Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044067.01.T01 | XP_013445298.1 | 94.819 | 386 | 17 | 1 | 1 | 386 | 1 | 383 | 0 | 711 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044067.01.T01 | Q7VG78 | 40.865 | 208 | 112 | 4 | 182 | 381 | 767 | 971 | 2.83E-45 | 170 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048404.01 | MsG0880044067.01 | 0.804302 | 2.305747e-49 | 1.184712e-46 |
| MsG0180000218.01 | MsG0880044067.01 | -0.838542 | 2.702905e-57 | 3.631800e-54 |
| MsG0180000289.01 | MsG0880044067.01 | 0.801947 | 7.077774e-49 | 3.423891e-46 |
| MsG0880044067.01 | MsG0880045294.01 | 0.809876 | 1.523580e-50 | 9.049753e-48 |
| MsG0880044067.01 | MsG0880045483.01 | 0.809295 | 2.030488e-50 | 1.187642e-47 |
| MsG0880044067.01 | MsG0880045765.01 | 0.800389 | 1.474655e-48 | 6.857945e-46 |
| MsG0880044067.01 | MsG0880046457.01 | 0.806949 | 6.416008e-50 | 3.528442e-47 |
| MsG0880044067.01 | MsG0880046496.01 | 0.821468 | 3.974023e-53 | 3.235660e-50 |
| MsG0880044067.01 | MsG0880047055.01 | -0.829591 | 4.725922e-55 | 4.858599e-52 |
| MsG0880044067.01 | MsG0880047754.01 | 0.813090 | 3.051466e-51 | 1.973848e-48 |
| MsG0180002992.01 | MsG0880044067.01 | 0.811766 | 5.939594e-51 | 3.708601e-48 |
| MsG0180003455.01 | MsG0880044067.01 | 0.802386 | 5.749592e-49 | 2.812890e-46 |
| MsG0180003885.01 | MsG0880044067.01 | 0.858635 | 7.195243e-63 | 1.848397e-59 |
| MsG0180003932.01 | MsG0880044067.01 | 0.832634 | 8.452489e-56 | 9.502903e-53 |
| MsG0180003951.01 | MsG0880044067.01 | 0.800984 | 1.115105e-48 | 5.265032e-46 |
| MsG0180004062.01 | MsG0880044067.01 | 0.802999 | 4.298217e-49 | 2.135654e-46 |
| MsG0180004249.01 | MsG0880044067.01 | 0.805229 | 1.476486e-49 | 7.769431e-47 |
| MsG0180004390.01 | MsG0880044067.01 | 0.811371 | 7.240292e-51 | 4.473791e-48 |
| MsG0180004493.01 | MsG0880044067.01 | 0.815036 | 1.135700e-51 | 7.744431e-49 |
| MsG0180004500.01 | MsG0880044067.01 | 0.870061 | 1.939817e-66 | 7.444162e-63 |
| MsG0180005153.01 | MsG0880044067.01 | 0.821039 | 4.989914e-53 | 4.015218e-50 |
| MsG0180005429.01 | MsG0880044067.01 | 0.807542 | 4.804744e-50 | 2.683348e-47 |
| MsG0180005524.01 | MsG0880044067.01 | 0.860444 | 2.056531e-63 | 5.622934e-60 |
| MsG0180005962.01 | MsG0880044067.01 | -0.810643 | 1.040688e-50 | 6.307635e-48 |
| MsG0180006017.01 | MsG0880044067.01 | 0.824308 | 8.658744e-54 | 7.640447e-51 |
| MsG0780040834.01 | MsG0880044067.01 | 0.819410 | 1.178671e-52 | 9.062988e-50 |
| MsG0780041387.01 | MsG0880044067.01 | 0.804476 | 2.121261e-49 | 1.094774e-46 |
| MsG0780041634.01 | MsG0880044067.01 | 0.838195 | 3.321197e-57 | 4.415331e-54 |
| MsG0780041699.01 | MsG0880044067.01 | 0.815199 | 1.044792e-51 | 7.155895e-49 |
| MsG0880042520.01 | MsG0880044067.01 | 0.804474 | 2.123186e-49 | 1.095704e-46 |
| MsG0880042544.01 | MsG0880044067.01 | 0.800466 | 1.422149e-48 | 6.626424e-46 |
| MsG0280011333.01 | MsG0880044067.01 | 0.809478 | 1.854956e-50 | 1.090248e-47 |
| MsG0380012067.01 | MsG0880044067.01 | 0.805725 | 1.161978e-49 | 6.193451e-47 |
| MsG0380014907.01 | MsG0880044067.01 | 0.817817 | 2.709045e-52 | 1.993524e-49 |
| MsG0680031146.01 | MsG0880044067.01 | 0.800002 | 1.767794e-48 | 8.140610e-46 |
| MsG0680031431.01 | MsG0880044067.01 | 0.825651 | 4.174230e-54 | 3.827891e-51 |
| MsG0680031762.01 | MsG0880044067.01 | 0.845597 | 3.677341e-59 | 6.159504e-56 |
| MsG0680033465.01 | MsG0880044067.01 | 0.838856 | 2.242562e-57 | 3.042236e-54 |
| MsG0680035498.01 | MsG0880044067.01 | 0.810420 | 1.162827e-50 | 7.005784e-48 |
| MsG0480019711.01 | MsG0880044067.01 | 0.823132 | 1.633256e-53 | 1.394240e-50 |
| MsG0480020788.01 | MsG0880044067.01 | 0.803893 | 2.804855e-49 | 1.426167e-46 |
| MsG0480020887.01 | MsG0880044067.01 | 0.811796 | 5.850851e-51 | 3.656119e-48 |
| MsG0480021305.01 | MsG0880044067.01 | 0.836404 | 9.543887e-57 | 1.201493e-53 |
| MsG0480021870.01 | MsG0880044067.01 | 0.863303 | 2.741813e-64 | 8.273528e-61 |
| MsG0480022514.01 | MsG0880044067.01 | 0.863746 | 1.997724e-64 | 6.123118e-61 |
| MsG0480022586.01 | MsG0880044067.01 | 0.802337 | 5.884548e-49 | 2.875274e-46 |
| MsG0480023172.01 | MsG0880044067.01 | 0.825281 | 5.104858e-54 | 4.632388e-51 |
| MsG0480023354.01 | MsG0880044067.01 | 0.815666 | 8.224199e-52 | 5.705861e-49 |
