AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020502.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020502.01.T01 MTR_4g052500 69.106 246 67 3 50 286 56 301 5.04e-92 283
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020502.01.T01 AT5G22340 54.682 267 107 3 50 302 57 323 8.87e-91 273
MsG0480020502.01.T01 AT5G22340 52.137 234 98 3 50 269 57 290 1.01e-69 220

Find 15 sgRNAs with CRISPR-Local

Find 623 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAGCCTTCAAAATTCTTC+TGG 0.224073 4:-42519928 None:intergenic
CAGCTTGTGCCAGCCATGTT+TGG 0.234831 4:+42519835 MsG0480020501.01.T01:intron
TTCCCTACATCCTCAAATAT+TGG 0.246136 4:+42519994 MsG0480020501.01.T01:three_prime_UTR
AGCTTGTGCCAGCCATGTTT+GGG 0.359430 4:+42519836 MsG0480020501.01.T01:intron
TATAGAGACAATAAAGACTT+AGG 0.447368 4:+42519895 MsG0480020501.01.T01:CDS
ATGTAAGTAGTGCTTAGTTC+CGG 0.451394 4:-42520033 None:intergenic
TTCCAATATTTGAGGATGTA+GGG 0.453530 4:-42519996 None:intergenic
TTTCCAATATTTGAGGATGT+AGG 0.459665 4:-42519997 None:intergenic
GTATGTGTATATTGAAAGAA+TGG 0.484252 4:+42520083 MsG0480020501.01.T01:intron
TGGAAATGACCAGCTGCATC+CGG 0.505977 4:+42520014 MsG0480020501.01.T01:three_prime_UTR
TGCTTAGTTCCGGATGCAGC+TGG 0.525733 4:-42520023 None:intergenic
CTGGTCATTTCCAATATTTG+AGG 0.526896 4:-42520004 None:intergenic
ACAAACATCCCAAACATGGC+TGG 0.556898 4:-42519844 None:intergenic
GTAGACAAACATCCCAAACA+TGG 0.634660 4:-42519848 None:intergenic
AAAGTGTGTTCTGCTGAACA+TGG 0.650543 4:-42519972 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTAAAATTTTATAT+TGG - Chr4:42515839-42515858 None:intergenic 0.0%
!! AAAAAATTATACTTAATCAT+TGG + Chr4:42517028-42517047 MsG0480020501.01.T01:intron 10.0%
!! ATAATATTGATATGAATATT+AGG - Chr4:42515718-42515737 None:intergenic 10.0%
!! ATTAACTTAAATAAATCATA+AGG - Chr4:42510789-42510808 None:intergenic 10.0%
!! TCAAACTAAAAATAAAATAT+TGG - Chr4:42516665-42516684 None:intergenic 10.0%
!!! AAATCATTTTTTTTCTATTA+AGG - Chr4:42510821-42510840 None:intergenic 10.0%
!!! TGATTAAGTATAATTTTTTT+AGG - Chr4:42517027-42517046 None:intergenic 10.0%
!!! TTTTATTATTTTTCATAGTA+AGG + Chr4:42516813-42516832 MsG0480020501.01.T01:intron 10.0%
!! AACTAAAAATAAAATATTGG+TGG - Chr4:42516662-42516681 None:intergenic 15.0%
!! AATGAAAAAATATGTATAAG+AGG - Chr4:42515531-42515550 None:intergenic 15.0%
!! ACTAAAAATAAAATATTGGT+GGG - Chr4:42516661-42516680 None:intergenic 15.0%
!! ATGAAAAAATATGTATAAGA+GGG - Chr4:42515530-42515549 None:intergenic 15.0%
!! CATAAAAATACATAATTGTT+TGG + Chr4:42510724-42510743 MsG0480020502.01.T01:intron 15.0%
!! TAAAAAATAAAAAAATCAGC+AGG - Chr4:42517920-42517939 None:intergenic 15.0%
!! TGATCAAATATTAAGTTAAT+TGG - Chr4:42519000-42519019 None:intergenic 15.0%
!! TTAAAAATAAAATAGTTCAG+AGG + Chr4:42515849-42515868 MsG0480020502.01.T01:intron 15.0%
!!! AAAAATAATGGAATTTGTTT+AGG + Chr4:42515580-42515599 MsG0480020502.01.T01:intron 15.0%
!!! AAATATTTTATAAGCAGAAT+TGG + Chr4:42519302-42519321 MsG0480020501.01.T01:CDS 15.0%
!!! ACATTTTTATTTTTCCAATT+AGG + Chr4:42515038-42515057 MsG0480020502.01.T01:intron 15.0%
