Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480023723.01.T01 | XP_013447253.1 | 83.505 | 97 | 2 | 1 | 1 | 97 | 649 | 731 | 1.06E-44 | 164 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480023723.01.T01 | Q9C723 | 50 | 100 | 24 | 3 | 1 | 97 | 649 | 725 | 1.75E-21 | 90.5 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480023723.01.T01 | A0A072U616 | 83.505 | 97 | 2 | 1 | 1 | 97 | 649 | 731 | 5.08e-45 | 164 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047885.01 | MsG0480023723.01 | 0.818747 | 1.667846e-52 | 1.259146e-49 |
MsG0080048065.01 | MsG0480023723.01 | 0.801439 | 8.998449e-49 | 4.297479e-46 |
MsG0080048660.01 | MsG0480023723.01 | 0.838475 | 2.812494e-57 | 3.771374e-54 |
MsG0080048727.01 | MsG0480023723.01 | 0.845882 | 3.078220e-59 | 5.204493e-56 |
MsG0080048748.01 | MsG0480023723.01 | 0.846610 | 1.950001e-59 | 3.375193e-56 |
MsG0080048773.01 | MsG0480023723.01 | 0.820093 | 8.230064e-53 | 6.450800e-50 |
MsG0080048826.01 | MsG0480023723.01 | 0.836258 | 1.039707e-56 | 1.303428e-53 |
MsG0080048849.01 | MsG0480023723.01 | 0.867220 | 1.606971e-65 | 5.567397e-62 |
MsG0080048878.01 | MsG0480023723.01 | 0.807767 | 4.303694e-50 | 2.417660e-47 |
MsG0080048938.01 | MsG0480023723.01 | 0.835170 | 1.960725e-56 | 2.378467e-53 |
MsG0080049002.01 | MsG0480023723.01 | 0.825781 | 3.887710e-54 | 3.578596e-51 |
MsG0080049068.01 | MsG0480023723.01 | 0.816078 | 6.656546e-52 | 4.670712e-49 |
MsG0080049069.01 | MsG0480023723.01 | 0.856958 | 2.261443e-62 | 5.491484e-59 |
MsG0180000017.01 | MsG0480023723.01 | 0.803103 | 4.089805e-49 | 2.037508e-46 |
MsG0180000026.01 | MsG0480023723.01 | 0.809931 | 1.482511e-50 | 8.818564e-48 |
MsG0180000129.01 | MsG0480023723.01 | 0.800985 | 1.114353e-48 | 5.261712e-46 |
MsG0180000184.01 | MsG0480023723.01 | 0.820541 | 6.496260e-53 | 5.154809e-50 |
MsG0180000241.01 | MsG0480023723.01 | 0.801077 | 1.067135e-48 | 5.050343e-46 |
MsG0180000246.01 | MsG0480023723.01 | 0.800143 | 1.655062e-48 | 7.648881e-46 |
MsG0180000489.01 | MsG0480023723.01 | 0.860638 | 1.796122e-63 | 4.943415e-60 |
MsG0180000491.01 | MsG0480023723.01 | 0.811658 | 6.270472e-51 | 3.903813e-48 |
MsG0180000599.01 | MsG0480023723.01 | 0.848574 | 5.618920e-60 | 1.035691e-56 |
MsG0180000670.01 | MsG0480023723.01 | 0.814797 | 1.282949e-51 | 8.692252e-49 |
MsG0180000843.01 | MsG0480023723.01 | 0.801302 | 9.601774e-49 | 4.569795e-46 |
MsG0180001091.01 | MsG0480023723.01 | 0.802420 | 5.657659e-49 | 2.770306e-46 |
MsG0180001270.01 | MsG0480023723.01 | 0.808993 | 2.357394e-50 | 1.367696e-47 |
MsG0180001610.01 | MsG0480023723.01 | 0.840834 | 6.847096e-58 | 9.874028e-55 |
MsG0180001704.01 | MsG0480023723.01 | 0.859939 | 2.923535e-63 | 7.855511e-60 |
MsG0180001722.01 | MsG0480023723.01 | 0.806321 | 8.705707e-50 | 4.711159e-47 |
MsG0180002700.01 | MsG0480023723.01 | 0.872238 | 3.707769e-67 | 1.540114e-63 |
MsG0180003353.01 | MsG0480023723.01 | 0.805433 | 1.338239e-49 | 7.079025e-47 |
MsG0180004017.01 | MsG0480023723.01 | 0.814681 | 1.361240e-51 | 9.193821e-49 |
MsG0180004025.01 | MsG0480023723.01 | 0.837102 | 6.337029e-57 | 8.146957e-54 |
MsG0180004051.01 | MsG0480023723.01 | 0.802724 | 4.898224e-49 | 2.417058e-46 |
MsG0180004103.01 | MsG0480023723.01 | 0.822632 | 2.134814e-53 | 1.796926e-50 |
MsG0180004192.01 | MsG0480023723.01 | 0.805510 | 1.289011e-49 | 6.831958e-47 |
MsG0180004246.01 | MsG0480023723.01 | 0.836926 | 7.025385e-57 | 8.984411e-54 |
MsG0180004518.01 | MsG0480023723.01 | 0.837168 | 6.095204e-57 | 7.851923e-54 |
MsG0180005248.01 | MsG0480023723.01 | -0.806115 | 9.622982e-50 | 5.180276e-47 |
MsG0180005339.01 | MsG0480023723.01 | 0.807214 | 5.638562e-50 | 3.122398e-47 |
MsG0180005349.01 | MsG0480023723.01 | 0.800547 | 1.369399e-48 | 6.393822e-46 |
MsG0180005639.01 | MsG0480023723.01 | 0.801217 | 9.990870e-49 | 4.744781e-46 |
MsG0180005803.01 | MsG0480023723.01 | 0.817358 | 3.436575e-52 | 2.497224e-49 |