| MsG0480023639.01 | MsG0880044067.01 | 0.862156 | 6.187554e-64 | 1.794347e-60 |
| MsG0580024115.01 | MsG0880044067.01 | 0.814407 | 1.564881e-51 | 1.049202e-48 |
| MsG0580024790.01 | MsG0880044067.01 | -0.816738 | 4.737227e-52 | 3.384358e-49 |
| MsG0580025332.01 | MsG0880044067.01 | 0.802375 | 5.779706e-49 | 2.826820e-46 |
| MsG0580025357.01 | MsG0880044067.01 | -0.810478 | 1.129712e-50 | 6.817040e-48 |
| MsG0580025407.01 | MsG0880044067.01 | -0.806048 | 9.940284e-50 | 5.341992e-47 |
| MsG0580025814.01 | MsG0880044067.01 | 0.804183 | 2.440862e-49 | 1.250277e-46 |
| MsG0580025816.01 | MsG0880044067.01 | 0.819845 | 9.378930e-53 | 7.299776e-50 |
| MsG0580025987.01 | MsG0880044067.01 | 0.807548 | 4.789683e-50 | 2.675352e-47 |
| MsG0380014948.01 | MsG0880044067.01 | 0.814123 | 1.808093e-51 | 1.202896e-48 |
| MsG0380015332.01 | MsG0880044067.01 | 0.801669 | 8.073146e-49 | 3.877967e-46 |
| MsG0380015463.01 | MsG0880044067.01 | 0.811955 | 5.404360e-51 | 3.391497e-48 |
| MsG0380015870.01 | MsG0880044067.01 | 0.806722 | 7.165356e-50 | 3.917565e-47 |
| MsG0380016126.01 | MsG0880044067.01 | 0.812553 | 4.000708e-51 | 2.551540e-48 |
| MsG0380016247.01 | MsG0880044067.01 | 0.802310 | 5.960587e-49 | 2.910478e-46 |
| MsG0380016505.01 | MsG0880044067.01 | 0.800553 | 1.365321e-48 | 6.375857e-46 |
| MsG0480018278.01 | MsG0880044067.01 | 0.841329 | 5.077563e-58 | 7.434669e-55 |
| MsG0580026175.01 | MsG0880044067.01 | 0.802897 | 4.511829e-49 | 2.236129e-46 |
| MsG0580028148.01 | MsG0880044067.01 | 0.800119 | 1.673289e-48 | 7.728456e-46 |
| MsG0580029236.01 | MsG0880044067.01 | 0.826222 | 3.054049e-54 | 2.846559e-51 |
| MsG0580029736.01 | MsG0880044067.01 | 0.805899 | 1.068197e-49 | 5.718778e-47 |
| MsG0580029919.01 | MsG0880044067.01 | 0.842674 | 2.238633e-58 | 3.419120e-55 |
| MsG0680030313.01 | MsG0880044067.01 | 0.805633 | 1.214713e-49 | 6.458914e-47 |
| MsG0280006601.01 | MsG0880044067.01 | 0.806123 | 9.581704e-50 | 5.159199e-47 |
| MsG0280007067.01 | MsG0880044067.01 | 0.820462 | 6.772875e-53 | 5.362793e-50 |
| MsG0280007307.01 | MsG0880044067.01 | 0.837056 | 6.511724e-57 | 8.360080e-54 |
| MsG0280007480.01 | MsG0880044067.01 | 0.823453 | 1.373690e-53 | 1.183262e-50 |
| MsG0280007501.01 | MsG0880044067.01 | 0.801369 | 9.300003e-49 | 4.433759e-46 |
| MsG0280008391.01 | MsG0880044067.01 | 0.800434 | 1.444057e-48 | 6.723295e-46 |
| MsG0280009122.01 | MsG0880044067.01 | 0.802356 | 5.833736e-49 | 2.851799e-46 |
| MsG0280009417.01 | MsG0880044067.01 | 0.817351 | 3.449204e-52 | 2.505879e-49 |
| MsG0280010148.01 | MsG0880044067.01 | 0.802577 | 5.251342e-49 | 2.581441e-46 |
| MsG0280010152.01 | MsG0880044067.01 | 0.802302 | 5.982852e-49 | 2.920762e-46 |
| MsG0280010350.01 | MsG0880044067.01 | 0.822718 | 2.038780e-53 | 1.720168e-50 |
| MsG0280010366.01 | MsG0880044067.01 | 0.803851 | 2.862257e-49 | 1.453734e-46 |
| MsG0280010377.01 | MsG0880044067.01 | 0.805007 | 1.642965e-49 | 8.596479e-47 |
| MsG0280010517.01 | MsG0880044067.01 | 0.805984 | 1.025204e-49 | 5.500711e-47 |
| MsG0780036297.01 | MsG0880044067.01 | 0.831750 | 1.398418e-55 | 1.531825e-52 |
| MsG0780036602.01 | MsG0880044067.01 | 0.801491 | 8.780437e-49 | 4.198921e-46 |
| MsG0780036757.01 | MsG0880044067.01 | 0.829458 | 5.089064e-55 | 5.211641e-52 |
| MsG0780037093.01 | MsG0880044067.01 | 0.806012 | 1.011342e-49 | 5.430135e-47 |
| MsG0780037123.01 | MsG0880044067.01 | 0.805093 | 1.576524e-49 | 8.267033e-47 |
| MsG0780038378.01 | MsG0880044067.01 | 0.806564 | 7.735727e-50 | 4.212317e-47 |
| MsG0780039155.01 | MsG0880044067.01 | 0.836157 | 1.103159e-56 | 1.378573e-53 |
| MsG0780039369.01 | MsG0880044067.01 | 0.819871 | 9.248863e-53 | 7.203858e-50 |
| MsG0780039443.01 | MsG0880044067.01 | 0.803092 | 4.111209e-49 | 2.047572e-46 |
| MsG0780040104.01 | MsG0880044067.01 | 0.811487 | 6.832691e-51 | 4.235017e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044067.01.T01 | MTR_8g447000 | 94.819 | 386 | 17 | 1 | 1 | 386 | 1 | 383 | 0.0 | 711 |
| MsG0880044067.01.T01 | MTR_2g063510 | 74.811 | 397 | 81 | 6 | 1 | 386 | 1 | 389 | 0.0 | 560 |
| MsG0880044067.01.T01 | MTR_8g447000 | 94.020 | 301 | 15 | 1 | 1 | 301 | 1 | 298 | 0.0 | 526 |
