AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023600.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023600.01.T01 MTR_8g096740 63.636 352 6 3 80 344 64 380 4.56e-142 407
MsG0480023600.01.T01 MTR_8g096740 59.683 315 5 3 80 307 8 287 1.09e-113 332
MsG0480023600.01.T01 MTR_8g096750 87.143 70 7 2 1 69 22 90 5.77e-33 118
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023600.01.T01 AT4G24940 48.148 351 60 3 80 343 6 321 2.93e-104 309
MsG0480023600.01.T01 AT5G50680 48.266 346 59 3 79 339 5 315 4.71e-100 298
MsG0480023600.01.T01 AT5G50580 48.266 346 59 3 79 339 5 315 4.71e-100 298
MsG0480023600.01.T01 AT5G50680 47.989 348 59 3 79 339 5 317 7.35e-100 298
MsG0480023600.01.T01 AT5G50580 47.989 348 59 3 79 339 5 317 7.35e-100 298

Find 103 sgRNAs with CRISPR-Local

Find 551 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCAGTTTCTGCTGTTAT+TGG 0.120073 4:-87484107 MsG0480023600.01.T01:CDS
AAAGCTCATGTCTTAGTTTA+TGG 0.134275 4:-87489293 MsG0480023600.01.T01:CDS
ATTTAGAGCGTTGACGATTT+AGG 0.185755 4:-87483721 MsG0480023600.01.T01:three_prime_UTR
CTGGAAATCTTGGTTGTTAA+TGG 0.191017 4:-87483838 MsG0480023600.01.T01:three_prime_UTR
CTCCAGTTTCTGCTGTTATT+GGG 0.194555 4:-87484106 MsG0480023600.01.T01:CDS
GTTCTCCGAAATTATCTTAC+AGG 0.199627 4:-87488895 MsG0480023600.01.T01:intron
GAGGTTATCAAAGCAATTTC+TGG 0.209705 4:-87483987 MsG0480023600.01.T01:CDS
CAAGTGTATGTTTAGGAATT+AGG 0.233371 4:+87483298 None:intergenic
AAATATAACCAGCTTCTTTC+GGG 0.238266 4:+87483588 None:intergenic
CAATGTTCTTAAGCTGAAAA+AGG 0.245988 4:-87484291 MsG0480023600.01.T01:CDS
AAAGCTTATGTTTATGATCT+AGG 0.255464 4:-87483491 MsG0480023600.01.T01:three_prime_UTR
TGACCGTCAGATTAGGGTTT+GGG 0.273281 4:-87489524 MsG0480023600.01.T01:CDS
TTTAGAGCGTTGACGATTTA+GGG 0.278454 4:-87483720 MsG0480023600.01.T01:three_prime_UTR
CTACACGTTTGGAAGCTTTC+CGG 0.296580 4:+87488230 None:intergenic
TTCTGAGTCACTGGAAATCT+TGG 0.301471 4:-87483848 MsG0480023600.01.T01:three_prime_UTR
TAAATATAACCAGCTTCTTT+CGG 0.302781 4:+87483587 None:intergenic
AGCTGGTTATATTTATGTTC+TGG 0.304268 4:-87483579 MsG0480023600.01.T01:three_prime_UTR
TCATGTGCCTGATACTCTTC+TGG 0.307495 4:-87484159 MsG0480023600.01.T01:CDS
CTTTGTATGACCGTCAGATT+AGG 0.312758 4:-87489531 MsG0480023600.01.T01:CDS
AACTTCAAAGACAGGTTTAC+CGG 0.332460 4:+87483547 None:intergenic
GACATATCTGATTCAAATAC+TGG 0.335424 4:-87483900 MsG0480023600.01.T01:CDS
GCTGGTTATATTTATGTTCT+GGG 0.359205 4:-87483578 MsG0480023600.01.T01:three_prime_UTR
AGCTTGTTATGTCTATGTTC+TGG 0.364920 4:-87483404 MsG0480023600.01.T01:three_prime_UTR
GTGGGATTGTGGACCATTAT+AGG 0.366113 4:-87491591 MsG0480023600.01.T01:CDS
CCTGATGAGAATGTGTATAA+TGG 0.366364 4:-87488655 MsG0480023600.01.T01:CDS
AGACGAAGCGAATTGTTTCC+AGG 0.367743 4:-87491281 MsG0480023600.01.T01:CDS
AAGAACCTGTAAGATAATTT+CGG 0.381112 4:+87488890 None:intergenic
CTGATTCCATGTTCCTATAA+TGG 0.382717 4:+87491578 None:intergenic
AATCTTTCCAGAAGAGTATC+AGG 0.384196 4:+87484152 None:intergenic
GACCGGTCTATCGTCAATTA+AGG 0.388703 4:+87488714 None:intergenic
GTTCGTCCAAGTGTATGTTT+AGG 0.395507 4:+87483291 None:intergenic
AGTATAAAATGCTACACGTT+TGG 0.407403 4:+87488219 None:intergenic
TCAAAGCAATTTCTGGGAAA+GGG 0.415897 4:-87483980 MsG0480023600.01.T01:CDS
CCATTATACACATTCTCATC+AGG 0.427583 4:+87488655 None:intergenic
TGCAAGAATATTGTTCTGGC+TGG 0.429331 4:-87488751 MsG0480023600.01.T01:CDS
ATGACCGTCAGATTAGGGTT+TGG 0.429457 4:-87489525 MsG0480023600.01.T01:CDS
TCCAGTTTCTGCTGTTATTG+GGG 0.444754 4:-87484105 MsG0480023600.01.T01:CDS
CATTATAGGAACATGGAATC+AGG 0.445832 4:-87491577 MsG0480023600.01.T01:CDS
TTTGTATGACCGTCAGATTA+GGG 0.453191 4:-87489530 MsG0480023600.01.T01:CDS
ACTTAAAGACTTCAATCCTA+TGG 0.454595 4:-87488602 MsG0480023600.01.T01:intron
AGGTTATCAAAGCAATTTCT+GGG 0.456843 4:-87483986 MsG0480023600.01.T01:CDS
TTCAAAAGACAGCTTGCCCT+TGG 0.458407 4:+87483637 None:intergenic
TGATACTCTTCTGGAAAGAT+TGG 0.460712 4:-87484150 MsG0480023600.01.T01:CDS
TATGTTCTGGGTTCTCCAGC+CGG 0.477087 4:-87483566 MsG0480023600.01.T01:three_prime_UTR
GAAGTTACAAATCCTCATGA+TGG 0.484490 4:-87483617 MsG0480023600.01.T01:three_prime_UTR
ACGGCGACGGCGAAGAGTTA+CGG 0.491061 4:-87489566 MsG0480023600.01.T01:CDS
GTCTTAGTTTATGGAATGAA+AGG 0.496608 4:-87489284 MsG0480023600.01.T01:CDS
ATCAAAGCAATTTCTGGGAA+AGG 0.498227 4:-87483981 MsG0480023600.01.T01:CDS
AACTCAAACTCGTGGGATTG+TGG 0.499866 4:-87491602 MsG0480023600.01.T01:CDS
CTAATTCCTAAACATACACT+TGG 0.500327 4:-87483297 MsG0480023600.01.T01:three_prime_UTR
GATTCTCCAGCGGGTAAACC+TGG 0.505734 4:-87483382 MsG0480023600.01.T01:three_prime_UTR
AGCTTTCTAACTTCAAAGAC+AGG 0.512466 4:+87483539 None:intergenic
GAGGCTGAAGGACGTAGTGC+GGG 0.514026 4:-87484338 MsG0480023600.01.T01:CDS
AATATTGTTCTGGCTGGAGT+TGG 0.520269 4:-87488745 MsG0480023600.01.T01:CDS
CAAAGCAATTTCTGGGAAAG+GGG 0.521786 4:-87483979 MsG0480023600.01.T01:CDS
TACTGGAAAGTGACATCTCT+AGG 0.523786 4:-87483883 MsG0480023600.01.T01:exon
GGGTGTGACTAACCTGTATG+AGG 0.527818 4:+87491546 None:intergenic
TCAAAGACAGGTTTACCGGC+TGG 0.535673 4:+87483551 None:intergenic
CCAGTTTCTGCTGTTATTGG+GGG 0.535744 4:-87484104 MsG0480023600.01.T01:CDS
GGTTCTGTCCCGAAAGAAGC+TGG 0.535753 4:-87483596 MsG0480023600.01.T01:three_prime_UTR
TTTGATGCTTCTGATGGGAA+GGG 0.536125 4:-87483933 MsG0480023600.01.T01:CDS
AAAGGAGCTTTGTACTGCAC+AGG 0.559597 4:-87484273 MsG0480023600.01.T01:intron
GACCTTAATTGACGATAGAC+CGG 0.560595 4:-87488716 MsG0480023600.01.T01:CDS
TATGTTCTGGATTCTCCAGC+GGG 0.561241 4:-87483391 MsG0480023600.01.T01:three_prime_UTR
ACCAATAAAATACCTGTCCA+AGG 0.563530 4:+87484078 None:intergenic
GAAAGCAATTCCTCAGTGAC+CGG 0.564416 4:+87488697 None:intergenic
GAAGGACCTTCTTTGAGCAT+CGG 0.566700 4:+87489498 None:intergenic
TCAAAGACAGGTTTACCCGC+TGG 0.570135 4:+87483464 None:intergenic
GACCATCAAAACATTCTCCA+AGG 0.571682 4:-87483654 MsG0480023600.01.T01:three_prime_UTR
GTCGTGAAACAGGTTGCGGT+TGG 0.571778 4:-87489595 MsG0480023600.01.T01:intron
GACCGTCAGATTAGGGTTTG+GGG 0.571834 4:-87489523 MsG0480023600.01.T01:CDS
GGGGTGCCGATGCTCAAAGA+AGG 0.577600 4:-87489504 MsG0480023600.01.T01:intron
TATGATCTAGGTTCTCCAGC+GGG 0.583654 4:-87483479 MsG0480023600.01.T01:three_prime_UTR
ACGGCGAAGAGTTACGGCGC+AGG 0.585150 4:-87489560 MsG0480023600.01.T01:CDS
AGTAATAGAGAAGTTTGAAG+AGG 0.585773 4:-87484357 MsG0480023600.01.T01:CDS
AATTAACCAGGTTTACCCGC+TGG 0.586277 4:+87483376 None:intergenic
AAGTTATAAAAGCCTCGTGA+TGG 0.589116 4:-87483442 MsG0480023600.01.T01:three_prime_UTR
TGAAGTTAGAAAGCTTGTGA+TGG 0.595482 4:-87483531 MsG0480023600.01.T01:three_prime_UTR
CTATGTTCTGGATTCTCCAG+CGG 0.598323 4:-87483392 MsG0480023600.01.T01:three_prime_UTR
GAGAAGTTTGAAGAGGCTGA+AGG 0.603485 4:-87484350 MsG0480023600.01.T01:CDS
CACCCCAAACCCTAATCTGA+CGG 0.611151 4:+87489521 None:intergenic
AGAGGCTGAAGGACGTAGTG+CGG 0.615684 4:-87484339 MsG0480023600.01.T01:CDS
GTATGTTTAGGAATTAGGAT+AGG 0.618900 4:+87483303 None:intergenic
TGATACGAAACTCAAACTCG+TGG 0.623702 4:-87491610 MsG0480023600.01.T01:CDS
ATCACAACAAAGCTGAGCAA+TGG 0.625931 4:+87488627 None:intergenic
TTCGGGACAGAACCATCATG+AGG 0.628267 4:+87483605 None:intergenic
