGTTCTTCCTAACAT+AGG 0.600168 5:-58777836 MsG0580027345.01.T01:three_prime_UTR
TGAAAAGGGTAGGATCTCCC+TGG 0.608342 5:+58778053 None:intergenic
TATTTGCACCATGTAACTTG+AGG 0.611537 5:-58778495 MsG0580027345.01.T01:CDS
CGTGCCGTCTTTAACCAACA+TGG 0.612820 5:-58778020 MsG0580027345.01.T01:CDS
ACAAAGTTCCTGCAAATCTG+AGG 0.617490 5:-58778383 MsG0580027345.01.T01:CDS
AGGCAGCCTGATACTTACTC+GGG 0.619512 5:-58778316 MsG0580027345.01.T01:CDS
ATAACCATGTTGGTTAAAGA+CGG 0.629339 5:+58778016 None:intergenic
ATGCATGGGCTTGCAAACAA+TGG 0.630453 5:+58777634 None:intergenic
GCAAGAACAATATTCTCCCA+TGG 0.632221 5:-58777354 MsG0580027345.01.T02:three_prime_UTR
GGTTAAAGACGGCACGACTG+AGG 0.637232 5:+58778027 None:intergenic
ACTGAGGAACTGAAAAGGGT+AGG 0.640887 5:+58778043 None:intergenic
TCATCTACACATAACCATGT+TGG 0.651118 5:+58778006 None:intergenic
CATGATGACTATAAATACCA+GGG 0.653722 5:-58778070 MsG0580027345.01.T01:CDS
AAACTAGGACGATTCCACCA+TGG 0.656220 5:+58777337 None:intergenic
AAAGACATTTCAAGAAAACA+AGG 0.661133 5:+58777566 None:intergenic
CTGTGTTTCTGCTAAGTGGG+AGG 0.673072 5:+58777923 None:intergenic
GGATAAACTTAGAAAGACTG+AGG 0.673810 5:-58778281 MsG0580027345.01.T01:CDS
GGAAGTTCCAGATCTTGTGA+AGG 0.675883 5:-58778260 MsG0580027345.01.T01:CDS
AGATTGGACTGGGAATGGAT+GGG 0.686741 5:-58778464 MsG0580027345.01.T01:CDS
AGAACAATATTCTCCCATGG+TGG 0.703024 5:-58777351 MsG0580027345.01.T02:three_prime_UTR
TCCAGGAAGAGGAATCGAAG+TGG 0.703286 5:-58778205 MsG0580027345.01.T01:CDS
AATACAATATAACAAAACTG+GGG 0.717215 5:+58777497 None:intergenic
AACGTGTGATAAGATAACAA+AGG 0.729406 5:+58777531 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGATACAAAATTAATTT+AGG + Chr5:58778475-58778494 None:intergenic 10.0%
!! TTTGATACAAAATTAATTTA+GGG + Chr5:58778474-58778493 None:intergenic 10.0%
!!! TATATTTTTCATTAGTATTT+TGG - Chr5:58780024-58780043 MsG0580027345.01.T01:intron 10.0%
!!! TTGAATTATTTTGATTTTTT+AGG - Chr5:58778506-58778525 MsG0580027345.01.T01:CDS 10.0%
!!! TTTTTTTAAGAATCAAAATT+AGG + Chr5:58777663-58777682 None:intergenic 10.0%
!! AAAATCAAAATAATTCAATG+AGG + Chr5:58778504-58778523 None:intergenic 15.0%
!! ACGATTAATTAAGAAAATTA+AGG + Chr5:58777835-58777854 None:intergenic 15.0%
!! CAAATTTATAAAAACAAACT+AGG + Chr5:58781618-58781637 None:intergenic 15.0%
!! TGTTAAGATTAATTAAGAAA+GGG + Chr5:58777786-58777805 None:intergenic 15.0%
!! TTGTTAAGATTAATTAAGAA+AGG + Chr5:58777787-58777806 None:intergenic 15.0%
!!! AATTATTGTTTTCATTGATT+AGG - Chr5:58778161-58778180 MsG0580027345.01.T01:CDS 15.0%
!!! TATTAATTTTTTTGAAGGAA+TGG - Chr5:58780080-58780099 MsG0580027345.01.T01:intron 15.0%
!! AATACAATATAACAAAACTG+GGG + Chr5:58781443-58781462 None:intergenic 20.0%
!! AGAAAGAAAAAAAACTAACA+TGG + Chr5:58780959-58780978 None:intergenic 20.0%
!! GAATACAATATAACAAAACT+GGG + Chr5:58781444-58781463 None:intergenic 20.0%
!! GGTAAAACTTATATTATCAT+TGG + Chr5:58781342-58781361 None:intergenic 20.0%
!! TGAATACAATATAACAAAAC+TGG + Chr5:58781445-58781464 None:intergenic 20.0%
!!! AGTTTTTTTTCTTTCTAGAA+TGG - Chr5:58780963-58780982 MsG0580027345.01.T01:intron 20.0%
!!! ATGTGTAAAATATTTTACAC+TGG + Chr5:58778708-58778727 None:intergenic 20.0%
!!! CAAAAGATTGTTTTTATTGT+TGG + Chr5:58778878-58778897 None:intergenic 20.0%
!!! GATTTTTTGTTTTTGTTTTC+TGG - Chr5:58778262-58778281 MsG0580027345.01.T01:CDS 20.0%
!!! TATTTTATACATTAGTCTTC+CGG - Chr5:58781467-58781486 MsG0580027345.01.T01:CDS 20.0%
! AAAGACATTTCAAGAAAACA+AGG + Chr5:58781374-58781393 None:intergenic 25.0%
! AAATATCATGTTTATTTCCC+AGG - Chr5:58780286-58780305 MsG0580027345.01.T01:intron 25.0%
! AAGATGCCTAATATATTACA+AGG + Chr5:58780377-58780396 None:intergenic 25.0%
! AATTCAATTATCGTTCGTTA+TGG - Chr5:58777323-58777342 MsG0580027345.01.T02:three_prime_UTR 25.0%
! ACTAAAACAAGATAACTAGA+AGG + Chr5:58781145-58781164 None:intergenic 25.0%
! AGCATCATAATTGGTAAAAA+AGG + Chr5:58778682-58778701 None:intergenic 25.0%
! CATCATAATTGGTAAAAAAG+GGG + Chr5:58778680-58778699 None:intergenic 25.0%
! CTAAAACAAGATAACTAGAA+GGG + Chr5:58781144-58781163 None:intergenic 25.0%
! GATTATAACTGTTAGATCTT+AGG + Chr5:58778853-58778872 None:intergenic 25.0%