| MsG0880044067.01.T01 | MTR_2g063510 | 71.028 | 321 | 72 | 7 | 1 | 308 | 1 | 313 | 9.14e-139 | 398 |
| MsG0880044067.01.T01 | MTR_4g130880 | 52.128 | 188 | 88 | 1 | 197 | 382 | 147 | 334 | 2.46e-69 | 223 |
| MsG0880044067.01.T01 | MTR_4g007070 | 50.262 | 191 | 93 | 1 | 195 | 383 | 134 | 324 | 1.73e-68 | 220 |
| MsG0880044067.01.T01 | MTR_0009s0230 | 45.833 | 192 | 102 | 1 | 196 | 385 | 110 | 301 | 1.25e-65 | 211 |
| MsG0880044067.01.T01 | MTR_3g111690 | 49.735 | 189 | 92 | 2 | 198 | 383 | 128 | 316 | 5.15e-65 | 210 |
| MsG0880044067.01.T01 | MTR_0009s0230 | 45.312 | 192 | 102 | 2 | 196 | 385 | 110 | 300 | 6.11e-63 | 204 |
| MsG0880044067.01.T01 | MTR_8g066040 | 40.486 | 247 | 123 | 5 | 158 | 385 | 81 | 322 | 2.44e-61 | 201 |
| MsG0880044067.01.T01 | MTR_4g130880 | 44.037 | 109 | 59 | 1 | 195 | 301 | 145 | 253 | 1.03e-26 | 107 |
| MsG0880044067.01.T01 | MTR_6g052980 | 68.889 | 45 | 14 | 0 | 255 | 299 | 43 | 87 | 1.44e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044067.01.T01 | AT3G12710 | 69.455 | 275 | 66 | 5 | 114 | 385 | 50 | 309 | 7.85e-134 | 385 |
| MsG0880044067.01.T01 | AT5G44680 | 52.062 | 388 | 148 | 7 | 1 | 386 | 1 | 352 | 1.46e-129 | 376 |
| MsG0880044067.01.T01 | AT1G75090 | 52.128 | 188 | 88 | 1 | 198 | 383 | 119 | 306 | 4.45e-73 | 231 |
| MsG0880044067.01.T01 | AT1G80850 | 55.914 | 186 | 80 | 1 | 198 | 381 | 134 | 319 | 8.18e-72 | 228 |
| MsG0880044067.01.T01 | AT5G57970 | 52.356 | 191 | 89 | 1 | 195 | 383 | 151 | 341 | 2.39e-71 | 227 |
| MsG0880044067.01.T01 | AT5G57970 | 52.356 | 191 | 89 | 1 | 195 | 383 | 151 | 341 | 2.39e-71 | 227 |
| MsG0880044067.01.T01 | AT1G13635 | 47.959 | 196 | 100 | 1 | 192 | 385 | 109 | 304 | 5.42e-69 | 220 |
| MsG0880044067.01.T01 | AT1G13635 | 47.959 | 196 | 100 | 1 | 192 | 385 | 109 | 304 | 5.42e-69 | 220 |
| MsG0880044067.01.T01 | AT1G15970 | 51.832 | 191 | 84 | 2 | 198 | 383 | 145 | 332 | 2.60e-68 | 219 |
| MsG0880044067.01.T01 | AT1G15970 | 51.832 | 191 | 84 | 2 | 198 | 383 | 145 | 332 | 2.60e-68 | 219 |
Find 76 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGGTCTTCCATTGATTT+TGG | 0.160140 | 8:+35097344 | None:intergenic |
| TGAAGAAACGTCAGGATTTC+AGG | 0.200675 | 8:-35096035 | MsG0880044067.01.T01:intron |
| GAAATCTTTGTTAAATTTCT+TGG | 0.238097 | 8:+35097102 | None:intergenic |
| GACTTTAACTTTGGTGAAAT+TGG | 0.248820 | 8:+35097198 | None:intergenic |
| TTCTATGCCTACTTTGGTCT+TGG | 0.263306 | 8:+35097401 | None:intergenic |
| GAATTTCTTCTTTCAAGATT+TGG | 0.263831 | 8:+35097297 | None:intergenic |
| CTCTTTGTTGCTGATGGTCT+TGG | 0.278083 | 8:+35097174 | None:intergenic |
| GATGGTAGTGAAAGTGATTT+TGG | 0.282834 | 8:+35097258 | None:intergenic |
| TTGTCCATTAGTTTGGAATA+TGG | 0.287580 | 8:-35095691 | MsG0880044067.01.T01:CDS |
| ACAGATGTTGTCCATTAGTT+TGG | 0.290072 | 8:-35095698 | MsG0880044067.01.T01:CDS |
| ATGTCTTCACTGGAATCTTA+TGG | 0.298466 | 8:+35094644 | None:intergenic |
| AAAATGAAGATTGCTCATTA+TGG | 0.312266 | 8:-35096931 | MsG0880044067.01.T01:CDS |
| AACTTGTATTGTGTGGAAAT+AGG | 0.315120 | 8:+35094670 | None:intergenic |
| GGTCTTGGTGACTTTAACTT+TGG | 0.330900 | 8:+35097189 | None:intergenic |
| ACATGGTCAGAAGAGGCTTT+AGG | 0.333417 | 8:-35094597 | MsG0880044067.01.T01:CDS |
| CTCTCTGAATTACCTGAATT+AGG | 0.352616 | 8:+35096799 | None:intergenic |
| ATTTCCACACAATACAAGTT+TGG | 0.362445 | 8:-35094667 | MsG0880044067.01.T01:CDS |
| GTTCATTTGATAAATACATA+TGG | 0.363388 | 8:-35094711 | MsG0880044067.01.T01:CDS |
| TGCTCATCAGCATGACAATA+AGG | 0.367169 | 8:+35094483 | None:intergenic |
| AGAATTTAATGCAGCAACTT+TGG | 0.368329 | 8:-35095737 | MsG0880044067.01.T01:CDS |
| AGAAGAGGCTTTAGGTTTGT+AGG | 0.376445 | 8:-35094589 | MsG0880044067.01.T01:CDS |
| ATCATGATAAGCAATATAGA+TGG | 0.377489 | 8:+35096264 | None:intergenic |
| AATGCCATATTCCAAACTAA+TGG | 0.383847 | 8:+35095687 | None:intergenic |
| TGGTGGTGTTGATGAAGTTT+TGG | 0.386677 | 8:+35097218 | None:intergenic |
| TTACAAGTTGGTTGAAGAAC+TGG | 0.387400 | 8:+35097327 | None:intergenic |
| TTGACTCTCTTTGTTGCTGA+TGG | 0.389298 | 8:+35097168 | None:intergenic |
| GATTCACCAGGAAGTATTGC+TGG | 0.396259 | 8:-35096994 | MsG0880044067.01.T01:CDS |
| CTTAAGCCAGCAATACTTCC+TGG | 0.401027 | 8:+35096988 | None:intergenic |
| AGCTTTATTACACCTAATTC+AGG | 0.412359 | 8:-35096811 | MsG0880044067.01.T01:intron |
