Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022916.01.T01 | XP_013446508.1 | 100 | 69 | 0 | 0 | 28 | 96 | 186 | 254 | 3.76E-41 | 145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022916.01.T01 | Q9M022 | 50.943 | 53 | 26 | 0 | 28 | 80 | 174 | 226 | 2.51E-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022916.01.T01 | A0A072U3W9 | 100.000 | 69 | 0 | 0 | 28 | 96 | 186 | 254 | 1.79e-41 | 145 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048815.01 | MsG0480022916.01 | 0.810617 | 1.054256e-50 | 6.385456e-48 |
| MsG0080048982.01 | MsG0480022916.01 | 0.801440 | 8.994122e-49 | 4.295503e-46 |
| MsG0080049150.01 | MsG0480022916.01 | 0.801605 | 8.320321e-49 | 3.990115e-46 |
| MsG0180000114.01 | MsG0480022916.01 | 0.856150 | 3.908600e-62 | 9.239645e-59 |
| MsG0180000176.01 | MsG0480022916.01 | 0.810810 | 9.580816e-51 | 5.832775e-48 |
| MsG0180000777.01 | MsG0480022916.01 | 0.835932 | 1.258241e-56 | 1.561574e-53 |
| MsG0180000814.01 | MsG0480022916.01 | 0.834913 | 2.276882e-56 | 2.740787e-53 |
| MsG0180000982.01 | MsG0480022916.01 | 0.801989 | 6.938702e-49 | 3.360199e-46 |
| MsG0180001100.01 | MsG0480022916.01 | 0.809479 | 1.854573e-50 | 1.090037e-47 |
| MsG0180001381.01 | MsG0480022916.01 | 0.801535 | 8.600431e-49 | 4.117376e-46 |
| MsG0180001886.01 | MsG0480022916.01 | 0.823236 | 1.544125e-53 | 1.321963e-50 |
| MsG0180002664.01 | MsG0480022916.01 | 0.804249 | 2.365659e-49 | 1.213754e-46 |
| MsG0180002709.01 | MsG0480022916.01 | 0.819896 | 9.126686e-53 | 7.113843e-50 |
| MsG0180002796.01 | MsG0480022916.01 | 0.811712 | 6.102384e-51 | 3.804710e-48 |
| MsG0180002955.01 | MsG0480022916.01 | 0.820741 | 5.842769e-53 | 4.661978e-50 |
| MsG0180003357.01 | MsG0480022916.01 | 0.841444 | 4.733209e-58 | 6.956925e-55 |
| MsG0180003510.01 | MsG0480022916.01 | 0.816040 | 6.787639e-52 | 4.757736e-49 |
| MsG0180003673.01 | MsG0480022916.01 | 0.805940 | 1.047053e-49 | 5.611582e-47 |
| MsG0180003725.01 | MsG0480022916.01 | 0.839510 | 1.517812e-57 | 2.100715e-54 |
| MsG0180003807.01 | MsG0480022916.01 | 0.801168 | 1.022472e-48 | 4.849878e-46 |
| MsG0180003810.01 | MsG0480022916.01 | 0.808624 | 2.826110e-50 | 1.623684e-47 |
| MsG0180004252.01 | MsG0480022916.01 | 0.806264 | 8.950475e-50 | 4.836763e-47 |
| MsG0180004725.01 | MsG0480022916.01 | 0.828976 | 6.663753e-55 | 6.727418e-52 |
| MsG0180004996.01 | MsG0480022916.01 | 0.831317 | 1.787544e-55 | 1.932807e-52 |
| MsG0180005160.01 | MsG0480022916.01 | 0.809887 | 1.514812e-50 | 9.000144e-48 |
| MsG0180005354.01 | MsG0480022916.01 | 0.814005 | 1.920430e-51 | 1.273541e-48 |
| MsG0180005397.01 | MsG0480022916.01 | 0.848049 | 7.850103e-60 | 1.422445e-56 |
| MsG0180005398.01 | MsG0480022916.01 | 0.861421 | 1.037995e-63 | 2.935774e-60 |
| MsG0180005445.01 | MsG0480022916.01 | 0.800144 | 1.654029e-48 | 7.644360e-46 |
| MsG0180005509.01 | MsG0480022916.01 | 0.805706 | 1.172840e-49 | 6.248282e-47 |
| MsG0180005786.01 | MsG0480022916.01 | 0.815524 | 8.847988e-52 | 6.114708e-49 |
| MsG0180005787.01 | MsG0480022916.01 | 0.804205 | 2.415777e-49 | 1.238097e-46 |
| MsG0180005799.01 | MsG0480022916.01 | 0.805159 | 1.526808e-49 | 8.020052e-47 |
| MsG0180005960.01 | MsG0480022916.01 | 0.801663 | 8.095753e-49 | 3.888167e-46 |
| MsG0180005990.01 | MsG0480022916.01 | 0.813704 | 2.237035e-51 | 1.471488e-48 |
| MsG0180006046.01 | MsG0480022916.01 | 0.800662 | 1.297393e-48 | 6.075502e-46 |
| MsG0180006050.01 | MsG0480022916.01 | 0.830914 | 2.245174e-55 | 2.398990e-52 |
| MsG0180006138.01 | MsG0480022916.01 | 0.810418 | 1.164076e-50 | 7.012978e-48 |
| MsG0280006309.01 | MsG0480022916.01 | 0.800845 | 1.190701e-48 | 5.601835e-46 |
| MsG0280006440.01 | MsG0480022916.01 | 0.818133 | 2.297739e-52 | 1.705517e-49 |
| MsG0280010599.01 | MsG0480022916.01 | 0.818339 | 2.064058e-52 | 1.540893e-49 |
| MsG0280010702.01 | MsG0480022916.01 | 0.825364 | 4.881209e-54 | 4.439548e-51 |
| MsG0280010901.01 | MsG0480022916.01 | 0.805146 | 1.537037e-49 | 8.070974e-47 |
| MsG0280010976.01 | MsG0480022916.01 | 0.834295 | 3.256345e-56 | 3.848011e-53 |
| MsG0280011052.01 | MsG0480022916.01 | 0.800392 | 1.472314e-48 | 6.847647e-46 |
| MsG0280011410.01 | MsG0480022916.01 | 0.815314 | 9.848128e-52 | 6.766714e-49 |
| MsG0380011531.01 | MsG0480022916.01 | 0.817791 | 2.746010e-52 | 2.019251e-49 |
| MsG0380011669.01 | MsG0480022916.01 | 0.842332 | 2.758182e-58 | 4.168214e-55 |
| MsG0380011729.01 | MsG0480022916.01 | 0.802141 | 6.459562e-49 | 3.140261e-46 |
| MsG0380013145.01 | MsG0480022916.01 | 0.803984 | 2.684737e-49 | 1.368298e-46 |
| MsG0380014248.01 | MsG0480022916.01 | 0.814333 | 1.624892e-51 | 1.087215e-48 |