!!! ATATAATATTTTTTTTGTGG+TGG + Chr4:42512868-42512887 MsG0480020502.01.T01:intron 15.0%
!!! ATATTTTTGTTATAAGATGA+AGG - Chr4:42518240-42518259 None:intergenic 15.0%
!!! ATTTCTAAAATACTAGTTTT+AGG + Chr4:42514320-42514339 MsG0480020502.01.T01:intron 15.0%
!!! ATTTCTTTTATACATTTCTT+CGG + Chr4:42510379-42510398 MsG0480020502.01.T01:exon 15.0%
!!! CTACTATTGATTTAATAATA+GGG + Chr4:42516240-42516259 MsG0480020501.01.T01:CDS 15.0%
!!! GTTTGTTGAAAATTATTAAT+TGG + Chr4:42512783-42512802 MsG0480020502.01.T01:intron 15.0%
!!! TATGGTTTTCATTTTTTATT+TGG + Chr4:42517563-42517582 MsG0480020501.01.T01:intron 15.0%
!!! TGTAATTGTTGTTATTTTTT+TGG + Chr4:42514944-42514963 MsG0480020502.01.T01:intron 15.0%
!!! TTTCTAAAATACTAGTTTTA+GGG + Chr4:42514321-42514340 MsG0480020502.01.T01:intron 15.0%
!! AAAAACACAAAACAAAAGTT+TGG - Chr4:42512276-42512295 None:intergenic 20.0%
!! AAAACACAAAACAAAAGTTT+GGG - Chr4:42512275-42512294 None:intergenic 20.0%
!! AAAATACCAAACTTAAAATG+TGG - Chr4:42519621-42519640 None:intergenic 20.0%
!! AAATATGATTAAAGTCGAAT+GGG + Chr4:42518552-42518571 MsG0480020501.01.T01:intron 20.0%
!! AATAACAACAATTACAAAAC+AGG - Chr4:42514940-42514959 None:intergenic 20.0%
!! AATGTTACAATGTTGTTAAA+TGG + Chr4:42516314-42516333 MsG0480020501.01.T01:intron 20.0%
!! AATTTAACTAGATTTGTACT+TGG + Chr4:42518402-42518421 MsG0480020501.01.T01:intron 20.0%
!! AGAATAGCTTATGTTAAAAA+AGG + Chr4:42516701-42516720 MsG0480020501.01.T01:intron 20.0%
!! AGTATATAAGGAAACTAATT+AGG + Chr4:42514284-42514303 MsG0480020502.01.T01:intron 20.0%
!! ATAAATGACAAGAAAGTAAA+TGG - Chr4:42514770-42514789 None:intergenic 20.0%
!! ATATTGATATGAATATTAGG+TGG - Chr4:42515715-42515734 None:intergenic 20.0%
!! ATCTAATTTATCTATTGTTG+TGG + Chr4:42511041-42511060 MsG0480020502.01.T01:intron 20.0%
!! ATGATAAGATTAACTTTAGA+TGG + Chr4:42518146-42518165 MsG0480020501.01.T01:intron 20.0%
!! ATTAGAATTAAACTTTCACT+TGG - Chr4:42510580-42510599 None:intergenic 20.0%
!! CTACTCTTCTTAAAAATTAA+AGG - Chr4:42515988-42516007 None:intergenic 20.0%
!! GAAAAAAACAAAGAAAAAAG+TGG - Chr4:42515456-42515475 None:intergenic 20.0%
!! GAAGAAAAAAAATAATTGAG+CGG - Chr4:42518126-42518145 None:intergenic 20.0%
!! GAATAGCTTATGTTAAAAAA+GGG + Chr4:42516702-42516721 MsG0480020501.01.T01:intron 20.0%
!! GATTAATGGTTGATTATTAA+GGG - Chr4:42515656-42515675 None:intergenic 20.0%
!! GCTTCATATTATAACTTTAA+TGG + Chr4:42516789-42516808 MsG0480020501.01.T01:intron 20.0%
!! GGATCTTTATAAGTAAAAAA+TGG + Chr4:42513112-42513131 MsG0480020502.01.T01:intron 20.0%
!! TAAATATGATTAAAGTCGAA+TGG + Chr4:42518551-42518570 MsG0480020501.01.T01:intron 20.0%
!! TGAAAAAATATGTATAAGAG+GGG - Chr4:42515529-42515548 None:intergenic 20.0%
!! TGATTAATGGTTGATTATTA+AGG - Chr4:42515657-42515676 None:intergenic 20.0%
!! TTAAATGTTAATAGGTACAA+TGG - Chr4:42513291-42513310 None:intergenic 20.0%
!! TTAATTGACCTGATTTATTT+CGG + Chr4:42513811-42513830 MsG0480020502.01.T01:intron 20.0%
!! TTAGAATTAAACTTTCACTT+GGG - Chr4:42510579-42510598 None:intergenic 20.0%
