Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007506.01.T01 | GAU38980.1 | 78.947 | 171 | 24 | 1 | 1 | 171 | 42 | 200 | 7.98E-82 | 256 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007506.01.T01 | Q9C5D3 | 51.163 | 172 | 69 | 1 | 1 | 172 | 81 | 237 | 5.42E-35 | 131 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007506.01.T01 | A0A2Z6NQL4 | 78.947 | 171 | 24 | 1 | 1 | 171 | 42 | 200 | 3.81e-82 | 256 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048291.01 | MsG0280007506.01 | 0.800151 | 1.648426e-48 | 7.619759e-46 |
| MsG0080048357.01 | MsG0280007506.01 | 0.806612 | 7.558783e-50 | 4.120871e-47 |
| MsG0080048404.01 | MsG0280007506.01 | 0.806137 | 9.519717e-50 | 5.127580e-47 |
| MsG0180000139.01 | MsG0280007506.01 | 0.811837 | 5.733058e-51 | 3.586300e-48 |
| MsG0180000155.01 | MsG0280007506.01 | 0.806367 | 8.513234e-50 | 4.612309e-47 |
| MsG0180000404.01 | MsG0280007506.01 | 0.811180 | 7.966036e-51 | 4.897484e-48 |
| MsG0180001886.01 | MsG0280007506.01 | 0.802535 | 5.357046e-49 | 2.630645e-46 |
| MsG0180001892.01 | MsG0280007506.01 | 0.826197 | 3.095599e-54 | 2.883338e-51 |
| MsG0180003094.01 | MsG0280007506.01 | 0.822698 | 2.061002e-53 | 1.737911e-50 |
| MsG0180003403.01 | MsG0280007506.01 | 0.828341 | 9.485535e-55 | 9.401337e-52 |
| MsG0180003548.01 | MsG0280007506.01 | 0.809339 | 1.987394e-50 | 1.163791e-47 |
| MsG0180003572.01 | MsG0280007506.01 | 0.810458 | 1.141254e-50 | 6.882722e-48 |
| MsG0180003741.01 | MsG0280007506.01 | 0.843889 | 1.061575e-58 | 1.684781e-55 |
| MsG0180003920.01 | MsG0280007506.01 | 0.822787 | 1.964538e-53 | 1.660770e-50 |
| MsG0180003943.01 | MsG0280007506.01 | 0.808459 | 3.066019e-50 | 1.754092e-47 |
| MsG0180003951.01 | MsG0280007506.01 | 0.814000 | 1.924832e-51 | 1.276293e-48 |
| MsG0180004049.01 | MsG0280007506.01 | 0.820741 | 5.845003e-53 | 4.663673e-50 |
| MsG0180004099.01 | MsG0280007506.01 | 0.813507 | 2.472031e-51 | 1.617397e-48 |
| MsG0180004152.01 | MsG0280007506.01 | 0.811956 | 5.401559e-51 | 3.389833e-48 |
| MsG0180004249.01 | MsG0280007506.01 | 0.845216 | 4.662801e-59 | 7.715393e-56 |
| MsG0180004389.01 | MsG0280007506.01 | 0.825137 | 5.523081e-54 | 4.991588e-51 |
| MsG0180004481.01 | MsG0280007506.01 | 0.813855 | 2.072318e-51 | 1.368657e-48 |
| MsG0180004482.01 | MsG0280007506.01 | 0.803187 | 3.929943e-49 | 1.962191e-46 |
| MsG0180004509.01 | MsG0280007506.01 | 0.804388 | 2.213010e-49 | 1.139544e-46 |
| MsG0180004765.01 | MsG0280007506.01 | 0.802005 | 6.888110e-49 | 3.337065e-46 |
| MsG0180004928.01 | MsG0280007506.01 | 0.818731 | 1.682308e-52 | 1.269463e-49 |
| MsG0180005049.01 | MsG0280007506.01 | 0.802909 | 4.484882e-49 | 2.223491e-46 |
| MsG0180005113.01 | MsG0280007506.01 | 0.809434 | 1.895936e-50 | 1.113044e-47 |
| MsG0180005153.01 | MsG0280007506.01 | 0.832957 | 7.025961e-56 | 7.975770e-53 |
| MsG0180005524.01 | MsG0280007506.01 | 0.815720 | 8.000465e-52 | 5.558971e-49 |
| MsG0180005575.01 | MsG0280007506.01 | 0.849271 | 3.600197e-60 | 6.788654e-57 |
| MsG0180005746.01 | MsG0280007506.01 | 0.812389 | 4.345249e-51 | 2.759284e-48 |
| MsG0180005962.01 | MsG0280007506.01 | -0.828218 | 1.015904e-54 | 1.003332e-51 |
| MsG0180006017.01 | MsG0280007506.01 | 0.841222 | 5.415101e-58 | 7.902794e-55 |
| MsG0180006024.01 | MsG0280007506.01 | 0.835527 | 1.593583e-56 | 1.953802e-53 |
| MsG0280006405.01 | MsG0280007506.01 | 0.813753 | 2.182165e-51 | 1.437240e-48 |
| MsG0280007452.01 | MsG0280007506.01 | 0.849722 | 2.694241e-60 | 5.154960e-57 |
| MsG0280007506.01 | MsG0280007527.01 | 0.830480 | 2.868507e-55 | 3.025704e-52 |
| MsG0280007506.01 | MsG0280007955.01 | 0.874581 | 6.039691e-68 | 2.732963e-64 |
| MsG0280007506.01 | MsG0280008361.01 | 0.800513 | 1.391202e-48 | 6.490167e-46 |
| MsG0280007506.01 | MsG0280008377.01 | 0.814078 | 1.850234e-51 | 1.229422e-48 |
| MsG0280007506.01 | MsG0280008390.01 | 0.812260 | 4.636220e-51 | 2.933799e-48 |
| MsG0280007506.01 | MsG0280008391.01 | 0.816024 | 6.844262e-52 | 4.795245e-49 |
| MsG0280007506.01 | MsG0280008392.01 | 0.801745 | 7.788005e-49 | 3.748162e-46 |
| MsG0280007506.01 | MsG0280008395.01 | 0.802386 | 5.750729e-49 | 2.813404e-46 |
| MsG0280007506.01 | MsG0280008457.01 | 0.837835 | 4.111372e-57 | 5.406706e-54 |
| MsG0280007506.01 | MsG0280008764.01 | 0.818224 | 2.191498e-52 | 1.630707e-49 |
| MsG0280007506.01 | MsG0280009794.01 | 0.832599 | 8.623113e-56 | 9.684513e-53 |
| MsG0280007506.01 | MsG0280010152.01 | 0.808882 | 2.488935e-50 | 1.439721e-47 |
| MsG0280007506.01 | MsG0280010489.01 | 0.831517 | 1.595911e-55 | 1.735977e-52 |
| MsG0280007506.01 | MsG0280010778.01 | 0.832479 | 9.235184e-56 | 1.033496e-52 |
| MsG0280007506.01 | MsG0280010788.01 | 0.808594 | 2.868880e-50 | 1.646991e-47 |
| MsG0280007506.01 | MsG0280011003.01 | 0.820379 | 7.075855e-53 | 5.590050e-50 |
| MsG0280007506.01 | MsG0280011013.01 | 0.814148 | 1.785221e-51 | 1.188498e-48 |
| MsG0280007506.01 | MsG0280011014.01 | 0.840021 | 1.116988e-57 | 1.570894e-54 |
| MsG0280007506.01 | MsG0280011101.01 | 0.819623 | 1.053884e-52 | 8.151513e-50 |
| MsG0280007506.01 | MsG0280011258.01 | 0.814045 | 1.881472e-51 | 1.249074e-48 |
| MsG0280007506.01 | MsG0280011319.01 | 0.809637 | 1.714667e-50 | 1.012151e-47 |
| MsG0280007506.01 | MsG0280011339.01 | 0.806158 | 9.423958e-50 | 5.078795e-47 |
| MsG0280007506.01 | MsG0280011340.01 | 0.808030 | 3.783937e-50 | 2.140389e-47 |
| MsG0280007506.01 | MsG0380011496.01 | 0.858510 | 7.839605e-63 | 2.005675e-59 |
| MsG0280007506.01 | MsG0380011501.01 | 0.864130 | 1.516577e-64 | 4.710112e-61 |