| MsG0380014296.01 | MsG0480022916.01 | 0.814730 | 1.327525e-51 | 8.978110e-49 |
| MsG0380014866.01 | MsG0480022916.01 | 0.837962 | 3.813462e-57 | 5.034355e-54 |
| MsG0480018473.01 | MsG0480022916.01 | 0.825653 | 4.168625e-54 | 3.823049e-51 |
| MsG0480018479.01 | MsG0480022916.01 | 0.834505 | 2.883149e-56 | 3.428634e-53 |
| MsG0480018847.01 | MsG0480022916.01 | 0.849601 | 2.912012e-60 | 5.549413e-57 |
| MsG0480018995.01 | MsG0480022916.01 | 0.801476 | 8.842036e-49 | 4.226773e-46 |
| MsG0480019434.01 | MsG0480022916.01 | 0.812564 | 3.979338e-51 | 2.538554e-48 |
| MsG0480021041.01 | MsG0480022916.01 | 0.801845 | 7.430763e-49 | 3.585440e-46 |
| MsG0480021240.01 | MsG0480022916.01 | 0.808749 | 2.657950e-50 | 1.532100e-47 |
| MsG0480021805.01 | MsG0480022916.01 | 0.800079 | 1.705562e-48 | 7.869441e-46 |
| MsG0480021917.01 | MsG0480022916.01 | 0.826435 | 2.717605e-54 | 2.548438e-51 |
| MsG0480021959.01 | MsG0480022916.01 | 0.807583 | 4.709602e-50 | 2.632874e-47 |
| MsG0480021998.01 | MsG0480022916.01 | 0.813051 | 3.112813e-51 | 2.011460e-48 |
| MsG0480022178.01 | MsG0480022916.01 | 0.828146 | 1.057344e-54 | 1.042078e-51 |
| MsG0480022207.01 | MsG0480022916.01 | 0.813443 | 2.552771e-51 | 1.667389e-48 |
| MsG0480022672.01 | MsG0480022916.01 | 0.801127 | 1.042683e-48 | 4.940679e-46 |
| MsG0480022786.01 | MsG0480022916.01 | 0.805099 | 1.571941e-49 | 8.244255e-47 |
| MsG0480022916.01 | MsG0480023025.01 | 0.820695 | 5.987932e-53 | 4.771593e-50 |
| MsG0480022916.01 | MsG0480023248.01 | 0.807341 | 5.300092e-50 | 2.944634e-47 |
| MsG0480022916.01 | MsG0480023356.01 | 0.801168 | 1.022472e-48 | 4.849878e-46 |
| MsG0480022916.01 | MsG0480023638.01 | 0.816099 | 6.584128e-52 | 4.622589e-49 |
| MsG0480022916.01 | MsG0480023943.01 | 0.800025 | 1.748934e-48 | 8.058482e-46 |
| MsG0480022916.01 | MsG0480023994.01 | 0.834269 | 3.304064e-56 | 3.901335e-53 |
| MsG0480022916.01 | MsG0480024014.01 | 0.814058 | 1.869518e-51 | 1.241549e-48 |
| MsG0480022916.01 | MsG0580024160.01 | 0.817050 | 4.031537e-52 | 2.905032e-49 |
| MsG0480022916.01 | MsG0580024288.01 | -0.839734 | 1.327143e-57 | 1.849351e-54 |
| MsG0480022916.01 | MsG0580024727.01 | 0.824156 | 9.403089e-54 | 8.262155e-51 |
| MsG0480022916.01 | MsG0580024829.01 | 0.837732 | 4.369147e-57 | 5.727725e-54 |
| MsG0480022916.01 | MsG0580025009.01 | 0.800419 | 1.454176e-48 | 6.767976e-46 |
| MsG0480022916.01 | MsG0580025866.01 | 0.818366 | 2.034993e-52 | 1.520344e-49 |
| MsG0480022916.01 | MsG0580026086.01 | 0.812578 | 3.952005e-51 | 2.522014e-48 |
| MsG0480022916.01 | MsG0580026225.01 | 0.831738 | 1.407952e-55 | 1.541733e-52 |
| MsG0480022916.01 | MsG0580026340.01 | 0.812000 | 5.282397e-51 | 3.319071e-48 |
| MsG0480022916.01 | MsG0580027449.01 | 0.816658 | 4.935953e-52 | 3.518754e-49 |
| MsG0480022916.01 | MsG0580028918.01 | 0.824119 | 9.590631e-54 | 8.417932e-51 |
| MsG0480022916.01 | MsG0580029514.01 | -0.831700 | 1.438699e-55 | 1.573541e-52 |
| MsG0480022916.01 | MsG0580029647.01 | 0.820018 | 8.561862e-53 | 6.696529e-50 |
| MsG0480022916.01 | MsG0680030413.01 | 0.829189 | 5.917353e-55 | 6.012602e-52 |
| MsG0480022916.01 | MsG0680030415.01 | 0.806885 | 6.619214e-50 | 3.634223e-47 |
| MsG0480022916.01 | MsG0680031334.01 | 0.810971 | 8.838508e-51 | 5.404658e-48 |
| MsG0480022916.01 | MsG0680031377.01 | -0.836499 | 9.031339e-57 | 1.140167e-53 |
| MsG0480022916.01 | MsG0680031468.01 | 0.834064 | 3.719466e-56 | 4.364621e-53 |
| MsG0480022916.01 | MsG0680031815.01 | 0.828545 | 8.472967e-55 | 8.448034e-52 |
| MsG0480022916.01 | MsG0680034037.01 | 0.819592 | 1.070981e-52 | 8.277174e-50 |
| MsG0480022916.01 | MsG0680034235.01 | 0.848116 | 7.524056e-60 | 1.366242e-56 |
| MsG0480022916.01 | MsG0680035340.01 | 0.801482 | 8.819472e-49 | 4.216565e-46 |
| MsG0480022916.01 | MsG0680035476.01 | 0.802050 | 6.744177e-49 | 3.271094e-46 |
| MsG0480022916.01 | MsG0780035958.01 | 0.802559 | 5.296543e-49 | 2.602438e-46 |
| MsG0480022916.01 | MsG0780036117.01 | 0.848722 | 5.113998e-60 | 9.472710e-57 |
| MsG0480022916.01 | MsG0780036128.01 | 0.808778 | 2.620320e-50 | 1.511521e-47 |
| MsG0480022916.01 | MsG0780036183.01 | 0.814899 | 1.217970e-51 | 8.274309e-49 |
| MsG0480022916.01 | MsG0780036800.01 | 0.804828 | 1.790921e-49 | 9.327999e-47 |
| MsG0480022916.01 | MsG0780036845.01 | 0.831844 | 1.326024e-55 | 1.456552e-52 |
| MsG0480022916.01 | MsG0780037124.01 | 0.807732 | 4.378089e-50 | 2.457280e-47 |
| MsG0480022916.01 | MsG0780037141.01 | 0.833538 | 5.035679e-56 | 5.816735e-53 |
| MsG0480022916.01 | MsG0780037330.01 | 0.820832 | 5.570182e-53 | 4.456011e-50 |