ATGTATGAGTACAATTAACC+AGG 0.632707 4:+87483364 None:intergenic
CCTAGAAAATAGAGAGACGA+TGG 0.640503 4:+87491242 None:intergenic
TTATACACATTCTCATCAGG+AGG 0.644434 4:+87488658 None:intergenic
ACCATCAAAACATTCTCCAA+GGG 0.646004 4:-87483653 MsG0480023600.01.T01:three_prime_UTR
CGGTTGGAAATGAACGGCGA+CGG 0.646571 4:-87489579 MsG0480023600.01.T01:CDS
TGTGGACCATTATAGGAACA+TGG 0.650449 4:-87491584 MsG0480023600.01.T01:CDS
GATATTACGATGTGATGCTG+AGG 0.662029 4:-87491310 MsG0480023600.01.T01:CDS
GATACGAAACTCAAACTCGT+GGG 0.663534 4:-87491609 MsG0480023600.01.T01:CDS
AATGAAAGGAACTATTGCTG+AGG 0.679461 4:-87489270 MsG0480023600.01.T01:intron
GTTGACTGTAGAGATTCTTG+CGG 0.683545 4:-87488196 MsG0480023600.01.T01:intron
TTCAGAACAGAACCATCACG+AGG 0.685793 4:+87483430 None:intergenic
GGTGTGACTAACCTGTATGA+GGG 0.694690 4:+87491547 None:intergenic
CCAATAACAGCAGAAACTGG+AGG 0.697573 4:+87484107 None:intergenic
TTATGATCTAGGTTCTCCAG+CGG 0.697682 4:-87483480 MsG0480023600.01.T01:three_prime_UTR
AGGTTGCGGTTGGAAATGAA+CGG 0.718698 4:-87489585 MsG0480023600.01.T01:CDS
TGACGATAGACCGGTCACTG+AGG 0.739868 4:-87488707 MsG0480023600.01.T01:CDS
AATCTGACGGTCATACAAAG+CGG 0.741130 4:+87489534 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATAATTTATTCTC+TGG + Chr4:87484838-87484857 None:intergenic 10.0%
!! AAATATAACAAAGAAATATT+TGG + Chr4:87483940-87483959 None:intergenic 10.0%
!! AATATAACAAAGAAATATTT+GGG + Chr4:87483939-87483958 None:intergenic 10.0%
!! ATAAATAAAGTTAAATTGTT+TGG - Chr4:87485776-87485795 MsG0480023600.01.T01:intron 10.0%
!! ATTACTATATATATGATATT+AGG - Chr4:87484262-87484281 MsG0480023600.01.T01:intron 10.0%
!! TAAATAAATTAGCAAAAATT+AGG + Chr4:87485460-87485479 None:intergenic 10.0%
!!! AAAAATATCTATATCTTTTA+TGG + Chr4:87484902-87484921 None:intergenic 10.0%
!!! AAAATAGAAAAAGTTTTTTA+TGG + Chr4:87490928-87490947 None:intergenic 10.0%
!!! AAATAGAAAAAGTTTTTTAT+GGG + Chr4:87490927-87490946 None:intergenic 10.0%
!!! TAATATATTACATACAATTT+TGG - Chr4:87484559-87484578 MsG0480023600.01.T01:intron 10.0%
!!! TCAAAATTTTACAATAAAAT+TGG - Chr4:87483729-87483748 MsG0480023600.01.T01:three_prime_UTR 10.0%
!! AAAATCCTTTAATTAAACTT+AGG - Chr4:87489268-87489287 MsG0480023600.01.T01:intron 15.0%
!! AAATCCTTTAATTAAACTTA+GGG - Chr4:87489269-87489288 MsG0480023600.01.T01:intron 15.0%
!! ATAGTAATTAGAAAATAGAA+AGG + Chr4:87485405-87485424 None:intergenic 15.0%
!! ATCATATATATAGTAATGTT+GGG + Chr4:87484259-87484278 None:intergenic 15.0%
!! TAGTTTATTATAACCTAATT+GGG + Chr4:87485053-87485072 None:intergenic 15.0%
!! TATCATATATATAGTAATGT+TGG + Chr4:87484260-87484279 None:intergenic 15.0%
!! TCTTATAAAAAAAAATGGTT+TGG + Chr4:87487697-87487716 None:intergenic 15.0%
!! TGAACAATTAAAATTACAAT+TGG + Chr4:87487326-87487345 None:intergenic 15.0%
!! TTAGTTTATTATAACCTAAT+TGG + Chr4:87485054-87485073 None:intergenic 15.0%
!!! AAACATAAGCTTTTTTTTTT+CGG + Chr4:87491380-87491399 None:intergenic 15.0%
!!! ATTTTATTATGAATTTCCAT+TGG - Chr4:87484289-87484308 MsG0480023600.01.T01:CDS 15.0%
!!! TCAAAATTATTGAATTTTGT+TGG - Chr4:87489596-87489615 MsG0480023600.01.T01:intron 15.0%
!!! TTTTTTCCTAATGATTTATT+AGG - Chr4:87486079-87486098 MsG0480023600.01.T01:intron 15.0%
!! AAAAAGAAAACAACTTGATA+AGG + Chr4:87486341-87486360 None:intergenic 20.0%
!! AAAAGAAAACAACTTGATAA+GGG + Chr4:87486340-87486359 None:intergenic 20.0%
!! AAAAGAGAAAAATCAGAAAA+TGG + Chr4:87487823-87487842 None:intergenic 20.0%
!! AAAGAAGATAATCAATGTAA+AGG + Chr4:87486969-87486988 None:intergenic 20.0%
!! AAGAAGATAATCAATGTAAA+GGG + Chr4:87486968-87486987 None:intergenic 20.0%
!! ACATACCTTAAAATTATTGT+CGG - Chr4:87484142-87484161 MsG0480023600.01.T01:CDS 20.0%
!! AGATAAATGTGATATCAATT+CGG + Chr4:87487353-87487372 None:intergenic 20.0%
!! AGTATTCTTAATGATGTTTA+TGG - Chr4:87487238-87487257 MsG0480023600.01.T01:intron 20.0%
!! ATTTACTATTGTAACATTAC+AGG - Chr4:87490869-87490888 MsG0480023600.01.T01:intron 20.0%
!! GCAGTTCTTATAAAAAAAAA+TGG + Chr4:87487702-87487721 None:intergenic 20.0%
!! TAATGTTACAATAGTAAATC+TGG + Chr4:87490868-87490887 None:intergenic 20.0%
!! TAATTAGAAAATAGAAAGGA+AGG + Chr4:87485401-87485420 None:intergenic 20.0%
!! TATCAAAACATAAGAGAAAA+AGG - Chr4:87483999-87484018 MsG0480023600.01.T01:intron 20.0%
!! TCATATATATAGTAATGTTG+GGG + Chr4:87484258-87484277 None:intergenic 20.0%
!! TTCCACATAAAAAATATCAT+TGG + Chr4:87489337-87489356 None:intergenic 20.0%
!! TTGAAATACTAAAAACTAGA+CGG + Chr4:87484371-87484390 None:intergenic 20.0%
!!! AAAAGCTATTTCTATAACTA+AGG - Chr4:87485753-87485772 MsG0480023600.01.T01:intron 20.0%
!!! AGACTTCAAGTTTTTTTTTT+CGG - Chr4:87486384-87486403 MsG0480023600.01.T01:intron 20.0%
!!! CAATTTTTATAGACATAGTT+CGG - Chr4:87488842-87488861 MsG0480023600.01.T01:intron 20.0%
!!! CTGAAAATGAAAAGTTATTT+TGG + Chr4:87484939-87484958 None:intergenic 20.0%
!!! GGATTTTTAACAAAAGATAA+AGG + Chr4:87489255-87489274 None:intergenic 20.0%
!!! TAAGTAACTTTTGTTAGTTT+AGG - Chr4:87485428-87485447 MsG0480023600.01.T01:intron 20.0%
!!! TTATTTCTCATCAATGAAAT+AGG - Chr4:87483848-87483867 MsG0480023600.01.T01:three_prime_UTR 20.0%
!!! TTCCAATGATATTTTTTATG+TGG - Chr4:87489332-87489351 MsG0480023600.01.T01:intron 20.0%
!!! TTTACACTTGTTTTTTTTTG+TGG - Chr4:87486359-87486378 MsG0480023600.01.T01:intron 20.0%
! AAAATTGTATAGAGACAGAT+CGG + Chr4:87487667-87487686 None:intergenic 25.0%
! AAAGAAAACAACTTGATAAG+GGG + Chr4:87486339-87486358 None:intergenic 25.0%
! AAAGCTTATGTTTATGATCT+AGG - Chr4:87491387-87491406 MsG0480023600.01.T01:intron 25.0%
! AAATAGAAGATCTGCAATTA+GGG - Chr4:87489653-87489672 MsG0480023600.01.T01:intron 25.0%
! AAATGCTGAAGTTGTTATAA+CGG + Chr4:87484740-87484759 None:intergenic 25.0%
! AAGAAAAAGAATCAGAGATA+TGG + Chr4:87487746-87487765 None:intergenic 25.0%
! AAGAACCTGTAAGATAATTT+CGG + Chr4:87485991-87486010 None:intergenic 25.0%
! AAGACCCTAAGTTTAATTAA+AGG + Chr4:87489276-87489295 None:intergenic 25.0%
! AATAGAGAGAATGAAAGAAA+AGG - Chr4:87488689-87488708 MsG0480023600.01.T01:CDS 25.0%
! AATTAAAGTCCTTACCTAAT+AGG + Chr4:87483428-87483447 None:intergenic 25.0%
! ACATAATTGCTTATGATAAG+TGG + Chr4:87485822-87485841 None:intergenic 25.0%
! AGAAAAAGAATCAGAGATAT+GGG + Chr4:87487745-87487764 None:intergenic 25.0%
! ATAGAGAGAATGAAAGAAAA+GGG - Chr4:87488690-87488709 MsG0480023600.01.T01:CDS 25.0%
! ATCATGAAAATAAATGCATG+GGG + Chr4:87487008-87487027 None:intergenic 25.0%
! ATTAAACTGTTATCCAAACA+TGG + Chr4:87485689-87485708 None:intergenic 25.0%
! ATTGATATCACATTTATCTC+AGG - Chr4:87487354-87487373 MsG0480023600.01.T01:intron 25.0%
! ATTTATGACACTGATGAATA+TGG - Chr4:87487058-87487077 MsG0480023600.01.T01:intron 25.0%
! CAAAAAAAGAATCAGATATG+TGG - Chr4:87488773-87488792 MsG0480023600.01.T01:intron 25.0%
! CATATATATAGTAATGTTGG+GGG + Chr4:87484257-87484276 None:intergenic 25.0%
! CATCATGAAAATAAATGCAT+GGG + Chr4:87487009-87487028 None:intergenic 25.0%
! CTAAAATGTTCATCACAATT+AGG - Chr4:87487389-87487408 MsG0480023600.01.T01:intron 25.0%
! CTAATGATTTATTAGGACTT+CGG - Chr4:87486086-87486105 MsG0480023600.01.T01:intron 25.0%
! GATCTTCTATGTATATGTTT+GGG - Chr4:87489700-87489719 MsG0480023600.01.T01:intron 25.0%