!! TTATCAGATTCAAATACAAA+TGG - Chr4:42514528-42514547 None:intergenic 20.0%
!! TTTATCATTTCTGTTTACTT+TGG - Chr4:42516012-42516031 None:intergenic 20.0%
!! TTTGTTTATTAAGCTCAAAT+TGG - Chr4:42510951-42510970 None:intergenic 20.0%
!!! AAAGAAGCAACAATATTTTA+GGG + Chr4:42514116-42514135 MsG0480020502.01.T01:intron 20.0%
!!! AAAGATTAAGTTTAAGATTC+CGG + Chr4:42511938-42511957 MsG0480020502.01.T01:intron 20.0%
!!! AATTATGTAACAACCTTTTT+TGG - Chr4:42516938-42516957 None:intergenic 20.0%
!!! ACATACTATATGACATTTTT+TGG - Chr4:42520069-42520088 None:intergenic 20.0%
!!! AGTTTACAACTATTTTGTTA+AGG - Chr4:42517627-42517646 None:intergenic 20.0%
!!! ATATTTTTTTGACCAAAACA+AGG - Chr4:42519288-42519307 None:intergenic 20.0%
!!! ATTATGTAACAACCTTTTTT+GGG - Chr4:42516937-42516956 None:intergenic 20.0%
!!! CAATTTTTTTTCCAGAAAAT+CGG - Chr4:42512020-42512039 None:intergenic 20.0%
!!! CATGGTAAAAATGTTTTTAA+GGG - Chr4:42512412-42512431 None:intergenic 20.0%
!!! GATATAGCTTTAATCAATAA+GGG - Chr4:42516285-42516304 None:intergenic 20.0%
!!! GCTACTATTGATTTAATAAT+AGG + Chr4:42516239-42516258 MsG0480020501.01.T01:CDS 20.0%
!!! GTTTACAACTATTTTGTTAA+GGG - Chr4:42517626-42517645 None:intergenic 20.0%
!!! TAAAATATTGTTGCTTCTTT+GGG - Chr4:42514116-42514135 None:intergenic 20.0%
!!! TATTTTTTTGACCAAAACAA+GGG - Chr4:42519287-42519306 None:intergenic 20.0%
!!! TCATGGTAAAAATGTTTTTA+AGG - Chr4:42512413-42512432 None:intergenic 20.0%
!!! TCTTATAGTTTTGTATTGTA+TGG - Chr4:42513623-42513642 None:intergenic 20.0%
!!! TGAATACTTAATTTTCCATT+TGG + Chr4:42515795-42515814 MsG0480020502.01.T01:intron 20.0%
!!! TGATATAGCTTTAATCAATA+AGG - Chr4:42516286-42516305 None:intergenic 20.0%
!!! TTCTTTTTCATGAATATTTG+AGG - Chr4:42519180-42519199 None:intergenic 20.0%
!!! TTGTTTTTAGTTTCTTTTGA+GGG + Chr4:42515492-42515511 MsG0480020502.01.T01:intron 20.0%
!!! TTTATGATTTTCTGGAAAAA+TGG - Chr4:42511508-42511527 None:intergenic 20.0%
!!! TTTCATTTTTTATTTGGATC+TGG + Chr4:42517569-42517588 MsG0480020501.01.T01:intron 20.0%
!!! TTTTAATACCGAAATAAATC+AGG - Chr4:42513822-42513841 None:intergenic 20.0%
! AAAAAGAAGTCAAAGAAGTA+CGG + Chr4:42519192-42519211 MsG0480020501.01.T01:intron 25.0%
! AAACCATTAAGTACATCTAA+TGG - Chr4:42511340-42511359 None:intergenic 25.0%
! AAACCATTAGATGTACTTAA+TGG + Chr4:42511334-42511353 MsG0480020502.01.T01:intron 25.0%
! AAACCATTATGATAAGACAT+AGG - Chr4:42518181-42518200 None:intergenic 25.0%
! AAAGAAAAAAGTGGTCATAA+AGG - Chr4:42515447-42515466 None:intergenic 25.0%
! AAATGTAAAGTTTACCTGTA+CGG - Chr4:42518031-42518050 None:intergenic 25.0%
! AACAAACAAAGCTATAAAAG+TGG - Chr4:42512770-42512789 None:intergenic 25.0%
! AACACTGTATATACAGATAA+TGG - Chr4:42514847-42514866 None:intergenic 25.0%
! AACATCTTGTGTAAAAAAAC+AGG + Chr4:42518644-42518663 MsG0480020501.01.T01:intron 25.0%
! AATATGATTAAAGTCGAATG+GGG + Chr4:42518553-42518572 MsG0480020501.01.T01:intron 25.0%
! AATATTCATGTTTGTGATGT+TGG + Chr4:42513897-42513916 MsG0480020502.01.T01:intron 25.0%
! AATGAAAAACAAAATAGCAC+AGG + Chr4:42511097-42511116 MsG0480020502.01.T01:intron 25.0%