| MsG0480022916.01 | MsG0780037399.01 | 0.804312 | 2.295085e-49 | 1.179508e-46 |
| MsG0480022916.01 | MsG0780038092.01 | 0.817828 | 2.692609e-52 | 1.982019e-49 |
| MsG0480022916.01 | MsG0780038491.01 | 0.806599 | 7.607934e-50 | 4.146294e-47 |
| MsG0480022916.01 | MsG0780038636.01 | 0.814499 | 1.493480e-51 | 1.003835e-48 |
| MsG0480022916.01 | MsG0780039143.01 | 0.828650 | 7.991041e-55 | 7.991975e-52 |
| MsG0480022916.01 | MsG0780039439.01 | 0.816294 | 5.954770e-52 | 4.203153e-49 |
| MsG0480022916.01 | MsG0780039442.01 | 0.824136 | 9.506108e-54 | 8.347818e-51 |
| MsG0480022916.01 | MsG0780040176.01 | 0.806362 | 8.533855e-50 | 4.622896e-47 |
| MsG0480022916.01 | MsG0780040254.01 | 0.809729 | 1.638649e-50 | 9.696121e-48 |
| MsG0480022916.01 | MsG0780040424.01 | 0.800352 | 1.500416e-48 | 6.971265e-46 |
| MsG0480022916.01 | MsG0780040742.01 | 0.815753 | 7.866554e-52 | 5.470902e-49 |
| MsG0480022916.01 | MsG0780040758.01 | 0.802366 | 5.804961e-49 | 2.838471e-46 |
| MsG0480022916.01 | MsG0780041187.01 | 0.831179 | 1.933371e-55 | 2.081833e-52 |
| MsG0480022916.01 | MsG0780041210.01 | 0.809894 | 1.510093e-50 | 8.973492e-48 |
| MsG0480022916.01 | MsG0780041387.01 | 0.817972 | 2.498879e-52 | 1.846543e-49 |
| MsG0480022916.01 | MsG0780041432.01 | 0.827838 | 1.254320e-54 | 1.225034e-51 |
| MsG0480022916.01 | MsG0780041498.01 | 0.816595 | 5.098980e-52 | 3.628577e-49 |
| MsG0480022916.01 | MsG0880042324.01 | 0.805613 | 1.226763e-49 | 6.519434e-47 |
| MsG0480022916.01 | MsG0880042622.01 | 0.813721 | 2.217494e-51 | 1.459318e-48 |
| MsG0480022916.01 | MsG0880042743.01 | 0.847238 | 1.312292e-59 | 2.317582e-56 |
| MsG0480022916.01 | MsG0880042857.01 | 0.830965 | 2.182178e-55 | 2.335014e-52 |
| MsG0480022916.01 | MsG0880043162.01 | 0.819054 | 1.420604e-52 | 1.081637e-49 |
| MsG0480022916.01 | MsG0880043341.01 | 0.821695 | 3.522042e-53 | 2.886208e-50 |
| MsG0480022916.01 | MsG0880043532.01 | 0.803340 | 3.653562e-49 | 1.831290e-46 |
| MsG0480022916.01 | MsG0880043625.01 | 0.833470 | 5.234791e-56 | 6.034274e-53 |
| MsG0480022916.01 | MsG0880043804.01 | 0.829430 | 5.169256e-55 | 5.289478e-52 |
| MsG0480022916.01 | MsG0880043867.01 | 0.801332 | 9.465729e-49 | 4.508380e-46 |
| MsG0480022916.01 | MsG0880044145.01 | 0.803764 | 2.983311e-49 | 1.511800e-46 |
| MsG0480022916.01 | MsG0880044975.01 | 0.807783 | 4.270283e-50 | 2.399910e-47 |
| MsG0480022916.01 | MsG0880045387.01 | 0.813765 | 2.168402e-51 | 1.428632e-48 |
| MsG0480022916.01 | MsG0880045613.01 | 0.809483 | 1.850576e-50 | 1.087803e-47 |
| MsG0480022916.01 | MsG0880045765.01 | 0.804024 | 2.634136e-49 | 1.343846e-46 |
| MsG0480022916.01 | MsG0880046047.01 | 0.804654 | 1.946891e-49 | 1.009432e-46 |
| MsG0480022916.01 | MsG0880046517.01 | 0.810211 | 1.290141e-50 | 7.730072e-48 |
| MsG0480022916.01 | MsG0880046790.01 | 0.818003 | 2.458272e-52 | 1.818211e-49 |
| MsG0480022916.01 | MsG0880046901.01 | 0.808774 | 2.625667e-50 | 1.514440e-47 |
| MsG0480022916.01 | MsG0880047045.01 | 0.812009 | 5.258504e-51 | 3.304868e-48 |
| MsG0480022916.01 | MsG0880047046.01 | 0.832615 | 8.545272e-56 | 9.601849e-53 |
| MsG0480022916.01 | MsG0880047152.01 | 0.816668 | 4.910351e-52 | 3.501392e-49 |
| MsG0480022916.01 | MsG0880047267.01 | 0.814997 | 1.158364e-51 | 7.890740e-49 |
| MsG0480022916.01 | MsG0880047391.01 | 0.800070 | 1.712346e-48 | 7.899127e-46 |
| MsG0480022916.01 | MsG0880047594.01 | 0.821219 | 4.536093e-53 | 3.668170e-50 |
| MsG0480022916.01 | MsG0880047745.01 | 0.817137 | 3.854252e-52 | 2.783826e-49 |
| MsG0380015607.01 | MsG0480022916.01 | 0.806997 | 6.267575e-50 | 3.451094e-47 |
| MsG0380015930.01 | MsG0480022916.01 | 0.802409 | 5.688246e-49 | 2.784399e-46 |
| MsG0380016133.01 | MsG0480022916.01 | 0.844172 | 8.909873e-59 | 1.426534e-55 |
| MsG0380016187.01 | MsG0480022916.01 | 0.829080 | 6.286226e-55 | 6.366175e-52 |
| MsG0380016923.01 | MsG0480022916.01 | 0.826415 | 2.747315e-54 | 2.574920e-51 |
| MsG0380017048.01 | MsG0480022916.01 | 0.810002 | 1.431155e-50 | 8.529206e-48 |
| MsG0380017229.01 | MsG0480022916.01 | 0.805065 | 1.598093e-49 | 8.374173e-47 |
| MsG0380017401.01 | MsG0480022916.01 | 0.847482 | 1.124459e-59 | 2.001487e-56 |
| MsG0380017512.01 | MsG0480022916.01 | 0.810040 | 1.404589e-50 | 8.379117e-48 |
| MsG0380017528.01 | MsG0480022916.01 | 0.800047 | 1.730681e-48 | 7.978925e-46 |
| MsG0380017543.01 | MsG0480022916.01 | 0.817015 | 4.105756e-52 | 2.955728e-49 |
| MsG0380018044.01 | MsG0480022916.01 | 0.800192 | 1.617205e-48 | 7.483149e-46 |
| MsG0480018318.01 | MsG0480022916.01 | 0.804680 | 1.923465e-49 | 9.979510e-47 |