! GCATCATAATTGGTAAAAAA+GGG + Chr5:58778681-58778700 None:intergenic 25.0%
! TCATCTTAATTCGTTAATTC+TGG - Chr5:58777900-58777919 MsG0580027345.01.T01:three_prime_UTR 25.0%
! TTTGATATAACTCAAATGGA+GGG - Chr5:58779507-58779526 MsG0580027345.01.T01:CDS 25.0%
!! ATGTTTTATCATTGCAGTTA+AGG - Chr5:58780700-58780719 MsG0580027345.01.T01:intron 25.0%
!! GTTATTTCGAATCTTAATTC+TGG - Chr5:58777727-58777746 MsG0580027345.01.T01:three_prime_UTR 25.0%
!! TTTTGATATAACTCAAATGG+AGG - Chr5:58779506-58779525 MsG0580027345.01.T01:CDS 25.0%
!!! ATCTCTGTTTTTTGTTTCTT+TGG - Chr5:58779071-58779090 MsG0580027345.01.T01:CDS 25.0%
!!! ATTTTCTGAAGAAGAAAAGT+GGG - Chr5:58777469-58777488 MsG0580027345.01.T01:three_prime_UTR 25.0%
!!! GGATTTTGATATAACTCAAA+TGG - Chr5:58779503-58779522 MsG0580027345.01.T01:CDS 25.0%
!!! TATCTTGTTTTAGTATTCTG+TGG - Chr5:58781151-58781170 MsG0580027345.01.T01:intron 25.0%
!!! TATTTTCTGAAGAAGAAAAG+TGG - Chr5:58777468-58777487 MsG0580027345.01.T01:three_prime_UTR 25.0%
AAATCAACTGTAGCATCTAT+GGG - Chr5:58780582-58780601 MsG0580027345.01.T01:CDS 30.0%
AACCATAACTGTTAGATCTT+AGG + Chr5:58778798-58778817 None:intergenic 30.0%
AACGTGTGATAAGATAACAA+AGG + Chr5:58781409-58781428 None:intergenic 30.0%
ACAGAGCATACACAAAATTA+TGG + Chr5:58780339-58780358 None:intergenic 30.0%
ATGAAAAAAGATACGTTACG+TGG - Chr5:58777400-58777419 MsG0580027345.01.T01:three_prime_UTR 30.0%
ATGTGAATTCTTTCGAACAA+GGG + Chr5:58778554-58778573 None:intergenic 30.0%
CAACTATAACAGATTGTGAT+TGG + Chr5:58778736-58778755 None:intergenic 30.0%
CACAATCTGTTATAGTTGTT+TGG - Chr5:58778738-58778757 MsG0580027345.01.T01:CDS 30.0%
CAGTGATATTAATAAGCGAA+GGG + Chr5:58778221-58778240 None:intergenic 30.0%
CATGATGACTATAAATACCA+GGG - Chr5:58780867-58780886 MsG0580027345.01.T01:intron 30.0%
CGCGATTTAAGTCTAAAAAA+AGG + Chr5:58777579-58777598 None:intergenic 30.0%
GAAGAATCTGAAAATTTCAG+AGG + Chr5:58778337-58778356 None:intergenic 30.0%
GTACAGAATATAAGAACAGA+AGG + Chr5:58780317-58780336 None:intergenic 30.0%
GTCAGATTACAATACATTTG+AGG + Chr5:58779110-58779129 None:intergenic 30.0%
TAGACAAAACCAAATGCAAA+AGG + Chr5:58777973-58777992 None:intergenic 30.0%
TCAGTGATATTAATAAGCGA+AGG + Chr5:58778222-58778241 None:intergenic 30.0%
TCATGATGACTATAAATACC+AGG - Chr5:58780866-58780885 MsG0580027345.01.T01:intron 30.0%
TGAAAAAAGATACGTTACGT+GGG - Chr5:58777401-58777420 MsG0580027345.01.T01:three_prime_UTR 30.0%
TGAAAATTTCAGAGGTAAAC+AGG + Chr5:58778329-58778348 None:intergenic 30.0%
TGGTTAGATTCTATTGTTCA+AGG - Chr5:58777615-58777634 MsG0580027345.01.T01:three_prime_UTR 30.0%
TGTCGTCCTTGTAATATATT+AGG - Chr5:58780368-58780387 MsG0580027345.01.T01:intron 30.0%
TTCATTTGTCTCTTTGATTG+TGG + Chr5:58779820-58779839 None:intergenic 30.0%
TTCCTAAGATCTAACAGTTA+TGG - Chr5:58778793-58778812 MsG0580027345.01.T01:CDS 30.0%
TTTAGTGGAATAACCAACAT+TGG - Chr5:58781249-58781268 MsG0580027345.01.T01:intron 30.0%
! AATTTTCAGATTCTTCTTCC+AGG - Chr5:58778341-58778360 MsG0580027345.01.T01:CDS 30.0%
! ATAACCATGTTGGTTAAAGA+CGG + Chr5:58780924-58780943 None:intergenic 30.0%
! ATTTTCAGATTCTTCTTCCA+GGG - Chr5:58778342-58778361 MsG0580027345.01.T01:CDS 30.0%
! CTTGAAGTTAATGATTTGCA+GGG - Chr5:58780403-58780422 MsG0580027345.01.T01:intron 30.0%
! GCAACGATTCTTTTTATTGT+TGG + Chr5:58779029-58779048 None:intergenic 30.0%
! TCTTGAAGTTAATGATTTGC+AGG - Chr5:58780402-58780421 MsG0580027345.01.T01:intron 30.0%
! TTGAAGTTAATGATTTGCAG+GGG - Chr5:58780404-58780423 MsG0580027345.01.T01:intron 30.0%
! TTTTATCATTGCAGTTAAGG+TGG - Chr5:58780703-58780722 MsG0580027345.01.T01:intron 30.0%
!! AGAGATATCACTTTTATGCA+CGG + Chr5:58778907-58778926 None:intergenic 30.0%
!! TATGGCTTTGAAAGATAGAT+TGG - Chr5:58777341-58777360 MsG0580027345.01.T02:three_prime_UTR 30.0%
!! TTTTCTGAAGAAGAAAAGTG+GGG - Chr5:58777470-58777489 MsG0580027345.01.T01:three_prime_UTR 30.0%
!!! TAGAATGGTGTCTACTTTTT+AGG - Chr5:58780978-58780997 MsG0580027345.01.T01:intron 30.0%
!!! TGTCACTGATTATTGGTTTT+TGG - Chr5:58778023-58778042 MsG0580027345.01.T01:CDS 30.0%