| CAGGAAGTATTGCTGGCTTA+AGG | 0.418763 | 8:-35096987 | MsG0880044067.01.T01:CDS |
| TGCTTATCATGATGAGGAAT+GGG | 0.420107 | 8:-35096254 | MsG0880044067.01.T01:CDS |
| TTCATTTGATAAATACATAT+GGG | 0.421482 | 8:-35094710 | MsG0880044067.01.T01:CDS |
| CTGACGTTTCTTCAAGATTG+AGG | 0.421978 | 8:+35096044 | None:intergenic |
| CATCTGTTTATCAGTTAAGT+TGG | 0.426610 | 8:+35095714 | None:intergenic |
| ACTTACTTGTCATCATGAAC+TGG | 0.454154 | 8:+35096226 | None:intergenic |
| GTTGGAAGTGGTGGTGATGA+TGG | 0.454983 | 8:+35097240 | None:intergenic |
| TCACCTGTTGCCAAAATCAA+TGG | 0.455608 | 8:-35097354 | MsG0880044067.01.T01:CDS |
| TGTGCTTTCTATGCCTACTT+TGG | 0.468054 | 8:+35097395 | None:intergenic |
| TTTGAAATAAGATTGCTTGA+AGG | 0.469481 | 8:+35096862 | None:intergenic |
| TTACAGGTTAACAAGGACTT+TGG | 0.477182 | 8:-35094733 | MsG0880044067.01.T01:intron |
| CATTCGTTTATGCAAGCAGC+TGG | 0.484640 | 8:-35094553 | MsG0880044067.01.T01:CDS |
| TTGCTTATCATGATGAGGAA+TGG | 0.509036 | 8:-35096255 | MsG0880044067.01.T01:CDS |
| GAAGAGGCTTTAGGTTTGTA+GGG | 0.509442 | 8:-35094588 | MsG0880044067.01.T01:CDS |
| TGCTGTGTATAATATTAGAT+AGG | 0.518267 | 8:-35094416 | MsG0880044067.01.T01:three_prime_UTR |
| CTCAATCTTGAAGAAACGTC+AGG | 0.522556 | 8:-35096043 | MsG0880044067.01.T01:CDS |
| AGTCAAAGAGTTTGAAAGAA+GGG | 0.533649 | 8:-35097068 | MsG0880044067.01.T01:CDS |
| GTGCTCAAGTTGGATCTGAT+TGG | 0.533668 | 8:-35096068 | MsG0880044067.01.T01:CDS |
| TTTGGAACTCTGTTACAAGT+TGG | 0.544819 | 8:+35097315 | None:intergenic |
| AGGTGATGTAGCTGTGGCTG+TGG | 0.545571 | 8:+35097371 | None:intergenic |
| GTTTATTGACAGTTTGAGTG+TGG | 0.550766 | 8:-35094354 | MsG0880044067.01.T01:three_prime_UTR |
| AAGTCAAAGAGTTTGAAAGA+AGG | 0.556152 | 8:-35097069 | MsG0880044067.01.T01:CDS |
| TTTAACTTTGGTGAAATTGG+TGG | 0.559341 | 8:+35097201 | None:intergenic |
| TGCAGCTCCAAGACCAAAGT+AGG | 0.560303 | 8:-35097408 | MsG0880044067.01.T01:CDS |
| AGGTGCATTTCAAGTGGCTG+TGG | 0.567532 | 8:+35094503 | None:intergenic |
| AGTTTGAAAGAAGGGTCTTG+TGG | 0.570144 | 8:-35097060 | MsG0880044067.01.T01:CDS |
| GCAAGTGATTAAGTGGTCAT+TGG | 0.573542 | 8:+35094525 | None:intergenic |
| AGGGTCTTGTGGTTCTAATG+AGG | 0.579676 | 8:-35097049 | MsG0880044067.01.T01:CDS |
| GGCTGTGGCAAGTGATTAAG+TGG | 0.581468 | 8:+35094518 | None:intergenic |
| TCATTTGATAAATACATATG+GGG | 0.581577 | 8:-35094709 | MsG0880044067.01.T01:CDS |
| ATTGATATAAGCAGAGTTCG+AGG | 0.582321 | 8:-35095667 | MsG0880044067.01.T01:CDS |
| TCATGATAAGCAATATAGAT+GGG | 0.591991 | 8:+35096265 | None:intergenic |
| GGCAACAGGTGATGTAGCTG+TGG | 0.595305 | 8:+35097365 | None:intergenic |
| TGGCTTAAGGAGAGAACAGA+TGG | 0.595385 | 8:-35096974 | MsG0880044067.01.T01:CDS |
| CTATATTGCTTATCATGATG+AGG | 0.598338 | 8:-35096260 | MsG0880044067.01.T01:CDS |
| TTTCTTAGTTATGAGATGTG+AGG | 0.599222 | 8:-35094378 | MsG0880044067.01.T01:three_prime_UTR |
| AGCAAAGACATGGTCAGAAG+AGG | 0.606430 | 8:-35094604 | MsG0880044067.01.T01:CDS |
| ATTATATTTACAGGTTAACA+AGG | 0.614851 | 8:-35094740 | MsG0880044067.01.T01:intron |
| AGATTGCTTGAAGGATCAAG+AGG | 0.629865 | 8:+35096871 | None:intergenic |
| TGATTAAGTGGTCATTGGTG+AGG | 0.631169 | 8:+35094530 | None:intergenic |
| ATGGCCAAACTTGTATTGTG+TGG | 0.631469 | 8:+35094663 | None:intergenic |
| ACAATAAGGTGCATTTCAAG+TGG | 0.639984 | 8:+35094497 | None:intergenic |
| ATAAACGAATGAATCACTGT+TGG | 0.649684 | 8:+35094565 | None:intergenic |
| AATTTGATCACTGATTCACC+AGG | 0.658850 | 8:-35097006 | MsG0880044067.01.T01:CDS |
| AGAGAGCATAAGCAAAGACA+TGG | 0.662828 | 8:-35094614 | MsG0880044067.01.T01:CDS |
| GCTTATCATGATGAGGAATG+GGG | 0.724849 | 8:-35096253 | MsG0880044067.01.T01:CDS |
| TGGCATTGCAGCATGCACTG+AGG | 0.736384 | 8:-35096954 | MsG0880044067.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAACAAAAAATAAATT+AGG | - | Chr8:35096733-35096752 | MsG0880044067.01.T01:intron | 10.0% |
| !! | ATAATATTCTCTTTATAAAT+TGG | - | Chr8:35096985-35097004 | MsG0880044067.01.T01:CDS | 10.0% |
| !! | TATTATTTAATTGATAAAAG+TGG | + | Chr8:35095326-35095345 | None:intergenic | 10.0% |
| !!! | TGAAATTTAAATTATTTTAC+AGG | - | Chr8:35095980-35095999 | MsG0880044067.01.T01:intron | 10.0% |
| !! | CCTATAAGATATTTATATTA+CGG | - | Chr8:35096290-35096309 | MsG0880044067.01.T01:intron | 15.0% |