| MsG0280007506.01 | MsG0380013183.01 | 0.812240 | 4.683028e-51 | 2.961787e-48 |
| MsG0280007506.01 | MsG0380013475.01 | 0.800535 | 1.377138e-48 | 6.428022e-46 |
| MsG0280007506.01 | MsG0380014097.01 | 0.801802 | 7.581747e-49 | 3.654271e-46 |
| MsG0280007506.01 | MsG0380014537.01 | 0.815423 | 9.317147e-52 | 6.421026e-49 |
| MsG0280007506.01 | MsG0380014701.01 | 0.801977 | 6.980473e-49 | 3.379245e-46 |
| MsG0280007506.01 | MsG0380014703.01 | 0.802464 | 5.541704e-49 | 2.716396e-46 |
| MsG0280007506.01 | MsG0380015332.01 | 0.818966 | 1.487203e-52 | 1.129714e-49 |
| MsG0280007506.01 | MsG0380015463.01 | 0.813771 | 2.162037e-51 | 1.424668e-48 |
| MsG0280007506.01 | MsG0380015555.01 | 0.814329 | 1.628873e-51 | 1.089742e-48 |
| MsG0280007506.01 | MsG0380015786.01 | 0.819145 | 1.354239e-52 | 1.033627e-49 |
| MsG0280007506.01 | MsG0380015944.01 | 0.806316 | 8.729681e-50 | 4.723395e-47 |
| MsG0280007506.01 | MsG0380016005.01 | 0.812708 | 3.701308e-51 | 2.370121e-48 |
| MsG0280007506.01 | MsG0380016067.01 | 0.803020 | 4.253978e-49 | 2.114812e-46 |
| MsG0280007506.01 | MsG0380016671.01 | 0.801624 | 8.247646e-49 | 3.957111e-46 |
| MsG0280007506.01 | MsG0380016860.01 | 0.821194 | 4.595133e-53 | 3.713378e-50 |
| MsG0280007506.01 | MsG0380016893.01 | 0.815248 | 1.018871e-51 | 6.987599e-49 |
| MsG0280007506.01 | MsG0380016970.01 | 0.815882 | 7.359789e-52 | 5.136109e-49 |
| MsG0280007506.01 | MsG0380017351.01 | 0.813781 | 2.150847e-51 | 1.417699e-48 |
| MsG0280007506.01 | MsG0480018278.01 | 0.804306 | 2.300949e-49 | 1.182365e-46 |
| MsG0280007506.01 | MsG0480018894.01 | 0.810552 | 1.089359e-50 | 6.586318e-48 |
| MsG0280007506.01 | MsG0480019416.01 | 0.810777 | 9.736465e-51 | 5.922580e-48 |
| MsG0280007506.01 | MsG0480019710.01 | 0.839059 | 1.987470e-57 | 2.712811e-54 |
| MsG0280007506.01 | MsG0480020447.01 | 0.818444 | 1.953656e-52 | 1.462821e-49 |
| MsG0280007506.01 | MsG0480020495.01 | 0.800432 | 1.445317e-48 | 6.728884e-46 |
| MsG0280007506.01 | MsG0480020739.01 | 0.813587 | 2.374051e-51 | 1.556626e-48 |
| MsG0280007506.01 | MsG0480020780.01 | 0.822237 | 2.637570e-53 | 2.195026e-50 |
| MsG0280007506.01 | MsG0480020879.01 | 0.802830 | 4.657966e-49 | 2.304770e-46 |
| MsG0280007506.01 | MsG0480021056.01 | 0.802946 | 4.406140e-49 | 2.186399e-46 |
| MsG0280007506.01 | MsG0480021195.01 | 0.810741 | 9.911746e-51 | 6.023343e-48 |
| MsG0280007506.01 | MsG0480021452.01 | 0.827406 | 1.592421e-54 | 1.536064e-51 |
| MsG0280007506.01 | MsG0480021465.01 | 0.813490 | 2.492453e-51 | 1.630079e-48 |
| MsG0280007506.01 | MsG0480022054.01 | 0.811051 | 8.495622e-51 | 5.205536e-48 |
| MsG0280007506.01 | MsG0480022514.01 | 0.805140 | 1.541212e-49 | 8.091800e-47 |
| MsG0280007506.01 | MsG0480022586.01 | 0.803872 | 2.832902e-49 | 1.439641e-46 |
| MsG0280007506.01 | MsG0480022696.01 | 0.826607 | 2.472029e-54 | 2.329388e-51 |
| MsG0280007506.01 | MsG0480023221.01 | 0.807072 | 6.042070e-50 | 3.333397e-47 |
| MsG0280007506.01 | MsG0480023463.01 | 0.814592 | 1.424402e-51 | 9.597638e-49 |
| MsG0280007506.01 | MsG0480023600.01 | 0.806543 | 7.818059e-50 | 4.254896e-47 |
| MsG0280007506.01 | MsG0480023639.01 | 0.810143 | 1.334475e-50 | 7.981875e-48 |
| MsG0280007506.01 | MsG0480024022.01 | 0.817402 | 3.360264e-52 | 2.444738e-49 |
| MsG0280007506.01 | MsG0580024115.01 | 0.805364 | 1.383193e-49 | 7.304019e-47 |
| MsG0280007506.01 | MsG0580024185.01 | 0.809146 | 2.185218e-50 | 1.273092e-47 |
| MsG0280007506.01 | MsG0580024197.01 | 0.829903 | 3.967292e-55 | 4.116244e-52 |
| MsG0280007506.01 | MsG0580024339.01 | 0.803246 | 3.820557e-49 | 1.910446e-46 |
| MsG0280007506.01 | MsG0580024463.01 | 0.826399 | 2.771350e-54 | 2.596193e-51 |
| MsG0280007506.01 | MsG0580024619.01 | 0.807842 | 4.148496e-50 | 2.335023e-47 |
| MsG0280007506.01 | MsG0580024981.01 | 0.809059 | 2.281401e-50 | 1.325970e-47 |
| MsG0280007506.01 | MsG0580025357.01 | -0.821447 | 4.019305e-53 | 3.270700e-50 |
| MsG0280007506.01 | MsG0580025466.01 | 0.814223 | 1.718398e-51 | 1.146306e-48 |
| MsG0280007506.01 | MsG0580025587.01 | 0.839437 | 1.585442e-57 | 2.189504e-54 |
| MsG0280007506.01 | MsG0580025661.01 | 0.822494 | 2.299136e-53 | 1.927460e-50 |
| MsG0280007506.01 | MsG0580025742.01 | 0.802506 | 5.431782e-49 | 2.665402e-46 |
| MsG0280007506.01 | MsG0580026059.01 | 0.822862 | 1.887750e-53 | 1.599242e-50 |
| MsG0280007506.01 | MsG0580027431.01 | 0.806900 | 6.571599e-50 | 3.609395e-47 |
| MsG0280007506.01 | MsG0580027616.01 | 0.802764 | 4.806328e-49 | 2.374081e-46 |
| MsG0280007506.01 | MsG0580027650.01 | 0.834160 | 3.519624e-56 | 4.141690e-53 |
| MsG0280007506.01 | MsG0580027925.01 | 0.880703 | 4.411588e-70 | 2.512982e-66 |
| MsG0280007506.01 | MsG0580028436.01 | 0.830119 | 3.513237e-55 | 3.667480e-52 |
| MsG0280007506.01 | MsG0580029127.01 | 0.813854 | 2.072836e-51 | 1.368977e-48 |
| MsG0280007506.01 | MsG0580029236.01 | 0.825682 | 4.104068e-54 | 3.766893e-51 |
| MsG0280007506.01 | MsG0580029310.01 | 0.811375 | 7.225404e-51 | 4.465143e-48 |
| MsG0280007506.01 | MsG0580029736.01 | 0.811201 | 7.882516e-51 | 4.848868e-48 |
| MsG0280007506.01 | MsG0680030328.01 | 0.828536 | 8.514018e-55 | 8.486809e-52 |
| MsG0280007506.01 | MsG0680030447.01 | 0.829462 | 5.079122e-55 | 5.201938e-52 |
| MsG0280007506.01 | MsG0680030881.01 | 0.822156 | 2.753761e-53 | 2.286373e-50 |
| MsG0280007506.01 | MsG0680031264.01 | 0.801522 | 8.652821e-49 | 4.141119e-46 |
| MsG0280007506.01 | MsG0680031342.01 | 0.800737 | 1.252495e-48 | 5.876354e-46 |