!!! TTTTGTGTTTGTTTTAGCAG+AGG - Chr5:58779185-58779204 MsG0580027345.01.T01:CDS 30.0%
AAAACATCCTTCACAAGATC+TGG + Chr5:58780687-58780706 None:intergenic 35.0%
AAAAGACTAGCACCTATGTT+AGG + Chr5:58781116-58781135 None:intergenic 35.0%
AAACGTGGAATATCATTCGT+GGG - Chr5:58780184-58780203 MsG0580027345.01.T01:intron 35.0%
AACAGAGCAATGACATACAT+AGG - Chr5:58780772-58780791 MsG0580027345.01.T01:intron 35.0%
AACTGTGTTCTTCCTAACAT+AGG - Chr5:58781101-58781120 MsG0580027345.01.T01:intron 35.0%
AAGAAAACAAGGCACAAGAA+AGG + Chr5:58781363-58781382 None:intergenic 35.0%
AATATGGCTGTAGAGAAACA+TGG - Chr5:58778370-58778389 MsG0580027345.01.T01:CDS 35.0%
ACCTGATATTGGAACATTGA+AGG - Chr5:58778399-58778418 MsG0580027345.01.T01:CDS 35.0%
ACCTTCAATGTTCCAATATC+AGG + Chr5:58778403-58778422 None:intergenic 35.0%
ATACTCAGACGTTGAAGATA+AGG + Chr5:58779357-58779376 None:intergenic 35.0%
CAAATCAACTGTAGCATCTA+TGG - Chr5:58780581-58780600 MsG0580027345.01.T01:CDS 35.0%
CATGGTTATGAACCTGATAT+TGG - Chr5:58778388-58778407 MsG0580027345.01.T01:CDS 35.0%
CATGTGAATTCTTTCGAACA+AGG + Chr5:58778555-58778574 None:intergenic 35.0%
CGAAAGAATTCACATGGTTA+GGG - Chr5:58778559-58778578 MsG0580027345.01.T01:intron 35.0%
CTAGGGCTTCAAATAAAATG+AGG + Chr5:58781185-58781204 None:intergenic 35.0%
CTCTCTTTCACTAAAACTGT+GGG + Chr5:58779322-58779341 None:intergenic 35.0%
CTTGTTCGAAAGAATTCACA+TGG - Chr5:58778553-58778572 MsG0580027345.01.T01:intron 35.0%
GAATTGGATCTTGCTCTTAT+TGG - Chr5:58777492-58777511 MsG0580027345.01.T01:three_prime_UTR 35.0%
GGATAAACTTAGAAAGACTG+AGG - Chr5:58780656-58780675 MsG0580027345.01.T01:intron 35.0%
TAACTCAAATGGAGGGTTAT+TGG - Chr5:58779514-58779533 MsG0580027345.01.T01:CDS 35.0%
TAAGACCAAAGAAGAAGCAA+CGG - Chr5:58779652-58779671 MsG0580027345.01.T01:CDS 35.0%
TATTTGCACCATGTAACTTG+AGG - Chr5:58780442-58780461 MsG0580027345.01.T01:intron 35.0%
TCATCTACACATAACCATGT+TGG + Chr5:58780934-58780953 None:intergenic 35.0%
TCGAAAGAATTCACATGGTT+AGG - Chr5:58778558-58778577 MsG0580027345.01.T01:intron 35.0%
TCTCTTTCACTAAAACTGTG+GGG + Chr5:58779321-58779340 None:intergenic 35.0%
TTAATAAGCGAAGGGATTCA+AGG + Chr5:58778213-58778232 None:intergenic 35.0%
TTAGAGCTTCTGTTATCAAG+AGG - Chr5:58779913-58779932 MsG0580027345.01.T01:intron 35.0%
TTGGTAAAGAGAAGAGTTCT+AGG - Chr5:58777511-58777530 MsG0580027345.01.T01:three_prime_UTR 35.0%
TTTCACAGAATTGATGAGGT+TGG - Chr5:58779285-58779304 MsG0580027345.01.T01:CDS 35.0%
! AAATTCGTGTCGATGGATAA+AGG - Chr5:58777429-58777448 MsG0580027345.01.T01:intron 35.0%
! AATACTGTGTTTCTGCTAAG+TGG + Chr5:58781021-58781040 None:intergenic 35.0%
! ATACTGTGTTTCTGCTAAGT+GGG + Chr5:58781020-58781039 None:intergenic 35.0%
! CGTTAATTCTGGTCTTTCAT+TGG - Chr5:58777911-58777930 MsG0580027345.01.T01:three_prime_UTR 35.0%
! TAGTCTGTTCCTTTTGCATT+TGG - Chr5:58777961-58777980 MsG0580027345.01.T01:three_prime_UTR 35.0%
!! CAACATTGGCTTTGACTTTA+GGG - Chr5:58781263-58781282 MsG0580027345.01.T01:intron 35.0%
!! CTCATTTTATTTGAAGCCCT+AGG - Chr5:58781183-58781202 MsG0580027345.01.T01:intron 35.0%
!! CTGAGTATTGAATGCATAGA+TGG - Chr5:58779369-58779388 MsG0580027345.01.T01:CDS 35.0%
!! GCTTTCGCAAATTGATTTTC+AGG - Chr5:58779155-58779174 MsG0580027345.01.T01:CDS 35.0%
!! GGTTTTGTGTCACTGATTAT+TGG - Chr5:58778016-58778035 MsG0580027345.01.T01:CDS 35.0%
!! GTTTTAGTATTCTGTGGCAT+CGG - Chr5:58781157-58781176 MsG0580027345.01.T01:intron 35.0%
!! TGATGCTACTGATAGTTTTG+TGG - Chr5:58780821-58780840 MsG0580027345.01.T01:intron 35.0%
!!! TAACATAGGTGCTAGTCTTT+TGG - Chr5:58781115-58781134 MsG0580027345.01.T01:intron 35.0%
AACCAGTAGCAGTAACAAGT+TGG - Chr5:58779758-58779777 MsG0580027345.01.T01:CDS 40.0%
AACTTCTTGCTGCACACAAA+TGG + Chr5:58779465-58779484 None:intergenic 40.0%
AAGAACAGAAGGTCATACCT+GGG + Chr5:58780306-58780325 None:intergenic 40.0%
AATCAATTTGCGAAAGCAGC+AGG + Chr5:58779152-58779171 None:intergenic 40.0%
AATGGAGGGTTATTGGAAAC+AGG - Chr5:58779521-58779540 MsG0580027345.01.T01:CDS 40.0%
ACAAAGTTCCTGCAAATCTG+AGG - Chr5:58780554-58780573 MsG0580027345.01.T01:CDS 40.0%
AGAACAATATTCTCCCATGG+TGG - Chr5:58781586-58781605 MsG0580027345.01.T01:CDS 40.0%