| !! | TTCATTTGATAAATACATAT+GGG | - | Chr8:35097041-35097060 | MsG0880044067.01.T01:CDS | 15.0% |
| !!! | CAAATTTTGTTAACTATTAT+TGG | - | Chr8:35094990-35095009 | MsG0880044067.01.T01:intron | 15.0% |
| !!! | TGTGATTATTTATTTTTTGT+TGG | - | Chr8:35095187-35095206 | MsG0880044067.01.T01:intron | 15.0% |
| !! | AAACAAAATTTATGCAAATG+AGG | - | Chr8:35096257-35096276 | MsG0880044067.01.T01:CDS | 20.0% |
| !! | ATAAATATCTTATAGGTTTC+TGG | + | Chr8:35096286-35096305 | None:intergenic | 20.0% |
| !! | ATCTTGAACATAATTAGTTA+TGG | - | Chr8:35095353-35095372 | MsG0880044067.01.T01:intron | 20.0% |
| !! | ATGTCTAAAAATAAAAGAAG+TGG | + | Chr8:35095396-35095415 | None:intergenic | 20.0% |
| !! | ATTATATTTACAGGTTAACA+AGG | - | Chr8:35097011-35097030 | MsG0880044067.01.T01:CDS | 20.0% |
| !! | CCGTAATATAAATATCTTAT+AGG | + | Chr8:35096293-35096312 | None:intergenic | 20.0% |
| !! | GAAATCTTTGTTAAATTTCT+TGG | + | Chr8:35094652-35094671 | None:intergenic | 20.0% |
| !! | GTTCATTTGATAAATACATA+TGG | - | Chr8:35097040-35097059 | MsG0880044067.01.T01:CDS | 20.0% |
| !! | TAGAACATATTTCAAAATTG+CGG | + | Chr8:35096335-35096354 | None:intergenic | 20.0% |
| !! | TCATTTGATAAATACATATG+GGG | - | Chr8:35097042-35097061 | MsG0880044067.01.T01:CDS | 20.0% |
| !! | TGTCTAAAAATAAAAGAAGT+GGG | + | Chr8:35095395-35095414 | None:intergenic | 20.0% |
| !! | TTAGATAGGAACAAAAAAAT+TGG | - | Chr8:35097349-35097368 | MsG0880044067.01.T01:CDS | 20.0% |
| !! | TTGTTAACCTGTAAATATAA+TGG | + | Chr8:35097012-35097031 | None:intergenic | 20.0% |
| !! | TTTAATAAAAAGAGACACAT+TGG | + | Chr8:35095461-35095480 | None:intergenic | 20.0% |
| ! | AAAATGAAGATTGCTCATTA+TGG | - | Chr8:35094820-35094839 | MsG0880044067.01.T01:intron | 25.0% |
| ! | AACATAATTAGTTATGGACT+TGG | - | Chr8:35095359-35095378 | MsG0880044067.01.T01:intron | 25.0% |
| ! | AATTAAAATCTCCATCTTGA+CGG | + | Chr8:35096541-35096560 | None:intergenic | 25.0% |
| ! | AATTGGTCCATTATATTTAC+AGG | - | Chr8:35097002-35097021 | MsG0880044067.01.T01:CDS | 25.0% |
| ! | ACATAATTAGTTATGGACTT+GGG | - | Chr8:35095360-35095379 | MsG0880044067.01.T01:intron | 25.0% |
| ! | AGAGATCAAACAGAATATAT+GGG | + | Chr8:35096570-35096589 | None:intergenic | 25.0% |
| ! | ATCATGATAAGCAATATAGA+TGG | + | Chr8:35095490-35095509 | None:intergenic | 25.0% |
| ! | ATGAAATGTACCTATGTAAA+TGG | - | Chr8:35096906-35096925 | MsG0880044067.01.T01:CDS | 25.0% |
| ! | CTTTAATAATTTACCTAGCA+CGG | - | Chr8:35095749-35095768 | MsG0880044067.01.T01:CDS | 25.0% |
| ! | GAATTTCTTCTTTCAAGATT+TGG | + | Chr8:35094457-35094476 | None:intergenic | 25.0% |
| ! | GCTAAAAATATATTCTTCGA+CGG | + | Chr8:35095054-35095073 | None:intergenic | 25.0% |
| ! | TAGAGATCAAACAGAATATA+TGG | + | Chr8:35096571-35096590 | None:intergenic | 25.0% |
| ! | TCATGATAAGCAATATAGAT+GGG | + | Chr8:35095489-35095508 | None:intergenic | 25.0% |
| ! | TGACACATAAGTATTATGTT+TGG | - | Chr8:35095868-35095887 | MsG0880044067.01.T01:intron | 25.0% |
| ! | TGCTGTGTATAATATTAGAT+AGG | - | Chr8:35097335-35097354 | MsG0880044067.01.T01:CDS | 25.0% |
| ! | TTGATAAAAGTGGTTATCAT+AGG | + | Chr8:35095316-35095335 | None:intergenic | 25.0% |
| ! | TTTACAGAAGTTAACAGATT+AGG | - | Chr8:35096387-35096406 | MsG0880044067.01.T01:intron | 25.0% |
| !! | AAAATGAGTATGCAGATTTT+AGG | + | Chr8:35096822-35096841 | None:intergenic | 25.0% |
| !! | AAATGAGTATGCAGATTTTA+GGG | + | Chr8:35096821-35096840 | None:intergenic | 25.0% |
| !! | ATAAATTAGGTGTCATATTG+TGG | - | Chr8:35096746-35096765 | MsG0880044067.01.T01:intron | 25.0% |
| !! | GATTAGTTATCAGAAAAATC+AGG | + | Chr8:35095030-35095049 | None:intergenic | 25.0% |
| !! | GATTTATTGACTGATTGATT+AGG | - | Chr8:35095268-35095287 | MsG0880044067.01.T01:intron | 25.0% |
| !! | TAATGCTAATCGAATTTTAG+AGG | - | Chr8:35096116-35096135 | MsG0880044067.01.T01:intron | 25.0% |
| !! | TCTTATTTCAAAAACAAGTG+AGG | - | Chr8:35094900-35094919 | MsG0880044067.01.T01:intron | 25.0% |
| !! | TCTTTGTTATAGTTGAAGTA+AGG | + | Chr8:35096488-35096507 | None:intergenic | 25.0% |
| !! | TTTGAAATAAGATTGCTTGA+AGG | + | Chr8:35094892-35094911 | None:intergenic | 25.0% |
| !!! | ACTCAGACTTTTTAAGTATA+TGG | + | Chr8:35095112-35095131 | None:intergenic | 25.0% |