MsG0180005807.01 | MsG0480023723.01 | 0.832435 | 9.469537e-56 | 1.058333e-52 |
MsG0180005829.01 | MsG0480023723.01 | 0.815001 | 1.156279e-51 | 7.877365e-49 |
MsG0180006031.01 | MsG0480023723.01 | 0.824287 | 8.759764e-54 | 7.724984e-51 |
MsG0180006035.01 | MsG0480023723.01 | 0.816443 | 5.514774e-52 | 3.908015e-49 |
MsG0180006054.01 | MsG0480023723.01 | 0.829046 | 6.409144e-55 | 6.483856e-52 |
MsG0180006136.01 | MsG0480023723.01 | 0.813246 | 2.819950e-51 | 1.831853e-48 |
MsG0280006309.01 | MsG0480023723.01 | 0.812362 | 4.404188e-51 | 2.794650e-48 |
MsG0280006370.01 | MsG0480023723.01 | 0.851852 | 6.774792e-61 | 1.389382e-57 |
MsG0280006418.01 | MsG0480023723.01 | -0.836752 | 7.783968e-57 | 9.902848e-54 |
MsG0280010564.01 | MsG0480023723.01 | 0.831188 | 1.922657e-55 | 2.070978e-52 |
MsG0280010604.01 | MsG0480023723.01 | -0.802292 | 6.013090e-49 | 2.934652e-46 |
MsG0280010916.01 | MsG0480023723.01 | 0.817690 | 2.892802e-52 | 2.121314e-49 |
MsG0280011073.01 | MsG0480023723.01 | 0.811084 | 8.356316e-51 | 5.124612e-48 |
MsG0280011110.01 | MsG0480023723.01 | -0.863030 | 3.329954e-64 | 9.952887e-61 |
MsG0280011255.01 | MsG0480023723.01 | 0.855136 | 7.726189e-62 | 1.765752e-58 |
MsG0280011404.01 | MsG0480023723.01 | 0.804186 | 2.438026e-49 | 1.248891e-46 |
MsG0280011424.01 | MsG0480023723.01 | 0.809181 | 2.147979e-50 | 1.252559e-47 |
MsG0380012005.01 | MsG0480023723.01 | 0.809340 | 1.986243e-50 | 1.163155e-47 |
MsG0380012567.01 | MsG0480023723.01 | 0.861618 | 9.041793e-64 | 2.573835e-60 |
MsG0380012868.01 | MsG0480023723.01 | 0.835427 | 1.688461e-56 | 2.064063e-53 |
MsG0380013295.01 | MsG0480023723.01 | -0.854281 | 1.366882e-61 | 3.037241e-58 |
MsG0380014386.01 | MsG0480023723.01 | 0.835242 | 1.880724e-56 | 2.286571e-53 |
MsG0380014517.01 | MsG0480023723.01 | 0.805132 | 1.546860e-49 | 8.119816e-47 |
MsG0380014909.01 | MsG0480023723.01 | 0.857533 | 1.530061e-62 | 3.788497e-59 |
MsG0480018525.01 | MsG0480023723.01 | -0.831769 | 1.383506e-55 | 1.516394e-52 |
MsG0480018584.01 | MsG0480023723.01 | 0.832133 | 1.124799e-55 | 1.245840e-52 |
MsG0480018676.01 | MsG0480023723.01 | 0.828088 | 1.091822e-54 | 1.074270e-51 |
MsG0480018850.01 | MsG0480023723.01 | 0.817024 | 4.086135e-52 | 2.942294e-49 |
MsG0480018910.01 | MsG0480023723.01 | 0.811036 | 8.558293e-51 | 5.242006e-48 |
MsG0480018911.01 | MsG0480023723.01 | 0.806484 | 8.045698e-50 | 4.372098e-47 |
MsG0480019313.01 | MsG0480023723.01 | 0.836405 | 9.538769e-57 | 1.200869e-53 |
MsG0480019384.01 | MsG0480023723.01 | 0.840885 | 6.641372e-58 | 9.592682e-55 |
MsG0480019501.01 | MsG0480023723.01 | 0.813208 | 2.875231e-51 | 1.865833e-48 |
MsG0480020024.01 | MsG0480023723.01 | 0.820050 | 8.418610e-53 | 6.590401e-50 |
MsG0480020025.01 | MsG0480023723.01 | 0.854894 | 9.080580e-62 | 2.058717e-58 |
MsG0480020229.01 | MsG0480023723.01 | 0.839471 | 1.553142e-57 | 2.147078e-54 |
MsG0480020322.01 | MsG0480023723.01 | 0.806305 | 8.772721e-50 | 4.745482e-47 |
MsG0480020473.01 | MsG0480023723.01 | 0.826666 | 2.393206e-54 | 2.259068e-51 |
MsG0480020502.01 | MsG0480023723.01 | 0.863822 | 1.892114e-64 | 5.813443e-61 |
MsG0480020690.01 | MsG0480023723.01 | 0.808185 | 3.506315e-50 | 1.991624e-47 |
MsG0480021060.01 | MsG0480023723.01 | 0.818433 | 1.965411e-52 | 1.471086e-49 |
MsG0480021201.01 | MsG0480023723.01 | 0.834684 | 2.600122e-56 | 3.107988e-53 |
MsG0480021207.01 | MsG0480023723.01 | 0.806045 | 9.951493e-50 | 5.347657e-47 |
MsG0480021248.01 | MsG0480023723.01 | 0.873715 | 1.186184e-67 | 5.199063e-64 |
MsG0480021377.01 | MsG0480023723.01 | 0.827014 | 1.977062e-54 | 1.885079e-51 |
MsG0480021406.01 | MsG0480023723.01 | 0.802831 | 4.655499e-49 | 2.303585e-46 |
MsG0480021561.01 | MsG0480023723.01 | 0.831217 | 1.891613e-55 | 2.039252e-52 |
MsG0480022130.01 | MsG0480023723.01 | 0.810368 | 1.193290e-50 | 7.179649e-48 |
MsG0480022162.01 | MsG0480023723.01 | 0.837399 | 5.317403e-57 | 6.898538e-54 |