| MsG0280007506.01 | MsG0680031431.01 | 0.803498 | 3.387735e-49 | 1.705075e-46 |
| MsG0280007506.01 | MsG0680031506.01 | 0.809979 | 1.447350e-50 | 8.620508e-48 |
| MsG0280007506.01 | MsG0680031507.01 | 0.803463 | 3.445292e-49 | 1.732452e-46 |
| MsG0280007506.01 | MsG0680031621.01 | 0.824753 | 6.802339e-54 | 6.080935e-51 |
| MsG0280007506.01 | MsG0680031628.01 | 0.811540 | 6.653818e-51 | 4.129887e-48 |
| MsG0280007506.01 | MsG0680031959.01 | 0.833985 | 3.893209e-56 | 4.558186e-53 |
| MsG0280007506.01 | MsG0680034853.01 | 0.872593 | 2.822202e-67 | 1.187788e-63 |
| MsG0280007506.01 | MsG0680035475.01 | 0.821483 | 3.941958e-53 | 3.211010e-50 |
| MsG0280007506.01 | MsG0680035498.01 | 0.812379 | 4.368036e-51 | 2.772855e-48 |
| MsG0280007506.01 | MsG0680035888.01 | 0.847791 | 9.247209e-60 | 1.662165e-56 |
| MsG0280007506.01 | MsG0780035979.01 | 0.821619 | 3.666127e-53 | 2.997708e-50 |
| MsG0280007506.01 | MsG0780036147.01 | 0.823187 | 1.585256e-53 | 1.355317e-50 |
| MsG0280007506.01 | MsG0780036297.01 | 0.804456 | 2.141901e-49 | 1.104862e-46 |
| MsG0280007506.01 | MsG0780036757.01 | 0.823170 | 1.600052e-53 | 1.367307e-50 |
| MsG0280007506.01 | MsG0780036815.01 | 0.835915 | 1.270677e-56 | 1.576226e-53 |
| MsG0280007506.01 | MsG0780037093.01 | 0.809258 | 2.068196e-50 | 1.208500e-47 |
| MsG0280007506.01 | MsG0780037141.01 | 0.815503 | 8.943665e-52 | 6.177457e-49 |
| MsG0280007506.01 | MsG0780037240.01 | 0.830224 | 3.313234e-55 | 3.469425e-52 |
| MsG0280007506.01 | MsG0780038424.01 | 0.811679 | 6.205205e-51 | 3.865300e-48 |
| MsG0280007506.01 | MsG0780038603.01 | 0.808534 | 2.954515e-50 | 1.693564e-47 |
| MsG0280007506.01 | MsG0780039170.01 | 0.825536 | 4.443389e-54 | 4.061339e-51 |
| MsG0280007506.01 | MsG0780039443.01 | 0.827493 | 1.517509e-54 | 1.467367e-51 |
| MsG0280007506.01 | MsG0780040286.01 | 0.826523 | 2.589746e-54 | 2.434481e-51 |
| MsG0280007506.01 | MsG0780040287.01 | 0.827983 | 1.157538e-54 | 1.135456e-51 |
| MsG0280007506.01 | MsG0780040430.01 | 0.807493 | 4.919911e-50 | 2.744329e-47 |
| MsG0280007506.01 | MsG0780040529.01 | 0.811380 | 7.208515e-51 | 4.455164e-48 |
| MsG0280007506.01 | MsG0780040834.01 | 0.811059 | 8.458217e-51 | 5.183831e-48 |
| MsG0280007506.01 | MsG0780040841.01 | 0.815193 | 1.047900e-51 | 7.175981e-49 |
| MsG0280007506.01 | MsG0780040846.01 | 0.850035 | 2.202408e-60 | 4.257952e-57 |
| MsG0280007506.01 | MsG0780041083.01 | 0.838398 | 2.945287e-57 | 3.939990e-54 |
| MsG0280007506.01 | MsG0780041259.01 | 0.861179 | 1.230693e-63 | 3.451208e-60 |
| MsG0280007506.01 | MsG0780041391.01 | 0.800483 | 1.410871e-48 | 6.576925e-46 |
| MsG0280007506.01 | MsG0780041440.01 | 0.812782 | 3.566033e-51 | 2.287825e-48 |
| MsG0280007506.01 | MsG0780041448.01 | 0.815516 | 8.883140e-52 | 6.137866e-49 |
| MsG0280007506.01 | MsG0780041462.01 | 0.805496 | 1.298233e-49 | 6.878382e-47 |
| MsG0280007506.01 | MsG0780041584.01 | 0.808407 | 3.144573e-50 | 1.796579e-47 |
| MsG0280007506.01 | MsG0780041698.01 | 0.837030 | 6.608803e-57 | 8.478428e-54 |
| MsG0280007506.01 | MsG0780041699.01 | 0.854172 | 1.469012e-61 | 3.252821e-58 |
| MsG0280007506.01 | MsG0880042380.01 | 0.815548 | 8.735612e-52 | 6.041032e-49 |
| MsG0280007506.01 | MsG0880043034.01 | 0.806105 | 9.666799e-50 | 5.202541e-47 |
| MsG0280007506.01 | MsG0880044782.01 | 0.828317 | 9.615512e-55 | 9.523329e-52 |
| MsG0280007506.01 | MsG0880045145.01 | 0.829345 | 5.421547e-55 | 5.534442e-52 |
| MsG0280007506.01 | MsG0880045294.01 | 0.807530 | 4.833616e-50 | 2.698668e-47 |
| MsG0280007506.01 | MsG0880045483.01 | 0.821842 | 3.255928e-53 | 2.679395e-50 |
| MsG0280007506.01 | MsG0880045506.01 | 0.815349 | 9.677504e-52 | 6.655801e-49 |
| MsG0280007506.01 | MsG0880045965.01 | 0.819604 | 1.064407e-52 | 8.228647e-50 |
| MsG0280007506.01 | MsG0880046284.01 | 0.813867 | 2.059612e-51 | 1.360735e-48 |
| MsG0280007506.01 | MsG0880046457.01 | 0.819338 | 1.223939e-52 | 9.391303e-50 |
| MsG0280007506.01 | MsG0880047470.01 | 0.802298 | 5.994185e-49 | 2.925969e-46 |
| MsG0280007506.01 | MsG0880047472.01 | 0.847240 | 1.310743e-59 | 2.315063e-56 |
| MsG0280007506.01 | MsG0880047473.01 | 0.852155 | 5.557606e-61 | 1.150894e-57 |
| MsG0280007506.01 | MsG0880047764.01 | 0.820800 | 5.663450e-53 | 4.526458e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007506.01.T01 | MTR_2g026685 | 81.287 | 171 | 17 | 1 | 1 | 171 | 1 | 156 | 2.28e-76 | 231 |
| MsG0280007506.01.T01 | MTR_2g026685 | 81.287 | 171 | 17 | 1 | 1 | 171 | 41 | 196 | 1.48e-75 | 231 |
| MsG0280007506.01.T01 | MTR_2g026685 | 81.287 | 171 | 17 | 1 | 1 | 171 | 42 | 197 | 1.52e-75 | 231 |
| MsG0280007506.01.T01 | MTR_8g096700 | 49.708 | 171 | 73 | 1 | 1 | 171 | 59 | 216 | 1.92e-44 | 152 |
| MsG0280007506.01.T01 | MTR_3g099040 | 51.149 | 174 | 69 | 1 | 1 | 174 | 42 | 199 | 1.47e-43 | 149 |
| MsG0280007506.01.T01 | MTR_3g099030 | 49.412 | 170 | 69 | 2 | 1 | 170 | 42 | 194 | 8.29e-40 | 139 |
| MsG0280007506.01.T01 | MTR_3g435930 | 38.021 | 192 | 94 | 2 | 1 | 191 | 34 | 201 | 1.48e-30 | 114 |
| MsG0280007506.01.T01 | MTR_4g006650 | 48.092 | 131 | 52 | 1 | 1 | 131 | 175 | 289 | 2.66e-25 | 102 |
| MsG0280007506.01.T01 | MTR_7g101930 | 37.712 | 236 | 126 | 6 | 1 | 226 | 21 | 245 | 2.97e-23 | 97.1 |
| MsG0280007506.01.T01 | MTR_0041s0140 | 37.712 | 236 | 126 | 6 | 1 | 226 | 21 | 245 | 3.74e-23 | 95.1 |
| MsG0280007506.01.T01 | MTR_4g057765 | 36.723 | 177 | 85 | 3 | 1 | 172 | 74 | 228 | 7.68e-23 | 95.5 |
| MsG0280007506.01.T01 | MTR_2g095480 | 35.673 | 171 | 92 | 3 | 1 | 171 | 73 | 225 | 1.18e-22 | 95.1 |