| !!! | ATGTACTTTTTTCAGAATGT+GGG | - | Chr8:35095951-35095970 | MsG0880044067.01.T01:intron | 25.0% |
| !!! | CGAAGAATATATTTTTAGCT+AGG | - | Chr8:35095055-35095074 | MsG0880044067.01.T01:intron | 25.0% |
| !!! | TATGTACTTTTTTCAGAATG+TGG | - | Chr8:35095950-35095969 | MsG0880044067.01.T01:intron | 25.0% |
| !!! | TTTGAACTTCTAGTTTTAAG+TGG | - | Chr8:35095661-35095680 | MsG0880044067.01.T01:CDS | 25.0% |
| AAAAAAGAGAGACTAAGTAG+AGG | + | Chr8:35096172-35096191 | None:intergenic | 30.0% | |
| AACTTGTATTGTGTGGAAAT+AGG | + | Chr8:35097084-35097103 | None:intergenic | 30.0% | |
| AAGTCAAAGAGTTTGAAAGA+AGG | - | Chr8:35094682-35094701 | MsG0880044067.01.T01:CDS | 30.0% | |
| AATGCCATATTCCAAACTAA+TGG | + | Chr8:35096067-35096086 | None:intergenic | 30.0% | |
| ACATTGTAGTAGATAATGTC+AGG | + | Chr8:35096658-35096677 | None:intergenic | 30.0% | |
| AGAATTTAATGCAGCAACTT+TGG | - | Chr8:35096014-35096033 | MsG0880044067.01.T01:intron | 30.0% | |
| AGTCAAAGAGTTTGAAAGAA+GGG | - | Chr8:35094683-35094702 | MsG0880044067.01.T01:CDS | 30.0% | |
| ATAAACGAATGAATCACTGT+TGG | + | Chr8:35097189-35097208 | None:intergenic | 30.0% | |
| ATTAAAATCTCCATCTTGAC+GGG | + | Chr8:35096540-35096559 | None:intergenic | 30.0% | |
| ATTTCCACACAATACAAGTT+TGG | - | Chr8:35097084-35097103 | MsG0880044067.01.T01:CDS | 30.0% | |
| CATAATTAGTTATGGACTTG+GGG | - | Chr8:35095361-35095380 | MsG0880044067.01.T01:intron | 30.0% | |
| CATCTGTTTATCAGTTAAGT+TGG | + | Chr8:35096040-35096059 | None:intergenic | 30.0% | |
| CTATATTGCTTATCATGATG+AGG | - | Chr8:35095491-35095510 | MsG0880044067.01.T01:intron | 30.0% | |
| GAGATCAAACAGAATATATG+GGG | + | Chr8:35096569-35096588 | None:intergenic | 30.0% | |
| TACCTATGTAAATGGAGTAT+TGG | - | Chr8:35096914-35096933 | MsG0880044067.01.T01:CDS | 30.0% | |
| TATTTCAAAAACAAGTGAGG+AGG | - | Chr8:35094903-35094922 | MsG0880044067.01.T01:intron | 30.0% | |
| TGACATTATCTACTACAATG+TGG | - | Chr8:35096657-35096676 | MsG0880044067.01.T01:intron | 30.0% | |
| TTTCTTAGTTATGAGATGTG+AGG | - | Chr8:35097373-35097392 | MsG0880044067.01.T01:CDS | 30.0% | |
| ! | ACCTATGTAAATGGAGTATT+GGG | - | Chr8:35096915-35096934 | MsG0880044067.01.T01:CDS | 30.0% |
| ! | GACTTTAACTTTGGTGAAAT+TGG | + | Chr8:35094556-35094575 | None:intergenic | 30.0% |
| ! | TTGTCCATTAGTTTGGAATA+TGG | - | Chr8:35096060-35096079 | MsG0880044067.01.T01:CDS | 30.0% |
| ! | TTTAACTTTGGTGAAATTGG+TGG | + | Chr8:35094553-35094572 | None:intergenic | 30.0% |
| !! | AGCTTTATTACACCTAATTC+AGG | - | Chr8:35094940-35094959 | MsG0880044067.01.T01:intron | 30.0% |
| !!! | TGTACTTTTTTCAGAATGTG+GGG | - | Chr8:35095952-35095971 | MsG0880044067.01.T01:intron | 30.0% |
| ACAATAAGGTGCATTTCAAG+TGG | + | Chr8:35097257-35097276 | None:intergenic | 35.0% | |
| ACAGATGTTGTCCATTAGTT+TGG | - | Chr8:35096053-35096072 | MsG0880044067.01.T01:CDS | 35.0% | |
| ACTTACTTGTCATCATGAAC+TGG | + | Chr8:35095528-35095547 | None:intergenic | 35.0% | |
| AGAAGTTAACAGATTAGGCA+GGG | - | Chr8:35096392-35096411 | MsG0880044067.01.T01:intron | 35.0% | |
| AGACTAAGTAGAGGAACAAA+AGG | + | Chr8:35096163-35096182 | None:intergenic | 35.0% | |
| ATCCCACTTATGTAACATTG+TGG | - | Chr8:35096621-35096640 | MsG0880044067.01.T01:intron | 35.0% | |
| ATGTCTTCACTGGAATCTTA+TGG | + | Chr8:35097110-35097129 | None:intergenic | 35.0% | |
| ATTGATATAAGCAGAGTTCG+AGG | - | Chr8:35096084-35096103 | MsG0880044067.01.T01:CDS | 35.0% | |
| CTCTCTGAATTACCTGAATT+AGG | + | Chr8:35094955-35094974 | None:intergenic | 35.0% | |
| GTTTATTGACAGTTTGAGTG+TGG | - | Chr8:35097397-35097416 | MsG0880044067.01.T01:CDS | 35.0% | |
| TATGGTCTCAAATTTGAGTC+TGG | + | Chr8:35095094-35095113 | None:intergenic | 35.0% | |
| TGCTTATCATGATGAGGAAT+GGG | - | Chr8:35095497-35095516 | MsG0880044067.01.T01:intron | 35.0% | |
| TTACAGGTTAACAAGGACTT+TGG | - | Chr8:35097018-35097037 | MsG0880044067.01.T01:CDS | 35.0% | |
| TTATAGCTCGTTCTACATTG+TGG | - | Chr8:35096205-35096224 | MsG0880044067.01.T01:intron | 35.0% | |
| TTGCTTATCATGATGAGGAA+TGG | - | Chr8:35095496-35095515 | MsG0880044067.01.T01:intron | 35.0% | |
| ! | AAAAAAGCTTTTGCACATGC+AGG | - | Chr8:35095632-35095651 | MsG0880044067.01.T01:intron | 35.0% |
| ! | ATAAGTGGGATCGAGATTTT+AGG | + | Chr8:35096612-35096631 | None:intergenic | 35.0% |