| MsG0280006634.01 | MsG0480022916.01 | 0.811555 | 6.602859e-51 | 4.099874e-48 |
| MsG0280006669.01 | MsG0480022916.01 | 0.809301 | 2.025068e-50 | 1.184643e-47 |
| MsG0280006931.01 | MsG0480022916.01 | 0.800669 | 1.292946e-48 | 6.055798e-46 |
| MsG0280007109.01 | MsG0480022916.01 | 0.833302 | 5.765832e-56 | 6.613326e-53 |
| MsG0280007775.01 | MsG0480022916.01 | 0.823022 | 1.732236e-53 | 1.474198e-50 |
| MsG0280008112.01 | MsG0480022916.01 | 0.820937 | 5.268253e-53 | 4.226845e-50 |
| MsG0280008113.01 | MsG0480022916.01 | 0.834119 | 3.602624e-56 | 4.234603e-53 |
| MsG0280008114.01 | MsG0480022916.01 | 0.806458 | 8.146364e-50 | 4.423996e-47 |
| MsG0280008363.01 | MsG0480022916.01 | 0.812862 | 3.423618e-51 | 2.201081e-48 |
| MsG0280008417.01 | MsG0480022916.01 | 0.814534 | 1.467377e-51 | 9.871686e-49 |
| MsG0280008738.01 | MsG0480022916.01 | 0.840098 | 1.066768e-57 | 1.503757e-54 |
| MsG0280008765.01 | MsG0480022916.01 | 0.812119 | 4.976150e-51 | 3.136731e-48 |
| MsG0280009024.01 | MsG0480022916.01 | 0.800833 | 1.197063e-48 | 5.630029e-46 |
| MsG0280009054.01 | MsG0480022916.01 | 0.805402 | 1.358205e-49 | 7.179069e-47 |
| MsG0280009350.01 | MsG0480022916.01 | 0.841520 | 4.521161e-58 | 6.660302e-55 |
| MsG0280009598.01 | MsG0480022916.01 | 0.826031 | 3.390561e-54 | 3.143093e-51 |
| MsG0280010152.01 | MsG0480022916.01 | 0.818289 | 2.118800e-52 | 1.579429e-49 |
| MsG0280010158.01 | MsG0480022916.01 | 0.819826 | 9.471893e-53 | 7.368376e-50 |
| MsG0280010233.01 | MsG0480022916.01 | 0.806345 | 8.607195e-50 | 4.660534e-47 |
| MsG0280010517.01 | MsG0480022916.01 | 0.800134 | 1.661561e-48 | 7.677342e-46 |
| MsG0280010531.01 | MsG0480022916.01 | 0.804861 | 1.762822e-49 | 9.189495e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022916.01.T01 | MTR_8g079910 | 100.000 | 69 | 0 | 0 | 28 | 96 | 186 | 254 | 4.55e-45 | 145 |
| MsG0480022916.01.T01 | MTR_8g079910 | 100.000 | 27 | 0 | 0 | 1 | 27 | 1 | 27 | 4.46e-11 | 57.4 |
| MsG0480022916.01.T01 | MTR_3g086130 | 92.754 | 69 | 5 | 0 | 28 | 96 | 191 | 259 | 2.27e-41 | 136 |
| MsG0480022916.01.T01 | MTR_4g088950 | 54.688 | 64 | 29 | 0 | 28 | 91 | 180 | 243 | 1.80e-18 | 77.0 |
| MsG0480022916.01.T01 | MTR_2g013080 | 50.000 | 68 | 34 | 0 | 28 | 95 | 183 | 250 | 2.89e-18 | 76.6 |
| MsG0480022916.01.T01 | MTR_4g015600 | 40.278 | 72 | 40 | 1 | 25 | 93 | 67 | 138 | 1.57e-15 | 67.4 |
| MsG0480022916.01.T01 | MTR_4g015600 | 40.278 | 72 | 40 | 1 | 25 | 93 | 123 | 194 | 3.65e-15 | 67.4 |
| MsG0480022916.01.T01 | MTR_4g015600 | 40.278 | 72 | 40 | 1 | 25 | 93 | 176 | 247 | 6.69e-15 | 67.8 |
| MsG0480022916.01.T01 | MTR_3g463720 | 48.387 | 62 | 32 | 0 | 30 | 91 | 177 | 238 | 5.85e-14 | 65.1 |
| MsG0480022916.01.T01 | MTR_3g463720 | 48.387 | 62 | 32 | 0 | 30 | 91 | 176 | 237 | 7.42e-14 | 64.7 |
| MsG0480022916.01.T01 | MTR_7g068290 | 47.170 | 53 | 28 | 0 | 28 | 80 | 175 | 227 | 8.35e-13 | 62.0 |
| MsG0480022916.01.T01 | MTR_8g079910 | 100.000 | 27 | 0 | 0 | 1 | 27 | 1 | 27 | 2.71e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022916.01.T01 | AT1G24440 | 86.957 | 69 | 9 | 0 | 28 | 96 | 151 | 219 | 1.78e-38 | 128 |
| MsG0480022916.01.T01 | AT1G24440 | 86.957 | 69 | 9 | 0 | 28 | 96 | 183 | 251 | 2.37e-38 | 128 |
| MsG0480022916.01.T01 | AT1G13195 | 77.612 | 67 | 15 | 0 | 28 | 94 | 152 | 218 | 1.32e-34 | 118 |
| MsG0480022916.01.T01 | AT1G13195 | 77.612 | 67 | 15 | 0 | 28 | 94 | 190 | 256 | 1.83e-34 | 119 |
| MsG0480022916.01.T01 | AT5G01520 | 50.943 | 53 | 26 | 0 | 28 | 80 | 174 | 226 | 2.56e-15 | 68.9 |
| MsG0480022916.01.T01 | AT3G47160 | 49.153 | 59 | 30 | 0 | 30 | 88 | 140 | 198 | 2.04e-14 | 65.9 |
| MsG0480022916.01.T01 | AT3G47160 | 49.153 | 59 | 30 | 0 | 30 | 88 | 177 | 235 | 2.50e-14 | 66.2 |
| MsG0480022916.01.T01 | AT3G47160 | 49.153 | 59 | 30 | 0 | 30 | 88 | 189 | 247 | 2.83e-14 | 66.2 |
| MsG0480022916.01.T01 | AT5G58787 | 40.678 | 59 | 35 | 0 | 30 | 88 | 174 | 232 | 2.77e-12 | 60.5 |
| MsG0480022916.01.T01 | AT5G58787 | 40.678 | 59 | 35 | 0 | 30 | 88 | 159 | 217 | 3.16e-12 | 60.5 |
| MsG0480022916.01.T01 | AT5G58787 | 40.678 | 59 | 35 | 0 | 30 | 88 | 140 | 198 | 3.30e-12 | 60.1 |
Find 40 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTGCTAAGATAGATTTC+TGG | 0.239079 | 4:-78554593 | MsG0480022916.01.T01:three_prime_UTR |
| GTATTTAAAGAGAAGGAAAA+AGG | 0.284024 | 4:+78556752 | None:intergenic |
| TGAACATGCATGACAGATAA+AGG | 0.287990 | 4:+78554415 | None:intergenic |
| AAGCCATACCTGACATGATT+AGG | 0.302127 | 4:+78554612 | None:intergenic |
| GAGTTAATTCAGAGGATCTA+TGG | 0.305552 | 4:-78554860 | MsG0480022916.01.T01:CDS |
| ACGACATTCCTCTTTGCTTT+TGG | 0.314181 | 4:-78556936 | MsG0480022916.01.T01:five_prime_UTR |