| MsG0280007506.01.T01 | MTR_3g093020 | 36.257 | 171 | 84 | 3 | 1 | 171 | 44 | 189 | 1.27e-21 | 91.7 |
| MsG0280007506.01.T01 | MTR_5g069180 | 30.409 | 171 | 94 | 3 | 1 | 171 | 61 | 206 | 7.46e-21 | 90.1 |
| MsG0280007506.01.T01 | MTR_8g010540 | 34.857 | 175 | 83 | 3 | 1 | 171 | 37 | 184 | 8.17e-20 | 86.3 |
| MsG0280007506.01.T01 | MTR_1g063210 | 35.088 | 171 | 109 | 2 | 1 | 171 | 32 | 200 | 6.80e-17 | 79.3 |
| MsG0280007506.01.T01 | MTR_8g018747 | 41.176 | 68 | 40 | 0 | 104 | 171 | 17 | 84 | 6.06e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007506.01.T01 | AT5G50740 | 49.425 | 174 | 72 | 1 | 1 | 174 | 35 | 192 | 4.63e-47 | 158 |
| MsG0280007506.01.T01 | AT5G50740 | 49.425 | 174 | 72 | 1 | 1 | 174 | 35 | 192 | 4.63e-47 | 158 |
| MsG0280007506.01.T01 | AT5G50740 | 49.425 | 174 | 72 | 1 | 1 | 174 | 42 | 199 | 6.07e-47 | 158 |
| MsG0280007506.01.T01 | AT5G63530 | 51.163 | 172 | 69 | 1 | 1 | 172 | 66 | 222 | 3.20e-36 | 131 |
| MsG0280007506.01.T01 | AT5G63530 | 51.163 | 172 | 69 | 1 | 1 | 172 | 81 | 237 | 5.52e-36 | 131 |
| MsG0280007506.01.T01 | AT3G02960 | 35.838 | 173 | 88 | 1 | 1 | 173 | 44 | 193 | 8.63e-34 | 122 |
| MsG0280007506.01.T01 | AT5G50740 | 49.242 | 132 | 51 | 1 | 1 | 132 | 35 | 150 | 1.41e-33 | 119 |
| MsG0280007506.01.T01 | AT5G50740 | 49.242 | 132 | 51 | 1 | 1 | 132 | 42 | 157 | 2.44e-33 | 119 |
| MsG0280007506.01.T01 | AT5G24580 | 31.844 | 179 | 98 | 2 | 1 | 179 | 63 | 217 | 1.63e-22 | 94.7 |
| MsG0280007506.01.T01 | AT5G24580 | 31.844 | 179 | 98 | 2 | 1 | 179 | 64 | 218 | 1.73e-22 | 94.7 |
| MsG0280007506.01.T01 | AT5G24580 | 31.844 | 179 | 98 | 2 | 1 | 179 | 64 | 218 | 1.73e-22 | 94.7 |
| MsG0280007506.01.T01 | AT2G36950 | 34.956 | 226 | 135 | 4 | 1 | 223 | 58 | 274 | 4.30e-19 | 85.9 |
| MsG0280007506.01.T01 | AT5G24580 | 30.168 | 179 | 98 | 3 | 1 | 179 | 64 | 215 | 1.19e-18 | 84.0 |
| MsG0280007506.01.T01 | AT5G60800 | 34.270 | 178 | 111 | 2 | 1 | 178 | 34 | 205 | 1.01e-16 | 78.6 |
| MsG0280007506.01.T01 | AT5G60800 | 34.270 | 178 | 111 | 2 | 1 | 178 | 34 | 205 | 1.09e-16 | 78.2 |
| MsG0280007506.01.T01 | AT1G29000 | 34.302 | 172 | 96 | 4 | 1 | 171 | 23 | 178 | 4.20e-16 | 76.6 |
| MsG0280007506.01.T01 | AT1G29000 | 34.302 | 172 | 96 | 4 | 1 | 171 | 23 | 178 | 4.20e-16 | 76.6 |
| MsG0280007506.01.T01 | AT5G03380 | 32.105 | 190 | 97 | 4 | 1 | 164 | 5 | 188 | 1.29e-15 | 75.9 |
| MsG0280007506.01.T01 | AT5G03380 | 32.105 | 190 | 97 | 4 | 1 | 164 | 32 | 215 | 1.66e-15 | 75.9 |
| MsG0280007506.01.T01 | AT5G24580 | 30.519 | 154 | 83 | 2 | 26 | 179 | 2 | 131 | 3.49e-15 | 73.2 |
| MsG0280007506.01.T01 | AT2G28090 | 30.636 | 173 | 100 | 2 | 1 | 173 | 37 | 189 | 2.20e-11 | 62.8 |
Find 48 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGTAGTATTACTGAATTT+TGG | 0.272542 | 2:+16399460 | MsG0280007506.01.T01:three_prime_UTR |
| ACCAAAGCCAGAGGAGAAAA+AGG | 0.277970 | 2:+16396367 | MsG0280007506.01.T01:CDS |
| AAACGTATCCGTAAGATTAA+AGG | 0.281091 | 2:+16398228 | MsG0280007506.01.T01:CDS |
| AGAATCAGTGGAAACAGATT+TGG | 0.303796 | 2:+16398887 | MsG0280007506.01.T01:CDS |
| AATGATCAAGCCATAGTAAA+AGG | 0.311623 | 2:+16398912 | MsG0280007506.01.T01:CDS |
| TTGCACTAACGTTACCCTTT+TGG | 0.315811 | 2:+16397047 | MsG0280007506.01.T01:CDS |
| ACTTCATCAACAAGCTTTGC+TGG | 0.318902 | 2:-16398945 | None:intergenic |
| AAATCAAACGTAGTGAATAT+TGG | 0.336929 | 2:+16399125 | MsG0280007506.01.T01:CDS |
| TACATAACAGAACAAGCATT+TGG | 0.386302 | 2:-16399205 | None:intergenic |
| AGAAGAAAGAAGAGGAGAAA+AGG | 0.388616 | 2:+16399027 | MsG0280007506.01.T01:CDS |
| AAGATAGTGCAAATTATAAC+TGG | 0.395185 | 2:-16399230 | None:intergenic |
| CTTTAGTTGTTGTGTTTATG+AGG | 0.399470 | 2:+16399372 | MsG0280007506.01.T01:three_prime_UTR |
| CTATACTATGTTACATTACA+TGG | 0.413204 | 2:-16399293 | None:intergenic |
| GGAGGTGACCGCAGATAGTA+AGG | 0.417983 | 2:+16396200 | MsG0280007506.01.T01:CDS |
| TAAGTGATTCTGCCATCTTT+TGG | 0.418357 | 2:-16399413 | None:intergenic |
| TCTTTGTACCTTTAATCTTA+CGG | 0.421997 | 2:-16398236 | None:intergenic |
| GAATCAGTGGAAACAGATTT+GGG | 0.429156 | 2:+16398888 | MsG0280007506.01.T01:CDS |
| AGGGTAACGTTAGTGCAAAT+TGG | 0.432734 | 2:-16397042 | None:intergenic |
| AAAGAAAAGTGGTAAGAAAG+TGG | 0.444575 | 2:+16396284 | MsG0280007506.01.T01:CDS |
| GAAAAGGAAGAAGTCAAAGA+AGG | 0.460434 | 2:+16399043 | MsG0280007506.01.T01:CDS |
| TGTGAAGGAGGAAGAAAAGA+AGG | 0.465697 | 2:+16398998 | MsG0280007506.01.T01:CDS |
| TGTATTTCACTGCCAAAAGA+TGG | 0.468290 | 2:+16399401 | MsG0280007506.01.T01:three_prime_UTR |
| TTCTCATCACTGAAAATCTC+AGG | 0.471345 | 2:-16399181 | None:intergenic |
| ATGGCATTCTATGAAGTTGT+TGG | 0.488989 | 2:+16399346 | MsG0280007506.01.T01:three_prime_UTR |
| GAAAGTGAAGAAGAAAACAA+AGG | 0.495745 | 2:+16399079 | MsG0280007506.01.T01:CDS |
| AAAGCATTGAAAGGATTTGA+AGG | 0.510804 | 2:+16395350 | MsG0280007506.01.T01:CDS |
| AAAGGCAGCAGACCCCATAA+AGG | 0.514781 | 2:+16396245 | MsG0280007506.01.T01:CDS |
| ACCTTTGCCAAAACCTCAAG+AGG | 0.515408 | 2:+16396317 | MsG0280007506.01.T01:CDS |
| AGAACTATTGTTACCACAGG+TGG | 0.515740 | 2:-16398162 | None:intergenic |
| AAAGTTGCAAAAGCATTGAA+AGG | 0.535218 | 2:+16395341 | MsG0280007506.01.T01:CDS |
| TTGAGAACTATTGTTACCAC+AGG | 0.539096 | 2:-16398165 | None:intergenic |
| GGAAGAAGAGAAGAAAGAAG+AGG | 0.545102 | 2:+16399019 | MsG0280007506.01.T01:CDS |
| AAAAGACTACAAAAGAAAAG+TGG | 0.555223 | 2:+16396273 | MsG0280007506.01.T01:CDS |
| ATAGAAACAAGTTACCAAAA+GGG | 0.575656 | 2:-16397061 | None:intergenic |
| GCAAGCTTCTATTGTGAAGG+AGG | 0.578314 | 2:+16398986 | MsG0280007506.01.T01:CDS |