MsG0480022359.01 | MsG0480023723.01 | 0.802082 | 6.642680e-49 | 3.224498e-46 |
MsG0480022488.01 | MsG0480023723.01 | 0.830109 | 3.534167e-55 | 3.688168e-52 |
MsG0480022491.01 | MsG0480023723.01 | -0.804580 | 2.017383e-49 | 1.043991e-46 |
MsG0480022617.01 | MsG0480023723.01 | 0.801992 | 6.930496e-49 | 3.356425e-46 |
MsG0480022647.01 | MsG0480023723.01 | 0.806366 | 8.519181e-50 | 4.615366e-47 |
MsG0480022918.01 | MsG0480023723.01 | 0.811846 | 5.708478e-51 | 3.571792e-48 |
MsG0480022994.01 | MsG0480023723.01 | 0.830230 | 3.301940e-55 | 3.458180e-52 |
MsG0480023073.01 | MsG0480023723.01 | 0.828131 | 1.066314e-54 | 1.050451e-51 |
MsG0480023190.01 | MsG0480023723.01 | 0.850406 | 1.733563e-60 | 3.392305e-57 |
MsG0480023348.01 | MsG0480023723.01 | -0.807016 | 6.208468e-50 | 3.420311e-47 |
MsG0480023452.01 | MsG0480023723.01 | 0.815633 | 8.363382e-52 | 5.797544e-49 |
MsG0480023471.01 | MsG0480023723.01 | 0.812304 | 4.534377e-51 | 2.872690e-48 |
MsG0480023553.01 | MsG0480023723.01 | 0.809498 | 1.836884e-50 | 1.080197e-47 |
MsG0480023723.01 | MsG0480023845.01 | 0.809540 | 1.799277e-50 | 1.059279e-47 |
MsG0480023723.01 | MsG0480023877.01 | 0.857596 | 1.465801e-62 | 3.637509e-59 |
MsG0480023723.01 | MsG0480024030.01 | 0.802803 | 4.717598e-49 | 2.332580e-46 |
MsG0480023723.01 | MsG0580024285.01 | 0.827976 | 1.161584e-54 | 1.139194e-51 |
MsG0480023723.01 | MsG0580024340.01 | 0.816962 | 4.218634e-52 | 3.032775e-49 |
MsG0480023723.01 | MsG0580024628.01 | 0.822282 | 2.575050e-53 | 2.145838e-50 |
MsG0480023723.01 | MsG0580024759.01 | 0.809565 | 1.777176e-50 | 1.046986e-47 |
MsG0480023723.01 | MsG0580024790.01 | -0.808256 | 3.386692e-50 | 1.927286e-47 |
MsG0480023723.01 | MsG0580024843.01 | 0.826293 | 2.936616e-54 | 2.742663e-51 |
MsG0480023723.01 | MsG0580024953.01 | 0.809425 | 1.904505e-50 | 1.117828e-47 |
MsG0480023723.01 | MsG0580025055.01 | 0.847307 | 1.256140e-59 | 2.223051e-56 |
MsG0480023723.01 | MsG0580025059.01 | 0.828401 | 9.178150e-55 | 9.113142e-52 |
MsG0480023723.01 | MsG0580025366.01 | 0.816965 | 4.212646e-52 | 3.028656e-49 |
MsG0480023723.01 | MsG0580025467.01 | 0.801939 | 7.106487e-49 | 3.437057e-46 |
MsG0480023723.01 | MsG0580025612.01 | 0.805074 | 1.590771e-49 | 8.337797e-47 |
MsG0480023723.01 | MsG0580025827.01 | 0.895007 | 1.441301e-75 | 1.468381e-71 |
MsG0480023723.01 | MsG0580025845.01 | 0.814267 | 1.680692e-51 | 1.122536e-48 |
MsG0480023723.01 | MsG0580026159.01 | -0.848918 | 4.510653e-60 | 8.408442e-57 |
MsG0480023723.01 | MsG0580026498.01 | 0.841593 | 4.326475e-58 | 6.388162e-55 |
MsG0480023723.01 | MsG0580027394.01 | 0.822412 | 2.402495e-53 | 2.009501e-50 |
MsG0480023723.01 | MsG0580027955.01 | 0.815648 | 8.299466e-52 | 5.755514e-49 |
MsG0480023723.01 | MsG0580027979.01 | 0.810565 | 1.082296e-50 | 6.545924e-48 |
MsG0480023723.01 | MsG0580027980.01 | 0.811914 | 5.514713e-51 | 3.456795e-48 |
MsG0480023723.01 | MsG0580028208.01 | 0.804618 | 1.981153e-49 | 1.026226e-46 |
MsG0480023723.01 | MsG0580028306.01 | 0.806512 | 7.934025e-50 | 4.314580e-47 |
MsG0480023723.01 | MsG0580028419.01 | 0.846847 | 1.678987e-59 | 2.928262e-56 |
MsG0480023723.01 | MsG0580028428.01 | 0.839908 | 1.195734e-57 | 1.675515e-54 |
MsG0480023723.01 | MsG0580028551.01 | 0.809183 | 2.146464e-50 | 1.251727e-47 |
MsG0480023723.01 | MsG0580029262.01 | -0.813583 | 2.378633e-51 | 1.559461e-48 |
MsG0480023723.01 | MsG0580029433.01 | 0.812013 | 5.248197e-51 | 3.298713e-48 |
MsG0480023723.01 | MsG0580029529.01 | 0.816939 | 4.269961e-52 | 3.067591e-49 |
MsG0480023723.01 | MsG0580029734.01 | 0.804867 | 1.758037e-49 | 9.166202e-47 |
MsG0480023723.01 | MsG0580029862.01 | 0.805044 | 1.614401e-49 | 8.454965e-47 |
MsG0480023723.01 | MsG0580029912.01 | 0.814055 | 1.872172e-51 | 1.243199e-48 |
MsG0480023723.01 | MsG0580029914.01 | 0.803216 | 3.875921e-49 | 1.936633e-46 |
MsG0480023723.01 | MsG0680030464.01 | 0.807110 | 5.932759e-50 | 3.276223e-47 |