! ACATCTTGTGTAAAAAAACA+GGG + Chr4:42518645-42518664 MsG0480020501.01.T01:intron 25.0%
! ACATGTAATGGTTTGATTAA+TGG - Chr4:42515670-42515689 None:intergenic 25.0%
! ACCAATTTATATGAGTTACA+AGG + Chr4:42512706-42512725 MsG0480020502.01.T01:intron 25.0%
! AGAACTTGAGTTCAATTTAT+GGG - Chr4:42514985-42515004 None:intergenic 25.0%
! ATCATAGATACTAACAGTAA+TGG + Chr4:42517457-42517476 MsG0480020501.01.T01:CDS 25.0%
! ATTATACTTAATCATTGGCA+TGG + Chr4:42517033-42517052 MsG0480020501.01.T01:intron 25.0%
! ATTATCTGTATATACAGTGT+TGG + Chr4:42514846-42514865 MsG0480020502.01.T01:intron 25.0%
! CAAGAACTTGTGATTTAATA+TGG + Chr4:42517196-42517215 MsG0480020501.01.T01:intron 25.0%
! CAATAAATATAGAAACTACC+AGG - Chr4:42516964-42516983 None:intergenic 25.0%
! CTTATATACTGAAGCAATAT+GGG - Chr4:42514274-42514293 None:intergenic 25.0%
! GAAAAAATATGTATAAGAGG+GGG - Chr4:42515528-42515547 None:intergenic 25.0%
! GTAAAACTGATTACATGTAA+TGG - Chr4:42515682-42515701 None:intergenic 25.0%
! GTATGTGTATATTGAAAGAA+TGG + Chr4:42520083-42520102 MsG0480020501.01.T01:intron 25.0%
! GTTAATAAACATGAAGATTC+CGG - Chr4:42511998-42512017 None:intergenic 25.0%
! TAGAATTAAACTTTCACTTG+GGG - Chr4:42510578-42510597 None:intergenic 25.0%
! TATAGAGACAATAAAGACTT+AGG + Chr4:42519895-42519914 MsG0480020501.01.T01:CDS 25.0%
! TATAGTGAAATAGGCAAAAA+GGG + Chr4:42512559-42512578 MsG0480020502.01.T01:intron 25.0%
! TATCATAGTATCATACAGAT+TGG - Chr4:42517797-42517816 None:intergenic 25.0%
! TATGAGTGAGTGAAAAATAA+TGG + Chr4:42515568-42515587 MsG0480020502.01.T01:intron 25.0%
! TATTTGAATCTGATAATCAC+AGG + Chr4:42514532-42514551 MsG0480020502.01.T01:intron 25.0%
! TCCTTGTAACTCATATAAAT+TGG - Chr4:42512710-42512729 None:intergenic 25.0%
! TCTAGTTAAATTCAACAAGA+CGG - Chr4:42518394-42518413 None:intergenic 25.0%
! TTATAGTGAAATAGGCAAAA+AGG + Chr4:42512558-42512577 MsG0480020502.01.T01:intron 25.0%
! TTGAAGGATAGAGAATTAAA+CGG + Chr4:42517162-42517181 MsG0480020501.01.T01:intron 25.0%
! TTTATTAAGCTCAAATTGGT+TGG - Chr4:42510947-42510966 None:intergenic 25.0%
!! AAAAAGTATATAATCGATCG+AGG - Chr4:42513202-42513221 None:intergenic 25.0%
!! AAATGATAAAGTATTAGCCA+AGG + Chr4:42516022-42516041 MsG0480020502.01.T01:intron 25.0%
!! AAATGTTTCTAATGATCTCA+TGG + Chr4:42518756-42518775 MsG0480020501.01.T01:intron 25.0%
!! AATGATAAAGTATTAGCCAA+GGG + Chr4:42516023-42516042 MsG0480020502.01.T01:intron 25.0%
!! AATTTCCAGAAGAATTTTGA+AGG + Chr4:42519923-42519942 MsG0480020501.01.T01:CDS 25.0%
!! ACTATTTGAAGATTTGAAAC+AGG + Chr4:42511888-42511907 MsG0480020502.01.T01:intron 25.0%
!! ACTATTTTGTTAAGGGATAA+TGG - Chr4:42517619-42517638 None:intergenic 25.0%
!! ACTTAATGGTTTTCTTTGAT+CGG + Chr4:42511348-42511367 MsG0480020502.01.T01:intron 25.0%
!! ATATGAAAGAAAGACTAGTT+AGG - Chr4:42512741-42512760 None:intergenic 25.0%
!! ATCAGTTTCGAAATTTTGAA+AGG - Chr4:42511830-42511849 None:intergenic 25.0%
!! CAAAGAAGCAACAATATTTT+AGG + Chr4:42514115-42514134 MsG0480020502.01.T01:intron 25.0%
!! CATTAGAAACATTTGACTTA+GGG - Chr4:42518750-42518769 None:intergenic 25.0%