AGTTCAGGGAAATCTGATGA+TGG - Chr5:58779591-58779610 MsG0580027345.01.T01:CDS 40.0%
ATATCATTCGTGGGTGATGT+TGG - Chr5:58780193-58780212 MsG0580027345.01.T01:intron 40.0%
ATTCCACGTTTCTCTGATAG+TGG + Chr5:58780175-58780194 None:intergenic 40.0%
ATTGCATCAAGTCAGCATTC+CGG + Chr5:58781489-58781508 None:intergenic 40.0%
CAAACTCTAGTGGTAGTTCA+GGG - Chr5:58779577-58779596 MsG0580027345.01.T01:CDS 40.0%
CCTAAAGTCAAAGCCAATGT+TGG + Chr5:58781265-58781284 None:intergenic 40.0%
CCTCTCTTTCACTAAAACTG+TGG + Chr5:58779323-58779342 None:intergenic 40.0%
CGCGTACACAAGTTGTTAAT+TGG - Chr5:58777595-58777614 MsG0580027345.01.T01:three_prime_UTR 40.0%
CTGGTTTCACAGAATTGATG+AGG - Chr5:58779281-58779300 MsG0580027345.01.T01:CDS 40.0%
GAAAAGAAGAAACCACTACC+AGG - Chr5:58778599-58778618 MsG0580027345.01.T01:intron 40.0%
GAAACGTGGAATATCATTCG+TGG - Chr5:58780183-58780202 MsG0580027345.01.T01:intron 40.0%
GAAGAAGAAAAGTGGGGAAT+TGG - Chr5:58777476-58777495 MsG0580027345.01.T01:three_prime_UTR 40.0%
GATGGATAAAGGTAGAAGAG+AGG - Chr5:58777440-58777459 MsG0580027345.01.T01:intron 40.0%
GCAAGAACAATATTCTCCCA+TGG - Chr5:58781583-58781602 MsG0580027345.01.T01:CDS 40.0%
GCAATACAAGTCACAACATC+AGG + Chr5:58780516-58780535 None:intergenic 40.0%
GCCAAAGTTACACAATGCAT+GGG + Chr5:58781320-58781339 None:intergenic 40.0%
GCTTCACAGTATTTAGCTGT+AGG - Chr5:58779840-58779859 MsG0580027345.01.T01:intron 40.0%
GGTAAAGATGCTGTTGAGTT+AGG - Chr5:58779690-58779709 MsG0580027345.01.T01:CDS 40.0%
GTCTTATCGCAGAAGAAGAA+TGG + Chr5:58779638-58779657 None:intergenic 40.0%
GTTTGGTAAGGATGATGTCA+AGG - Chr5:58779482-58779501 MsG0580027345.01.T01:CDS 40.0%
TAAGAACAGAAGGTCATACC+TGG + Chr5:58780307-58780326 None:intergenic 40.0%
TACAACCATCTTGTTGCCTT+TGG + Chr5:58779256-58779275 None:intergenic 40.0%
TACTTGGAAGACATGTACGA+GGG - Chr5:58779228-58779247 MsG0580027345.01.T01:CDS 40.0%
TCAAACTCTAGTGGTAGTTC+AGG - Chr5:58779576-58779595 MsG0580027345.01.T01:CDS 40.0%
TGACGAAACCATGAGAAAAG+AGG + Chr5:58781082-58781101 None:intergenic 40.0%
TGGGAGATGGAATACAATCT+AGG - Chr5:58780601-58780620 MsG0580027345.01.T01:intron 40.0%
TGTGGTTTCAGCTTCATTGA+AGG - Chr5:58780839-58780858 MsG0580027345.01.T01:intron 40.0%
TTATCGCAGAAGAAGAATGG+AGG + Chr5:58779635-58779654 None:intergenic 40.0%
TTGGTTACATTGTTGATGCC+TGG - Chr5:58780212-58780231 MsG0580027345.01.T01:intron 40.0%
TTTGTGTGCAGCAAGAAGTT+TGG - Chr5:58779465-58779484 MsG0580027345.01.T01:CDS 40.0%
! AGTAGCAGTAACAAGTTGGA+GGG - Chr5:58779762-58779781 MsG0580027345.01.T01:CDS 40.0%
! ATTCGATGCCTCTTTTCTCA+TGG - Chr5:58781071-58781090 MsG0580027345.01.T01:intron 40.0%
! CACTGGCAAAGCATCATAAT+TGG + Chr5:58778691-58778710 None:intergenic 40.0%
! CTGACTTGATGCAATCTCAA+AGG - Chr5:58781494-58781513 MsG0580027345.01.T01:CDS 40.0%
! CTTCTTTTCCTACATGTCCA+TGG + Chr5:58778588-58778607 None:intergenic 40.0%
! GATGATGCCTGCATAAGTTT+TGG - Chr5:58781213-58781232 MsG0580027345.01.T01:intron 40.0%
! GGCAGGACTGTTTAATTTAG+TGG - Chr5:58781234-58781253 MsG0580027345.01.T01:intron 40.0%
! TTACTCGGGTTCTTCTGAAA+AGG - Chr5:58780635-58780654 MsG0580027345.01.T01:intron 40.0%
!! ATGAGAAAAGAGGCATCGAA+TGG + Chr5:58781072-58781091 None:intergenic 40.0%
!! ATTGGCTTTGACTTTAGGGA+TGG - Chr5:58781267-58781286 MsG0580027345.01.T01:intron 40.0%
!! CCAACATTGGCTTTGACTTT+AGG - Chr5:58781262-58781281 MsG0580027345.01.T01:intron 40.0%
!! CCACAGTTTTAGTGAAAGAG+AGG - Chr5:58779320-58779339 MsG0580027345.01.T01:CDS 40.0%
!!! CTTGTTACTGCTACTGGTTT+TGG + Chr5:58779757-58779776 None:intergenic 40.0%
!!! GATTTTAGCTTCTAGACCTG+TGG - Chr5:58780102-58780121 MsG0580027345.01.T01:intron 40.0%
!!! GTGTCACGAGTTTTGGTTTT+TGG - Chr5:58778050-58778069 MsG0580027345.01.T01:CDS 40.0%
!!! TGGTTTTGTGTCACGAGTTT+TGG - Chr5:58778043-58778062 MsG0580027345.01.T01:CDS 40.0%
AAACTAGGACGATTCCACCA+TGG + Chr5:58781603-58781622 None:intergenic 45.0%
AACTAGGACGATTCCACCAT+GGG + Chr5:58781602-58781621 None:intergenic 45.0%
ACAAGATGGTTGTAGTTCGC+TGG - Chr5:58779262-58779281 MsG0580027345.01.T01:CDS 45.0%
ACAGTGGGATTAGAGGATGT+TGG - Chr5:58779889-58779908 MsG0580027345.01.T01:intron 45.0%