| TAGGCCAAGAGTGGTTATTC+TGG | 0.315886 | 4:+78554560 | None:intergenic |
| ATGGATGAGGATGAAGAAAA+AGG | 0.334416 | 4:+78556847 | None:intergenic |
| TACATTAAGAAAAGTGCATC+TGG | 0.335636 | 4:+78554738 | None:intergenic |
| AGTGCATCTGGGTAATCTTT+AGG | 0.345500 | 4:+78554750 | None:intergenic |
| GCATGACAGATAAAGGATAA+TGG | 0.409081 | 4:+78554422 | None:intergenic |
| TAGGTAAGCTGTTGATATAA+AGG | 0.419768 | 4:+78554769 | None:intergenic |
| AAACTTAGTCAACACTTGTT+CGG | 0.421802 | 4:-78556787 | MsG0480022916.01.T01:five_prime_UTR |
| TGATGAGTTAATATGAGAAA+TGG | 0.446833 | 4:+78556828 | None:intergenic |
| AGCCATACCTGACATGATTA+GGG | 0.449534 | 4:+78554613 | None:intergenic |
| CTACAGAGGAGATGATATAT+AGG | 0.468100 | 4:+78554541 | None:intergenic |
| GATCCCAGAATAACCACTCT+TGG | 0.474992 | 4:-78554564 | MsG0480022916.01.T01:three_prime_UTR |
| ACAAGTGTTGACTAAGTTTG+TGG | 0.479933 | 4:+78556791 | None:intergenic |
| TTCCCTAATCATGTCAGGTA+TGG | 0.482519 | 4:-78554615 | MsG0480022916.01.T01:three_prime_UTR |
| CTTATGCTCCCGCGGCAAAA+CGG | 0.489341 | 4:+78554885 | None:intergenic |
| GATTACTACAACTCAAACAA+AGG | 0.491285 | 4:+78554480 | None:intergenic |
| CTTCTCTGTATTTAAAGAGA+AGG | 0.494683 | 4:+78556745 | None:intergenic |
| AGGCCAAGAGTGGTTATTCT+GGG | 0.496249 | 4:+78554561 | None:intergenic |
| AAGAAGAAGAAGAAAAGAGA+AGG | 0.499184 | 4:+78556908 | None:intergenic |
| GAAATTTCCCTAATCATGTC+AGG | 0.499305 | 4:-78554620 | MsG0480022916.01.T01:three_prime_UTR |
| AGTTTAAGAGAATCATGATA+AGG | 0.504946 | 4:+78556672 | None:intergenic |
| CTGCAAATGTGAATAGAGTC+TGG | 0.506936 | 4:-78554646 | MsG0480022916.01.T01:three_prime_UTR |
| TGCTGAAACAGTTTCAAAAG+AGG | 0.534779 | 4:-78554808 | MsG0480022916.01.T01:CDS |
| TGATTCTCTTAAACTACTTG+AGG | 0.547630 | 4:-78556664 | MsG0480022916.01.T01:CDS |
| AGTTAATTCAGAGGATCTAT+GGG | 0.555807 | 4:-78554859 | MsG0480022916.01.T01:CDS |
| TAACTCTTCTTATGCTCCCG+CGG | 0.587616 | 4:+78554877 | None:intergenic |
| GGAGTTATGTTATGTTGTGG+TGG | 0.594490 | 4:+78556874 | None:intergenic |
| CATAAGAAGAGTTAATTCAG+AGG | 0.602522 | 4:-78554868 | MsG0480022916.01.T01:CDS |
| AAACATACAAAGCATTGGCA+TGG | 0.607704 | 4:+78556631 | None:intergenic |
| ACATTAAGAAAAGTGCATCT+GGG | 0.621660 | 4:+78554739 | None:intergenic |
| GTTAATATGAGAAATGGATG+AGG | 0.627157 | 4:+78556834 | None:intergenic |
| GATGATATATAGGCCAAGAG+TGG | 0.660695 | 4:+78554551 | None:intergenic |
| AAGGGAGTTATGTTATGTTG+TGG | 0.668255 | 4:+78556871 | None:intergenic |
| AGGAACTGCCAAAAGCAAAG+AGG | 0.676021 | 4:+78556928 | None:intergenic |
| TTACTCTACATTGTCTACAG+AGG | 0.688991 | 4:+78554527 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTTAATTGAGTA+AGG | - | Chr4:78556608-78556627 | MsG0480022916.01.T01:intron | 10.0% |
| !! | AAAGAAAAAAAAATTAGTGA+GGG | - | Chr4:78554584-78554603 | MsG0480022916.01.T01:three_prime_UTR | 15.0% |
| !! | TAACCTTGTATATAATTATA+TGG | + | Chr4:78555083-78555102 | None:intergenic | 15.0% |
| !! | TTACATATTACACTTATATT+TGG | + | Chr4:78555290-78555309 | None:intergenic | 15.0% |
| !! | AAAAAAAACATACAAAGCAT+TGG | + | Chr4:78554683-78554702 | None:intergenic | 20.0% |
| !! | AAAAAAAGTGGATAAGAAAA+AGG | + | Chr4:78554710-78554729 | None:intergenic | 20.0% |
| !! | AAAATAACTTCAACAACAAA+AGG | + | Chr4:78555793-78555812 | None:intergenic | 20.0% |
| !! | CAATTTCACATAAAGTAATA+TGG | + | Chr4:78556343-78556362 | None:intergenic | 20.0% |
| !! | CTTCCATATAATTATATACA+AGG | - | Chr4:78555077-78555096 | MsG0480022916.01.T01:intron | 20.0% |
| !! | GAAAGAAAAAAAAATTAGTG+AGG | - | Chr4:78554583-78554602 | MsG0480022916.01.T01:three_prime_UTR | 20.0% |
| !! | TATTTAAAGAGAAGGAAAAA+GGG | + | Chr4:78554556-78554575 | None:intergenic | 20.0% |
| !! | TGAAGAGAGAATTAAAAATA+TGG | + | Chr4:78555131-78555150 | None:intergenic | 20.0% |
| !!! | AAATTGATTCTTTGTTCAAA+AGG | - | Chr4:78554768-78554787 | MsG0480022916.01.T01:CDS | 20.0% |
| !!! | AATTGATTCTTTGTTCAAAA+GGG | - | Chr4:78554769-78554788 | MsG0480022916.01.T01:CDS | 20.0% |
| !!! | CATGATTAATTTTTTTCTAG+TGG | - | Chr4:78554799-78554818 | MsG0480022916.01.T01:CDS | 20.0% |
| !!! | TGTTTTATTTCTTTTGTTGT+TGG | - | Chr4:78555636-78555655 | MsG0480022916.01.T01:intron | 20.0% |
| !!! | TTGTTTCTGAAATTTTGTTT+TGG | - | Chr4:78554895-78554914 | MsG0480022916.01.T01:CDS | 20.0% |
| ! | AAAAAGGGAGAAATTAGTAA+AGG | + | Chr4:78555864-78555883 | None:intergenic | 25.0% |
| ! | AAAATTGCACATGAATGAAA+GGG | + | Chr4:78555258-78555277 | None:intergenic | 25.0% |
| ! | AACAGCTAAAGTTCAAAAAA+AGG | + | Chr4:78555880-78555899 | None:intergenic | 25.0% |