!! CTAAAATATTGTTGCTTCTT+TGG - Chr4:42514117-42514136 None:intergenic 25.0%
!! CTATTTGAAGATTTGAAACA+GGG + Chr4:42511889-42511908 MsG0480020502.01.T01:intron 25.0%
!! TATGTGAGTTTATGATTTTC+TGG - Chr4:42511516-42511535 None:intergenic 25.0%
!! TCATTAGAAACATTTGACTT+AGG - Chr4:42518751-42518770 None:intergenic 25.0%
!! TGTTCTTTATTTGCTAAAGT+CGG + Chr4:42517834-42517853 MsG0480020501.01.T01:intron 25.0%
!! TTAAGCATAAAGTACTCTAA+AGG + Chr4:42512594-42512613 MsG0480020502.01.T01:intron 25.0%
!! TTAAGTACATCTAATGGTTT+TGG - Chr4:42511334-42511353 None:intergenic 25.0%
!! TTTATGCCTACAAATTTGTT+GGG + Chr4:42516881-42516900 MsG0480020501.01.T01:intron 25.0%
!!! AAAGGTTAAACTGTTTTTGT+TGG - Chr4:42510638-42510657 None:intergenic 25.0%
!!! AAATCCATAATTTTAGTGAG+TGG + Chr4:42517111-42517130 MsG0480020501.01.T01:intron 25.0%
!!! AAGCTTGTTTGTTGTTTAAT+TGG + Chr4:42510902-42510921 MsG0480020502.01.T01:intron 25.0%
!!! ACAATATTTTAGGGAGTAAT+TGG + Chr4:42514125-42514144 MsG0480020502.01.T01:intron 25.0%
!!! ATGTAGTACTGGTTTAAAAT+AGG - Chr4:42518925-42518944 None:intergenic 25.0%
!!! ATGTTTATTAACCGATTTTC+TGG + Chr4:42512006-42512025 MsG0480020502.01.T01:intron 25.0%
!!! CGCATTATACTATTTTAATC+AGG + Chr4:42518974-42518993 MsG0480020501.01.T01:intron 25.0%
!!! CTTGTTTTTAGTTTCTTTTG+AGG + Chr4:42515491-42515510 MsG0480020502.01.T01:intron 25.0%
!!! TAAGTGTTGAGTATTTGTAT+TGG + Chr4:42513855-42513874 MsG0480020502.01.T01:intron 25.0%
!!! TAATTTTTTTAGGTGCTCAA+AGG - Chr4:42517017-42517036 None:intergenic 25.0%
!!! TATATGACATTTTTTGGTAC+AGG - Chr4:42520063-42520082 None:intergenic 25.0%
!!! TCTCCTTTTTCTTTAAAGAA+AGG + Chr4:42515629-42515648 MsG0480020502.01.T01:intron 25.0%
!!! TGTAGTACTGGTTTAAAATA+GGG - Chr4:42518924-42518943 None:intergenic 25.0%
!!! TTCAAGTTTGTCTTTTTTCT+TGG + Chr4:42517680-42517699 MsG0480020501.01.T01:intron 25.0%
!!! TTTCCATTTGGTTTTTACAA+GGG + Chr4:42515807-42515826 MsG0480020502.01.T01:intron 25.0%
!!! TTTTCCATTTGGTTTTTACA+AGG + Chr4:42515806-42515825 MsG0480020502.01.T01:intron 25.0%
AAACCATTTCCACAACAAAA+TGG - Chr4:42511188-42511207 None:intergenic 30.0%
AAAGATGAAGTTTGAGAGAA+AGG + Chr4:42512042-42512061 MsG0480020502.01.T01:intron 30.0%
AAAGCGCATTATAGTGAAAT+AGG + Chr4:42512550-42512569 MsG0480020502.01.T01:intron 30.0%
AAAGTGGTCATAAAGGTAAA+AGG - Chr4:42515440-42515459 None:intergenic 30.0%
AAGTGCATTTCCATTTACAT+TGG - Chr4:42510995-42511014 None:intergenic 30.0%
ACAATTCTGCACCAATAAAT+AGG + Chr4:42517524-42517543 MsG0480020501.01.T01:CDS 30.0%
ACACGAATCAGTAACAAATA+AGG - Chr4:42514196-42514215 None:intergenic 30.0%
ACACTCCTCTGATTAAAATT+AGG - Chr4:42516751-42516770 None:intergenic 30.0%
AGATTAGAATAAGTAGGTCT+TGG - Chr4:42512496-42512515 None:intergenic 30.0%
AGGTTGTAGATTGAATTTGA+AGG + Chr4:42514494-42514513 MsG0480020502.01.T01:intron 30.0%
ATAAAGCAAATGTTAATGCG+AGG - Chr4:42516866-42516885 None:intergenic 30.0%
ATAGATACTAACAGTAATGG+CGG + Chr4:42517460-42517479 MsG0480020501.01.T01:CDS 30.0%
ATATGATTAAAGTCGAATGG+GGG + Chr4:42518554-42518573 MsG0480020501.01.T01:intron 30.0%