! GTACTTCTAAACTATTGTTA+TGG + Chr4:87487453-87487472 None:intergenic 25.0%
! GTTGCTCAAGTTATTATAAT+GGG - Chr4:87485001-87485020 MsG0480023600.01.T01:intron 25.0%
! TAAAATGCAACAATAATGAC+AGG + Chr4:87489221-87489240 None:intergenic 25.0%
! TAAATATAACCAGCTTCTTT+CGG + Chr4:87491294-87491313 None:intergenic 25.0%
! TAGCAGTTCTTCATAAAAAA+CGG - Chr4:87488813-87488832 MsG0480023600.01.T01:intron 25.0%
! TCATATGATAACCAATAGTT+AGG - Chr4:87486867-87486886 MsG0480023600.01.T01:intron 25.0%
! TCATCATGAAAATAAATGCA+TGG + Chr4:87487010-87487029 None:intergenic 25.0%
! TGATCTTCTATGTATATGTT+TGG - Chr4:87489699-87489718 MsG0480023600.01.T01:intron 25.0%
! TGGATAAAATGTGTGAAATA+AGG - Chr4:87490013-87490032 MsG0480023600.01.T01:intron 25.0%
! TGTTGCTCAAGTTATTATAA+TGG - Chr4:87485000-87485019 MsG0480023600.01.T01:intron 25.0%
! TTATGTCAAAAGAAAATGTG+TGG + Chr4:87484656-87484675 None:intergenic 25.0%
! TTCTAAACTATTGTTATGGT+CGG + Chr4:87487449-87487468 None:intergenic 25.0%
! TTGTGAAAAACAAGTTATCT+TGG - Chr4:87485901-87485920 MsG0480023600.01.T01:intron 25.0%
! TTTAATGTTCAATTCTTCCT+TGG - Chr4:87489128-87489147 MsG0480023600.01.T01:intron 25.0%
!! CACTAATTTTTCTACATTGA+CGG + Chr4:87483466-87483485 None:intergenic 25.0%
!! CGTTAAAGGAAATTTGAAAT+TGG + Chr4:87485264-87485283 None:intergenic 25.0%
!! TTATAACAACTTCAGCATTT+TGG - Chr4:87484740-87484759 MsG0480023600.01.T01:intron 25.0%
!!! AACTGCTATACCATTTTTTT+TGG - Chr4:87487716-87487735 MsG0480023600.01.T01:intron 25.0%
!!! ACAGTTTAATTTGAAGCTTA+TGG - Chr4:87485699-87485718 MsG0480023600.01.T01:intron 25.0%
!!! AGCAATTTGTTACAAAGATA+TGG + Chr4:87489039-87489058 None:intergenic 25.0%
!!! ATTTTAAGGTATGTTATACG+AGG + Chr4:87484136-87484155 None:intergenic 25.0%
!!! GACTTCAAGTTTTTTTTTTC+GGG - Chr4:87486385-87486404 MsG0480023600.01.T01:intron 25.0%
!!! GCAATTTGTTACAAAGATAT+GGG + Chr4:87489038-87489057 None:intergenic 25.0%
!!! GTCTTTCCATTTTTTTTTTG+TGG - Chr4:87483528-87483547 MsG0480023600.01.T01:three_prime_UTR 25.0%
!!! TAGTACCGACAATAATTTTA+AGG + Chr4:87484150-87484169 None:intergenic 25.0%
!!! TGCATTTATTTTCATGATGA+TGG - Chr4:87487010-87487029 MsG0480023600.01.T01:intron 25.0%
!!! TTAGTTGATTTGTTTCATCT+CGG - Chr4:87490237-87490256 MsG0480023600.01.T01:intron 25.0%
!!! TTTTTACTGTTGGTTAAGTT+TGG - Chr4:87485214-87485233 MsG0480023600.01.T01:intron 25.0%
AAAAAATGGAAAGACACGTT+TGG + Chr4:87483523-87483542 None:intergenic 30.0%
AAAAATAGACTCTTAAGTCG+TGG + Chr4:87488312-87488331 None:intergenic 30.0%
AAACCTATCACTTGTCTATA+TGG - Chr4:87485632-87485651 MsG0480023600.01.T01:intron 30.0%
AAAGCTCATGTCTTAGTTTA+TGG - Chr4:87485585-87485604 MsG0480023600.01.T01:intron 30.0%
AAATATAACCAGCTTCTTTC+GGG + Chr4:87491293-87491312 None:intergenic 30.0%
AACAAATAAGCAGAAAATCG+CGG + Chr4:87485183-87485202 None:intergenic 30.0%
AACCAATAGTTAGGCATATA+CGG - Chr4:87486876-87486895 MsG0480023600.01.T01:intron 30.0%
AATTGCAATCGATAAACTTC+AGG + Chr4:87490449-87490468 None:intergenic 30.0%
ACTTAAAGACTTCAATCCTA+TGG - Chr4:87486276-87486295 MsG0480023600.01.T01:intron 30.0%
AGAGAAAAATCAGAAAATGG+TGG + Chr4:87487820-87487839 None:intergenic 30.0%
AGAGAATCTAATGTACAACA+TGG + Chr4:87489568-87489587 None:intergenic 30.0%
AGCTGGTTATATTTATGTTC+TGG - Chr4:87491299-87491318 MsG0480023600.01.T01:CDS 30.0%
AGGTTATCAAAGCAATTTCT+GGG - Chr4:87490892-87490911 MsG0480023600.01.T01:intron 30.0%
AGTAATAGAGAAGTTTGAAG+AGG - Chr4:87490521-87490540 MsG0480023600.01.T01:intron 30.0%
AGTATAAAATGCTACACGTT+TGG + Chr4:87486662-87486681 None:intergenic 30.0%
ATAGAGAAAATAACACCGAA+AGG + Chr4:87483382-87483401 None:intergenic 30.0%
ATATGGGGAACCAAAAAAAA+TGG + Chr4:87487729-87487748 None:intergenic 30.0%
ATCTAATGCAAGTAAATGAC+TGG + Chr4:87489429-87489448 None:intergenic 30.0%
ATGAATTTAACATAACCCCA+TGG + Chr4:87489454-87489473 None:intergenic 30.0%
ATGTATGAGTACAATTAACC+AGG + Chr4:87491517-87491536 None:intergenic 30.0%
CAAATAGAAGATCTGCAATT+AGG - Chr4:87489652-87489671 MsG0480023600.01.T01:intron 30.0%
CAAGTGTATGTTTAGGAATT+AGG + Chr4:87491583-87491602 None:intergenic 30.0%
CAATGTTCTTAAGCTGAAAA+AGG - Chr4:87490587-87490606 MsG0480023600.01.T01:intron 30.0%
CAGCTAACATTATAACAGTT+TGG - Chr4:87488885-87488904 MsG0480023600.01.T01:intron 30.0%
CGAAGTCCTAATAAATCATT+AGG + Chr4:87486088-87486107 None:intergenic 30.0%
CTAATACATTCTGTAGACTT+AGG - Chr4:87484200-87484219 MsG0480023600.01.T01:intron 30.0%
CTAATTCCTAAACATACACT+TGG - Chr4:87491581-87491600 MsG0480023600.01.T01:CDS 30.0%
CTACAAATGATTGTATTACG+AGG - Chr4:87487870-87487889 MsG0480023600.01.T01:intron 30.0%
CTTAATGATGTTTATGGTAG+TGG - Chr4:87487244-87487263 MsG0480023600.01.T01:intron 30.0%
GAAAAAGAATCAGAGATATG+GGG + Chr4:87487744-87487763 None:intergenic 30.0%
GAATGAAAGAAAAGGGAAAA+TGG - Chr4:87488697-87488716 MsG0480023600.01.T01:CDS 30.0%
GACATATCTGATTCAAATAC+TGG - Chr4:87490978-87490997 MsG0480023600.01.T01:intron 30.0%
GCAGGACTATAAATATCAAA+AGG - Chr4:87486723-87486742 MsG0480023600.01.T01:intron 30.0%
GCTGGTTATATTTATGTTCT+GGG - Chr4:87491300-87491319 MsG0480023600.01.T01:CDS 30.0%
GGGTCTTGAATAAATTTCTT+GGG + Chr4:87484589-87484608 None:intergenic 30.0%
GGTCTTGAATAAATTTCTTG+GGG + Chr4:87484588-87484607 None:intergenic 30.0%
GTATGTTTAGGAATTAGGAT+AGG + Chr4:87491578-87491597 None:intergenic 30.0%
GTCTTAGTTTATGGAATGAA+AGG - Chr4:87485594-87485613 MsG0480023600.01.T01:intron 30.0%
GTCTTGAATAAATTTCTTGG+GGG + Chr4:87484587-87484606 None:intergenic 30.0%
GTTCAAATAACAGAACCTTA+CGG + Chr4:87483681-87483700 None:intergenic 30.0%
GTTCTTCATAAAAAACGGTT+TGG - Chr4:87488818-87488837 MsG0480023600.01.T01:intron 30.0%
TAAAAAGCTTAAGAAGAGAG+AGG - Chr4:87490124-87490143 MsG0480023600.01.T01:intron 30.0%
TACTATTGTAACATTACAGG+AGG - Chr4:87490872-87490891 MsG0480023600.01.T01:intron 30.0%
TAGATTGGCAATGTGAAATT+AGG - Chr4:87488611-87488630 MsG0480023600.01.T01:CDS 30.0%
TATGTATGTCGAATTTGAAC+CGG - Chr4:87486820-87486839 MsG0480023600.01.T01:intron 30.0%
TATTCAAGTCAATTAAGAGC+TGG - Chr4:87490041-87490060 MsG0480023600.01.T01:intron 30.0%
TCAAAAAAAAAGGTTCCTGT+GGG - Chr4:87484453-87484472 MsG0480023600.01.T01:intron 30.0%
TCAAATTCGACATACATACT+CGG + Chr4:87486818-87486837 None:intergenic 30.0%
TCAGTTGACAAGCTTAAATA+AGG - Chr4:87486014-87486033 MsG0480023600.01.T01:intron 30.0%
TCTAATGCAAGTAAATGACT+GGG + Chr4:87489428-87489447 None:intergenic 30.0%
TGAAGTTAGAACTTGAAGAA+TGG - Chr4:87488502-87488521 MsG0480023600.01.T01:intron 30.0%
TGAATTTAACATAACCCCAT+GGG + Chr4:87489453-87489472 None:intergenic 30.0%
TGTAATGTAAACAGAAGGAT+TGG + Chr4:87490684-87490703 None:intergenic 30.0%
TGTGGACAATGAATTTCAAA+GGG + Chr4:87484638-87484657 None:intergenic 30.0%
TGTTATAATGTTAGCTGAAC+CGG + Chr4:87488882-87488901 None:intergenic 30.0%
TTACCATATAGACAAGTGAT+AGG + Chr4:87485638-87485657 None:intergenic 30.0%
TTCAAAAAAAAAGGTTCCTG+TGG - Chr4:87484452-87484471 MsG0480023600.01.T01:intron 30.0%
TTCAAATAACAGAACCTTAC+GGG + Chr4:87483680-87483699 None:intergenic 30.0%
TTCTTCTTCAAACTATGCTA+CGG + Chr4:87488671-87488690 None:intergenic 30.0%
TTGACTTAGACCAACATATT+AGG - Chr4:87485663-87485682 MsG0480023600.01.T01:intron 30.0%