ACTAGAGTTTGACTCCACGT+GGG + Chr5:58779568-58779587 None:intergenic 45.0%
ACTGAGGAACTGAAAAGGGT+AGG + Chr5:58780897-58780916 None:intergenic 45.0%
ACTGTAGCATCTATGGGAGA+TGG - Chr5:58780588-58780607 MsG0580027345.01.T01:CDS 45.0%
AGCTGTAGGTTCCAATGTTG+AGG - Chr5:58779854-58779873 MsG0580027345.01.T01:intron 45.0%
AGTCCTGCCAAAACTTATGC+AGG + Chr5:58781223-58781242 None:intergenic 45.0%
AGTTAAGGTGGAAGTCATCC+AGG - Chr5:58780715-58780734 MsG0580027345.01.T01:intron 45.0%
CAACGGTGTACAAAGGTTGA+TGG - Chr5:58779669-58779688 MsG0580027345.01.T01:CDS 45.0%
CACGACTGAGGAACTGAAAA+GGG + Chr5:58780901-58780920 None:intergenic 45.0%
CGAGAATGCCTCAAGTTACA+TGG + Chr5:58780453-58780472 None:intergenic 45.0%
CTACTTGGAAGACATGTACG+AGG - Chr5:58779227-58779246 MsG0580027345.01.T01:CDS 45.0%
CTCGTACATGTCTTCCAAGT+AGG + Chr5:58779229-58779248 None:intergenic 45.0%
CTCTTTGATTGTGGCCAACT+TGG + Chr5:58779811-58779830 None:intergenic 45.0%
GAAACCACTACCAGGCATTT+CGG - Chr5:58778607-58778626 MsG0580027345.01.T01:intron 45.0%
GAAGAACCCGAGTAAGTATC+AGG + Chr5:58780630-58780649 None:intergenic 45.0%
GAAGAAGCAACGGTGTACAA+AGG - Chr5:58779662-58779681 MsG0580027345.01.T01:CDS 45.0%
GAATGGATGGGTAAAGGTGA+GGG - Chr5:58780485-58780504 MsG0580027345.01.T01:intron 45.0%
GAGGCACAAAGACAAAGTGA+AGG - Chr5:58779932-58779951 MsG0580027345.01.T01:intron 45.0%
GCATCAGACTGCAGAAACTT+CGG + Chr5:58780807-58780826 None:intergenic 45.0%
GCCCATGCATTGTGTAACTT+TGG - Chr5:58781316-58781335 MsG0580027345.01.T01:intron 45.0%
GGAAGAGAAATTCGTGTCGA+TGG - Chr5:58777422-58777441 MsG0580027345.01.T01:intron 45.0%
GGAAGTTCCAGATCTTGTGA+AGG - Chr5:58780677-58780696 MsG0580027345.01.T01:intron 45.0%
GGCCAAAGTTACACAATGCA+TGG + Chr5:58781321-58781340 None:intergenic 45.0%
GGTGCAATATCACGACATTC+AGG - Chr5:58779953-58779972 MsG0580027345.01.T01:intron 45.0%
GTACACCGTTGCTTCTTCTT+TGG + Chr5:58779660-58779679 None:intergenic 45.0%
GTGCAGCAAGAAGTTTGGTA+AGG - Chr5:58779470-58779489 MsG0580027345.01.T01:CDS 45.0%
GTTACATTGTTGATGCCTGG+TGG - Chr5:58780215-58780234 MsG0580027345.01.T01:intron 45.0%
TAATCCCACTGTCTTGAGAG+AGG + Chr5:58779881-58779900 None:intergenic 45.0%
TACCAGGCATTTCGGAAGAA+CGG - Chr5:58778615-58778634 MsG0580027345.01.T01:intron 45.0%
TAGGCAGCCTGATACTTACT+CGG - Chr5:58780620-58780639 MsG0580027345.01.T01:intron 45.0%
TAGGGTTACCATGGACATGT+AGG - Chr5:58778577-58778596 MsG0580027345.01.T01:intron 45.0%
TCACATGGTTAGGGTTACCA+TGG - Chr5:58778568-58778587 MsG0580027345.01.T01:intron 45.0%
TCTCAAGACAGTGGGATTAG+AGG - Chr5:58779882-58779901 MsG0580027345.01.T01:intron 45.0%
TCTTGGTCCTCTCATCTACT+CGG + Chr5:58780147-58780166 None:intergenic 45.0%
TTCTTCCAGGGATGCGAATA+TGG - Chr5:58778354-58778373 MsG0580027345.01.T01:CDS 45.0%
TTGAGAGAGGACCTCAACAT+TGG + Chr5:58779868-58779887 None:intergenic 45.0%
TTGCTGCACACAAATGGTTC+TGG + Chr5:58779459-58779478 None:intergenic 45.0%
TTTGATTGTGGCCAACTTGG+TGG + Chr5:58779808-58779827 None:intergenic 45.0%
! ACTTGAGGCATTCTCGAGAT+TGG - Chr5:58780457-58780476 MsG0580027345.01.T01:intron 45.0%
! AGATTGGACTGGGAATGGAT+GGG - Chr5:58780473-58780492 MsG0580027345.01.T01:intron 45.0%
! ATTTGAAGCCCTAGGAAGCA+AGG - Chr5:58781191-58781210 MsG0580027345.01.T01:intron 45.0%
! CAGTAGCAGTAACAAGTTGG+AGG - Chr5:58779761-58779780 MsG0580027345.01.T01:CDS 45.0%
! GGTGGTTCCAACCAGTTTTA+CGG + Chr5:58779790-58779809 None:intergenic 45.0%
! TGGAGGTTTTCTTCCAGTTC+TGG + Chr5:58779618-58779637 None:intergenic 45.0%
! TTTGCTGTCCTCAGATTTGC+AGG + Chr5:58780565-58780584 None:intergenic 45.0%
!! ATCTGATGATGGACCAGAAC+TGG - Chr5:58779602-58779621 MsG0580027345.01.T01:CDS 45.0%
!! ATGCCTGCATAAGTTTTGGC+AGG - Chr5:58781217-58781236 MsG0580027345.01.T01:intron 45.0%
!! CACGTTTCTCTGATAGTGGT+CGG + Chr5:58780171-58780190 None:intergenic 45.0%
!! CTCCAACTTGTTACTGCTAC+TGG + Chr5:58779763-58779782 None:intergenic 45.0%
!!! TTTTTTATTAATTTTTTTGA+AGG - Chr5:58780075-58780094 MsG0580027345.01.T01:intron 5.0%
ACTCGGAGACCTAGATCATC+AGG + Chr5:58780130-58780149 None:intergenic 50.0%