| ! | ATTAGGTGTCATATTGTGGT+TGG | - | Chr8:35096750-35096769 | MsG0880044067.01.T01:intron | 35.0% |
| ! | TGTGCTAGTGTCACAAATTT+TGG | + | Chr8:35095797-35095816 | None:intergenic | 35.0% |
| ! | TTAGGTGTCATATTGTGGTT+GGG | - | Chr8:35096751-35096770 | MsG0880044067.01.T01:intron | 35.0% |
| ! | TTTGGAACTCTGTTACAAGT+TGG | + | Chr8:35094439-35094458 | None:intergenic | 35.0% |
| !! | AATTTGATCACTGATTCACC+AGG | - | Chr8:35094745-35094764 | MsG0880044067.01.T01:intron | 35.0% |
| !! | CCTATGTAAATGGAGTATTG+GGG | - | Chr8:35096916-35096935 | MsG0880044067.01.T01:CDS | 35.0% |
| !! | GATGGTAGTGAAAGTGATTT+TGG | + | Chr8:35094496-35094515 | None:intergenic | 35.0% |
| !! | TCTGATTTTGATGTCTTCAC+TGG | + | Chr8:35097120-35097139 | None:intergenic | 35.0% |
| !! | TTACAAGTTGGTTGAAGAAC+TGG | + | Chr8:35094427-35094446 | None:intergenic | 35.0% |
| !!! | AACTGGTCTTCCATTGATTT+TGG | + | Chr8:35094410-35094429 | None:intergenic | 35.0% |
| AGATTGCTTGAAGGATCAAG+AGG | + | Chr8:35094883-35094902 | None:intergenic | 40.0% | |
| AGTTTGAAAGAAGGGTCTTG+TGG | - | Chr8:35094691-35094710 | MsG0880044067.01.T01:CDS | 40.0% | |
| ATATACAAGTCCCGTCAAGA+TGG | - | Chr8:35096527-35096546 | MsG0880044067.01.T01:intron | 40.0% | |
| ATGGCCAAACTTGTATTGTG+TGG | + | Chr8:35097091-35097110 | None:intergenic | 40.0% | |
| CAAACAGAATATATGGGGTC+AGG | + | Chr8:35096564-35096583 | None:intergenic | 40.0% | |
| CACTTATGTAACATTGTGGC+GGG | - | Chr8:35096625-35096644 | MsG0880044067.01.T01:intron | 40.0% | |
| CAGAAGTTAACAGATTAGGC+AGG | - | Chr8:35096391-35096410 | MsG0880044067.01.T01:intron | 40.0% | |
| CCACTTATGTAACATTGTGG+CGG | - | Chr8:35096624-35096643 | MsG0880044067.01.T01:intron | 40.0% | |
| CCCCAATACTCCATTTACAT+AGG | + | Chr8:35096919-35096938 | None:intergenic | 40.0% | |
| CGCCACAATGTTACATAAGT+GGG | + | Chr8:35096626-35096645 | None:intergenic | 40.0% | |
| CTCAATCTTGAAGAAACGTC+AGG | - | Chr8:35095708-35095727 | MsG0880044067.01.T01:CDS | 40.0% | |
| CTGACGTTTCTTCAAGATTG+AGG | + | Chr8:35095710-35095729 | None:intergenic | 40.0% | |
| GCAAGTGATTAAGTGGTCAT+TGG | + | Chr8:35097229-35097248 | None:intergenic | 40.0% | |
| GCTTATCATGATGAGGAATG+GGG | - | Chr8:35095498-35095517 | MsG0880044067.01.T01:intron | 40.0% | |
| GTGTGATGAGAAAGAGAAGT+GGG | + | Chr8:35095552-35095571 | None:intergenic | 40.0% | |
| TCACCTGTTGCCAAAATCAA+TGG | - | Chr8:35094397-35094416 | MsG0880044067.01.T01:three_prime_UTR | 40.0% | |
| TGAAGAAACGTCAGGATTTC+AGG | - | Chr8:35095716-35095735 | MsG0880044067.01.T01:CDS | 40.0% | |
| TGATTAAGTGGTCATTGGTG+AGG | + | Chr8:35097224-35097243 | None:intergenic | 40.0% | |
| TGCTCATCAGCATGACAATA+AGG | + | Chr8:35097271-35097290 | None:intergenic | 40.0% | |
| TGTGCTTTCTATGCCTACTT+TGG | + | Chr8:35094359-35094378 | None:intergenic | 40.0% | |
| TGTGTGATGAGAAAGAGAAG+TGG | + | Chr8:35095553-35095572 | None:intergenic | 40.0% | |
| TTCAAAAACAAGTGAGGAGG+AGG | - | Chr8:35094906-35094925 | MsG0880044067.01.T01:intron | 40.0% | |
| TTCTATGCCTACTTTGGTCT+TGG | + | Chr8:35094353-35094372 | None:intergenic | 40.0% | |
| TTGACTCTCTTTGTTGCTGA+TGG | + | Chr8:35094586-35094605 | None:intergenic | 40.0% | |
| ! | AGAGAGCATAAGCAAAGACA+TGG | - | Chr8:35097137-35097156 | MsG0880044067.01.T01:CDS | 40.0% |
| ! | CAATATAAAGTGTCCGTGCT+AGG | + | Chr8:35095765-35095784 | None:intergenic | 40.0% |
| ! | GGTAGTGAAAGTGATTTTGG+TGG | + | Chr8:35094493-35094512 | None:intergenic | 40.0% |
| ! | GGTCTTGGTGACTTTAACTT+TGG | + | Chr8:35094565-35094584 | None:intergenic | 40.0% |
| !! | AGAAGAGGCTTTAGGTTTGT+AGG | - | Chr8:35097162-35097181 | MsG0880044067.01.T01:CDS | 40.0% |
| !! | GAAGAGGCTTTAGGTTTGTA+GGG | - | Chr8:35097163-35097182 | MsG0880044067.01.T01:CDS | 40.0% |
| !! | GTTTTAAGTGGTGCTCAAGT+TGG | - | Chr8:35095673-35095692 | MsG0880044067.01.T01:CDS | 40.0% |
| !!! | CTTCCATTGATTTTGGCAAC+AGG | + | Chr8:35094403-35094422 | None:intergenic | 40.0% |
| !!! | GATGAAGTTTTGGTTGGAAG+TGG | + | Chr8:35094526-35094545 | None:intergenic | 40.0% |
| !!! | GGTGTTGATGAAGTTTTGGT+TGG | + | Chr8:35094532-35094551 | None:intergenic | 40.0% |
| !!! | TGGTGGTGTTGATGAAGTTT+TGG | + | Chr8:35094536-35094555 | None:intergenic | 40.0% |
| ACATGGTCAGAAGAGGCTTT+AGG | - | Chr8:35097154-35097173 | MsG0880044067.01.T01:CDS | 45.0% | |