| ! | AAGGAGAAAAATATTCAGAT+TGG | - | Chr4:78556627-78556646 | MsG0480022916.01.T01:intron | 25.0% |
| ! | ACAGCTAAAGTTCAAAAAAA+GGG | + | Chr4:78555879-78555898 | None:intergenic | 25.0% |
| ! | AGGAGAAAAATATTCAGATT+GGG | - | Chr4:78556628-78556647 | MsG0480022916.01.T01:intron | 25.0% |
| ! | AGTTTAAGAGAATCATGATA+AGG | + | Chr4:78554637-78554656 | None:intergenic | 25.0% |
| ! | CAAATGTTATGATTGATTGA+TGG | + | Chr4:78556202-78556221 | None:intergenic | 25.0% |
| ! | CATCAATCAATCATAACATT+TGG | - | Chr4:78556200-78556219 | MsG0480022916.01.T01:intron | 25.0% |
| ! | GTATTTAAAGAGAAGGAAAA+AGG | + | Chr4:78554557-78554576 | None:intergenic | 25.0% |
| ! | TAAATTACAAACAAGCTTTG+AGG | + | Chr4:78555599-78555618 | None:intergenic | 25.0% |
| ! | TGAAAAGTTGTACAAATGAT+AGG | - | Chr4:78556258-78556277 | MsG0480022916.01.T01:intron | 25.0% |
| ! | TGATGAGTTAATATGAGAAA+TGG | + | Chr4:78554481-78554500 | None:intergenic | 25.0% |
| ! | TTGTTTAGTACAAAATGTTG+TGG | - | Chr4:78555476-78555495 | MsG0480022916.01.T01:intron | 25.0% |
| !! | GTTCTTCTTTTTCTTAACAA+AGG | - | Chr4:78555672-78555691 | MsG0480022916.01.T01:intron | 25.0% |
| !! | TTAACAAAGGTACATAATGA+TGG | - | Chr4:78555685-78555704 | MsG0480022916.01.T01:intron | 25.0% |
| !!! | ATCTGTTGATTCAATAAACT+TGG | - | Chr4:78555346-78555365 | MsG0480022916.01.T01:intron | 25.0% |
| !!! | TGATGTCTGATTTTTTTGTT+TGG | - | Chr4:78554842-78554861 | MsG0480022916.01.T01:CDS | 25.0% |
| !!! | TTTTTCTAGTGGTTAATCTA+TGG | - | Chr4:78554810-78554829 | MsG0480022916.01.T01:CDS | 25.0% |
| !!! | TTTTTTTGTTGTTGTTGCAA+TGG | - | Chr4:78555010-78555029 | MsG0480022916.01.T01:intron | 25.0% |
| AAAAAATTAGTGAGGGAAGA+TGG | - | Chr4:78554591-78554610 | MsG0480022916.01.T01:three_prime_UTR | 30.0% | |
| AAACTTAGTCAACACTTGTT+CGG | - | Chr4:78554519-78554538 | MsG0480022916.01.T01:three_prime_UTR | 30.0% | |
| AACACACACACAATAAAACA+TGG | + | Chr4:78554870-78554889 | None:intergenic | 30.0% | |
| AAGAAGAAGAAGAAAAGAGA+AGG | + | Chr4:78554401-78554420 | None:intergenic | 30.0% | |
| AAGAAGATGATTGAAGCAAA+TGG | - | Chr4:78555993-78556012 | MsG0480022916.01.T01:intron | 30.0% | |
| AAGTTGGAGATTTGTATGAA+AGG | - | Chr4:78555939-78555958 | MsG0480022916.01.T01:intron | 30.0% | |
| AGTTAATTCAGAGGATCTAT+GGG | - | Chr4:78556447-78556466 | MsG0480022916.01.T01:intron | 30.0% | |
| CATAAGAAGAGTTAATTCAG+AGG | - | Chr4:78556438-78556457 | MsG0480022916.01.T01:intron | 30.0% | |
| CTTCTCTGTATTTAAAGAGA+AGG | + | Chr4:78554564-78554583 | None:intergenic | 30.0% | |
| GAAAATTGCACATGAATGAA+AGG | + | Chr4:78555259-78555278 | None:intergenic | 30.0% | |
| GACTGTAAACCAATTTCATT+TGG | + | Chr4:78554978-78554997 | None:intergenic | 30.0% | |
| GATTACTACAACTCAAACAA+AGG | + | Chr4:78556829-78556848 | None:intergenic | 30.0% | |
| GGAGAAAAATATTCAGATTG+GGG | - | Chr4:78556629-78556648 | MsG0480022916.01.T01:intron | 30.0% | |
| GTTAATATGAGAAATGGATG+AGG | + | Chr4:78554475-78554494 | None:intergenic | 30.0% | |
| TACAAAATGTTGTGGAATAC+CGG | - | Chr4:78555484-78555503 | MsG0480022916.01.T01:intron | 30.0% | |
| TACAAATGATAGGTTGTGAT+TGG | - | Chr4:78556268-78556287 | MsG0480022916.01.T01:intron | 30.0% | |
| TAGGTAAGCTGTTGATATAA+AGG | + | Chr4:78556540-78556559 | None:intergenic | 30.0% | |
| TGATTCTCTTAAACTACTTG+AGG | - | Chr4:78554642-78554661 | MsG0480022916.01.T01:three_prime_UTR | 30.0% | |
| TGCAACAACAACAAAAAAAG+AGG | + | Chr4:78555009-78555028 | None:intergenic | 30.0% | |
| TTCTCTTTCCAAATCAACAT+TGG | + | Chr4:78556030-78556049 | None:intergenic | 30.0% | |
| TTGTTAATTAGTGGCTATAG+TGG | - | Chr4:78555396-78555415 | MsG0480022916.01.T01:intron | 30.0% | |
| ! | ACATTAAGAAAAGTGCATCT+GGG | + | Chr4:78556570-78556589 | None:intergenic | 30.0% |
| ! | CATTTGTACAACTTTTCAGT+TGG | + | Chr4:78556256-78556275 | None:intergenic | 30.0% |
| ! | GAAATTGGTTTACAGTCAAT+TGG | - | Chr4:78554981-78555000 | MsG0480022916.01.T01:intron | 30.0% |
| ! | GAGTGTTTTCCAAATGAAAT+TGG | - | Chr4:78554966-78554985 | MsG0480022916.01.T01:intron | 30.0% |
| ! | TACATTAAGAAAAGTGCATC+TGG | + | Chr4:78556571-78556590 | None:intergenic | 30.0% |
| ! | TTCTCAGTGTTGTTAATTAG+TGG | - | Chr4:78555387-78555406 | MsG0480022916.01.T01:intron | 30.0% |
| !! | AGGTGTCTTTTAAAAGTCAA+AGG | + | Chr4:78555773-78555792 | None:intergenic | 30.0% |
| !! | TGGTTATGTGTTGTTGTTTA+GGG | - | Chr4:78554915-78554934 | MsG0480022916.01.T01:intron | 30.0% |
| !! | TTGGTTATGTGTTGTTGTTT+AGG | - | Chr4:78554914-78554933 | MsG0480022916.01.T01:intron | 30.0% |
| AAGGGAGTTATGTTATGTTG+TGG | + | Chr4:78554438-78554457 | None:intergenic | 35.0% | |
| ACTTTGTGTTCCTGCAAAAT+TGG | + | Chr4:78556390-78556409 | None:intergenic | 35.0% | |