TTGATAAGAGTGAGAAAACA+AGG + Chr4:87483985-87484004 None:intergenic 30.0%
! AAAAAGAAAAAGGCATACCT+AGG + Chr4:87489897-87489916 None:intergenic 30.0%
! AGCTTTGATGTAGAATTCTT+CGG - Chr4:87486470-87486489 MsG0480023600.01.T01:intron 30.0%
! AGGTATTTTATTGGTCATCA+TGG - Chr4:87490808-87490827 MsG0480023600.01.T01:intron 30.0%
! CCTAAAATATCCAAGTTTTG+AGG - Chr4:87489183-87489202 MsG0480023600.01.T01:intron 30.0%
! CCTCAAAACTTGGATATTTT+AGG + Chr4:87489186-87489205 None:intergenic 30.0%
! CTTAAATAAGGCATTCCAAA+AGG - Chr4:87486026-87486045 MsG0480023600.01.T01:intron 30.0%
! GCTTTTATAACTTCAAAGAC+AGG + Chr4:87491429-87491448 None:intergenic 30.0%
! GTGCTAATTATCTAGAACTT+TGG + Chr4:87489072-87489091 None:intergenic 30.0%
! GTTTAGAACTTCATATTCCT+AGG - Chr4:87489877-87489896 MsG0480023600.01.T01:intron 30.0%
! GTTTTGCAAGAATATTGTTC+TGG - Chr4:87486123-87486142 MsG0480023600.01.T01:intron 30.0%
! TAGACTTAGGCAAATAGTTT+TGG - Chr4:87484213-87484232 MsG0480023600.01.T01:intron 30.0%
! TCACAAGTAGTTTAGTTTAG+AGG - Chr4:87490158-87490177 MsG0480023600.01.T01:intron 30.0%
! TGTTGGCTATTTGACAATAA+TGG - Chr4:87488979-87488998 MsG0480023600.01.T01:CDS 30.0%
!! ACGAGATTTTGATAGAAGAT+AGG + Chr4:87488339-87488358 None:intergenic 30.0%
!! ATAGTTTAGAAGTACTGAAC+TGG - Chr4:87487458-87487477 MsG0480023600.01.T01:intron 30.0%
!! ATGGAAGATGCAATTTTGAT+AGG - Chr4:87488138-87488157 MsG0480023600.01.T01:intron 30.0%
!! CAAAACTTGGATATTTTAGG+TGG + Chr4:87489183-87489202 None:intergenic 30.0%
!! CGAGATTTTGATAGAAGATA+GGG + Chr4:87488338-87488357 None:intergenic 30.0%
!! GAAATAGGAGTACTATTAAC+CGG - Chr4:87483863-87483882 MsG0480023600.01.T01:three_prime_UTR 30.0%
!! TACATAGCATGAGTTTGTTT+TGG + Chr4:87489804-87489823 None:intergenic 30.0%
!! TGTAACAAATTGCTTTTGCT+GGG - Chr4:87489045-87489064 MsG0480023600.01.T01:intron 30.0%
!! TTGTAACAAATTGCTTTTGC+TGG - Chr4:87489044-87489063 MsG0480023600.01.T01:intron 30.0%
!!! ATGAGTTTGTTTTGGACATA+AGG + Chr4:87489796-87489815 None:intergenic 30.0%
!!! CTTTTTCAGCTTAAGAACAT+TGG + Chr4:87490589-87490608 None:intergenic 30.0%
!!! GTTTCTCACTTTTTTACTGT+TGG - Chr4:87485204-87485223 MsG0480023600.01.T01:intron 30.0%
!!! TAACCTAATTGGGCTTTTTT+TGG + Chr4:87485043-87485062 None:intergenic 30.0%
!!! TAAGCTATGCAACTTTTTTG+TGG - Chr4:87489993-87490012 MsG0480023600.01.T01:intron 30.0%
!!! TCTATTTTGATGCTTCTGAT+GGG - Chr4:87490940-87490959 MsG0480023600.01.T01:intron 30.0%
!!! TTCCATTTTTTTTTTGTGGC+TGG - Chr4:87483532-87483551 MsG0480023600.01.T01:three_prime_UTR 30.0%
!!! TTCTATTTTGATGCTTCTGA+TGG - Chr4:87490939-87490958 MsG0480023600.01.T01:intron 30.0%
!!! TTGGTAACGCATTTTGTTTT+CGG + Chr4:87486933-87486952 None:intergenic 30.0%
!!! TTGGTTTTGCTTTAAGACAA+TGG - Chr4:87489615-87489634 MsG0480023600.01.T01:intron 30.0%
AAAACAACTTGATAAGGGGA+GGG + Chr4:87486335-87486354 None:intergenic 35.0%
AAAAGGCTTAGTGTGTGAAA+TGG - Chr4:87486043-87486062 MsG0480023600.01.T01:intron 35.0%
AAACACATTGCCTTTCCTTT+CGG - Chr4:87483364-87483383 MsG0480023600.01.T01:three_prime_UTR 35.0%
AAAGGCTTAGTGTGTGAAAT+GGG - Chr4:87486044-87486063 MsG0480023600.01.T01:intron 35.0%
AACAAGAGATCAATTGTGAC+CGG + Chr4:87486842-87486861 None:intergenic 35.0%
AACCTACATACCTCAAAACT+TGG + Chr4:87489196-87489215 None:intergenic 35.0%
AACTAGCCAATGAAAAATGC+CGG - Chr4:87486629-87486648 MsG0480023600.01.T01:intron 35.0%
AACTTCAAAGACAGGTTTAC+CGG + Chr4:87491334-87491353 None:intergenic 35.0%
AAGCGGTGATGTGAAAAATT+GGG + Chr4:87487786-87487805 None:intergenic 35.0%
AAGTTATAAAAGCCTCGTGA+TGG - Chr4:87491436-87491455 MsG0480023600.01.T01:intron 35.0%
AATAAATGCATGGGGATTGA+CGG + Chr4:87487000-87487019 None:intergenic 35.0%
AATCCAGTTCAGTTCAGTTT+GGG + Chr4:87487607-87487626 None:intergenic 35.0%
AATGAAAGGAACTATTGCTG+AGG - Chr4:87485608-87485627 MsG0480023600.01.T01:intron 35.0%
ACAAACACACAAGCTTCTAA+AGG - Chr4:87489751-87489770 MsG0480023600.01.T01:intron 35.0%
ACCAAATATCCTTCATGTCA+AGG + Chr4:87489382-87489401 None:intergenic 35.0%
ACCAATAAAATACCTGTCCA+AGG + Chr4:87490803-87490822 None:intergenic 35.0%
ACCATCAAAACATTCTCCAA+GGG - Chr4:87491225-87491244 MsG0480023600.01.T01:CDS 35.0%
ACCTTGACATGAAGGATATT+TGG - Chr4:87489378-87489397 MsG0480023600.01.T01:intron 35.0%
AGATATGGGCAAAACAAACA+AGG + Chr4:87489024-87489043 None:intergenic 35.0%
AGCTTTCTAACTTCAAAGAC+AGG + Chr4:87491342-87491361 None:intergenic 35.0%
AGTAGCAAAAACATGGAAGA+AGG + Chr4:87486555-87486574 None:intergenic 35.0%
AGTATAGAAACATGCCCTAA+TGG - Chr4:87490365-87490384 MsG0480023600.01.T01:intron 35.0%
AGTCAGTAAGGGAAAATTTG+AGG - Chr4:87487147-87487166 MsG0480023600.01.T01:intron 35.0%
AGTCCAAAAAAAGCCCAATT+AGG - Chr4:87485037-87485056 MsG0480023600.01.T01:intron 35.0%
ATCAAACCACTAATCCAGTT+CGG + Chr4:87487509-87487528 None:intergenic 35.0%
ATCACAATTAGGACTGTTCA+TGG - Chr4:87487400-87487419 MsG0480023600.01.T01:intron 35.0%
ATCCGTATATGCCTAACTAT+TGG + Chr4:87486881-87486900 None:intergenic 35.0%
ATCTTTCATTGAAATTGCGC+GGG - Chr4:87484332-87484351 MsG0480023600.01.T01:CDS 35.0%
ATGTACATGACTGAAGAAGT+AGG - Chr4:87484690-87484709 MsG0480023600.01.T01:intron 35.0%
ATGTGATAACCTTGACATGA+AGG - Chr4:87489370-87489389 MsG0480023600.01.T01:intron 35.0%
CAAAAAAAAAGGTTCCTGTG+GGG - Chr4:87484454-87484473 MsG0480023600.01.T01:intron 35.0%
CATAGAAGATCAACACAGAA+TGG + Chr4:87489691-87489710 None:intergenic 35.0%
CATTATAGGAACATGGAATC+AGG - Chr4:87483301-87483320 MsG0480023600.01.T01:three_prime_UTR 35.0%
CCATTATACACATTCTCATC+AGG + Chr4:87486226-87486245 None:intergenic 35.0%
CCTGATGAGAATGTGTATAA+TGG - Chr4:87486223-87486242 MsG0480023600.01.T01:intron 35.0%
CGGGTCTTGAATAAATTTCT+TGG + Chr4:87484590-87484609 None:intergenic 35.0%
CTGATTCCATGTTCCTATAA+TGG + Chr4:87483303-87483322 None:intergenic 35.0%
CTGGAAATCTTGGTTGTTAA+TGG - Chr4:87491040-87491059 MsG0480023600.01.T01:intron 35.0%
GAAAATAACACCGAAAGGAA+AGG + Chr4:87483377-87483396 None:intergenic 35.0%
GAAACAATACTCTTAAGTCG+TGG - Chr4:87488171-87488190 MsG0480023600.01.T01:intron 35.0%
GAACATATTGAGAGTCTTTG+GGG + Chr4:87489315-87489334 None:intergenic 35.0%
GAAGTTACAAATCCTCATGA+TGG - Chr4:87491261-87491280 MsG0480023600.01.T01:CDS 35.0%
GAGAATGAAAATTCGTCTCA+GGG + Chr4:87485130-87485149 None:intergenic 35.0%
GAGACTGTAATGTAAACAGA+AGG + Chr4:87490689-87490708 None:intergenic 35.0%
GAGCTGTAGCAAAAAGAAAA+AGG + Chr4:87489907-87489926 None:intergenic 35.0%
GAGGTTATCAAAGCAATTTC+TGG - Chr4:87490891-87490910 MsG0480023600.01.T01:intron 35.0%
GATCTTTCATTGAAATTGCG+CGG - Chr4:87484331-87484350 MsG0480023600.01.T01:CDS 35.0%
GATGACACTTCATCATTGTT+CGG + Chr4:87488046-87488065 None:intergenic 35.0%
GCAATGTGTTTGAAAGAGTT+GGG + Chr4:87483355-87483374 None:intergenic 35.0%
GCGCAATTTCAATGAAAGAT+CGG + Chr4:87484332-87484351 None:intergenic 35.0%
GGAACATATTGAGAGTCTTT+GGG + Chr4:87489316-87489335 None:intergenic 35.0%
GGTGTCTGGTCTAATATATT+AGG - Chr4:87490078-87490097 MsG0480023600.01.T01:intron 35.0%
GTGGACAATGAATTTCAAAG+GGG + Chr4:87484637-87484656 None:intergenic 35.0%
GTGTGGACAATGAATTTCAA+AGG + Chr4:87484639-87484658 None:intergenic 35.0%
GTTAAAAAAAACGGTGGTGT+TGG - Chr4:87488557-87488576 MsG0480023600.01.T01:intron 35.0%