ATGATTCAAGTCAACAAGTT+TGG + Chr4:42512429-42512448 MsG0480020502.01.T01:intron 30.0%
ATTCTTTCGAGAAAACAATC+AGG + Chr4:42519348-42519367 MsG0480020501.01.T01:CDS 30.0%
CAAAACGTAGATTCGAAATT+CGG - Chr4:42511615-42511634 None:intergenic 30.0%
CCATATTGCTTCAGTATATA+AGG + Chr4:42514272-42514291 MsG0480020502.01.T01:intron 30.0%
CCTACTTATTCTAATCTAAG+AGG + Chr4:42512499-42512518 MsG0480020502.01.T01:intron 30.0%
CCTCTTAGATTAGAATAAGT+AGG - Chr4:42512502-42512521 None:intergenic 30.0%
CCTTATATACTGAAGCAATA+TGG - Chr4:42514275-42514294 None:intergenic 30.0%
CTACTATAAGTTATGCGATT+GGG + Chr4:42518332-42518351 MsG0480020501.01.T01:CDS 30.0%
CTTTAATCGAAGAACCTAAT+TGG - Chr4:42515055-42515074 None:intergenic 30.0%
CTTTATGCCTACAAATTTGT+TGG + Chr4:42516880-42516899 MsG0480020501.01.T01:intron 30.0%
CTTTCTCTGTTATCTGAAAA+CGG - Chr4:42511758-42511777 None:intergenic 30.0%
GAAACGTTAAACAAATCTGA+CGG + Chr4:42512153-42512172 MsG0480020502.01.T01:intron 30.0%
GACAAATCTAATTCTATCCA+TGG - Chr4:42516102-42516121 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - Chr4:42512913-42512932 None:intergenic 30.0%
GAGAACTTGAGTTCAATTTA+TGG - Chr4:42514986-42515005 None:intergenic 30.0%
GCGAGACATTAAATGTTAAT+AGG - Chr4:42513299-42513318 None:intergenic 30.0%
GGTAGAATTAGAAAGCAATT+GGG - Chr4:42510667-42510686 None:intergenic 30.0%
GTAGAATTAGAAAGCAATTG+GGG - Chr4:42510666-42510685 None:intergenic 30.0%
GTGTAGAAAGCAATTATGTT+GGG - Chr4:42510556-42510575 None:intergenic 30.0%
GTTTAATTGGAACTATCCTA+AGG + Chr4:42510915-42510934 MsG0480020502.01.T01:intron 30.0%
TAATGTCTCGCTTAGTTAAT+TGG + Chr4:42513308-42513327 MsG0480020502.01.T01:intron 30.0%
TAATTGTTTGGCAGACTATT+TGG + Chr4:42510736-42510755 MsG0480020502.01.T01:intron 30.0%
TACAAATGATAGTTCGTGAT+CGG - Chr4:42518520-42518539 None:intergenic 30.0%
TACACCACTCACTAAAATTA+TGG - Chr4:42517118-42517137 None:intergenic 30.0%
TACTAACCAAAACCACAAAT+CGG + Chr4:42511656-42511675 MsG0480020502.01.T01:intron 30.0%
TACTATAAGTTATGCGATTG+GGG + Chr4:42518333-42518352 MsG0480020501.01.T01:CDS 30.0%
TATCTCCTTGATACATGTTA+AGG + Chr4:42514422-42514441 MsG0480020502.01.T01:intron 30.0%
TATTATGTTGATGCAAGTCT+AGG + Chr4:42514371-42514390 MsG0480020502.01.T01:intron 30.0%
TCAAAGGATAGAAATAATGG+CGG - Chr4:42517001-42517020 None:intergenic 30.0%
TCTGCAAATCACTCTATATA+TGG + Chr4:42512295-42512314 MsG0480020502.01.T01:intron 30.0%
TGACAAGACTAGAAAAACAA+AGG - Chr4:42518059-42518078 None:intergenic 30.0%
TGACTTTGCTAAACTTGTAT+TGG + Chr4:42515092-42515111 MsG0480020502.01.T01:intron 30.0%
TGCTCAAAGGATAGAAATAA+TGG - Chr4:42517004-42517023 None:intergenic 30.0%
TGTCATAGCCAATTTATGAA+AGG + Chr4:42516387-42516406 MsG0480020501.01.T01:intron 30.0%
TTATAGTAGCCTGAAAAGAT+GGG - Chr4:42518321-42518340 None:intergenic 30.0%
TTCCAATATTTGAGGATGTA+GGG - Chr4:42519999-42520018 None:intergenic 30.0%
TTCTTTCGAGAAAACAATCA+GGG + Chr4:42519349-42519368 MsG0480020501.01.T01:CDS 30.0%
TTGCAATAACAAACCTGAAA+AGG - Chr4:42518360-42518379 None:intergenic 30.0%
TTGCCTATGTCTTATCATAA+TGG + Chr4:42518175-42518194 MsG0480020501.01.T01:intron 30.0%