MsG0480023723.01 | MsG0680030514.01 | 0.830653 | 2.601509e-55 | 2.758230e-52 |
MsG0480023723.01 | MsG0680030516.01 | 0.831339 | 1.765172e-55 | 1.909869e-52 |
MsG0480023723.01 | MsG0680030599.01 | 0.855459 | 6.222164e-62 | 1.437621e-58 |
MsG0480023723.01 | MsG0680030680.01 | 0.852291 | 5.084055e-61 | 1.057435e-57 |
MsG0480023723.01 | MsG0680030858.01 | 0.832133 | 1.124821e-55 | 1.245862e-52 |
MsG0480023723.01 | MsG0680030907.01 | 0.817842 | 2.673421e-52 | 1.968646e-49 |
MsG0480023723.01 | MsG0680031826.01 | 0.822178 | 2.721508e-53 | 2.260940e-50 |
MsG0480023723.01 | MsG0680031996.01 | 0.803740 | 3.017272e-49 | 1.528103e-46 |
MsG0480023723.01 | MsG0680031998.01 | 0.816377 | 5.707043e-52 | 4.037170e-49 |
MsG0480023723.01 | MsG0680032254.01 | 0.813993 | 1.932131e-51 | 1.280854e-48 |
MsG0480023723.01 | MsG0680032413.01 | 0.817927 | 2.558650e-52 | 1.888506e-49 |
MsG0480023723.01 | MsG0680032473.01 | -0.817784 | 2.756053e-52 | 2.026274e-49 |
MsG0480023723.01 | MsG0680032827.01 | 0.845747 | 3.349254e-59 | 5.637909e-56 |
MsG0480023723.01 | MsG0680032830.01 | 0.817751 | 2.802536e-52 | 2.058672e-49 |
MsG0480023723.01 | MsG0680033377.01 | 0.826513 | 2.602929e-54 | 2.446262e-51 |
MsG0480023723.01 | MsG0680035707.01 | 0.805198 | 1.499001e-49 | 7.881726e-47 |
MsG0480023723.01 | MsG0680035859.01 | 0.834989 | 2.178839e-56 | 2.628768e-53 |
MsG0480023723.01 | MsG0780035960.01 | 0.845750 | 3.341689e-59 | 5.625886e-56 |
MsG0480023723.01 | MsG0780035965.01 | 0.827042 | 1.946314e-54 | 1.857308e-51 |
MsG0480023723.01 | MsG0780036509.01 | 0.816519 | 5.303032e-52 | 3.765934e-49 |
MsG0480023723.01 | MsG0780036585.01 | 0.821576 | 3.752653e-53 | 3.064710e-50 |
MsG0480023723.01 | MsG0780036620.01 | 0.829056 | 6.372289e-55 | 6.448484e-52 |
MsG0480023723.01 | MsG0780036792.01 | 0.853482 | 2.321449e-61 | 5.023218e-58 |
MsG0480023723.01 | MsG0780036803.01 | 0.844127 | 9.163038e-59 | 1.464974e-55 |
MsG0480023723.01 | MsG0780037351.01 | 0.808488 | 3.021539e-50 | 1.729937e-47 |
MsG0480023723.01 | MsG0780037363.01 | 0.842477 | 2.524233e-58 | 3.832480e-55 |
MsG0480023723.01 | MsG0780038056.01 | 0.841873 | 3.648522e-58 | 5.434358e-55 |
MsG0480023723.01 | MsG0780038784.01 | 0.805501 | 1.294595e-49 | 6.860128e-47 |
MsG0480023723.01 | MsG0780039161.01 | 0.822712 | 2.045069e-53 | 1.725157e-50 |
MsG0480023723.01 | MsG0780039336.01 | 0.811901 | 5.552338e-51 | 3.479190e-48 |
MsG0480023723.01 | MsG0780040235.01 | 0.801972 | 6.996908e-49 | 3.386748e-46 |
MsG0480023723.01 | MsG0780040278.01 | 0.871015 | 9.425187e-67 | 3.743364e-63 |
MsG0480023723.01 | MsG0780040343.01 | 0.807350 | 5.276863e-50 | 2.932413e-47 |
MsG0480023723.01 | MsG0780040700.01 | 0.811717 | 6.087576e-51 | 3.796080e-48 |
MsG0480023723.01 | MsG0780041091.01 | 0.803105 | 4.084901e-49 | 2.035200e-46 |
MsG0480023723.01 | MsG0780041262.01 | 0.808530 | 2.960276e-50 | 1.696702e-47 |
MsG0480023723.01 | MsG0780041272.01 | 0.804662 | 1.939565e-49 | 1.005857e-46 |
MsG0480023723.01 | MsG0780041468.01 | 0.819368 | 1.204775e-52 | 9.252351e-50 |
MsG0480023723.01 | MsG0780041673.01 | 0.801650 | 8.144813e-49 | 3.910466e-46 |
MsG0480023723.01 | MsG0780041747.01 | 0.836174 | 1.091865e-56 | 1.365294e-53 |
MsG0480023723.01 | MsG0780041760.01 | 0.808233 | 3.425785e-50 | 1.948259e-47 |
MsG0480023723.01 | MsG0780041828.01 | 0.811370 | 7.244231e-51 | 4.476046e-48 |
MsG0480023723.01 | MsG0880041852.01 | 0.811032 | 8.576621e-51 | 5.252652e-48 |
MsG0480023723.01 | MsG0880041861.01 | 0.812974 | 3.236532e-51 | 2.087068e-48 |
MsG0480023723.01 | MsG0880041864.01 | 0.823562 | 1.295763e-53 | 1.119583e-50 |
MsG0480023723.01 | MsG0880042022.01 | 0.826617 | 2.459404e-54 | 2.318208e-51 |
MsG0480023723.01 | MsG0880042026.01 | 0.839301 | 1.720273e-57 | 2.365610e-54 |
MsG0480023723.01 | MsG0880042044.01 | 0.850130 | 2.071530e-60 | 4.016781e-57 |
MsG0480023723.01 | MsG0880042086.01 | 0.865925 | 4.145951e-65 | 1.372343e-61 |