GTTAATGGAAGTTGAATTCG+CGG + Chr4:87485161-87485180 None:intergenic 35.0%
GTTCTCCGAAATTATCTTAC+AGG - Chr4:87485983-87486002 MsG0480023600.01.T01:intron 35.0%
TAAAGGGAAGTAACACAGTT+TGG + Chr4:87486952-87486971 None:intergenic 35.0%
TAAAGTCATCATCGTCTGTA+AGG - Chr4:87487092-87487111 MsG0480023600.01.T01:intron 35.0%
TAATCCAGTTCAGTTCAGTT+TGG + Chr4:87487608-87487627 None:intergenic 35.0%
TCTTCCTTGGCAGAAAAAAA+TGG - Chr4:87489141-87489160 MsG0480023600.01.T01:intron 35.0%
TCTTCTTCAAACTATGCTAC+GGG + Chr4:87488670-87488689 None:intergenic 35.0%
TGAAAGAAAAGGGAAAATGG+TGG - Chr4:87488700-87488719 MsG0480023600.01.T01:CDS 35.0%
TGAAGTTAGAAAGCTTGTGA+TGG - Chr4:87491347-87491366 MsG0480023600.01.T01:intron 35.0%
TGAGAATGAAAATTCGTCTC+AGG + Chr4:87485131-87485150 None:intergenic 35.0%
TGCATCTTCCATTCTATCTA+CGG + Chr4:87488130-87488149 None:intergenic 35.0%
TGCCAGCCACAAAAAAAAAA+TGG + Chr4:87483537-87483556 None:intergenic 35.0%
TGGAACATATTGAGAGTCTT+TGG + Chr4:87489317-87489336 None:intergenic 35.0%
TGGACAATGAATTTCAAAGG+GGG + Chr4:87484636-87484655 None:intergenic 35.0%
TGGCAATGTGAAATTAGGAA+GGG - Chr4:87488616-87488635 MsG0480023600.01.T01:CDS 35.0%
TGTACATGACTGAAGAAGTA+GGG - Chr4:87484691-87484710 MsG0480023600.01.T01:intron 35.0%
TGTACATTAGATTCTCTTGC+AGG - Chr4:87489571-87489590 MsG0480023600.01.T01:CDS 35.0%
TGTGACAAATTAGATCCACA+GGG + Chr4:87486755-87486774 None:intergenic 35.0%
TTAGTTTAGAGGTGAAAGCA+AGG - Chr4:87490169-87490188 MsG0480023600.01.T01:intron 35.0%
TTATACACATTCTCATCAGG+AGG + Chr4:87486223-87486242 None:intergenic 35.0%
TTCTAGATAATTAGCACCTG+TGG - Chr4:87489075-87489094 MsG0480023600.01.T01:intron 35.0%
TTGGCAATGTGAAATTAGGA+AGG - Chr4:87488615-87488634 MsG0480023600.01.T01:CDS 35.0%
TTTGTATGACCGTCAGATTA+GGG - Chr4:87485348-87485367 MsG0480023600.01.T01:intron 35.0%
! AAGGAGTTTTCACTGTACTT+TGG + Chr4:87486536-87486555 None:intergenic 35.0%
! ACTCCTAATTTTTCACACCA+CGG + Chr4:87488739-87488758 None:intergenic 35.0%
! ATCAAAGCAATTTCTGGGAA+AGG - Chr4:87490897-87490916 MsG0480023600.01.T01:intron 35.0%
! ATTTCACACACTAAGCCTTT+TGG + Chr4:87486044-87486063 None:intergenic 35.0%
! CAGTTAATTTCAGTGCGTTT+TGG + Chr4:87487301-87487320 None:intergenic 35.0%
! GGTTACAATTTTTCTGTTCC+TGG + Chr4:87483618-87483637 None:intergenic 35.0%
! TCAAAGCAATTTCTGGGAAA+GGG - Chr4:87490898-87490917 MsG0480023600.01.T01:intron 35.0%
! TCATCGACTATGATGATGAA+GGG - Chr4:87488061-87488080 MsG0480023600.01.T01:intron 35.0%
! TCCTTGGACAGGTATTTTAT+TGG - Chr4:87490799-87490818 MsG0480023600.01.T01:intron 35.0%
! TGAAGTTTTTGTTGATCTGC+AGG - Chr4:87486705-87486724 MsG0480023600.01.T01:intron 35.0%
! TGATACTCTTCTGGAAAGAT+TGG - Chr4:87490728-87490747 MsG0480023600.01.T01:intron 35.0%
! TGTTTCTTTTTCTGAGTCAC+TGG - Chr4:87491021-87491040 MsG0480023600.01.T01:intron 35.0%
!! AATCTTTCCAGAAGAGTATC+AGG + Chr4:87490729-87490748 None:intergenic 35.0%
!! AGCTTGTTATGTCTATGTTC+TGG - Chr4:87491474-87491493 MsG0480023600.01.T01:intron 35.0%
!! ATAGTTTAGAAGTACTGACC+TGG - Chr4:87487567-87487586 MsG0480023600.01.T01:intron 35.0%
!! ATTTAGAGCGTTGACGATTT+AGG - Chr4:87491157-87491176 MsG0480023600.01.T01:intron 35.0%
!! TGATGTTTATGGTAGTGGAT+AGG - Chr4:87487249-87487268 MsG0480023600.01.T01:intron 35.0%
!! TTTAGAGCGTTGACGATTTA+GGG - Chr4:87491158-87491177 MsG0480023600.01.T01:intron 35.0%
!!! AATTGGGCTTTTTTTGGACT+GGG + Chr4:87485037-87485056 None:intergenic 35.0%
!!! ATCCAAGTTTTGAGGTATGT+AGG - Chr4:87489191-87489210 MsG0480023600.01.T01:intron 35.0%
!!! ATTTTCCCTTACTGACTTCT+AGG + Chr4:87487144-87487163 None:intergenic 35.0%
!!! ATTTTTTTTTTGTGGCTGGC+AGG - Chr4:87483536-87483555 MsG0480023600.01.T01:three_prime_UTR 35.0%
!!! CTTGTGTGTTTGTTTTGCAA+TGG + Chr4:87489744-87489763 None:intergenic 35.0%
!!! TAATTGGGCTTTTTTTGGAC+TGG + Chr4:87485038-87485057 None:intergenic 35.0%
!!! TTTTTTTTTTGTGGCTGGCA+GGG - Chr4:87483537-87483556 MsG0480023600.01.T01:three_prime_UTR 35.0%
AAACAACTTGATAAGGGGAG+GGG + Chr4:87486334-87486353 None:intergenic 40.0%
AACCTGTTTCACGACGTTAA+AGG + Chr4:87485278-87485297 None:intergenic 40.0%
AACGGCGGCGTTAAAAAAAA+CGG - Chr4:87488548-87488567 MsG0480023600.01.T01:intron 40.0%
AAGCAGAAAATCGCGGTTAA+TGG + Chr4:87485176-87485195 None:intergenic 40.0%
AAGCCAGAGTAGCAAAAACA+TGG + Chr4:87486562-87486581 None:intergenic 40.0%
AAGCTGTACTTTGCAATGAG+AGG - Chr4:87489965-87489984 MsG0480023600.01.T01:intron 40.0%
AATCCAGTTCGGTTCAGTTT+GGG + Chr4:87487498-87487517 None:intergenic 40.0%
AATCTGACGGTCATACAAAG+CGG + Chr4:87485347-87485366 None:intergenic 40.0%
AATGACGGTGAGTACAATTG+TGG + Chr4:87488281-87488300 None:intergenic 40.0%
ACAAACTACAATCGACAGCT+AGG + Chr4:87488962-87488981 None:intergenic 40.0%
ACATTGCCAATCTACAAGTG+GGG + Chr4:87488605-87488624 None:intergenic 40.0%
ACCTAATAGGACAGATGACA+TGG + Chr4:87483415-87483434 None:intergenic 40.0%
ACCTAGTACATGACAGGAAA+AGG + Chr4:87489536-87489555 None:intergenic 40.0%
ACTGAACAGAACCATAACAG+TGG + Chr4:87488918-87488937 None:intergenic 40.0%
AGAGAAGTTGCCGGATTATT+TGG - Chr4:87488098-87488117 MsG0480023600.01.T01:intron 40.0%
AGAGTGACAGTGTGTACAAA+TGG - Chr4:87488200-87488219 MsG0480023600.01.T01:CDS 40.0%
AGGACCAAATCACATAAAGC+AGG - Chr4:87487167-87487186 MsG0480023600.01.T01:intron 40.0%
AGGCTCTATCACTAATTGCA+AGG + Chr4:87487124-87487143 None:intergenic 40.0%
ATAGAGCCTAGAAGTCAGTA+AGG - Chr4:87487135-87487154 MsG0480023600.01.T01:intron 40.0%
ATCAACTTCTTCCTCACATC+TGG - Chr4:87488394-87488413 MsG0480023600.01.T01:intron 40.0%
ATCACAACAAAGCTGAGCAA+TGG + Chr4:87486254-87486273 None:intergenic 40.0%
ATCCAGTTCAGTTCAGTTTG+GGG + Chr4:87487606-87487625 None:intergenic 40.0%
ATCTTCCATTCTATCTACGG+CGG + Chr4:87488127-87488146 None:intergenic 40.0%
ATTGTTCAGAACCAATCGCT+TGG - Chr4:87488458-87488477 MsG0480023600.01.T01:intron 40.0%
ATTTCAAAGGGGGTCAGTTT+AGG + Chr4:87484626-87484645 None:intergenic 40.0%
CACATTGCCAATCTACAAGT+GGG + Chr4:87488606-87488625 None:intergenic 40.0%
CCAAACATGGCCTAATATGT+TGG + Chr4:87485676-87485695 None:intergenic 40.0%
CCAACATATTAGGCCATGTT+TGG - Chr4:87485673-87485692 MsG0480023600.01.T01:intron 40.0%
CCTAGAAAATAGAGAGACGA+TGG + Chr4:87483639-87483658 None:intergenic 40.0%
CGAGGTTTAGAAGAAGACAA+TGG - Chr4:87487888-87487907 MsG0480023600.01.T01:intron 40.0%
CGGAAACAACCACTTGATTA+GGG + Chr4:87488026-87488045 None:intergenic 40.0%
CTCCAGTTTCTGCTGTTATT+GGG - Chr4:87490772-87490791 MsG0480023600.01.T01:intron 40.0%
CTGTGACAAATTAGATCCAC+AGG + Chr4:87486756-87486775 None:intergenic 40.0%
CTTCTTCAAACTATGCTACG+GGG + Chr4:87488669-87488688 None:intergenic 40.0%
CTTTGTATGACCGTCAGATT+AGG - Chr4:87485347-87485366 MsG0480023600.01.T01:intron 40.0%
GAAAACAACTTGATAAGGGG+AGG + Chr4:87486336-87486355 None:intergenic 40.0%
GAAGCGGTGATGTGAAAAAT+TGG + Chr4:87487787-87487806 None:intergenic 40.0%
GACAAGACGAACAAAAGAGA+AGG + Chr4:87486434-87486453 None:intergenic 40.0%
GACCATCAAAACATTCTCCA+AGG - Chr4:87491224-87491243 MsG0480023600.01.T01:CDS 40.0%
GACCTTAATTGACGATAGAC+CGG - Chr4:87486162-87486181 MsG0480023600.01.T01:intron 40.0%
GATACGAAACTCAAACTCGT+GGG - Chr4:87483269-87483288 MsG0480023600.01.T01:three_prime_UTR 40.0%