| AAAGCAAGCTTCTATTGTGA+AGG | 0.586936 | 2:+16398983 | MsG0280007506.01.T01:CDS |
| TTGTTGATGAAGTGTTCAAG+AGG | 0.592575 | 2:+16398955 | MsG0280007506.01.T01:CDS |
| GTGTGTGAAAGGAGTGGAGG+AGG | 0.602247 | 2:+16396182 | MsG0280007506.01.T01:intron |
| GGCAGCAAAGTGGTAGTGAA+AGG | 0.606418 | 2:+16396222 | MsG0280007506.01.T01:CDS |
| ACTATTGTTACCACAGGTGG+AGG | 0.612633 | 2:-16398159 | None:intergenic |
| AGATAGTAAGGGCAGCAAAG+TGG | 0.627174 | 2:+16396212 | MsG0280007506.01.T01:CDS |
| TTTGCTGCCCTTACTATCTG+CGG | 0.627410 | 2:-16396208 | None:intergenic |
| ATATGCAGGAGTAGAATCAG+TGG | 0.635889 | 2:+16398875 | MsG0280007506.01.T01:intron |
| TGCATTGTGAAGCTTGTGCA+AGG | 0.638724 | 2:+16395318 | MsG0280007506.01.T01:CDS |
| GAGGTGACCGCAGATAGTAA+GGG | 0.644356 | 2:+16396201 | MsG0280007506.01.T01:CDS |
| CAAAGTGGTAGTGAAAGGAA+AGG | 0.648004 | 2:+16396227 | MsG0280007506.01.T01:CDS |
| TAAAGAAGAACCAAAGCCAG+AGG | 0.659557 | 2:+16396358 | MsG0280007506.01.T01:CDS |
| GTTGTGTGTGAAAGGAGTGG+AGG | 0.667974 | 2:+16396179 | MsG0280007506.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATTAATAATGAATAAATTA+AGG | + | Chr2:16397725-16397744 | MsG0280007506.01.T01:intron | 10.0% |
| !! | TTATAAATATATATACACTT+TGG | - | Chr2:16396426-16396445 | None:intergenic | 10.0% |
| !!! | CATTTTTCATAAAAAAATAA+AGG | + | Chr2:16396092-16396111 | MsG0280007506.01.T01:intron | 10.0% |
| !!! | GAAATAATAAATGATTTTTA+TGG | + | Chr2:16397568-16397587 | MsG0280007506.01.T01:intron | 10.0% |
| !! | ATTTCACACAAAAAAAAATT+AGG | + | Chr2:16397701-16397720 | MsG0280007506.01.T01:intron | 15.0% |
| !! | TTATATTTATCTTTGACAAA+CGG | - | Chr2:16396842-16396861 | None:intergenic | 15.0% |
| !!! | AAATATGAAATAGTTTTGAA+TGG | + | Chr2:16397010-16397029 | MsG0280007506.01.T01:intron | 15.0% |
| !!! | AAATTTTGAAATTGTTTGTA+TGG | + | Chr2:16396600-16396619 | MsG0280007506.01.T01:intron | 15.0% |
| !!! | AATATGTACATTATTTTTTG+AGG | - | Chr2:16395678-16395697 | None:intergenic | 15.0% |
| !!! | TATAAAATTCTAACTTTTAC+AGG | + | Chr2:16395843-16395862 | MsG0280007506.01.T01:intron | 15.0% |
| !!! | TGATCAAATAATTGATATTT+TGG | + | Chr2:16398099-16398118 | MsG0280007506.01.T01:intron | 15.0% |
| !! | AAATGTGACAAACAATTTAA+TGG | - | Chr2:16397685-16397704 | None:intergenic | 20.0% |
| !! | AAGTAATATGTACTACATTA+TGG | - | Chr2:16395654-16395673 | None:intergenic | 20.0% |
| !! | AAGTTGTCTAATTAATCTAA+TGG | - | Chr2:16396797-16396816 | None:intergenic | 20.0% |
| !! | ATTAATGTGCTTTATCTAAA+AGG | - | Chr2:16398478-16398497 | None:intergenic | 20.0% |
| !! | GAATAAATTAAGGTGAAATT+AGG | + | Chr2:16397735-16397754 | MsG0280007506.01.T01:intron | 20.0% |
| !! | GATTTATTAGATTATTGTCT+TGG | - | Chr2:16395454-16395473 | None:intergenic | 20.0% |
| !! | GTGTTAATAATAATATATGC+AGG | + | Chr2:16398861-16398880 | MsG0280007506.01.T01:intron | 20.0% |
| !! | GTTTAAATAACATGCAATAT+CGG | + | Chr2:16396508-16396527 | MsG0280007506.01.T01:intron | 20.0% |
| !! | TCAAATTATGTTTATTTCAG+TGG | - | Chr2:16398811-16398830 | None:intergenic | 20.0% |
| !! | TCATAAAAAAATAAAGGTCT+AGG | + | Chr2:16396098-16396117 | MsG0280007506.01.T01:intron | 20.0% |
| !! | TGGGTTAAAAGTTAAATATA+TGG | + | Chr2:16397471-16397490 | MsG0280007506.01.T01:intron | 20.0% |
| !! | TGTAATGTAATAAAATTGAG+AGG | + | Chr2:16397335-16397354 | MsG0280007506.01.T01:intron | 20.0% |
| !! | TTATAAAGATAGGAGTTTAT+AGG | - | Chr2:16398766-16398785 | None:intergenic | 20.0% |
| !!! | CTCAATTTTATTACATTACA+GGG | - | Chr2:16397335-16397354 | None:intergenic | 20.0% |
| !!! | TAAATTTTGCACACATTAAA+AGG | - | Chr2:16396691-16396710 | None:intergenic | 20.0% |
| !!! | TATTTTGGATTCTTATCATA+TGG | + | Chr2:16398114-16398133 | MsG0280007506.01.T01:intron | 20.0% |
| !!! | TCTCAATTTTATTACATTAC+AGG | - | Chr2:16397336-16397355 | None:intergenic | 20.0% |
| !!! | TTAAGAATTTTAGCTTTGTA+TGG | + | Chr2:16399327-16399346 | MsG0280007506.01.T01:three_prime_UTR | 20.0% |
| !!! | TTATTATTTCTGTTTGCAAA+GGG | - | Chr2:16397558-16397577 | None:intergenic | 20.0% |
| !!! | TTTATTATTTCTGTTTGCAA+AGG | - | Chr2:16397559-16397578 | None:intergenic | 20.0% |
| !!! | TTTGTATTTTAGTAGCTTAT+TGG | + | Chr2:16399251-16399270 | MsG0280007506.01.T01:exon | 20.0% |
| ! | AAAAAAATAAAGGTCTAGGT+GGG | + | Chr2:16396102-16396121 | MsG0280007506.01.T01:intron | 25.0% |
| ! | AAAAGACTACAAAAGAAAAG+TGG | + | Chr2:16396273-16396292 | MsG0280007506.01.T01:CDS | 25.0% |
| ! | AAATCAAACGTAGTGAATAT+TGG | + | Chr2:16399125-16399144 | MsG0280007506.01.T01:CDS | 25.0% |
| ! | AACGATCACATTATAAAGAT+AGG | - | Chr2:16398776-16398795 | None:intergenic | 25.0% |
| ! | AAGATAGTGCAAATTATAAC+TGG | - | Chr2:16399233-16399252 | None:intergenic | 25.0% |
| ! | AATATGTACTACATTATGGT+TGG | - | Chr2:16395650-16395669 | None:intergenic | 25.0% |
| ! | ATAGAAACAAGTTACCAAAA+GGG | - | Chr2:16397064-16397083 | None:intergenic | 25.0% |
| ! | ATGTAATTAAGGAGTTATGT+AGG | - | Chr2:16397782-16397801 | None:intergenic | 25.0% |
| ! | CTATACTATGTTACATTACA+TGG | - | Chr2:16399296-16399315 | None:intergenic | 25.0% |
| ! | TAAAAAAATAAAGGTCTAGG+TGG | + | Chr2:16396101-16396120 | MsG0280007506.01.T01:intron | 25.0% |
| ! | TAAACCATATATGTGTCTAT+AGG | - | Chr2:16398030-16398049 | None:intergenic | 25.0% |
| ! | TCTTTGTACCTTTAATCTTA+CGG | - | Chr2:16398239-16398258 | None:intergenic | 25.0% |
| ! | TGCATTTCATACATGTTATT+TGG | - | Chr2:16396976-16396995 | None:intergenic | 25.0% |
| ! | TTGTGAAAATTGAAACTAGT+TGG | + | Chr2:16397632-16397651 | MsG0280007506.01.T01:intron | 25.0% |
| !! | AATTTTATTACATTACAGGG+TGG | - | Chr2:16397332-16397351 | None:intergenic | 25.0% |