MsG0480023723.01 | MsG0880042416.01 | 0.807348 | 5.282648e-50 | 2.935441e-47 |
MsG0480023723.01 | MsG0880043107.01 | 0.857435 | 1.635041e-62 | 4.035014e-59 |
MsG0480023723.01 | MsG0880043249.01 | 0.801372 | 9.288960e-49 | 4.428730e-46 |
MsG0480023723.01 | MsG0880043277.01 | 0.828902 | 6.943539e-55 | 6.994836e-52 |
MsG0480023723.01 | MsG0880043278.01 | 0.802725 | 4.895293e-49 | 2.415679e-46 |
MsG0480023723.01 | MsG0880043298.01 | 0.843581 | 1.283023e-58 | 2.016625e-55 |
MsG0480023723.01 | MsG0880043622.01 | 0.825686 | 4.095247e-54 | 3.759294e-51 |
MsG0480023723.01 | MsG0880043650.01 | 0.802408 | 5.690430e-49 | 2.785430e-46 |
MsG0480023723.01 | MsG0880043955.01 | 0.802016 | 6.851227e-49 | 3.320183e-46 |
MsG0480023723.01 | MsG0880044036.01 | 0.802757 | 4.820488e-49 | 2.380657e-46 |
MsG0480023723.01 | MsG0880044487.01 | 0.871716 | 5.530485e-67 | 2.253333e-63 |
MsG0480023723.01 | MsG0880044538.01 | 0.812469 | 4.173606e-51 | 2.656006e-48 |
MsG0480023723.01 | MsG0880044696.01 | -0.806550 | 7.788647e-50 | 4.239724e-47 |
MsG0480023723.01 | MsG0880044985.01 | 0.840103 | 1.063413e-57 | 1.499279e-54 |
MsG0480023723.01 | MsG0880045285.01 | 0.830945 | 2.206190e-55 | 2.359382e-52 |
MsG0480023723.01 | MsG0880045402.01 | 0.820041 | 8.458380e-53 | 6.619918e-50 |
MsG0480023723.01 | MsG0880045548.01 | -0.811162 | 8.036839e-51 | 4.938637e-48 |
MsG0480023723.01 | MsG0880045668.01 | 0.825162 | 5.446714e-54 | 4.926146e-51 |
MsG0480023723.01 | MsG0880045722.01 | 0.862346 | 5.407688e-64 | 1.578520e-60 |
MsG0480023723.01 | MsG0880045992.01 | 0.829625 | 4.637081e-55 | 4.771838e-52 |
MsG0480023723.01 | MsG0880046119.01 | 0.807023 | 6.189447e-50 | 3.410379e-47 |
MsG0480023723.01 | MsG0880046200.01 | 0.862499 | 4.853080e-64 | 1.424433e-60 |
MsG0480023723.01 | MsG0880046334.01 | -0.811940 | 5.443820e-51 | 3.414819e-48 |
MsG0480023723.01 | MsG0880046434.01 | -0.819836 | 9.422685e-53 | 7.332193e-50 |
MsG0480023723.01 | MsG0880046533.01 | 0.804504 | 2.092904e-49 | 1.080894e-46 |
MsG0480023723.01 | MsG0880046699.01 | 0.838891 | 2.196773e-57 | 2.983142e-54 |
MsG0480023723.01 | MsG0880046765.01 | 0.849835 | 2.504778e-60 | 4.810230e-57 |
MsG0480023723.01 | MsG0880047394.01 | 0.837627 | 4.648791e-57 | 6.074445e-54 |
MsG0480023723.01 | MsG0880047481.01 | -0.832918 | 7.186659e-56 | 8.148232e-53 |
MsG0480023723.01 | MsG0880047538.01 | 0.820980 | 5.147892e-53 | 4.135567e-50 |
MsG0480023723.01 | MsG0880047657.01 | 0.823200 | 1.574277e-53 | 1.346423e-50 |
MsG0480023723.01 | MsG0880047770.01 | 0.829083 | 6.275406e-55 | 6.355870e-52 |
MsG0380015533.01 | MsG0480023723.01 | 0.806681 | 7.308175e-50 | 3.991293e-47 |
MsG0380015784.01 | MsG0480023723.01 | 0.884081 | 2.598887e-71 | 1.691020e-67 |
MsG0380015847.01 | MsG0480023723.01 | -0.809975 | 1.450306e-50 | 8.637006e-48 |
MsG0380015891.01 | MsG0480023723.01 | 0.833749 | 4.459178e-56 | 5.183306e-53 |
MsG0380015896.01 | MsG0480023723.01 | 0.815723 | 7.987693e-52 | 5.550635e-49 |
MsG0380016057.01 | MsG0480023723.01 | 0.847140 | 1.395772e-59 | 2.457682e-56 |
MsG0380016188.01 | MsG0480023723.01 | -0.831719 | 1.423665e-55 | 1.558070e-52 |
MsG0380016284.01 | MsG0480023723.01 | 0.825806 | 3.834560e-54 | 3.532150e-51 |
MsG0380016285.01 | MsG0480023723.01 | 0.805866 | 1.085176e-49 | 5.804920e-47 |
MsG0380016347.01 | MsG0480023723.01 | -0.809827 | 1.561161e-50 | 9.260984e-48 |
MsG0380016540.01 | MsG0480023723.01 | 0.832337 | 1.001344e-55 | 1.115738e-52 |
MsG0380016545.01 | MsG0480023723.01 | 0.805640 | 1.210788e-49 | 6.439101e-47 |
MsG0380016764.01 | MsG0480023723.01 | 0.821604 | 3.696359e-53 | 3.021095e-50 |
MsG0380017202.01 | MsG0480023723.01 | 0.847549 | 1.077829e-59 | 1.922726e-56 |
MsG0380017293.01 | MsG0480023723.01 | 0.844973 | 5.423646e-59 | 8.905435e-56 |
MsG0380017338.01 | MsG0480023723.01 | 0.818672 | 1.735074e-52 | 1.307171e-49 |
MsG0380017663.01 | MsG0480023723.01 | 0.818425 | 1.973760e-52 | 1.476997e-49 |
MsG0380017931.01 | MsG0480023723.01 | 0.843251 | 1.571624e-58 | 2.444395e-55 |