GATATTACGATGTGATGCTG+AGG - Chr4:87483568-87483587 MsG0480023600.01.T01:three_prime_UTR 40.0%
GGAAACAACCACTTGATTAG+GGG + Chr4:87488025-87488044 None:intergenic 40.0%
GGCAATGTGTTTGAAAGAGT+TGG + Chr4:87483356-87483375 None:intergenic 40.0%
GGTTCCTGCTTTATGTGATT+TGG + Chr4:87487174-87487193 None:intergenic 40.0%
GTACATGACTGAAGAAGTAG+GGG - Chr4:87484692-87484711 MsG0480023600.01.T01:intron 40.0%
GTCATCTGTCCTATTAGGTA+AGG - Chr4:87483416-87483435 MsG0480023600.01.T01:three_prime_UTR 40.0%
GTGAAATTGTGAAGGGGTTT+GGG + Chr4:87487922-87487941 None:intergenic 40.0%
GTGACAAATTAGATCCACAG+GGG + Chr4:87486754-87486773 None:intergenic 40.0%
GTGATGTGAAAAATTGGGAG+TGG + Chr4:87487781-87487800 None:intergenic 40.0%
GTGGTGTGAAAAATTAGGAG+TGG - Chr4:87488738-87488757 MsG0480023600.01.T01:CDS 40.0%
GTTCGTCCAAGTGTATGTTT+AGG + Chr4:87491590-87491609 None:intergenic 40.0%
GTTCGTGTCTTTGTGGATAA+AGG - Chr4:87486298-87486317 MsG0480023600.01.T01:intron 40.0%
GTTGACTGTAGAGATTCTTG+CGG - Chr4:87486682-87486701 MsG0480023600.01.T01:intron 40.0%
TAAGCTCTCTCTCTCCATTA+GGG + Chr4:87490382-87490401 None:intergenic 40.0%
TAATCCAGTTCGGTTCAGTT+TGG + Chr4:87487499-87487518 None:intergenic 40.0%
TACATGACTGAAGAAGTAGG+GGG - Chr4:87484693-87484712 MsG0480023600.01.T01:intron 40.0%
TACTGGAAAGTGACATCTCT+AGG - Chr4:87490995-87491014 MsG0480023600.01.T01:intron 40.0%
TACTTGCATTAGATGCCCAT+GGG - Chr4:87489435-87489454 MsG0480023600.01.T01:intron 40.0%
TAGAGCCTAGAAGTCAGTAA+GGG - Chr4:87487136-87487155 MsG0480023600.01.T01:intron 40.0%
TCACATTGCCAATCTACAAG+TGG + Chr4:87488607-87488626 None:intergenic 40.0%
TCCAGTTTCTGCTGTTATTG+GGG - Chr4:87490773-87490792 MsG0480023600.01.T01:intron 40.0%
TCCATGTCATCTGTCCTATT+AGG - Chr4:87483411-87483430 MsG0480023600.01.T01:three_prime_UTR 40.0%
TCCTTGGCAGAAAAAAATGG+AGG - Chr4:87489144-87489163 MsG0480023600.01.T01:intron 40.0%
TCGGAAACAACCACTTGATT+AGG + Chr4:87488027-87488046 None:intergenic 40.0%
TCTTCAGTCATGTACATGTG+TGG + Chr4:87484687-87484706 None:intergenic 40.0%
TGAACAGCAATTGATACTGC+TGG + Chr4:87487970-87487989 None:intergenic 40.0%
TGACTCATGTTTGAGTAGCT+TGG + Chr4:87484174-87484193 None:intergenic 40.0%
TGATACGAAACTCAAACTCG+TGG - Chr4:87483268-87483287 MsG0480023600.01.T01:three_prime_UTR 40.0%
TGCAAGAATATTGTTCTGGC+TGG - Chr4:87486127-87486146 MsG0480023600.01.T01:intron 40.0%
TGTGAAATTGTGAAGGGGTT+TGG + Chr4:87487923-87487942 None:intergenic 40.0%
TGTGGACCATTATAGGAACA+TGG - Chr4:87483294-87483313 MsG0480023600.01.T01:three_prime_UTR 40.0%
TTACTTGCATTAGATGCCCA+TGG - Chr4:87489434-87489453 MsG0480023600.01.T01:intron 40.0%
TTATGATCTAGGTTCTCCAG+CGG - Chr4:87491398-87491417 MsG0480023600.01.T01:intron 40.0%
TTCCTTTAACGTCGTGAAAC+AGG - Chr4:87485273-87485292 MsG0480023600.01.T01:intron 40.0%
TTCGGTTCAAAATTCAGAGC+CGG - Chr4:87488860-87488879 MsG0480023600.01.T01:intron 40.0%
TTCTGAGTCACTGGAAATCT+TGG - Chr4:87491030-87491049 MsG0480023600.01.T01:intron 40.0%
TTCTTATACTCAGCATGTGC+CGG + Chr4:87483885-87483904 None:intergenic 40.0%
TTTCACAGCACCAATGTCAT+CGG - Chr4:87487936-87487955 MsG0480023600.01.T01:intron 40.0%
TTTCTTTAAGTCGTCCCGTA+AGG - Chr4:87483663-87483682 MsG0480023600.01.T01:three_prime_UTR 40.0%
TTTGATGCTTCTGATGGGAA+GGG - Chr4:87490945-87490964 MsG0480023600.01.T01:intron 40.0%
! AATATTGTTCTGGCTGGAGT+TGG - Chr4:87486133-87486152 MsG0480023600.01.T01:intron 40.0%
! ACTGAACTGAACTGGATTAG+CGG - Chr4:87487609-87487628 MsG0480023600.01.T01:intron 40.0%
! AGCTGTCGATTGTAGTTTGT+TGG - Chr4:87488962-87488981 MsG0480023600.01.T01:CDS 40.0%
! AGCTTTCCGGCATTTTTCAT+TGG + Chr4:87486638-87486657 None:intergenic 40.0%
! AGGTGAAAGCAAGGTATTCA+CGG - Chr4:87490178-87490197 MsG0480023600.01.T01:intron 40.0%
! CAAAGCAATTTCTGGGAAAG+GGG - Chr4:87490899-87490918 MsG0480023600.01.T01:intron 40.0%
! CCATCGTCTCTCTATTTTCT+AGG - Chr4:87483636-87483655 MsG0480023600.01.T01:three_prime_UTR 40.0%
! CTTTTGTTCGTCTTGTCTTC+AGG - Chr4:87486437-87486456 MsG0480023600.01.T01:intron 40.0%
! GCAGTATCAATTGCTGTTCA+AGG - Chr4:87487970-87487989 MsG0480023600.01.T01:intron 40.0%
! GTCATCGACTATGATGATGA+AGG - Chr4:87488060-87488079 MsG0480023600.01.T01:intron 40.0%
! TCCTTTTCCTGTCATGTACT+AGG - Chr4:87489532-87489551 MsG0480023600.01.T01:CDS 40.0%
! TGAATTTCCATTGGTTGCAG+TGG - Chr4:87484298-87484317 MsG0480023600.01.T01:CDS 40.0%
! TTGGTTCTTCACCACTGTTA+TGG - Chr4:87488904-87488923 MsG0480023600.01.T01:CDS 40.0%
! TTTTGATGCTTCTGATGGGA+AGG - Chr4:87490944-87490963 MsG0480023600.01.T01:intron 40.0%
!! AACTTTTAGTTGACGGTGTC+TGG - Chr4:87490064-87490083 MsG0480023600.01.T01:intron 40.0%
!! ATATTGAGAGTCTTTGGGGT+TGG + Chr4:87489311-87489330 None:intergenic 40.0%
!! CTTCCATGTTTTTGCTACTC+TGG - Chr4:87486556-87486575 MsG0480023600.01.T01:intron 40.0%
!! GAACTGGATTAGTGGTTTGA+TGG - Chr4:87487508-87487527 MsG0480023600.01.T01:intron 40.0%
!! GAGCTGGAACTTTTAGTTGA+CGG - Chr4:87490057-87490076 MsG0480023600.01.T01:intron 40.0%
!! GTGGGTGGTCATTGATTTAT+TGG + Chr4:87488003-87488022 None:intergenic 40.0%
!! GTTATAACGGATGTCGTAAC+CGG + Chr4:87484727-87484746 None:intergenic 40.0%
!! TCTCTTTTGATTGTGGCTGT+GGG + Chr4:87484493-87484512 None:intergenic 40.0%
!! TGGTGCTGTGAAATTGTGAA+GGG + Chr4:87487929-87487948 None:intergenic 40.0%
!! TTATAACGGATGTCGTAACC+GGG + Chr4:87484726-87484745 None:intergenic 40.0%
!! TTCACGGGTTGCTTTAGTTT+TGG - Chr4:87490194-87490213 MsG0480023600.01.T01:intron 40.0%
!! TTGGTGCTGTGAAATTGTGA+AGG + Chr4:87487930-87487949 None:intergenic 40.0%
!! TTTTTGGACTGGGCATTTTC+TGG + Chr4:87485027-87485046 None:intergenic 40.0%
!!! AGTTGGGCAGTTTTTTTACC+AGG + Chr4:87487275-87487294 None:intergenic 40.0%
!!! CAGGATTTTTTCCCTCATAC+AGG - Chr4:87483320-87483339 MsG0480023600.01.T01:three_prime_UTR 40.0%
!!! TCCTCCATTTTTTTCTGCCA+AGG + Chr4:87489148-87489167 None:intergenic 40.0%
!!! TGGTTGGTCTCTTTTGATTG+TGG + Chr4:87484500-87484519 None:intergenic 40.0%
AAAGCAAGCACAGTATCCAC+AGG + Chr4:87489094-87489113 None:intergenic 45.0%
AACAACCACTTGATTAGGGG+TGG + Chr4:87488022-87488041 None:intergenic 45.0%
AACCTAGAGAACGCAAAGGT+TGG - Chr4:87487190-87487209 MsG0480023600.01.T01:intron 45.0%
AACTCAAACTCGTGGGATTG+TGG - Chr4:87483276-87483295 MsG0480023600.01.T01:three_prime_UTR 45.0%
AATGACTGGGTAAGCCATCA+AGG + Chr4:87489415-87489434 None:intergenic 45.0%
AATTAACCAGGTTTACCCGC+TGG + Chr4:87491505-87491524 None:intergenic 45.0%
ACAAATTAGATCCACAGGGG+TGG + Chr4:87486751-87486770 None:intergenic 45.0%
ACAACCACTTGATTAGGGGT+GGG + Chr4:87488021-87488040 None:intergenic 45.0%
ACCTAGACCTAGTACATGAC+AGG + Chr4:87489542-87489561 None:intergenic 45.0%
ACCTAGAGAACGCAAAGGTT+GGG - Chr4:87487191-87487210 MsG0480023600.01.T01:intron 45.0%
ACGGCGGTTTCCAAATAATC+CGG + Chr4:87488111-87488130 None:intergenic 45.0%
ACTTGCATTAGATGCCCATG+GGG - Chr4:87489436-87489455 MsG0480023600.01.T01:intron 45.0%
AGACGAAGCGAATTGTTTCC+AGG - Chr4:87483597-87483616 MsG0480023600.01.T01:three_prime_UTR 45.0%
AGCTCTATCAGTACCTTGGA+GGG - Chr4:87489922-87489941 MsG0480023600.01.T01:intron 45.0%
AGGTTGCGGTTGGAAATGAA+CGG - Chr4:87485293-87485312 MsG0480023600.01.T01:intron 45.0%