ACTGGTTGGAACCACCAAGT+TGG - Chr5:58779794-58779813 MsG0580027345.01.T01:intron 50.0%
AGCAGAGGAGAACAAACGTC+TGG - Chr5:58779200-58779219 MsG0580027345.01.T01:CDS 50.0%
AGGCAGCCTGATACTTACTC+GGG - Chr5:58780621-58780640 MsG0580027345.01.T01:intron 50.0%
AGGCATCATCCTTGCTTCCT+AGG + Chr5:58781203-58781222 None:intergenic 50.0%
AGGCATTCTCGAGATTGGAC+TGG - Chr5:58780462-58780481 MsG0580027345.01.T01:intron 50.0%
AGGTCCTCTCTCAAGACAGT+GGG - Chr5:58779874-58779893 MsG0580027345.01.T01:intron 50.0%
CAAACGTCTGGTTGCCTACT+TGG - Chr5:58779212-58779231 MsG0580027345.01.T01:CDS 50.0%
CACGTGGAGTCAAACTCTAG+TGG - Chr5:58779567-58779586 MsG0580027345.01.T01:CDS 50.0%
CACTAGAGTTTGACTCCACG+TGG + Chr5:58779569-58779588 None:intergenic 50.0%
CCTAGATCATCAGGTACCAC+AGG + Chr5:58780121-58780140 None:intergenic 50.0%
CCTGTGGTACCTGATGATCT+AGG - Chr5:58780118-58780137 MsG0580027345.01.T01:intron 50.0%
CGACCACTATCAGAGAAACG+TGG - Chr5:58780169-58780188 MsG0580027345.01.T01:intron 50.0%
CGTGCCGTCTTTAACCAACA+TGG - Chr5:58780917-58780936 MsG0580027345.01.T01:intron 50.0%
CTAGAGTTTGACTCCACGTG+GGG + Chr5:58779567-58779586 None:intergenic 50.0%
GAAGCAAATGTATCCCCACG+TGG - Chr5:58779551-58779570 MsG0580027345.01.T01:CDS 50.0%
GACATGTACGAGGGTTCCAA+AGG - Chr5:58779237-58779256 MsG0580027345.01.T01:CDS 50.0%
GACTGGGAATGGATGGGTAA+AGG - Chr5:58780479-58780498 MsG0580027345.01.T01:intron 50.0%
GAGGGTTCCGTAAAACTGGT+TGG - Chr5:58779780-58779799 MsG0580027345.01.T01:intron 50.0%
GATGGGTAAAGGTGAGGGAA+AGG - Chr5:58780490-58780509 MsG0580027345.01.T01:intron 50.0%
GCACGACTGAGGAACTGAAA+AGG + Chr5:58780902-58780921 None:intergenic 50.0%
GGAATGGATGGGTAAAGGTG+AGG - Chr5:58780484-58780503 MsG0580027345.01.T01:intron 50.0%
GGATGAAGCTAAGAAGCTCG+AGG - Chr5:58779983-58780002 MsG0580027345.01.T01:intron 50.0%
GGCATCATCCTTGCTTCCTA+GGG + Chr5:58781202-58781221 None:intergenic 50.0%
GGCATTCTCGAGATTGGACT+GGG - Chr5:58780463-58780482 MsG0580027345.01.T01:intron 50.0%
GGGTTCCAAAGGCAACAAGA+TGG - Chr5:58779248-58779267 MsG0580027345.01.T01:CDS 50.0%
GTTGGAGGGTTCCGTAAAAC+TGG - Chr5:58779776-58779795 MsG0580027345.01.T01:intron 50.0%
TACAGCCATATTCGCATCCC+TGG + Chr5:58778362-58778381 None:intergenic 50.0%
TAGGTCTCCGAGTAGATGAG+AGG - Chr5:58780137-58780156 MsG0580027345.01.T01:intron 50.0%
TCACGACATTCAGGATGCAG+AGG - Chr5:58779962-58779981 MsG0580027345.01.T01:intron 50.0%
TCCAGGAAGAGGAATCGAAG+TGG - Chr5:58780732-58780751 MsG0580027345.01.T01:intron 50.0%
TCTTCCGAAATGCCTGGTAG+TGG + Chr5:58778614-58778633 None:intergenic 50.0%
TGAAAAGGGTAGGATCTCCC+TGG + Chr5:58780887-58780906 None:intergenic 50.0%
TGTCTAGATCTCTCGCGTGT+GGG - Chr5:58777987-58778006 MsG0580027345.01.T01:exon 50.0%
TTGTCTAGATCTCTCGCGTG+TGG - Chr5:58777986-58778005 MsG0580027345.01.T01:three_prime_UTR 50.0%
! CTGTGTTTCTGCTAAGTGGG+AGG + Chr5:58781017-58781036 None:intergenic 50.0%
! GAGATTGGACTGGGAATGGA+TGG - Chr5:58780472-58780491 MsG0580027345.01.T01:intron 50.0%
! TCTCGAGATTGGACTGGGAA+TGG - Chr5:58780468-58780487 MsG0580027345.01.T01:intron 50.0%
! TCTCTCGCGTGTGGGATTTT+TGG - Chr5:58777995-58778014 MsG0580027345.01.T01:exon 50.0%
!! CTCTGATAGTGGTCGGATCT+TGG + Chr5:58780164-58780183 None:intergenic 50.0%
!! TCGAGCTTTGTTCCGGTACT+TGG + Chr5:58779427-58779446 None:intergenic 50.0%
AGCCGTTCTTCCGAAATGCC+TGG + Chr5:58778620-58778639 None:intergenic 55.0%
CACAGCACTACGCCAAGTAC+CGG - Chr5:58779412-58779431 MsG0580027345.01.T01:CDS 55.0%
GAGGTCCTCTCTCAAGACAG+TGG - Chr5:58779873-58779892 MsG0580027345.01.T01:intron 55.0%
GCCACTTCGATTCCTCTTCC+TGG + Chr5:58780736-58780755 None:intergenic 55.0%
GGTGGAAGTCATCCAGGAAG+AGG - Chr5:58780721-58780740 MsG0580027345.01.T01:intron 55.0%
GGTTAAAGACGGCACGACTG+AGG + Chr5:58780913-58780932 None:intergenic 55.0%
GTTGATGCCTGGTGGCATGA+TGG - Chr5:58780223-58780242 MsG0580027345.01.T01:intron 55.0%
! ATGCCTGGTGGCATGATGGA+TGG - Chr5:58780227-58780246 MsG0580027345.01.T01:intron 55.0%
! GTAGTGCTGTGGACTGAGGA+CGG + Chr5:58779403-58779422 None:intergenic 55.0%
!! CTGGTGGCATGATGGATGGT+GGG - Chr5:58780231-58780250 MsG0580027345.01.T01:intron 55.0%