MsG0380018037.01 | MsG0480023723.01 | 0.859934 | 2.933780e-63 | 7.881764e-60 |
MsG0480018091.01 | MsG0480023723.01 | -0.812261 | 4.633041e-51 | 2.931926e-48 |
MsG0480018226.01 | MsG0480023723.01 | 0.802510 | 5.422584e-49 | 2.661106e-46 |
MsG0480018426.01 | MsG0480023723.01 | 0.824032 | 1.005383e-53 | 8.802614e-51 |
MsG0280006587.01 | MsG0480023723.01 | 0.808687 | 2.739581e-50 | 1.576602e-47 |
MsG0280006718.01 | MsG0480023723.01 | 0.803673 | 3.116186e-49 | 1.575369e-46 |
MsG0280006914.01 | MsG0480023723.01 | 0.830054 | 3.644835e-55 | 3.797549e-52 |
MsG0280006996.01 | MsG0480023723.01 | 0.862856 | 3.767939e-64 | 1.119758e-60 |
MsG0280007118.01 | MsG0480023723.01 | 0.808454 | 3.073283e-50 | 1.758024e-47 |
MsG0280007575.01 | MsG0480023723.01 | 0.800783 | 1.225865e-48 | 5.757857e-46 |
MsG0280007647.01 | MsG0480023723.01 | 0.873668 | 1.229891e-67 | 5.381609e-64 |
MsG0280007852.01 | MsG0480023723.01 | 0.824015 | 1.014441e-53 | 8.877689e-51 |
MsG0280008098.01 | MsG0480023723.01 | 0.809314 | 2.011350e-50 | 1.177031e-47 |
MsG0280008709.01 | MsG0480023723.01 | 0.838325 | 3.074781e-57 | 4.103850e-54 |
MsG0280008928.01 | MsG0480023723.01 | 0.871566 | 6.198730e-67 | 2.512202e-63 |
MsG0280008929.01 | MsG0480023723.01 | 0.831231 | 1.876827e-55 | 2.024137e-52 |
MsG0280008942.01 | MsG0480023723.01 | 0.802985 | 4.326978e-49 | 2.149195e-46 |
MsG0280009256.01 | MsG0480023723.01 | 0.844776 | 6.130613e-59 | 1.000386e-55 |
MsG0280009436.01 | MsG0480023723.01 | 0.801072 | 1.069986e-48 | 5.063069e-46 |
MsG0280009699.01 | MsG0480023723.01 | 0.827134 | 1.849900e-54 | 1.770062e-51 |
MsG0280009756.01 | MsG0480023723.01 | 0.845924 | 2.996839e-59 | 5.073598e-56 |
MsG0280009953.01 | MsG0480023723.01 | 0.808903 | 2.463621e-50 | 1.425854e-47 |
MsG0280009960.01 | MsG0480023723.01 | 0.832479 | 9.232466e-56 | 1.033207e-52 |
MsG0280010288.01 | MsG0480023723.01 | 0.804909 | 1.722427e-49 | 8.990458e-47 |
MsG0280010353.01 | MsG0480023723.01 | 0.811944 | 5.433159e-51 | 3.408576e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480023723.01.T01 | MTR_8g099885 | 83.505 | 97 | 2 | 1 | 1 | 97 | 649 | 731 | 1.29e-48 | 164 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480023723.01.T01 | AT1G55090 | 50.000 | 100 | 24 | 3 | 1 | 97 | 649 | 725 | 1.79e-22 | 90.5 |
Find 41 sgRNAs with CRISPR-Local
Find 55 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTGAATGTGGTTGTTTAAA+AGG | 0.218262 | 4:+89014909 | None:intergenic |
ATCTTGCATTATAAAGAAAT+TGG | 0.239593 | 4:+89015709 | None:intergenic |
GTTATTCACCAGAGGATAAT+AGG | 0.260783 | 4:-89015743 | MsG0480023723.01.T01:CDS |
CACCGACTCATTTAGTTTAG+AGG | 0.270557 | 4:-89015079 | MsG0480023723.01.T01:three_prime_UTR |
TTCAATTAGATTCCGACATT+TGG | 0.271951 | 4:+89015543 | None:intergenic |
GGAATCTATATATATTTGTT+TGG | 0.277682 | 4:+89015451 | None:intergenic |
CAAGATGGCCGTATCAATTT+CGG | 0.328849 | 4:-89015692 | MsG0480023723.01.T01:CDS |
GGAGTTGCTGCCGCAGGTTC+AGG | 0.335423 | 4:-89015570 | MsG0480023723.01.T01:CDS |
GAATCTATATATATTTGTTT+GGG | 0.357101 | 4:+89015452 | None:intergenic |
CATGTGCAAGACTGCAAATC+TGG | 0.364062 | 4:-89015475 | MsG0480023723.01.T01:three_prime_UTR |
AGTTCTTATGATTTAAAGTC+AGG | 0.396488 | 4:-89015889 | MsG0480023723.01.T01:CDS |
CTATAACAAACTGAACTTGT+TGG | 0.398444 | 4:-89015272 | MsG0480023723.01.T01:three_prime_UTR |
ACTACATACCTCAGCATGAT+AGG | 0.404154 | 4:+89015909 | None:intergenic |
TTAGATGGTGTTGGTGGAAT+GGG | 0.436891 | 4:-89015591 | MsG0480023723.01.T01:CDS |
TCAGTGGCATCTTCATTAGA+TGG | 0.470114 | 4:-89015606 | MsG0480023723.01.T01:CDS |
CGATGAACTCGTACATGAGC+TGG | 0.481111 | 4:-89015664 | MsG0480023723.01.T01:CDS |
TAGTAATCATACACAACGTC+TGG | 0.485318 | 4:+89015147 | None:intergenic |
TACACTACACATGGGATGAA+AGG | 0.491139 | 4:+89015392 | None:intergenic |
ACACTACACATGGGATGAAA+GGG | 0.496650 | 4:+89015393 | None:intergenic |