AGTTGTGAGAGAGAAGTTGC+CGG - Chr4:87488089-87488108 MsG0480023600.01.T01:intron 45.0%
ATAAGCAACCGACAGTCTAG+TGG + Chr4:87484520-87484539 None:intergenic 45.0%
ATCCAGTTCGGTTCAGTTTG+GGG + Chr4:87487497-87487516 None:intergenic 45.0%
ATCGCTGCAGGTTAAAGCAA+CGG - Chr4:87488530-87488549 MsG0480023600.01.T01:intron 45.0%
ATGAAGGGATTCCAGATGTG+AGG + Chr4:87488408-87488427 None:intergenic 45.0%
ATGACCGTCAGATTAGGGTT+TGG - Chr4:87485353-87485372 MsG0480023600.01.T01:intron 45.0%
CAAAGGTTGGGATGGATGAA+AGG - Chr4:87487203-87487222 MsG0480023600.01.T01:intron 45.0%
CCAATAACAGCAGAAACTGG+AGG + Chr4:87490774-87490793 None:intergenic 45.0%
CCAGTTTCTGCTGTTATTGG+GGG - Chr4:87490774-87490793 MsG0480023600.01.T01:intron 45.0%
CCTCCAGTTTCTGCTGTTAT+TGG - Chr4:87490771-87490790 MsG0480023600.01.T01:intron 45.0%
CTACACGTTTGGAAGCTTTC+CGG + Chr4:87486651-87486670 None:intergenic 45.0%
CTACAGCTCTATCAGTACCT+TGG - Chr4:87489918-87489937 MsG0480023600.01.T01:intron 45.0%
GAAAGCAATTCCTCAGTGAC+CGG + Chr4:87486184-87486203 None:intergenic 45.0%
GAAGGACCTTCTTTGAGCAT+CGG + Chr4:87485383-87485402 None:intergenic 45.0%
GACCGGTCTATCGTCAATTA+AGG + Chr4:87486167-87486186 None:intergenic 45.0%
GAGAAGTTTGAAGAGGCTGA+AGG - Chr4:87490528-87490547 MsG0480023600.01.T01:intron 45.0%
GAGCCGTGGTGTGAAAAATT+AGG - Chr4:87488733-87488752 MsG0480023600.01.T01:CDS 45.0%
GCATGATCTATAAACCGCTG+CGG + Chr4:87488374-87488393 None:intergenic 45.0%
GGACAGATGACATGGAATGA+TGG + Chr4:87483407-87483426 None:intergenic 45.0%
GGTGTGACTAACCTGTATGA+GGG + Chr4:87483334-87483353 None:intergenic 45.0%
GTAAGCTCTCTCTCTCCATT+AGG + Chr4:87490383-87490402 None:intergenic 45.0%
GTCATGTACATGTGTGGAAG+TGG + Chr4:87484681-87484700 None:intergenic 45.0%
GTCGTGGAATCTGAGAATGA+CGG + Chr4:87488296-87488315 None:intergenic 45.0%
GTCTTTCATTCTATCCGCAG+CGG - Chr4:87488357-87488376 MsG0480023600.01.T01:intron 45.0%
GTGGGATTGTGGACCATTAT+AGG - Chr4:87483287-87483306 MsG0480023600.01.T01:three_prime_UTR 45.0%
TAACGTCGTGAAACAGGTTG+CGG - Chr4:87485279-87485298 MsG0480023600.01.T01:intron 45.0%
TAAGAAGAGAGAGGAGAGCA+AGG - Chr4:87490133-87490152 MsG0480023600.01.T01:intron 45.0%
TACCCCAAACTGAACTGAAC+TGG - Chr4:87487601-87487620 MsG0480023600.01.T01:intron 45.0%
TATGATCTAGGTTCTCCAGC+GGG - Chr4:87491399-87491418 MsG0480023600.01.T01:intron 45.0%
TCAGAACCAATCGCTTGGTT+AGG - Chr4:87488463-87488482 MsG0480023600.01.T01:intron 45.0%
TCAGTTTAGGTGCCAAACAG+TGG + Chr4:87484613-87484632 None:intergenic 45.0%
TCATGTGCCTGATACTCTTC+TGG - Chr4:87490719-87490738 MsG0480023600.01.T01:intron 45.0%
TCCACAAAGACACGAACCAT+AGG + Chr4:87486295-87486314 None:intergenic 45.0%
TCCTATGGTTCGTGTCTTTG+TGG - Chr4:87486291-87486310 MsG0480023600.01.T01:intron 45.0%
TCCTGTCATGTACTAGGTCT+AGG - Chr4:87489538-87489557 MsG0480023600.01.T01:CDS 45.0%
TGACCGTCAGATTAGGGTTT+GGG - Chr4:87485354-87485373 MsG0480023600.01.T01:intron 45.0%
TGAGTTCCCCACTTGTAGAT+TGG - Chr4:87488596-87488615 MsG0480023600.01.T01:intron 45.0%
TGGGGTATAACTAACTGTCC+AGG + Chr4:87487479-87487498 None:intergenic 45.0%
TTCAAAAGACAGCTTGCCCT+TGG + Chr4:87491244-87491263 None:intergenic 45.0%
TTCAGAACAGAACCATCACG+AGG + Chr4:87491451-87491470 None:intergenic 45.0%
! AAAGGAGCTTTGTACTGCAC+AGG - Chr4:87490605-87490624 MsG0480023600.01.T01:intron 45.0%
! ACAGGTATGCTTGCTGGAAT+TGG - Chr4:87490623-87490642 MsG0480023600.01.T01:intron 45.0%
! ACTGAACCGAACTGGATTAG+TGG - Chr4:87487500-87487519 MsG0480023600.01.T01:intron 45.0%
! ATGGCGGCAATGATGATGAA+GGG + Chr4:87488423-87488442 None:intergenic 45.0%
! CTATGTTCTGGATTCTCCAG+CGG - Chr4:87491486-87491505 MsG0480023600.01.T01:intron 45.0%
! GGATTAGTGGTTTGATGGAG+CGG - Chr4:87487513-87487532 MsG0480023600.01.T01:intron 45.0%
! GGTGAAAGCAAGGTATTCAC+GGG - Chr4:87490179-87490198 MsG0480023600.01.T01:intron 45.0%
! GGTGCTGTGAAATTGTGAAG+GGG + Chr4:87487928-87487947 None:intergenic 45.0%
! TATGTTCTGGATTCTCCAGC+GGG - Chr4:87491487-87491506 MsG0480023600.01.T01:intron 45.0%
! TGGTGCACTGATAACCTTGA+TGG - Chr4:87489398-87489417 MsG0480023600.01.T01:intron 45.0%
! TTCCATTGGTTGCAGTGGAA+GGG - Chr4:87484303-87484322 MsG0480023600.01.T01:CDS 45.0%
! TTTCCATTGGTTGCAGTGGA+AGG - Chr4:87484302-87484321 MsG0480023600.01.T01:CDS 45.0%
!! GAACTGGATTAGCGGTTTGA+TGG - Chr4:87487617-87487636 MsG0480023600.01.T01:intron 45.0%
!! GCCCTTGGAGAATGTTTTGA+TGG + Chr4:87491229-87491248 None:intergenic 45.0%
!! GTCTCTTTTGATTGTGGCTG+TGG + Chr4:87484494-87484513 None:intergenic 45.0%
!! TATAACGGATGTCGTAACCG+GGG + Chr4:87484725-87484744 None:intergenic 45.0%
!! TTTATGGTAGTGGATAGGCC+TGG - Chr4:87487254-87487273 MsG0480023600.01.T01:intron 45.0%
!!! AGGCAAATAGTTTTGGCACC+AGG - Chr4:87484220-87484239 MsG0480023600.01.T01:intron 45.0%
!!! CAGTGCGTTTTGGTTCAGTT+GGG + Chr4:87487291-87487310 None:intergenic 45.0%
!!! GCAAATAGTTTTGGCACCAG+GGG - Chr4:87484222-87484241 MsG0480023600.01.T01:intron 45.0%
!!! GGCAAATAGTTTTGGCACCA+GGG - Chr4:87484221-87484240 MsG0480023600.01.T01:intron 45.0%
!!! TCAGTGCGTTTTGGTTCAGT+TGG + Chr4:87487292-87487311 None:intergenic 45.0%
!!! TGGTGGTTTTGAGAGTGAAG+CGG + Chr4:87487803-87487822 None:intergenic 45.0%
!!! TTTATTTTATTCAAAAAAAA+AGG - Chr4:87484443-87484462 MsG0480023600.01.T01:intron 5.0%
ACCAATCGCTTGGTTAGGTG+TGG - Chr4:87488468-87488487 MsG0480023600.01.T01:intron 50.0%
ACCACACCTAACCAAGCGAT+TGG + Chr4:87488472-87488491 None:intergenic 50.0%
AGAATGGTGATCATCGCTGC+AGG - Chr4:87488518-87488537 MsG0480023600.01.T01:intron 50.0%
AGAGAACGCAAAGGTTGGGA+TGG - Chr4:87487195-87487214 MsG0480023600.01.T01:intron 50.0%
AGTAATGTTGGGGGTTGCCA+TGG + Chr4:87484248-87484267 None:intergenic 50.0%
ATCATCATTGCCGCCATCGA+TGG - Chr4:87488426-87488445 MsG0480023600.01.T01:intron 50.0%
ATTCAAGACCCGCCACTGTT+TGG - Chr4:87484598-87484617 MsG0480023600.01.T01:intron 50.0%
CAATGACGAAGAGCCATCGA+TGG + Chr4:87488442-87488461 None:intergenic 50.0%
CACCCCAAACCCTAATCTGA+CGG + Chr4:87485360-87485379 None:intergenic 50.0%
CAGCTCTATCAGTACCTTGG+AGG - Chr4:87489921-87489940 MsG0480023600.01.T01:intron 50.0%
CAGGAACCTAGAGAACGCAA+AGG - Chr4:87487186-87487205 MsG0480023600.01.T01:intron 50.0%
CCCCCAATAACAGCAGAAAC+TGG + Chr4:87490777-87490796 None:intergenic 50.0%
GACCGTCAGATTAGGGTTTG+GGG - Chr4:87485355-87485374 MsG0480023600.01.T01:intron 50.0%
GAGACCAACCACTAGACTGT+CGG - Chr4:87484509-87484528 MsG0480023600.01.T01:intron 50.0%
GGAAACCGCCGTAGATAGAA+TGG - Chr4:87488119-87488138 MsG0480023600.01.T01:intron 50.0%
GGCGGCGTTAAAAAAAACGG+TGG - Chr4:87488551-87488570 MsG0480023600.01.T01:intron 50.0%
GGGTGTGACTAACCTGTATG+AGG + Chr4:87483335-87483354 None:intergenic 50.0%
GGTTGAAGCTCCGATGACAT+TGG + Chr4:87487949-87487968 None:intergenic 50.0%
GTTTAGGTGCCAAACAGTGG+CGG + Chr4:87484610-87484629 None:intergenic 50.0%
TACCCCAAACTGAACCGAAC+TGG - Chr4:87487492-87487511 MsG0480023600.01.T01:intron 50.0%
TACTGCACAGGTATGCTTGC+TGG - Chr4:87490617-87490636 MsG0480023600.01.T01:intron 50.0%
TCAAAGACAGGTTTACCCGC+TGG + Chr4:87491417-87491436 None:intergenic 50.0%
TCAAAGACAGGTTTACCGGC+TGG + Chr4:87491330-87491349 None:intergenic 50.0%