!! GAGCGTGTCGAGCTTTGTTC+CGG + Chr5:58779434-58779453 None:intergenic 55.0%
!! TGGCATGATGGATGGTGGGA+AGG - Chr5:58780235-58780254 MsG0580027345.01.T01:intron 55.0%
CCACCATCCATCATGCCACC+AGG + Chr5:58780233-58780252 None:intergenic 60.0%
CGGTACTTGGCGTAGTGCTG+TGG + Chr5:58779414-58779433 None:intergenic 60.0%
! TGGCGTAGTGCTGTGGACTG+AGG + Chr5:58779407-58779426 None:intergenic 60.0%
!! CCTGGTGGCATGATGGATGG+TGG - Chr5:58780230-58780249 MsG0580027345.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 58777316 58781643 58777316 ID=MsG0580027345.01;Name=MsG0580027345.01
Chr5 mRNA 58777377 58781643 58777377 ID=MsG0580027345.01.T01;Parent=MsG0580027345.01;Name=MsG0580027345.01.T01;_AED=0.46;_eAED=0.46;_QI=26|0.8|1|1|0.8|0.66|6|609|644
Chr5 exon 58777377 58777423 58777377 ID=MsG0580027345.01.T01:exon:21991;Parent=MsG0580027345.01.T01
Chr5 exon 58777444 58778535 58777444 ID=MsG0580027345.01.T01:exon:21990;Parent=MsG0580027345.01.T01
Chr5 five_prime_UTR 58781618 58781643 58781618 ID=MsG0580027345.01.T01:five_prime_utr;Parent=MsG0580027345.01.T01
Chr5 CDS 58781323 58781617 58781323 ID=MsG0580027345.01.T01:cds;Parent=MsG0580027345.01.T01
Chr5 CDS 58780539 58780609 58780539 ID=MsG0580027345.01.T01:cds;Parent=MsG0580027345.01.T01
Chr5 CDS 58778955 58779782 58778955 ID=MsG0580027345.01.T01:cds;Parent=MsG0580027345.01.T01
Chr5 CDS 58778652 58778862 58778652 ID=MsG0580027345.01.T01:cds;Parent=MsG0580027345.01.T01
Chr5 CDS 58778006 58778535 58778006 ID=MsG0580027345.01.T01:cds;Parent=MsG0580027345.01.T01
Chr5 three_prime_UTR 58777444 58778005 58777444 ID=MsG0580027345.01.T01:three_prime_utr;Parent=MsG0580027345.01.T01
Chr5 three_prime_UTR 58777377 58777423 58777377 ID=MsG0580027345.01.T01:three_prime_utr;Parent=MsG0580027345.01.T01
Chr5 mRNA 58777316 58781643 58777316 ID=MsG0580027345.01.T02;Parent=MsG0580027345.01;Name=MsG0580027345.01.T02;_AED=0.46;_eAED=0.46;_QI=26|0.75|1|1|1|1|5|690|644
Chr5 exon 58777316 58778535 58777316 ID=MsG0580027345.01.T02:exon:21992;Parent=MsG0580027345.01.T02
Chr5 five_prime_UTR 58781618 58781643 58781618 ID=MsG0580027345.01.T02:five_prime_utr;Parent=MsG0580027345.01.T02
Chr5 CDS 58781323 58781617 58781323 ID=MsG0580027345.01.T02:cds;Parent=MsG0580027345.01.T02
Chr5 CDS 58780539 58780609 58780539 ID=MsG0580027345.01.T02:cds;Parent=MsG0580027345.01.T02
Chr5 CDS 58778955 58779782 58778955 ID=MsG0580027345.01.T02:cds;Parent=MsG0580027345.01.T02
Chr5 CDS 58778652 58778862 58778652 ID=MsG0580027345.01.T02:cds;Parent=MsG0580027345.01.T02
Chr5 CDS 58778006 58778535 58778006 ID=MsG0580027345.01.T02:cds;Parent=MsG0580027345.01.T02
Chr5 three_prime_UTR 58777316 58778005 58777316 ID=MsG0580027345.01.T02:three_prime_utr;Parent=MsG0580027345.01.T02
Gene Sequence

>MsG0580027345.01.T01

ATGGCTTTGAAAGATAGATTGGCTTCATCTTCTGAAACGACGTCGTCACAAGATGAAAATGAAAAAAGATACGTTACGTGGGAAGAGAAATTCGTGTCGATGGATAAAGGTAGAAGAGAGGTTCGTTATTTTCTGAAGAAGAAAAGTGGGGAATTGGATCTTGCTCTTATTGGTAAAGAGAAGAGTTCTAGGCATATGAGTTATCATTATGCGATTCGAAACTCTTCTTTTGCTCCTTTTTTTAGACTTAAATCGCGTACACAAGTTGTTAATTGGTTAGATTCTATTGTTCAAGATTCTTCTTCCAGGGATGCGAATATGGCTGTAGAGAAACATGGTTATGAACCTGATATTGGAACATTGAAGGTGTATGATTTTGTGTTTGTTTTAGCAGAGGAGAACAAACGTCTGGTTGCCTACTTGGAAGACATGTACGAGGGTTCCAAAGGCAACAAGATGGTTGTAGTTCGCTGGTTTCACAGAATTGATGAGGTTGGTTTTGTTTTGCCCCACAGTTTTAGTGAAAGAGAGGTTTACTTTTCTCCTTATCTTCAACGTCTGAGTATTGAATGCATAGATGGTTTGACTTCCGTCCTCAGTCCACAGCACTACGCCAAGTACCGGAACAAAGCTCGACACGCTCGTCCAGAACCATTTGTGTGCAGCAAGAAGTTTGGTAAGGATGATGTCAAGGATTTTGATATAACTCAAATGGAGGGTTATTGGAAACAGGAAATACTGAAGCAAATGTATCCCCACGTGGAGTCAAACTCTAGTGGTAGTTCAGGGAAATCTGATGATGGACCAGAACTGGAAGAAAACCTCCATTCTTCTTCTGCGATAAGACCAAAGAAGAAGCAACGGTGTACAAAGGTTGATGGTAAAGATGCTGTTGAGTTAGGTTCTCTTCAATTAGAAAAATTGAGTAATTGTAAGATTGATGCCAAAACCAGTAGCAGTAACAAGTTGGAGGGTTCCGTAAAACTGGTTGGAACCACCAAGTTGGCCACAATCAAAGAGACAAATGAAGCTTCACAGTATTTAGCTGTAGGTTCCAATGTTGAGGTCCTCTCTCAAGACAGTGGGATTAGAGGATGTTGGTTTAGAGCTTCTGTTATCAAGAGGCACAAAGACAAAGTGAAGGTGCAATATCACGACATTCAGGATGCAGAGGATGAAGCTAAGAAGCTCGAGGAATGGATTTTAGCTTCTAGACCTGTGGTACCTGATGATCTAGGTCTCCGAGTAGATGAGAGGACCAAGATCCGACCACTATCAGAGAAACGTGGAATATCATTCGTGGGTGATGTTGGTTACATTGTTGATGCCTGGTGGCATGATGGATGGTGGGAAGGCATTGTTGTTCAAAAAGAATCTGATGACAAATATCATGTTTATTTCCCAGGGGAAAAGAAGATGTCAATATTTGCACCATGTAACTTGAGGCATTCTCGAGATTGGACTGGGAATGGATGGGTAAAGGTGAGGGAAAGGCCTGATGTTGTGACTTGTATTGCATCAAGCTTGAAAACAAAACAAAGTTCCTGCAAATCTGAGGACAGCAAATCAACTGTAGCATCTATGGGAGATGGAATACAATCTAGGCAGCCTGATACTTACTCGGGTTCTTCTGAAAAGGATAAACTTAGAAAGACTGAGGAAGTTCCAGATCTTGTGAAGGATGTTTTATCATTGCAGTTAAGGTGGAAGTCATCCAGGAAGAGGAATCGAAGTGGCACTTCTCAGCAGAAGCAACAGAGCAATGACATACATAGGAAATTGTCGCCGAAGTTTCTGCAGTCTGATGCTACTGATAGTTTTGTGGTTTCAGCTTCATTGAAGGTTGATCATGATGACTATAAATACCAGGGAGATCCTACCCTTTTCAGTTCCTCAGTCGTGCCGTCTTTAACCAACATGGTTATGTGTAGATGA

>MsG0580027345.01.T02

ATGGCTTTGAAAGATAGATTGGCTTCATCTTCTGAAACGACGTCGTCACAAGATGAAAATGAAAAAAGATACGTTACGTGGGAAGAGAAATTCGTGTCGATGGATAAAGGTAGAAGAGAGGTTCGTTATTTTCTGAAGAAGAAAAGTGGGGAATTGGATCTTGCTCTTATTGGTAAAGAGAAGAGTTCTAGGCATATGAGTTATCATTATGCGATTCGAAACTCTTCTTTTGCTCCTTTTTTTAGACTTAAATCGCGTACACAAGTTGTTAATTGGTTAGATTCTATTGTTCAAGATTCTTCTTCCAGGGATGCGAATATGGCTGTAGAGAAACATGGTTATGAACCTGATATTGGAACATTGAAGGTGTATGATTTTGTGTTTGTTTTAGCAGAGGAGAACAAACGTCTGGTTGCCTACTTGGAAGACATGTACGAGGGTTCCAAAGGCAACAAGATGGTTGTAGTTCGCTGGTTTCACAGAATTGATGAGGTTGGTTTTGTTTTGCCCCACAGTTTTAGTGAAAGAGAGGTTTACTTTTCTCCTTATCTTCAACGTCTGAGTATTGAATGCATAGATGGTTTGACTTCCGTCCTCAGTCCACAGCACTACGCCAAGTACCGGAACAAAGCTCGACACGCTCGTCCAGAACCATTTGTGTGCAGCAAGAAGTTTGGTAAGGATGATGTCAAGGATTTTGATATAACTCAAATGGAGGGTTATTGGAAACAGGAAATACTGAAGCAAATGTATCCCCACGTGGAGTCAAACTCTAGTGGTAGTTCAGGGAAATCTGATGATGGACCAGAACTGGAAGAAAACCTCCATTCTTCTTCTGCGATAAGACCAAAGAAGAAGCAACGGTGTACAAAGGTTGATGGTAAAGATGCTGTTGAGTTAGGTTCTCTTCAATTAGAAAAATTGAGTAATTGTAAGATTGATGCCAAAACCAGTAGCAGTAACAAGTTGGAGGGTTCCGTAAAACTGGTTGGAACCACCAAGTTGGCCACAATCAAAGAGACAAATGAAGCTTCACAGTATTTAGCTGTAGGTTCCAATGTTGAGGTCCTCTCTCAAGACAGTGGGATTAGAGGATGTTGGTTTAGAGCTTCTGTTATCAAGAGGCACAAAGACAAAGTGAAGGTGCAATATCACGACATTCAGGATGCAGAGGATGAAGCTAAGAAGCTCGAGGAATGGATTTTAGCTTCTAGACCTGTGGTACCTGATGATCTAGGTCTCCGAGTAGATGAGAGGACCAAGATCCGACCACTATCAGAGAAACGTGGAATATCATTCGTGGGTGATGTTGGTTACATTGTTGATGCCTGGTGGCATGATGGATGGTGGGAAGGCATTGTTGTTCAAAAAGAATCTGATGACAAATATCATGTTTATTTCCCAGGGGAAAAGAAGATGTCAATATTTGCACCATGTAACTTGAGGCATTCTCGAGATTGGACTGGGAATGGATGGGTAAAGGTGAGGGAAAGGCCTGATGTTGTGACTTGTATTGCATCAAGCTTGAAAACAAAACAAAGTTCCTGCAAATCTGAGGACAGCAAATCAACTGTAGCATCTATGGGAGATGGAATACAATCTAGGCAGCCTGATACTTACTCGGGTTCTTCTGAAAAGGATAAACTTAGAAAGACTGAGGAAGTTCCAGATCTTGTGAAGGATGTTTTATCATTGCAGTTAAGGTGGAAGTCATCCAGGAAGAGGAATCGAAGTGGCACTTCTCAGCAGAAGCAACAGAGCAATGACATACATAGGAAATTGTCGCCGAAGTTTCTGCAGTCTGATGCTACTGATAGTTTTGTGGTTTCAGCTTCATTGAAGGTTGATCATGATGACTATAAATACCAGGGAGATCCTACCCTTTTCAGTTCCTCAGTCGTGCCGTCTTTAACCAACATGGTTATGTGTAGATGA

Protein sequence

>MsG0580027345.01.T01

MALKDRLASSSETTSSQDENEKRYVTWEEKFVSMDKGRREVRYFLKKKSGELDLALIGKEKSSRHMSYHYAIRNSSFAPFFRLKSRTQVVNWLDSIVQDSSSRDANMAVEKHGYEPDIGTLKVYDFVFVLAEENKRLVAYLEDMYEGSKGNKMVVVRWFHRIDEVGFVLPHSFSEREVYFSPYLQRLSIECIDGLTSVLSPQHYAKYRNKARHARPEPFVCSKKFGKDDVKDFDITQMEGYWKQEILKQMYPHVESNSSGSSGKSDDGPELEENLHSSSAIRPKKKQRCTKVDGKDAVELGSLQLEKLSNCKIDAKTSSSNKLEGSVKLVGTTKLATIKETNEASQYLAVGSNVEVLSQDSGIRGCWFRASVIKRHKDKVKVQYHDIQDAEDEAKKLEEWILASRPVVPDDLGLRVDERTKIRPLSEKRGISFVGDVGYIVDAWWHDGWWEGIVVQKESDDKYHVYFPGEKKMSIFAPCNLRHSRDWTGNGWVKVRERPDVVTCIASSLKTKQSSCKSEDSKSTVASMGDGIQSRQPDTYSGSSEKDKLRKTEEVPDLVKDVLSLQLRWKSSRKRNRSGTSQQKQQSNDIHRKLSPKFLQSDATDSFVVSASLKVDHDDYKYQGDPTLFSSSVVPSLTNMVMCR*

>MsG0580027345.01.T02

MALKDRLASSSETTSSQDENEKRYVTWEEKFVSMDKGRREVRYFLKKKSGELDLALIGKEKSSRHMSYHYAIRNSSFAPFFRLKSRTQVVNWLDSIVQDSSSRDANMAVEKHGYEPDIGTLKVYDFVFVLAEENKRLVAYLEDMYEGSKGNKMVVVRWFHRIDEVGFVLPHSFSEREVYFSPYLQRLSIECIDGLTSVLSPQHYAKYRNKARHARPEPFVCSKKFGKDDVKDFDITQMEGYWKQEILKQMYPHVESNSSGSSGKSDDGPELEENLHSSSAIRPKKKQRCTKVDGKDAVELGSLQLEKLSNCKIDAKTSSSNKLEGSVKLVGTTKLATIKETNEASQYLAVGSNVEVLSQDSGIRGCWFRASVIKRHKDKVKVQYHDIQDAEDEAKKLEEWILASRPVVPDDLGLRVDERTKIRPLSEKRGISFVGDVGYIVDAWWHDGWWEGIVVQKESDDKYHVYFPGEKKMSIFAPCNLRHSRDWTGNGWVKVRERPDVVTCIASSLKTKQSSCKSEDSKSTVASMGDGIQSRQPDTYSGSSEKDKLRKTEEVPDLVKDVLSLQLRWKSSRKRNRSGTSQQKQQSNDIHRKLSPKFLQSDATDSFVVSASLKVDHDDYKYQGDPTLFSSSVVPSLTNMVMCR*