ATTAGATGGTGTTGGTGGAA+TGG | 0.513323 | 4:-89015592 | MsG0480023723.01.T01:CDS |
AATTTCTTTATAATGCAAGA+TGG | 0.525324 | 4:-89015707 | MsG0480023723.01.T01:CDS |
GACTAAGTTTAAGTTGAATG+TGG | 0.544570 | 4:+89014897 | None:intergenic |
AGATCAAACCTATTATCCTC+TGG | 0.548297 | 4:+89015735 | None:intergenic |
GCATCTTCATTAGATGGTGT+TGG | 0.549571 | 4:-89015600 | MsG0480023723.01.T01:CDS |
TCTTCATTAGATGGTGTTGG+TGG | 0.558046 | 4:-89015597 | MsG0480023723.01.T01:CDS |
CTCTAAACTAAATGAGTCGG+TGG | 0.562499 | 4:+89015080 | None:intergenic |
AGATGACGATGCAATATGAA+AGG | 0.565960 | 4:-89015317 | MsG0480023723.01.T01:three_prime_UTR |
GTTCTTATGATTTAAAGTCA+GGG | 0.568915 | 4:-89015888 | MsG0480023723.01.T01:CDS |
ATGAAGATGCCACTGACTCA+TGG | 0.574225 | 4:+89015613 | None:intergenic |
ATTTGGATTGCCTGAACCTG+CGG | 0.574902 | 4:+89015560 | None:intergenic |
GGAATGGGAGTTGCTGCCGC+AGG | 0.585359 | 4:-89015576 | MsG0480023723.01.T01:CDS |
CATACCTCAGCATGATAGGA+AGG | 0.586185 | 4:+89015913 | None:intergenic |
AGAGAAATAGAACAATGAGT+AGG | 0.593110 | 4:+89014972 | None:intergenic |
ATCCTCTAAACTAAATGAGT+CGG | 0.595099 | 4:+89015077 | None:intergenic |
ATCAGCAAACCATGAGTCAG+TGG | 0.626159 | 4:-89015622 | MsG0480023723.01.T01:CDS |
GGTTCAGGCAATCCAAATGT+CGG | 0.627370 | 4:-89015555 | MsG0480023723.01.T01:CDS |
CTTGCAGAGTTATTCACCAG+AGG | 0.641776 | 4:-89015751 | MsG0480023723.01.T01:intron |
GACACCTTCCTATCATGCTG+AGG | 0.642869 | 4:-89015917 | MsG0480023723.01.T01:CDS |
AGCATGATAGGAAGGTGTCA+AGG | 0.654248 | 4:+89015921 | None:intergenic |
AAAGTCAGGGTTGAATTGCG+AGG | 0.669268 | 4:-89015875 | MsG0480023723.01.T01:intron |
ATGATAGGAAGGTGTCAAGG+TGG | 0.706059 | 4:+89015924 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TACTTTATTTTGTTTTATTA+GGG | + | Chr4:89015271-89015290 | None:intergenic | 10.0% |
!!! | TTACTTTATTTTGTTTTATT+AGG | + | Chr4:89015272-89015291 | None:intergenic | 10.0% |
!! | GAATCTATATATATTTGTTT+GGG | + | Chr4:89015330-89015349 | None:intergenic | 15.0% |
!!! | ACTTTATTTTGTTTTATTAG+GGG | + | Chr4:89015270-89015289 | None:intergenic | 15.0% |
!! | AATTTCTTTATAATGCAAGA+TGG | - | Chr4:89015072-89015091 | MsG0480023723.01.T01:three_prime_UTR | 20.0% |
!! | ATCTTGCATTATAAAGAAAT+TGG | + | Chr4:89015073-89015092 | None:intergenic | 20.0% |
!! | GGAATCTATATATATTTGTT+TGG | + | Chr4:89015331-89015350 | None:intergenic | 20.0% |
!!! | GTCTTATGCTAAAAATTTTA+TGG | - | Chr4:89015543-89015562 | MsG0480023723.01.T01:exon | 20.0% |
! | CATAGTGTGCTATAAAAATA+TGG | + | Chr4:89015352-89015371 | None:intergenic | 25.0% |
!! | AAAATGTTTTACACTACACA+TGG | + | Chr4:89015399-89015418 | None:intergenic | 25.0% |
!! | AAATGTTTTACACTACACAT+GGG | + | Chr4:89015398-89015417 | None:intergenic | 25.0% |
!! | AGTTCTTATGATTTAAAGTC+AGG | - | Chr4:89014890-89014909 | MsG0480023723.01.T01:three_prime_UTR | 25.0% |
!! | GTTCTTATGATTTAAAGTCA+GGG | - | Chr4:89014891-89014910 | MsG0480023723.01.T01:three_prime_UTR | 25.0% |
!! | TGCTAAAAATTTTATGGTGA+AGG | - | Chr4:89015549-89015568 | MsG0480023723.01.T01:CDS | 25.0% |
!!! | TTATTTTGTTTTATTAGGGG+AGG | + | Chr4:89015267-89015286 | None:intergenic | 25.0% |
AGAGAAATAGAACAATGAGT+AGG | + | Chr4:89015810-89015829 | None:intergenic | 30.0% | |
ATCCTCTAAACTAAATGAGT+CGG | + | Chr4:89015705-89015724 | None:intergenic | 30.0% | |
CTATAACAAACTGAACTTGT+TGG | - | Chr4:89015507-89015526 | MsG0480023723.01.T01:three_prime_UTR | 30.0% | |
GTTGAATGTGGTTGTTTAAA+AGG | + | Chr4:89015873-89015892 | None:intergenic | 30.0% | |
TTCAATTAGATTCCGACATT+TGG | + | Chr4:89015239-89015258 | None:intergenic | 30.0% | |
! | TCGATTTTCCGAAATTGATA+CGG | + | Chr4:89015098-89015117 | None:intergenic | 30.0% |
!! | GACTAAGTTTAAGTTGAATG+TGG | + | Chr4:89015885-89015904 | None:intergenic | 30.0% |
AGATCAAACCTATTATCCTC+TGG | + | Chr4:89015047-89015066 | None:intergenic | 35.0% | |
AGATGACGATGCAATATGAA+AGG | - | Chr4:89015462-89015481 | MsG0480023723.01.T01:three_prime_UTR | 35.0% | |