| !! | AGGTAAATTTTATACACGAT+AGG | + | Chr2:16395863-16395882 | MsG0280007506.01.T01:intron | 25.0% |
| !! | ATGATTTTTATGGTCCATTT+TGG | + | Chr2:16397578-16397597 | MsG0280007506.01.T01:intron | 25.0% |
| !! | CAAAAGTATAGCAACAAATT+GGG | - | Chr2:16397878-16397897 | None:intergenic | 25.0% |
| !! | GTAGTAGTATTACTGAATTT+TGG | + | Chr2:16399460-16399479 | MsG0280007506.01.T01:three_prime_UTR | 25.0% |
| !! | TCAAAAGTATAGCAACAAAT+TGG | - | Chr2:16397879-16397898 | None:intergenic | 25.0% |
| !!! | TATTATTTCTGTTTGCAAAG+GGG | - | Chr2:16397557-16397576 | None:intergenic | 25.0% |
| AAAAAATAAAGGTCTAGGTG+GGG | + | Chr2:16396103-16396122 | MsG0280007506.01.T01:intron | 30.0% | |
| AAACGTATCCGTAAGATTAA+AGG | + | Chr2:16398228-16398247 | MsG0280007506.01.T01:CDS | 30.0% | |
| AAAGAAAAGTGGTAAGAAAG+TGG | + | Chr2:16396284-16396303 | MsG0280007506.01.T01:CDS | 30.0% | |
| AAGTAAAACATTATGTGACG+TGG | + | Chr2:16397451-16397470 | MsG0280007506.01.T01:intron | 30.0% | |
| AATACCAACAAGATTGAAAG+AGG | - | Chr2:16398268-16398287 | None:intergenic | 30.0% | |
| AATGATCAAGCCATAGTAAA+AGG | + | Chr2:16398912-16398931 | MsG0280007506.01.T01:CDS | 30.0% | |
| AGTAAAACATTATGTGACGT+GGG | + | Chr2:16397452-16397471 | MsG0280007506.01.T01:intron | 30.0% | |
| ATGTGCTTTATCTAAAAGGA+TGG | - | Chr2:16398474-16398493 | None:intergenic | 30.0% | |
| ATTAAAAGGACATGCACTAT+CGG | - | Chr2:16396677-16396696 | None:intergenic | 30.0% | |
| CACAAGTAGTTATGATAAGA+AGG | - | Chr2:16396466-16396485 | None:intergenic | 30.0% | |
| CATAGAAACAAGTTACCAAA+AGG | - | Chr2:16397065-16397084 | None:intergenic | 30.0% | |
| CTTTAGTTGTTGTGTTTATG+AGG | + | Chr2:16399372-16399391 | MsG0280007506.01.T01:three_prime_UTR | 30.0% | |
| GAAAGTGAAGAAGAAAACAA+AGG | + | Chr2:16399079-16399098 | MsG0280007506.01.T01:CDS | 30.0% | |
| GTCGATAATTTATTGGATGA+GGG | + | Chr2:16397503-16397522 | MsG0280007506.01.T01:intron | 30.0% | |
| GTGAAATTCAAAAGCAATCA+TGG | - | Chr2:16395791-16395810 | None:intergenic | 30.0% | |
| TAACTCCTTAATTACATGCT+CGG | + | Chr2:16397785-16397804 | MsG0280007506.01.T01:intron | 30.0% | |
| TAAGTTGTCTAATGATCTCA+TGG | - | Chr2:16398573-16398592 | None:intergenic | 30.0% | |
| TACATAACAGAACAAGCATT+TGG | - | Chr2:16399208-16399227 | None:intergenic | 30.0% | |
| TATATGTAATGTGTGTGACA+TGG | + | Chr2:16397391-16397410 | MsG0280007506.01.T01:intron | 30.0% | |
| TGACAATGGATCATACAAAT+TGG | - | Chr2:16395705-16395724 | None:intergenic | 30.0% | |
| TGTCGATAATTTATTGGATG+AGG | + | Chr2:16397502-16397521 | MsG0280007506.01.T01:intron | 30.0% | |
| TTACAGTGTCATGAAGAAAA+TGG | + | Chr2:16398374-16398393 | MsG0280007506.01.T01:intron | 30.0% | |
| TTGAAAATGTTGTGTGTGAA+AGG | + | Chr2:16396171-16396190 | MsG0280007506.01.T01:intron | 30.0% | |
| TTGTGCTGTCGATAATTTAT+TGG | + | Chr2:16397496-16397515 | MsG0280007506.01.T01:intron | 30.0% | |
| ! | ATCAATCACTCCTTTTACTA+TGG | - | Chr2:16398925-16398944 | None:intergenic | 30.0% |
| ! | GTTGCTATACTTTTGAATCA+CGG | + | Chr2:16397883-16397902 | MsG0280007506.01.T01:intron | 30.0% |
| ! | TAGTCAACATAGTCTTTTGA+TGG | - | Chr2:16399151-16399170 | None:intergenic | 30.0% |
| ! | TTTTGTTAACGAGTGTCTTA+AGG | + | Chr2:16395930-16395949 | MsG0280007506.01.T01:intron | 30.0% |
| !! | AAAGCATTGAAAGGATTTGA+AGG | + | Chr2:16395350-16395369 | MsG0280007506.01.T01:CDS | 30.0% |
| !! | AAAGTTGCAAAAGCATTGAA+AGG | + | Chr2:16395341-16395360 | MsG0280007506.01.T01:CDS | 30.0% |
| !!! | CTTTTGGTAACTTGTTTCTA+TGG | + | Chr2:16397063-16397082 | MsG0280007506.01.T01:intron | 30.0% |
| AAAGCAAGCTTCTATTGTGA+AGG | + | Chr2:16398983-16399002 | MsG0280007506.01.T01:CDS | 35.0% | |
| AACTAGTTGGAGAACTTTAG+AGG | + | Chr2:16397645-16397664 | MsG0280007506.01.T01:intron | 35.0% | |
| AAGACTGTGACAATTAAGAG+AGG | + | Chr2:16397191-16397210 | MsG0280007506.01.T01:intron | 35.0% | |
| AAGTTGCACAAAAGGATAGT+GGG | - | Chr2:16397224-16397243 | None:intergenic | 35.0% | |
| AATCAAGTTCCAATGAATGG+GGG | + | Chr2:16396932-16396951 | MsG0280007506.01.T01:intron | 35.0% | |
| ACGAATCAAGTTCCAATGAA+TGG | + | Chr2:16396929-16396948 | MsG0280007506.01.T01:intron | 35.0% | |
| ACTTAAAGAGTGAAACGATG+TGG | - | Chr2:16396580-16396599 | None:intergenic | 35.0% | |
| AGAAGAAAGAAGAGGAGAAA+AGG | + | Chr2:16399027-16399046 | MsG0280007506.01.T01:CDS | 35.0% | |
| AGAATCAGTGGAAACAGATT+TGG | + | Chr2:16398887-16398906 | MsG0280007506.01.T01:CDS | 35.0% | |
| ATCCCTCTAACAAGGAAAAA+AGG | - | Chr2:16395759-16395778 | None:intergenic | 35.0% | |
| ATGGCATTCTATGAAGTTGT+TGG | + | Chr2:16399346-16399365 | MsG0280007506.01.T01:three_prime_UTR | 35.0% | |
| CAACAAGATTGAAAGAGGAA+AGG | - | Chr2:16398263-16398282 | None:intergenic | 35.0% | |
| CAACTATCTAACTTCTTGCA+TGG | + | Chr2:16398708-16398727 | MsG0280007506.01.T01:intron | 35.0% | |
| CAATAATGTCCCTACCATAA+AGG | + | Chr2:16397151-16397170 | MsG0280007506.01.T01:intron | 35.0% | |
| CACAACCGTTTGATCTTAAT+CGG | - | Chr2:16396870-16396889 | None:intergenic | 35.0% | |
| CACTCCTATAGACACATATA+TGG | + | Chr2:16398023-16398042 | MsG0280007506.01.T01:intron | 35.0% | |
| CATGTCTATTGCTAAGATCA+CGG | - | Chr2:16397846-16397865 | None:intergenic | 35.0% | |
| CGAATCAAGTTCCAATGAAT+GGG | + | Chr2:16396930-16396949 | MsG0280007506.01.T01:intron | 35.0% | |
| CTCTAACAAGGAAAAAAGGA+GGG | - | Chr2:16395755-16395774 | None:intergenic | 35.0% | |
| CTTCTATCTAACTTCTTGCA+TGG | + | Chr2:16398660-16398679 | MsG0280007506.01.T01:intron | 35.0% | |
| CTTTCCTCTTTCAATCTTGT+TGG | + | Chr2:16398261-16398280 | MsG0280007506.01.T01:intron | 35.0% | |