TTGTGATTTAATATGGCGAA+TGG + Chr4:42517203-42517222 MsG0480020501.01.T01:intron 30.0%
TTGTGTAAAAAAACAGGGTA+AGG + Chr4:42518650-42518669 MsG0480020501.01.T01:intron 30.0%
TTTCCAATATTTGAGGATGT+AGG - Chr4:42520000-42520019 None:intergenic 30.0%
! AAATGTCTTTGCTATGTATC+TGG - Chr4:42510363-42510382 None:intergenic 30.0%
! ACACATGTATGATGTTTCTA+TGG - Chr4:42519487-42519506 None:intergenic 30.0%
! ACACGTCAACTTTTTATCTA+AGG - Chr4:42513425-42513444 None:intergenic 30.0%
! ACGTCAACTTTTTATCTAAG+GGG - Chr4:42513423-42513442 None:intergenic 30.0%
! ATCCTATGTTTTCATGTCAT+TGG + Chr4:42517057-42517076 MsG0480020501.01.T01:intron 30.0%
! CACGTCAACTTTTTATCTAA+GGG - Chr4:42513424-42513443 None:intergenic 30.0%
! CCAACCATTTAAAATTCACT+AGG - Chr4:42518897-42518916 None:intergenic 30.0%
! CCTAGTGAATTTTAAATGGT+TGG + Chr4:42518894-42518913 MsG0480020501.01.T01:intron 30.0%
! GAACATTAGATGACTAGTTA+AGG - Chr4:42513177-42513196 None:intergenic 30.0%
! GAAGCCTAGTGAATTTTAAA+TGG + Chr4:42518890-42518909 MsG0480020501.01.T01:intron 30.0%
! GAATCTACGTTTTGCAAAAT+CGG + Chr4:42511621-42511640 MsG0480020502.01.T01:intron 30.0%
! GAATTGAAAGGTGTAACAAT+TGG - Chr4:42516126-42516145 None:intergenic 30.0%
! GATTGTAACGATGATTTTTG+TGG - Chr4:42511542-42511561 None:intergenic 30.0%
! GGACCTTTCTTTAAAGAAAA+AGG - Chr4:42515635-42515654 None:intergenic 30.0%
! GTATTTTATCAACGACTTGT+TGG + Chr4:42519448-42519467 MsG0480020501.01.T01:CDS 30.0%
! TAAGAAGTACGAACATCTTT+CGG - Chr4:42514166-42514185 None:intergenic 30.0%
! TCAATCTTCGTTGCTTATTT+TGG + Chr4:42519066-42519085 MsG0480020501.01.T01:intron 30.0%
! TGTCTTGCAAACATTTTTGA+AGG + Chr4:42517146-42517165 MsG0480020501.01.T01:intron 30.0%
! TGTTGTTGAGATTTGAGTTT+CGG - Chr4:42511730-42511749 None:intergenic 30.0%
! TTTCACTATAATGCGCTTTT+AGG - Chr4:42512549-42512568 None:intergenic 30.0%
! TTTCCACAACAAAATGGTTT+TGG - Chr4:42511182-42511201 None:intergenic 30.0%
! TTTTCAGATAACAGAGAAAG+AGG + Chr4:42511758-42511777 MsG0480020502.01.T01:intron 30.0%
! TTTTCTCGAAAGAATCACTA+AGG - Chr4:42519343-42519362 None:intergenic 30.0%
!! AAACCATTTTGTTGTGGAAA+TGG + Chr4:42511182-42511201 MsG0480020502.01.T01:intron 30.0%
!! AAACTTGTTGACTTGAATCA+TGG - Chr4:42512430-42512449 None:intergenic 30.0%
!! AAGCTCCTAATTTTAATCAG+AGG + Chr4:42516743-42516762 MsG0480020501.01.T01:intron 30.0%
!! ATTTTAATGCCCATCTTTTC+AGG + Chr4:42518309-42518328 MsG0480020501.01.T01:intron 30.0%
!! GTTTCGAAATTTTGAAAGGA+AGG - Chr4:42511826-42511845 None:intergenic 30.0%
!! TATACAGATAATGGATGTTG+AGG - Chr4:42514838-42514857 None:intergenic 30.0%
!! TTACACAAGATGTTGTTTCT+AGG - Chr4:42518638-42518657 None:intergenic 30.0%
!! TTGCTGAGAACTTTAGAATA+AGG + Chr4:42514660-42514679 MsG0480020502.01.T01:intron 30.0%
!! TTTAGTTTCTTTTGAGGGTT+TGG + Chr4:42515497-42515516 MsG0480020502.01.T01:intron 30.0%
!!! AACGATCCACATTTTAAGTT+TGG + Chr4:42519612-42519631 MsG0480020501.01.T01:intron 30.0%
!!! AATGAGTTTGATCCGTTTTT+TGG - Chr4:42511448-42511467 None:intergenic 30.0%
!!! ATATTTTTTTTGTGGTGGCT+AGG + Chr4:42512873-42512892 MsG0480020502.01.T01:intron 30.0%