GTTATTCACCAGAGGATAAT+AGG | - | Chr4:89015036-89015055 | MsG0480023723.01.T01:three_prime_UTR | 35.0% | |
TAGTAATCATACACAACGTC+TGG | + | Chr4:89015635-89015654 | None:intergenic | 35.0% | |
! | ATTCACGCTCCTAAAGATTT+TGG | - | Chr4:89014932-89014951 | MsG0480023723.01.T01:three_prime_UTR | 35.0% |
ACACTACACATGGGATGAAA+GGG | + | Chr4:89015389-89015408 | None:intergenic | 40.0% | |
ACTACATACCTCAGCATGAT+AGG | + | Chr4:89014873-89014892 | None:intergenic | 40.0% | |
CAAGATGGCCGTATCAATTT+CGG | - | Chr4:89015087-89015106 | MsG0480023723.01.T01:three_prime_UTR | 40.0% | |
CTCTAAACTAAATGAGTCGG+TGG | + | Chr4:89015702-89015721 | None:intergenic | 40.0% | |
GCATCTTCATTAGATGGTGT+TGG | - | Chr4:89015179-89015198 | MsG0480023723.01.T01:three_prime_UTR | 40.0% | |
TACACTACACATGGGATGAA+AGG | + | Chr4:89015390-89015409 | None:intergenic | 40.0% | |
TCAGTGGCATCTTCATTAGA+TGG | - | Chr4:89015173-89015192 | MsG0480023723.01.T01:three_prime_UTR | 40.0% | |
! | TCTTCATTAGATGGTGTTGG+TGG | - | Chr4:89015182-89015201 | MsG0480023723.01.T01:three_prime_UTR | 40.0% |
!! | ATTAGATGGTGTTGGTGGAA+TGG | - | Chr4:89015187-89015206 | MsG0480023723.01.T01:three_prime_UTR | 40.0% |
!! | CACCGACTCATTTAGTTTAG+AGG | - | Chr4:89015700-89015719 | MsG0480023723.01.T01:CDS | 40.0% |
!! | TTAGATGGTGTTGGTGGAAT+GGG | - | Chr4:89015188-89015207 | MsG0480023723.01.T01:three_prime_UTR | 40.0% |
AAAGTCAGGGTTGAATTGCG+AGG | - | Chr4:89014904-89014923 | MsG0480023723.01.T01:three_prime_UTR | 45.0% | |
ATCAGCAAACCATGAGTCAG+TGG | - | Chr4:89015157-89015176 | MsG0480023723.01.T01:three_prime_UTR | 45.0% | |
ATTTGGATTGCCTGAACCTG+CGG | + | Chr4:89015222-89015241 | None:intergenic | 45.0% | |
CATACCTCAGCATGATAGGA+AGG | + | Chr4:89014869-89014888 | None:intergenic | 45.0% | |
CATGTGCAAGACTGCAAATC+TGG | - | Chr4:89015304-89015323 | MsG0480023723.01.T01:three_prime_UTR | 45.0% | |
CTTGCAGAGTTATTCACCAG+AGG | - | Chr4:89015028-89015047 | MsG0480023723.01.T01:three_prime_UTR | 45.0% | |
GAGAACCGGCCAAAATCTTT+AGG | + | Chr4:89014944-89014963 | None:intergenic | 45.0% | |
GGTTCAGGCAATCCAAATGT+CGG | - | Chr4:89015224-89015243 | MsG0480023723.01.T01:three_prime_UTR | 45.0% | |
!! | ACGCTCCTAAAGATTTTGGC+CGG | - | Chr4:89014936-89014955 | MsG0480023723.01.T01:three_prime_UTR | 45.0% |
!! | AGCATGATAGGAAGGTGTCA+AGG | + | Chr4:89014861-89014880 | None:intergenic | 45.0% |
!! | ATGAAGATGCCACTGACTCA+TGG | + | Chr4:89015169-89015188 | None:intergenic | 45.0% |
!! | ATGATAGGAAGGTGTCAAGG+TGG | + | Chr4:89014858-89014877 | None:intergenic | 45.0% |
CGATGAACTCGTACATGAGC+TGG | - | Chr4:89015115-89015134 | MsG0480023723.01.T01:three_prime_UTR | 50.0% | |
GACACCTTCCTATCATGCTG+AGG | - | Chr4:89014862-89014881 | MsG0480023723.01.T01:three_prime_UTR | 50.0% | |
GAGAGAGAGAGAGAGAGAAC+CGG | + | Chr4:89014958-89014977 | None:intergenic | 50.0% | |
GGAATGGGAGTTGCTGCCGC+AGG | - | Chr4:89015203-89015222 | MsG0480023723.01.T01:three_prime_UTR | 65.0% | |
GGAGTTGCTGCCGCAGGTTC+AGG | - | Chr4:89015209-89015228 | MsG0480023723.01.T01:three_prime_UTR | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 89014851 | 89015950 | 89014851 | ID=MsG0480023723.01;Name=MsG0480023723.01 |
Chr4 | mRNA | 89014851 | 89015950 | 89014851 | ID=MsG0480023723.01.T01;Parent=MsG0480023723.01;Name=MsG0480023723.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0|0.5|1|1|1|2|697|97 |
Chr4 | exon | 89014851 | 89015766 | 89014851 | ID=MsG0480023723.01.T01:exon:25216;Parent=MsG0480023723.01.T01 |
Chr4 | exon | 89015876 | 89015950 | 89015876 | ID=MsG0480023723.01.T01:exon:25215;Parent=MsG0480023723.01.T01 |
Chr4 | CDS | 89015876 | 89015950 | 89015876 | ID=MsG0480023723.01.T01:cds;Parent=MsG0480023723.01.T01 |
Chr4 | CDS | 89015548 | 89015766 | 89015548 | ID=MsG0480023723.01.T01:cds;Parent=MsG0480023723.01.T01 |
Chr4 | three_prime_UTR | 89014851 | 89015547 | 89014851 | ID=MsG0480023723.01.T01:three_prime_utr;Parent=MsG0480023723.01.T01 |
Gene Sequence |
Protein sequence |