| GAAAAGGAAGAAGTCAAAGA+AGG | + | Chr2:16399043-16399062 | MsG0280007506.01.T01:CDS | 35.0% | |
| GAATCAAGTTCCAATGAATG+GGG | + | Chr2:16396931-16396950 | MsG0280007506.01.T01:intron | 35.0% | |
| GAATCAGTGGAAACAGATTT+GGG | + | Chr2:16398888-16398907 | MsG0280007506.01.T01:CDS | 35.0% | |
| TAATTTATTGGATGAGGGTG+AGG | + | Chr2:16397508-16397527 | MsG0280007506.01.T01:intron | 35.0% | |
| TCAATCCGAGCATGTAATTA+AGG | - | Chr2:16397793-16397812 | None:intergenic | 35.0% | |
| TGCAAGAAGTTAGATAGAAG+TGG | - | Chr2:16398660-16398679 | None:intergenic | 35.0% | |
| TGTATGGCGTGGTAAAATAA+GGG | + | Chr2:16396616-16396635 | MsG0280007506.01.T01:intron | 35.0% | |
| TGTATTTCACTGCCAAAAGA+TGG | + | Chr2:16399401-16399420 | MsG0280007506.01.T01:three_prime_UTR | 35.0% | |
| TTACATGTGCCTTTATGGTA+GGG | - | Chr2:16397163-16397182 | None:intergenic | 35.0% | |
| TTCTCATCACTGAAAATCTC+AGG | - | Chr2:16399184-16399203 | None:intergenic | 35.0% | |
| TTGAAATTGTTTGTATGGCG+TGG | + | Chr2:16396605-16396624 | MsG0280007506.01.T01:intron | 35.0% | |
| TTGAGAACTATTGTTACCAC+AGG | - | Chr2:16398168-16398187 | None:intergenic | 35.0% | |
| TTGTATGGCGTGGTAAAATA+AGG | + | Chr2:16396615-16396634 | MsG0280007506.01.T01:intron | 35.0% | |
| TTGTGTAACTTTGTGAGTGT+AGG | + | Chr2:16396891-16396910 | MsG0280007506.01.T01:intron | 35.0% | |
| ! | AGTCTTTTGAGCACCTTTAT+GGG | - | Chr2:16396261-16396280 | None:intergenic | 35.0% |
| ! | TAAGTGATTCTGCCATCTTT+TGG | - | Chr2:16399416-16399435 | None:intergenic | 35.0% |
| ! | TAGTCTTTTGAGCACCTTTA+TGG | - | Chr2:16396262-16396281 | None:intergenic | 35.0% |
| ! | TGACAAACGGATTCAAAACA+GGG | - | Chr2:16396829-16396848 | None:intergenic | 35.0% |
| ! | TTCTTCTTTTTCTCCTCTTG+AGG | - | Chr2:16396333-16396352 | None:intergenic | 35.0% |
| ! | TTGACAAACGGATTCAAAAC+AGG | - | Chr2:16396830-16396849 | None:intergenic | 35.0% |
| ! | TTGTTGATGAAGTGTTCAAG+AGG | + | Chr2:16398955-16398974 | MsG0280007506.01.T01:CDS | 35.0% |
| ! | TTTTTCTCCTCTTGAGGTTT+TGG | - | Chr2:16396327-16396346 | None:intergenic | 35.0% |
| !! | ACAAAAGTACTAGCTGACAA+TGG | - | Chr2:16395719-16395738 | None:intergenic | 35.0% |
| !! | ACTTGTTTCTATGGATTGGA+TGG | + | Chr2:16397072-16397091 | MsG0280007506.01.T01:intron | 35.0% |
| !! | CATCTTTGATTTGCATCGAA+CGG | + | Chr2:16398598-16398617 | MsG0280007506.01.T01:intron | 35.0% |
| !! | GGTAACTTGTTTCTATGGAT+TGG | + | Chr2:16397068-16397087 | MsG0280007506.01.T01:intron | 35.0% |
| !! | TATGTGTCTATAGGAGTGTT+TGG | - | Chr2:16398021-16398040 | None:intergenic | 35.0% |
| !!! | CTCCTTTTTTCCTTGTTAGA+GGG | + | Chr2:16395754-16395773 | MsG0280007506.01.T01:intron | 35.0% |
| AATGTTGTGTGTGAAAGGAG+TGG | + | Chr2:16396176-16396195 | MsG0280007506.01.T01:intron | 40.0% | |
| ACTTCATCAACAAGCTTTGC+TGG | - | Chr2:16398948-16398967 | None:intergenic | 40.0% | |
| AGAACTATTGTTACCACAGG+TGG | - | Chr2:16398165-16398184 | None:intergenic | 40.0% | |
| AGGGTAACGTTAGTGCAAAT+TGG | - | Chr2:16397045-16397064 | None:intergenic | 40.0% | |
| AGTTGCACAAAAGGATAGTG+GGG | - | Chr2:16397223-16397242 | None:intergenic | 40.0% | |
| ATATGCAGGAGTAGAATCAG+TGG | + | Chr2:16398875-16398894 | MsG0280007506.01.T01:intron | 40.0% | |
| CAAGTTGCACAAAAGGATAG+TGG | - | Chr2:16397225-16397244 | None:intergenic | 40.0% | |
| CCTCTAACAAGGAAAAAAGG+AGG | - | Chr2:16395756-16395775 | None:intergenic | 40.0% | |
| CGTGATCTTAGCAATAGACA+TGG | + | Chr2:16397844-16397863 | MsG0280007506.01.T01:intron | 40.0% | |
| CTGTGTGCAACTACATAATG+TGG | - | Chr2:16398537-16398556 | None:intergenic | 40.0% | |
| GGAAGAAGAGAAGAAAGAAG+AGG | + | Chr2:16399019-16399038 | MsG0280007506.01.T01:CDS | 40.0% | |
| GTCGTCCGATTAAGATCAAA+CGG | + | Chr2:16396862-16396881 | MsG0280007506.01.T01:intron | 40.0% | |
| GTTACATGTGCCTTTATGGT+AGG | - | Chr2:16397164-16397183 | None:intergenic | 40.0% | |
| TAAAGAAGAACCAAAGCCAG+AGG | + | Chr2:16396358-16396377 | MsG0280007506.01.T01:CDS | 40.0% | |
| TAGCGAATCCAGATTCACTA+AGG | + | Chr2:16398508-16398527 | MsG0280007506.01.T01:intron | 40.0% | |
| TGTGAAGGAGGAAGAAAAGA+AGG | + | Chr2:16398998-16399017 | MsG0280007506.01.T01:CDS | 40.0% | |
| TTGGTGTACGTTTGGATAAG+CGG | - | Chr2:16398002-16398021 | None:intergenic | 40.0% | |
| TTGTACAATCCCCCATTCAT+TGG | - | Chr2:16396944-16396963 | None:intergenic | 40.0% | |
| TTGTGTAGATCCCTCTAACA+AGG | - | Chr2:16395767-16395786 | None:intergenic | 40.0% | |
| ! | AAAGAGTTTGCCGCTTATCA+CGG | - | Chr2:16397942-16397961 | None:intergenic | 40.0% |
| ! | ACGGTTGAGATTGATAACCA+CGG | + | Chr2:16398617-16398636 | MsG0280007506.01.T01:intron | 40.0% |
| ! | CAAAGTGGTAGTGAAAGGAA+AGG | + | Chr2:16396227-16396246 | MsG0280007506.01.T01:CDS | 40.0% |
| ! | CATAAAGGCACATGTAACGA+GGG | + | Chr2:16397166-16397185 | MsG0280007506.01.T01:intron | 40.0% |
| ! | GCTATACTTTTGAATCACGG+TGG | + | Chr2:16397886-16397905 | MsG0280007506.01.T01:intron | 40.0% |
| ! | GTCTTTTGAGCACCTTTATG+GGG | - | Chr2:16396260-16396279 | None:intergenic | 40.0% |
| ! | TGCATGTCAAGTTGCACAAA+AGG | - | Chr2:16397232-16397251 | None:intergenic | 40.0% |
| ! | TTGCACTAACGTTACCCTTT+TGG | + | Chr2:16397047-16397066 | MsG0280007506.01.T01:CDS | 40.0% |
| !!! | CCTCCTTTTTTCCTTGTTAG+AGG | + | Chr2:16395753-16395772 | MsG0280007506.01.T01:intron | 40.0% |
| ACATGCAGCTTGCAGCAAAA+TGG | + | Chr2:16397245-16397264 | MsG0280007506.01.T01:intron | 45.0% | |
| ACCAAAGCCAGAGGAGAAAA+AGG | + | Chr2:16396367-16396386 | MsG0280007506.01.T01:CDS | 45.0% | |
| ACCTTTGCCAAAACCTCAAG+AGG | + | Chr2:16396317-16396336 | MsG0280007506.01.T01:CDS | 45.0% | |