| AGACCAAGTATAACTTCTCA+TGG | - | Chr4:78555709-78555728 | MsG0480022916.01.T01:intron | 35.0% | |
| ATGGATGAGGATGAAGAAAA+AGG | + | Chr4:78554462-78554481 | None:intergenic | 35.0% | |
| CAAGTATAACTTCTCATGGA+AGG | - | Chr4:78555713-78555732 | MsG0480022916.01.T01:intron | 35.0% | |
| CTACAGAGGAGATGATATAT+AGG | + | Chr4:78556768-78556787 | None:intergenic | 35.0% | |
| CTCTCTTCAAAGAGTTCAAA+GGG | - | Chr4:78555142-78555161 | MsG0480022916.01.T01:intron | 35.0% | |
| CTTCCATGAGAAGTTATACT+TGG | + | Chr4:78555715-78555734 | None:intergenic | 35.0% | |
| GAAATTTCCCTAATCATGTC+AGG | - | Chr4:78556686-78556705 | MsG0480022916.01.T01:CDS | 35.0% | |
| GAGGATGAAGAAAAAGGAAA+GGG | + | Chr4:78554456-78554475 | None:intergenic | 35.0% | |
| GAGTTAATTCAGAGGATCTA+TGG | - | Chr4:78556446-78556465 | MsG0480022916.01.T01:intron | 35.0% | |
| GCATGACAGATAAAGGATAA+TGG | + | Chr4:78556887-78556906 | None:intergenic | 35.0% | |
| GCTTTGCTAAGATAGATTTC+TGG | - | Chr4:78556713-78556732 | MsG0480022916.01.T01:exon | 35.0% | |
| TCTCTCTTCAAAGAGTTCAA+AGG | - | Chr4:78555141-78555160 | MsG0480022916.01.T01:intron | 35.0% | |
| TCTTTCCAAATCAACATTGG+TGG | + | Chr4:78556027-78556046 | None:intergenic | 35.0% | |
| TGAACATGCATGACAGATAA+AGG | + | Chr4:78556894-78556913 | None:intergenic | 35.0% | |
| TGAGGATGAAGAAAAAGGAA+AGG | + | Chr4:78554457-78554476 | None:intergenic | 35.0% | |
| TGCTGAAACAGTTTCAAAAG+AGG | - | Chr4:78556498-78556517 | MsG0480022916.01.T01:intron | 35.0% | |
| TGGAAAGAGAAGATGAATGT+GGG | - | Chr4:78556039-78556058 | MsG0480022916.01.T01:intron | 35.0% | |
| TTACTCTACATTGTCTACAG+AGG | + | Chr4:78556782-78556801 | None:intergenic | 35.0% | |
| TTGGAAAGAGAAGATGAATG+TGG | - | Chr4:78556038-78556057 | MsG0480022916.01.T01:intron | 35.0% | |
| ! | ACTAACCACCAATGTTGATT+TGG | - | Chr4:78556019-78556038 | MsG0480022916.01.T01:intron | 35.0% |
| !! | AAACATACAAAGCATTGGCA+TGG | + | Chr4:78554678-78554697 | None:intergenic | 35.0% |
| !! | ACAAGTGTTGACTAAGTTTG+TGG | + | Chr4:78554518-78554537 | None:intergenic | 35.0% |
| !! | AGCACACTTTCTTTTGTTGT+TGG | + | Chr4:78555827-78555846 | None:intergenic | 35.0% |
| !! | TGCGAGGTTGTATTTTTAAG+AGG | - | Chr4:78555187-78555206 | MsG0480022916.01.T01:intron | 35.0% |
| !! | TTTGTTGTTGTTGCAATGGA+TGG | - | Chr4:78555014-78555033 | MsG0480022916.01.T01:intron | 35.0% |
| !!! | ACACTTTCTTTTGTTGTTGG+GGG | + | Chr4:78555824-78555843 | None:intergenic | 35.0% |
| !!! | CACACTTTCTTTTGTTGTTG+GGG | + | Chr4:78555825-78555844 | None:intergenic | 35.0% |
| !!! | GCACACTTTCTTTTGTTGTT+GGG | + | Chr4:78555826-78555845 | None:intergenic | 35.0% |
| !!! | GCTTTTTTCTGGTTAGGATT+AGG | - | Chr4:78555571-78555590 | MsG0480022916.01.T01:intron | 35.0% |
| AAGCCATACCTGACATGATT+AGG | + | Chr4:78556697-78556716 | None:intergenic | 40.0% | |
| AGCCATACCTGACATGATTA+GGG | + | Chr4:78556696-78556715 | None:intergenic | 40.0% | |
| AGTGCATCTGGGTAATCTTT+AGG | + | Chr4:78556559-78556578 | None:intergenic | 40.0% | |
| ATAACTTGAACCGTCTAAGC+TGG | + | Chr4:78555970-78555989 | None:intergenic | 40.0% | |
| CTGCAAATGTGAATAGAGTC+TGG | - | Chr4:78556660-78556679 | MsG0480022916.01.T01:CDS | 40.0% | |
| CTTAGAACCATGCACCAAAA+TGG | - | Chr4:78556067-78556086 | MsG0480022916.01.T01:intron | 40.0% | |
| GATGATATATAGGCCAAGAG+TGG | + | Chr4:78556758-78556777 | None:intergenic | 40.0% | |
| GGAGTTATGTTATGTTGTGG+TGG | + | Chr4:78554435-78554454 | None:intergenic | 40.0% | |
| GTTAGTCAATTCCTCAATGC+TGG | - | Chr4:78555099-78555118 | MsG0480022916.01.T01:intron | 40.0% | |
| TATGGAAAACACCAGCATTG+AGG | + | Chr4:78555113-78555132 | None:intergenic | 40.0% | |
| TCATGGTAGTTTGGAGAAGT+TGG | - | Chr4:78555923-78555942 | MsG0480022916.01.T01:intron | 40.0% | |
| TTATATTACCGTCTCTCCAG+CGG | - | Chr4:78555898-78555917 | MsG0480022916.01.T01:intron | 40.0% | |
| TTCACACACCATAAAAGTCC+TGG | + | Chr4:78555750-78555769 | None:intergenic | 40.0% | |
| TTCCCTAATCATGTCAGGTA+TGG | - | Chr4:78556691-78556710 | MsG0480022916.01.T01:CDS | 40.0% | |
| ! | AAAAAGCGTGCTGTCAATTG+TGG | + | Chr4:78555558-78555577 | None:intergenic | 40.0% |
| ! | ACGACATTCCTCTTTGCTTT+TGG | - | Chr4:78554370-78554389 | MsG0480022916.01.T01:three_prime_UTR | 40.0% |
| ! | AGCTTAGACGGTTCAAGTTA+TGG | - | Chr4:78555969-78555988 | MsG0480022916.01.T01:intron | 40.0% |
| ! | ATAGCAATGTTTTGTCTGCG+AGG | - | Chr4:78555171-78555190 | MsG0480022916.01.T01:intron | 40.0% |
| ! | CACTCTTATGCCAATTTTGC+AGG | - | Chr4:78556377-78556396 | MsG0480022916.01.T01:intron | 40.0% |
| ! | GATAGGTTGTGATTGGTTGA+CGG | - | Chr4:78556275-78556294 | MsG0480022916.01.T01:intron | 40.0% |