| AGCAAAGACATGGTCAGAAG+AGG | - | Chr8:35097147-35097166 | MsG0880044067.01.T01:CDS | 45.0% | |
| ATCTACTACAATGTGGCACG+TGG | - | Chr8:35096664-35096683 | MsG0880044067.01.T01:intron | 45.0% | |
| CATTCGTTTATGCAAGCAGC+TGG | - | Chr8:35097198-35097217 | MsG0880044067.01.T01:CDS | 45.0% | |
| CCGCCACAATGTTACATAAG+TGG | + | Chr8:35096627-35096646 | None:intergenic | 45.0% | |
| CTCGTTCTACATTGTGGTTG+AGG | - | Chr8:35096211-35096230 | MsG0880044067.01.T01:intron | 45.0% | |
| CTCTTTGTTGCTGATGGTCT+TGG | + | Chr8:35094580-35094599 | None:intergenic | 45.0% | |
| CTTAAGCCAGCAATACTTCC+TGG | + | Chr8:35094766-35094785 | None:intergenic | 45.0% | |
| TGGCTTAAGGAGAGAACAGA+TGG | - | Chr8:35094777-35094796 | MsG0880044067.01.T01:intron | 45.0% | |
| ! | GAAACGTCAGGATTTCAGGT+TGG | - | Chr8:35095720-35095739 | MsG0880044067.01.T01:CDS | 45.0% |
| !! | AGGGTCTTGTGGTTCTAATG+AGG | - | Chr8:35094702-35094721 | MsG0880044067.01.T01:CDS | 45.0% |
| !! | CAGGAAGTATTGCTGGCTTA+AGG | - | Chr8:35094764-35094783 | MsG0880044067.01.T01:intron | 45.0% |
| !! | GATTCACCAGGAAGTATTGC+TGG | - | Chr8:35094757-35094776 | MsG0880044067.01.T01:intron | 45.0% |
| !! | GTGCTCAAGTTGGATCTGAT+TGG | - | Chr8:35095683-35095702 | MsG0880044067.01.T01:CDS | 45.0% |
| !!! | GAAGTTTTGGTTGGAAGTGG+TGG | + | Chr8:35094523-35094542 | None:intergenic | 45.0% |
| !!! | ATTTAATTTTTTAAGAATAT+AGG | + | Chr8:35095247-35095266 | None:intergenic | 5.0% |
| GGCTGTGGCAAGTGATTAAG+TGG | + | Chr8:35097236-35097255 | None:intergenic | 50.0% | |
| TGCAGCTCCAAGACCAAAGT+AGG | - | Chr8:35094343-35094362 | MsG0880044067.01.T01:three_prime_UTR | 50.0% | |
| ! | AGGTGCATTTCAAGTGGCTG+TGG | + | Chr8:35097251-35097270 | None:intergenic | 50.0% |
| ! | GTTGGAAGTGGTGGTGATGA+TGG | + | Chr8:35094514-35094533 | None:intergenic | 50.0% |
| AGGTGATGTAGCTGTGGCTG+TGG | + | Chr8:35094383-35094402 | None:intergenic | 55.0% | |
| ATCCCACTTGTGTGACACGG+TGG | + | Chr8:35096798-35096817 | None:intergenic | 55.0% | |
| GGCAACAGGTGATGTAGCTG+TGG | + | Chr8:35094389-35094408 | None:intergenic | 55.0% | |
| GGGATCCCACTTGTGTGACA+CGG | + | Chr8:35096801-35096820 | None:intergenic | 55.0% | |
| TGGCATTGCAGCATGCACTG+AGG | - | Chr8:35094797-35094816 | MsG0880044067.01.T01:intron | 55.0% | |
| CACTTGTGTGACACGGTGGC+GGG | + | Chr8:35096794-35096813 | None:intergenic | 60.0% | |
| CCACTTGTGTGACACGGTGG+CGG | + | Chr8:35096795-35096814 | None:intergenic | 60.0% | |
| CGCCACCGTGTCACACAAGT+GGG | - | Chr8:35096793-35096812 | MsG0880044067.01.T01:intron | 60.0% | |
| CCGCCACCGTGTCACACAAG+TGG | - | Chr8:35096792-35096811 | MsG0880044067.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 35094340 | 35097433 | 35094340 | ID=MsG0880044067.01;Name=MsG0880044067.01 |
| Chr8 | mRNA | 35094340 | 35097433 | 35094340 | ID=MsG0880044067.01.T01;Parent=MsG0880044067.01;Name=MsG0880044067.01.T01;_AED=0.32;_eAED=0.32;_QI=0|0.75|0.6|1|1|1|5|149|386 |
| Chr8 | exon | 35096812 | 35097433 | 35096812 | ID=MsG0880044067.01.T01:exon:3513;Parent=MsG0880044067.01.T01 |
| Chr8 | exon | 35096232 | 35096289 | 35096232 | ID=MsG0880044067.01.T01:exon:3514;Parent=MsG0880044067.01.T01 |
| Chr8 | exon | 35096036 | 35096119 | 35096036 | ID=MsG0880044067.01.T01:exon:3515;Parent=MsG0880044067.01.T01 |
| Chr8 | exon | 35095636 | 35095771 | 35095636 | ID=MsG0880044067.01.T01:exon:3516;Parent=MsG0880044067.01.T01 |
| Chr8 | exon | 35094340 | 35094749 | 35094340 | ID=MsG0880044067.01.T01:exon:3517;Parent=MsG0880044067.01.T01 |
| Chr8 | CDS | 35096812 | 35097433 | 35096812 | ID=MsG0880044067.01.T01:cds;Parent=MsG0880044067.01.T01 |
| Chr8 | CDS | 35096232 | 35096289 | 35096232 | ID=MsG0880044067.01.T01:cds;Parent=MsG0880044067.01.T01 |
| Chr8 | CDS | 35096036 | 35096119 | 35096036 | ID=MsG0880044067.01.T01:cds;Parent=MsG0880044067.01.T01 |
| Chr8 | CDS | 35095636 | 35095771 | 35095636 | ID=MsG0880044067.01.T01:cds;Parent=MsG0880044067.01.T01 |
| Chr8 | CDS | 35094489 | 35094749 | 35094489 | ID=MsG0880044067.01.T01:cds;Parent=MsG0880044067.01.T01 |
| Chr8 | three_prime_UTR | 35094340 | 35094488 | 35094340 | ID=MsG0880044067.01.T01:three_prime_utr;Parent=MsG0880044067.01.T01 |
| Gene Sequence |
| Protein sequence |