| ACTATTGTTACCACAGGTGG+AGG | - | Chr2:16398162-16398181 | None:intergenic | 45.0% | |
| AGATAGTAAGGGCAGCAAAG+TGG | + | Chr2:16396212-16396231 | MsG0280007506.01.T01:CDS | 45.0% | |
| AGATATGAGCCATGCATGTG+TGG | - | Chr2:16397609-16397628 | None:intergenic | 45.0% | |
| ATATGAGCCATGCATGTGTG+GGG | - | Chr2:16397607-16397626 | None:intergenic | 45.0% | |
| ATGCAGCTTGCAGCAAAATG+GGG | + | Chr2:16397247-16397266 | MsG0280007506.01.T01:intron | 45.0% | |
| CATGCAGCTTGCAGCAAAAT+GGG | + | Chr2:16397246-16397265 | MsG0280007506.01.T01:intron | 45.0% | |
| CATGTGTGGGGTTTCCAAAA+TGG | - | Chr2:16397595-16397614 | None:intergenic | 45.0% | |
| CCTCGTTACATGTGCCTTTA+TGG | - | Chr2:16397168-16397187 | None:intergenic | 45.0% | |
| GATATGAGCCATGCATGTGT+GGG | - | Chr2:16397608-16397627 | None:intergenic | 45.0% | |
| GCAAGCTTCTATTGTGAAGG+AGG | + | Chr2:16398986-16399005 | MsG0280007506.01.T01:CDS | 45.0% | |
| GTCTATTGCTAAGATCACGG+TGG | - | Chr2:16397843-16397862 | None:intergenic | 45.0% | |
| TACTGTCTCCTTACCACTTG+TGG | + | Chr2:16398304-16398323 | MsG0280007506.01.T01:intron | 45.0% | |
| TCTAGGTGGGGAAAAGAGTA+TGG | + | Chr2:16396115-16396134 | MsG0280007506.01.T01:intron | 45.0% | |
| TGCACAAGCTTCACAATGCA+TGG | - | Chr2:16395318-16395337 | None:intergenic | 45.0% | |
| TGCATTGTGAAGCTTGTGCA+AGG | + | Chr2:16395318-16395337 | MsG0280007506.01.T01:CDS | 45.0% | |
| TGTGGTCACCTTAGTGAATC+TGG | - | Chr2:16398519-16398538 | None:intergenic | 45.0% | |
| TTGGATAAGCGGTAAACTCG+TGG | - | Chr2:16397991-16398010 | None:intergenic | 45.0% | |
| TTTGCTGCCCTTACTATCTG+CGG | - | Chr2:16396211-16396230 | None:intergenic | 45.0% | |
| ! | ACCTCATCCTTTTTCTCCTC+TGG | - | Chr2:16396377-16396396 | None:intergenic | 45.0% |
| ! | CCATAAAGGCACATGTAACG+AGG | + | Chr2:16397165-16397184 | MsG0280007506.01.T01:intron | 45.0% |
| ! | TTTGTTGTGTGCACCACAAG+TGG | - | Chr2:16398320-16398339 | None:intergenic | 45.0% |
| !! | AGGAGTGTTTGGTGTACGTT+TGG | - | Chr2:16398010-16398029 | None:intergenic | 45.0% |
| !! | TCCTCTTGAGGTTTTGGCAA+AGG | - | Chr2:16396321-16396340 | None:intergenic | 45.0% |
| !! | TCCTTTTTCTCCTCTGGCTT+TGG | - | Chr2:16396371-16396390 | None:intergenic | 45.0% |
| !!! | TCATAAAATTTTAATATTTA+AGG | + | Chr2:16396037-16396056 | MsG0280007506.01.T01:intron | 5.0% |
| !!! | TTAAAACTTTAATAAAATTT+TGG | - | Chr2:16395560-16395579 | None:intergenic | 5.0% |
| AAAGGCAGCAGACCCCATAA+AGG | + | Chr2:16396245-16396264 | MsG0280007506.01.T01:CDS | 50.0% | |
| CACTGAACCACCGTGATAAG+CGG | + | Chr2:16397929-16397948 | MsG0280007506.01.T01:intron | 50.0% | |
| GAGGTGACCGCAGATAGTAA+GGG | + | Chr2:16396201-16396220 | MsG0280007506.01.T01:CDS | 50.0% | |
| GCAAAATGGGGTCACACTCA+CGG | + | Chr2:16397259-16397278 | MsG0280007506.01.T01:intron | 50.0% | |
| GCCAGAGGAGAAAAAGGATG+AGG | + | Chr2:16396373-16396392 | MsG0280007506.01.T01:CDS | 50.0% | |
| GTTGTGTGTGAAAGGAGTGG+AGG | + | Chr2:16396179-16396198 | MsG0280007506.01.T01:intron | 50.0% | |
| TGTGTGCACCACAAGTGGTA+AGG | - | Chr2:16398315-16398334 | None:intergenic | 50.0% | |
| TTAATGTGCTTGATGCGCCG+TGG | - | Chr2:16398637-16398656 | None:intergenic | 50.0% | |
| TTGGAAACCCCACACATGCA+TGG | + | Chr2:16397597-16397616 | MsG0280007506.01.T01:intron | 50.0% | |
| ! | ATTTTTGCAGCCTCCACCTG+TGG | + | Chr2:16398149-16398168 | MsG0280007506.01.T01:intron | 50.0% |
| ! | GGCAGCAAAGTGGTAGTGAA+AGG | + | Chr2:16396222-16396241 | MsG0280007506.01.T01:CDS | 50.0% |
| AGGGTGAGGTCAGCAAGGTA+AGG | + | Chr2:16397522-16397541 | MsG0280007506.01.T01:intron | 55.0% | |
| GGAGGTGACCGCAGATAGTA+AGG | + | Chr2:16396200-16396219 | MsG0280007506.01.T01:CDS | 55.0% | |
| GTGTGTGAAAGGAGTGGAGG+AGG | + | Chr2:16396182-16396201 | MsG0280007506.01.T01:intron | 55.0% | |
| ! | GAGTTTGCCGCTTATCACGG+TGG | - | Chr2:16397939-16397958 | None:intergenic | 55.0% |
| GGATGAGGGTGAGGTCAGCA+AGG | + | Chr2:16397517-16397536 | MsG0280007506.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 16395317 | 16399484 | 16395317 | ID=MsG0280007506.01;Name=MsG0280007506.01 |
| Chr2 | mRNA | 16395317 | 16399484 | 16395317 | ID=MsG0280007506.01.T01;Parent=MsG0280007506.01;Name=MsG0280007506.01.T01;_AED=0.39;_eAED=0.52;_QI=0|0.4|0.66|1|0.6|0.66|6|222|257 |
| Chr2 | exon | 16395317 | 16395371 | 16395317 | ID=MsG0280007506.01.T01:exon:1226;Parent=MsG0280007506.01.T01 |
| Chr2 | exon | 16396193 | 16396394 | 16396193 | ID=MsG0280007506.01.T01:exon:1227;Parent=MsG0280007506.01.T01 |
| Chr2 | exon | 16397023 | 16397068 | 16397023 | ID=MsG0280007506.01.T01:exon:1228;Parent=MsG0280007506.01.T01 |
| Chr2 | exon | 16398159 | 16398249 | 16398159 | ID=MsG0280007506.01.T01:exon:1229;Parent=MsG0280007506.01.T01 |
| Chr2 | exon | 16398883 | 16399484 | 16398883 | ID=MsG0280007506.01.T01:exon:1230;Parent=MsG0280007506.01.T01 |
| Chr2 | CDS | 16395317 | 16395371 | 16395317 | ID=MsG0280007506.01.T01:cds;Parent=MsG0280007506.01.T01 |
| Chr2 | CDS | 16396193 | 16396394 | 16396193 | ID=MsG0280007506.01.T01:cds;Parent=MsG0280007506.01.T01 |
| Chr2 | CDS | 16397023 | 16397068 | 16397023 | ID=MsG0280007506.01.T01:cds;Parent=MsG0280007506.01.T01 |
| Chr2 | CDS | 16398159 | 16398249 | 16398159 | ID=MsG0280007506.01.T01:cds;Parent=MsG0280007506.01.T01 |
| Chr2 | CDS | 16398883 | 16399262 | 16398883 | ID=MsG0280007506.01.T01:cds;Parent=MsG0280007506.01.T01 |
| Chr2 | three_prime_UTR | 16399263 | 16399484 | 16399263 | ID=MsG0280007506.01.T01:three_prime_utr;Parent=MsG0280007506.01.T01 |
| Gene Sequence |
| Protein sequence |