TCCCAACCTTTGCGTTCTCT+AGG + Chr4:87487195-87487214 None:intergenic 50.0%
TGAAAATTCGTCTCAGGGCG+CGG + Chr4:87485125-87485144 None:intergenic 50.0%
TTCGGGACAGAACCATCATG+AGG + Chr4:87491276-87491295 None:intergenic 50.0%
TTTAGGTGCCAAACAGTGGC+GGG + Chr4:87484609-87484628 None:intergenic 50.0%
! GATGGCGGCAATGATGATGA+AGG + Chr4:87488424-87488443 None:intergenic 50.0%
! GGATTAGCGGTTTGATGGAG+CGG - Chr4:87487622-87487641 MsG0480023600.01.T01:intron 50.0%
! TATGTTCTGGGTTCTCCAGC+CGG - Chr4:87491312-87491331 MsG0480023600.01.T01:CDS 50.0%
! TCCATTGGTTGCAGTGGAAG+GGG - Chr4:87484304-87484323 MsG0480023600.01.T01:CDS 50.0%
!! ATCAAAAGGTACCACCCCTG+TGG - Chr4:87486737-87486756 MsG0480023600.01.T01:intron 50.0%
ACCACCCACCCCTAATCAAG+TGG - Chr4:87488014-87488033 MsG0480023600.01.T01:intron 55.0%
ACCACTTGATTAGGGGTGGG+TGG + Chr4:87488018-87488037 None:intergenic 55.0%
ACCCCTTCCACTGCAACCAA+TGG + Chr4:87484308-87484327 None:intergenic 55.0%
AGAGGCTGAAGGACGTAGTG+CGG - Chr4:87490539-87490558 MsG0480023600.01.T01:intron 55.0%
CGGTGACTGTGACTGGAATG+AGG + Chr4:87485086-87485105 None:intergenic 55.0%
CGGTTGGAAATGAACGGCGA+CGG - Chr4:87485299-87485318 MsG0480023600.01.T01:intron 55.0%
GAACTGTCGGTGACTGTGAC+TGG + Chr4:87485093-87485112 None:intergenic 55.0%
GATTCTCCAGCGGGTAAACC+TGG - Chr4:87491496-87491515 MsG0480023600.01.T01:intron 55.0%
GCAACCGACAGTCTAGTGGT+TGG + Chr4:87484516-87484535 None:intergenic 55.0%
GCTGCAGGTTAAAGCAACGG+CGG - Chr4:87488533-87488552 MsG0480023600.01.T01:intron 55.0%
GGTTCTGTCCCGAAAGAAGC+TGG - Chr4:87491282-87491301 MsG0480023600.01.T01:CDS 55.0%
GTCGTGAAACAGGTTGCGGT+TGG - Chr4:87485283-87485302 MsG0480023600.01.T01:intron 55.0%
TACCTTGGAGGGCTCTTCAC+AGG - Chr4:87489933-87489952 MsG0480023600.01.T01:intron 55.0%
TGACGAAGAGCCATCGATGG+CGG + Chr4:87488439-87488458 None:intergenic 55.0%
TGACGATAGACCGGTCACTG+AGG - Chr4:87486171-87486190 MsG0480023600.01.T01:intron 55.0%
TTGATTGTGGCTGTGGGAGC+TGG + Chr4:87484487-87484506 None:intergenic 55.0%
!! GCTGTTATTGGGGGCATCCT+TGG - Chr4:87490783-87490802 MsG0480023600.01.T01:intron 55.0%
!! TATTGGGGGCATCCTTGGAC+AGG - Chr4:87490788-87490807 MsG0480023600.01.T01:intron 55.0%
!!! GTGGTTTTGAGAGTGAGCCG+TGG - Chr4:87488719-87488738 MsG0480023600.01.T01:CDS 55.0%
AAATTCGTCTCAGGGCGCGG+AGG + Chr4:87485122-87485141 None:intergenic 60.0%
ACGGCGACGGCGAAGAGTTA+CGG - Chr4:87485312-87485331 MsG0480023600.01.T01:intron 60.0%
CTCCTGTGAAGAGCCCTCCA+AGG + Chr4:87489938-87489957 None:intergenic 60.0%
GAAGTAGGGGGTTCGAACCC+CGG - Chr4:87484705-87484724 MsG0480023600.01.T01:intron 60.0%
GAGGCTGAAGGACGTAGTGC+GGG - Chr4:87490540-87490559 MsG0480023600.01.T01:intron 60.0%
GCGGAGGAGAAGGGAACTGT+CGG + Chr4:87485106-87485125 None:intergenic 60.0%
!! AGTTTTGGCACCAGGGGCCA+TGG - Chr4:87484228-87484247 MsG0480023600.01.T01:intron 60.0%
!! GAGCTGGTTCGATTCCCCAC+AGG + Chr4:87484471-87484490 None:intergenic 60.0%
!! GGGGTGCCGATGCTCAAAGA+AGG - Chr4:87485374-87485393 MsG0480023600.01.T01:intron 60.0%
ACGGCGAAGAGTTACGGCGC+AGG - Chr4:87485318-87485337 MsG0480023600.01.T01:intron 65.0%
TCTCAGGGCGCGGAGGAGAA+GGG + Chr4:87485115-87485134 None:intergenic 65.0%
GTCTCAGGGCGCGGAGGAGA+AGG + Chr4:87485116-87485135 None:intergenic 70.0%
TTGGGGGTTGCCATGGCCCC+TGG + Chr4:87484241-87484260 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 87483260 87491640 87483260 ID=MsG0480023600.01;Name=MsG0480023600.01
Chr4 mRNA 87483260 87491640 87483260 ID=MsG0480023600.01.T01;Parent=MsG0480023600.01;Name=MsG0480023600.01.T01;_AED=0.49;_eAED=0.58;_QI=0|0.33|0.5|1|1|1|10|633|345
Chr4 exon 87483260 87484009 87483260 ID=MsG0480023600.01.T01:exon:6593;Parent=MsG0480023600.01.T01
Chr4 exon 87484091 87484195 87484091 ID=MsG0480023600.01.T01:exon:6592;Parent=MsG0480023600.01.T01
Chr4 exon 87484274 87484377 87484274 ID=MsG0480023600.01.T01:exon:6591;Parent=MsG0480023600.01.T01
Chr4 exon 87488197 87488272 87488197 ID=MsG0480023600.01.T01:exon:6590;Parent=MsG0480023600.01.T01
Chr4 exon 87488603 87488776 87488603 ID=MsG0480023600.01.T01:exon:6589;Parent=MsG0480023600.01.T01
Chr4 exon 87488896 87489000 87488896 ID=MsG0480023600.01.T01:exon:6588;Parent=MsG0480023600.01.T01
Chr4 exon 87489271 87489322 87489271 ID=MsG0480023600.01.T01:exon:6587;Parent=MsG0480023600.01.T01
Chr4 exon 87489505 87489605 87489505 ID=MsG0480023600.01.T01:exon:6586;Parent=MsG0480023600.01.T01
Chr4 exon 87491221 87491342 87491221 ID=MsG0480023600.01.T01:exon:6585;Parent=MsG0480023600.01.T01
Chr4 exon 87491559 87491640 87491559 ID=MsG0480023600.01.T01:exon:6584;Parent=MsG0480023600.01.T01
Chr4 CDS 87491559 87491640 87491559 ID=MsG0480023600.01.T01:cds;Parent=MsG0480023600.01.T01
Chr4 CDS 87491221 87491342 87491221 ID=MsG0480023600.01.T01:cds;Parent=MsG0480023600.01.T01
Chr4 CDS 87489505 87489605 87489505 ID=MsG0480023600.01.T01:cds;Parent=MsG0480023600.01.T01
Chr4 CDS 87489271 87489322 87489271 ID=MsG0480023600.01.T01:cds;Parent=MsG0480023600.01.T01
Chr4 CDS 87488896 87489000 87488896 ID=MsG0480023600.01.T01:cds;Parent=MsG0480023600.01.T01
Chr4 CDS 87488603 87488776 87488603 ID=MsG0480023600.01.T01:cds;Parent=MsG0480023600.01.T01
Chr4 CDS 87488197 87488272 87488197 ID=MsG0480023600.01.T01:cds;Parent=MsG0480023600.01.T01
Chr4 CDS 87484274 87484377 87484274 ID=MsG0480023600.01.T01:cds;Parent=MsG0480023600.01.T01
Chr4 CDS 87484091 87484195 87484091 ID=MsG0480023600.01.T01:cds;Parent=MsG0480023600.01.T01
Chr4 CDS 87483893 87484009 87483893 ID=MsG0480023600.01.T01:cds;Parent=MsG0480023600.01.T01
Chr4 three_prime_UTR 87483260 87483892 87483260 ID=MsG0480023600.01.T01:three_prime_utr;Parent=MsG0480023600.01.T01
Gene Sequence

>MsG0480023600.01.T01

ATGCTTTGTGATACGAAACTCAAACTCGTGGGATTGTGGACCATTATAGGAACATGGAATCAGGATTTTTTCCCTCATACAGGGTTAAAATCGATATTACGATGTGATGCTGAGGATTCAAAGACGAAGCGAATTGTTTCCAGGAACAGAAAAATTGTAACCATCGTCTCTCTATTTTCTAGGCAAGTTTCTTTAAGTCGTCCCGTTGCGGTTGGAAATGAACGGCGACGGCGAAGAGTTACGGCGCAGGAAACCGCTTTGTATGACCGTCAGATTAGGGTTTGGGGTGCCGATGCTCAAAGAAGATTAAGCAAAGCTCATGTCTTAGTTTATGGAATGAAAGGAACTATTGCTGAGCTTGTGAAAAACAAGTTATCTTGGAGAGTGTATGAAAATAAGCTGAAAACAACTCGTGAACATGTCGTAAGCAGTTTTCTTAAGTTCTCCGAAATTATCTTACAGTTTTGCAAGAATATTGTTCTGGCTGGAGTTGGTAGTCTGACCTTAATTGACGATAGACCGGTCACTGAGGAATTGCTTTCTTCAAATTTTCTTATTCCTCCTGATGAGAATGTGTATAATGGAAAAACCATTGCTCAGCTTTGTTGTGATTCACTTAAAGACTTCAATCCTATGAAACTAGCCAATGAAAAATGCCGGAAAGCTTCCAAACGTGTAGCATTTTATACTGTTGACTGTAGAGATTCTTGCGTAATAGAGAAGTTTGAAGAGGCTGAAGGACGTAGTGCGGGAGATGTTTCTGATGCAGATCTTTCCAATGTTCTTAAGCTGAAAAAGGAGCTTTGTACTGCACAGTCTCTCAATGAATCTCATGTGCCTGATACTCTTCTGGAAAGATTGGTAGCAGATACAACAGAATTTCCTCCAGTTTCTGCTGTTATTGGGGGCATCCTTGGACAGGAGGTTATCAAAGCAATTTCTGGGAAAGGGGATCCCATAAAAAACTTTTTCTATTTTGATGCTTCTGATGGGAAGGGTATCATAGAAGACATATCTGATTCAAATACTGGAAAGTGA

Protein sequence

>MsG0480023600.01.T01

MLCDTKLKLVGLWTIIGTWNQDFFPHTGLKSILRCDAEDSKTKRIVSRNRKIVTIVSLFSRQVSLSRPVAVGNERRRRRVTAQETALYDRQIRVWGADAQRRLSKAHVLVYGMKGTIAELVKNKLSWRVYENKLKTTREHVVSSFLKFSEIILQFCKNIVLAGVGSLTLIDDRPVTEELLSSNFLIPPDENVYNGKTIAQLCCDSLKDFNPMKLANEKCRKASKRVAFYTVDCRDSCVIEKFEEAEGRSAGDVSDADLSNVLKLKKELCTAQSLNESHVPDTLLERLVADTTEFPPVSAVIGGILGQEVIKAISGKGDPIKNFFYFDASDGKGIIEDISDSNTGK*