| ! | GCAGTTAGGCAAAACCATTT+TGG | + | Chr4:78556084-78556103 | None:intergenic | 40.0% |
| ! | GGATGATTTTGCCATCCAAA+AGG | - | Chr4:78555208-78555227 | MsG0480022916.01.T01:intron | 40.0% |
| !!! | ATTGACAGCACGCTTTTTTC+TGG | - | Chr4:78555560-78555579 | MsG0480022916.01.T01:intron | 40.0% |
| AAAGGACACACCAGCTTAGA+CGG | - | Chr4:78555957-78555976 | MsG0480022916.01.T01:intron | 45.0% | |
| AGGAACTGCCAAAAGCAAAG+AGG | + | Chr4:78554381-78554400 | None:intergenic | 45.0% | |
| AGGCCAAGAGTGGTTATTCT+GGG | + | Chr4:78556748-78556767 | None:intergenic | 45.0% | |
| ATGTGATCACCAACCACTTG+CGG | + | Chr4:78556133-78556152 | None:intergenic | 45.0% | |
| CACACCATAAAAGTCCTGGA+TGG | + | Chr4:78555746-78555765 | None:intergenic | 45.0% | |
| CACATAGCATGACAGCAGTT+AGG | + | Chr4:78556098-78556117 | None:intergenic | 45.0% | |
| GATCCCAGAATAACCACTCT+TGG | - | Chr4:78556742-78556761 | MsG0480022916.01.T01:five_prime_UTR | 45.0% | |
| GCACATGAATGAAAGGGAAG+CGG | + | Chr4:78555252-78555271 | None:intergenic | 45.0% | |
| GTATCAAATGCTACCGCAAG+TGG | - | Chr4:78556117-78556136 | MsG0480022916.01.T01:intron | 45.0% | |
| TAACTCTTCTTATGCTCCCG+CGG | + | Chr4:78556432-78556451 | None:intergenic | 45.0% | |
| TAGGCCAAGAGTGGTTATTC+TGG | + | Chr4:78556749-78556768 | None:intergenic | 45.0% | |
| ! | GCAACCATCCAGGACTTTTA+TGG | - | Chr4:78555739-78555758 | MsG0480022916.01.T01:intron | 45.0% |
| !! | GGCAAAACCATTTTGGTGCA+TGG | + | Chr4:78556077-78556096 | None:intergenic | 45.0% |
| !!! | CAGCACGCTTTTTTCTGGTT+AGG | - | Chr4:78555565-78555584 | MsG0480022916.01.T01:intron | 45.0% |
| !! | AAAATATATAAAAAAAAAAG+TGG | + | Chr4:78554722-78554741 | None:intergenic | 5.0% |
| CAAATGCTACCGCAAGTGGT+TGG | - | Chr4:78556121-78556140 | MsG0480022916.01.T01:intron | 50.0% | |
| CAATTCCAAGAGGCAAGGGT+GGG | - | Chr4:78554944-78554963 | MsG0480022916.01.T01:intron | 50.0% | |
| CCGCTACACAACAACACTAC+CGG | + | Chr4:78555506-78555525 | None:intergenic | 50.0% | |
| GCTATAGCGCAGTTGCATAG+AGG | - | Chr4:78555420-78555439 | MsG0480022916.01.T01:intron | 50.0% | |
| GCTGCAATTCCAAGAGGCAA+GGG | - | Chr4:78554940-78554959 | MsG0480022916.01.T01:intron | 50.0% | |
| TGCTGCAATTCCAAGAGGCA+AGG | - | Chr4:78554939-78554958 | MsG0480022916.01.T01:intron | 50.0% | |
| TGGAAGGAAAGCAACCATCC+AGG | - | Chr4:78555729-78555748 | MsG0480022916.01.T01:intron | 50.0% | |
| ! | CCGGTAGTGTTGTTGTGTAG+CGG | - | Chr4:78555503-78555522 | MsG0480022916.01.T01:intron | 50.0% |
| ! | GTAAGCTGCACGCTACCTTT+TGG | + | Chr4:78555226-78555245 | None:intergenic | 50.0% |
| AGGGCTGCTGCAATTCCAAG+AGG | - | Chr4:78554934-78554953 | MsG0480022916.01.T01:intron | 55.0% | |
| CCAAACTACCATGAAGCCGC+TGG | + | Chr4:78555917-78555936 | None:intergenic | 55.0% | |
| CCAGCGGCTTCATGGTAGTT+TGG | - | Chr4:78555914-78555933 | MsG0480022916.01.T01:intron | 55.0% | |
| CTTATGCTCCCGCGGCAAAA+CGG | + | Chr4:78556424-78556443 | None:intergenic | 55.0% | |
| GCAATTCCAAGAGGCAAGGG+TGG | - | Chr4:78554943-78554962 | MsG0480022916.01.T01:intron | 55.0% | |
| ! | GCTGCACGCTACCTTTTGGA+TGG | + | Chr4:78555222-78555241 | None:intergenic | 55.0% |
| !! | AGTCTTGTCCGTTTTGCCGC+GGG | - | Chr4:78556413-78556432 | MsG0480022916.01.T01:intron | 55.0% |
| !! | GAGTCTTGTCCGTTTTGCCG+CGG | - | Chr4:78556412-78556431 | MsG0480022916.01.T01:intron | 55.0% |
| ACACTCCCACCCTTGCCTCT+TGG | + | Chr4:78554952-78554971 | None:intergenic | 60.0% | |
| CCATGAAGCCGCTGGAGAGA+CGG | + | Chr4:78555909-78555928 | None:intergenic | 60.0% | |
| CCGTCTCTCCAGCGGCTTCA+TGG | - | Chr4:78555906-78555925 | MsG0480022916.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 78554358 | 78556970 | 78554358 | ID=MsG0480022916.01;Name=MsG0480022916.01 |
| Chr4 | mRNA | 78554358 | 78556970 | 78554358 | ID=MsG0480022916.01.T01;Parent=MsG0480022916.01;Name=MsG0480022916.01.T01;_AED=0.49;_eAED=0.49;_QI=252|0|1|1|1|1|2|361|96 |
| Chr4 | exon | 78554358 | 78554929 | 78554358 | ID=MsG0480022916.01.T01:exon:32270;Parent=MsG0480022916.01.T01 |
| Chr4 | exon | 78556639 | 78556970 | 78556639 | ID=MsG0480022916.01.T01:exon:32269;Parent=MsG0480022916.01.T01 |
| Chr4 | five_prime_UTR | 78556719 | 78556970 | 78556719 | ID=MsG0480022916.01.T01:five_prime_utr;Parent=MsG0480022916.01.T01 |
| Chr4 | CDS | 78556639 | 78556718 | 78556639 | ID=MsG0480022916.01.T01:cds;Parent=MsG0480022916.01.T01 |
| Chr4 | CDS | 78554719 | 78554929 | 78554719 | ID=MsG0480022916.01.T01:cds;Parent=MsG0480022916.01.T01 |
| Chr4 | three_prime_UTR | 78554358 | 78554718 | 78554358 | ID=MsG0480022916.01.T01:three_prime_utr;Parent=MsG0480022916.01.T01 |
| Gene Sequence |
| Protein sequence |