!!! TAAACTGTTTTTGTTGGACT+AGG - Chr4:42510632-42510651 None:intergenic 30.0%
!!! TGTTTTTGATTTTGCTTGTG+TGG - Chr4:42511564-42511583 None:intergenic 30.0%
AAACCATTTCCACAGCAAAA+TGG - Chr4:42511145-42511164 None:intergenic 35.0%
AAATAGGAAGATGACTGCAA+AGG + Chr4:42517540-42517559 MsG0480020501.01.T01:CDS 35.0%
ACAGTCCTTAACATGTATCA+AGG - Chr4:42514430-42514449 None:intergenic 35.0%
ACTATGTTCCAACATGTTTC+AGG + Chr4:42513922-42513941 MsG0480020502.01.T01:intron 35.0%
AGAATTACTACTTCTCTCTG+TGG + Chr4:42517963-42517982 MsG0480020501.01.T01:CDS 35.0%
AGGGAGTAATTGGATATGTT+TGG + Chr4:42514135-42514154 MsG0480020502.01.T01:intron 35.0%
ATCATGATAATTGCTCTCTG+TGG + Chr4:42519016-42519035 MsG0480020501.01.T01:intron 35.0%
ATCCAATGGTAAAAACCGAA+TGG + Chr4:42515401-42515420 MsG0480020502.01.T01:intron 35.0%
ATCGTTGTTCTCTTTATGAG+TGG + Chr4:42510416-42510435 MsG0480020502.01.T01:exon 35.0%
ATGTAAGTAGTGCTTAGTTC+CGG - Chr4:42520036-42520055 None:intergenic 35.0%
ATGTTGTTAAATGGATGCCA+TGG + Chr4:42516323-42516342 MsG0480020501.01.T01:intron 35.0%
ATTTGCAACTTACACCATGA+TGG - Chr4:42518212-42518231 None:intergenic 35.0%
ATTTGGCTATTGTCACAATG+TGG + Chr4:42516460-42516479 MsG0480020501.01.T01:intron 35.0%
CAAAAACCTCACTTTCTTGA+GGG + Chr4:42519516-42519535 MsG0480020501.01.T01:intron 35.0%
CAGATAATGTTGAGCATGTT+GGG + Chr4:42515142-42515161 MsG0480020502.01.T01:intron 35.0%
CATCCCTTGTAAAAACCAAA+TGG - Chr4:42515813-42515832 None:intergenic 35.0%
CGGTAGAATTAGAAAGCAAT+TGG - Chr4:42510668-42510687 None:intergenic 35.0%
CTCGAGTCTTGGTTTAATAA+TGG - Chr4:42512334-42512353 None:intergenic 35.0%
CTGGTCATTTCCAATATTTG+AGG - Chr4:42520007-42520026 None:intergenic 35.0%
CTTATAGTAGCCTGAAAAGA+TGG - Chr4:42518322-42518341 None:intergenic 35.0%
GAATTACTACTTCTCTCTGT+GGG + Chr4:42517964-42517983 MsG0480020501.01.T01:CDS 35.0%
GATGATGAGATTGAAGATTC+TGG - Chr4:42511211-42511230 None:intergenic 35.0%
GCAGGAATCCTTTCATAAAT+TGG - Chr4:42516398-42516417 None:intergenic 35.0%
GCAGTCATCTTCCTATTTAT+TGG - Chr4:42517538-42517557 None:intergenic 35.0%
GCTACTATAAGTTATGCGAT+TGG + Chr4:42518331-42518350 MsG0480020501.01.T01:CDS 35.0%
GCTTTAATCAATAAGGGCAA+GGG - Chr4:42516279-42516298 None:intergenic 35.0%
GGTGTAGAAAGCAATTATGT+TGG - Chr4:42510557-42510576 None:intergenic 35.0%
GGTTGTTACATAATTCAACC+TGG + Chr4:42516943-42516962 MsG0480020501.01.T01:intron 35.0%
GTATCAAGGAGATACAAGAA+AGG - Chr4:42514416-42514435 None:intergenic 35.0%
GTGTAGAAAGCAATTATGCA+CGG - Chr4:42510534-42510553 None:intergenic 35.0%
GTTAAGTCCACCAATGTAAA+TGG + Chr4:42510982-42511001 MsG0480020502.01.T01:intron 35.0%
TAACTGATTAACTCGAGTCT+TGG - Chr4:42512345-42512364 None:intergenic 35.0%
TAGAATAAGGACTACACTAG+TGG + Chr4:42514673-42514692 MsG0480020502.01.T01:intron 35.0%
TAGGCAAAAAGGGTCTAATT+AGG + Chr4:42512569-42512588 MsG0480020502.01.T01:intron 35.0%
TAGTATGAACAAGCAGCAAT+TGG - Chr4:42510864-42510883 None:intergenic 35.0%
TATGATTAAAGTCGAATGGG+GGG + Chr4:42518555-42518574 MsG0480020501.01.T01:intron 35.0%
TATTTGAGGAACAGTTTCAC+TGG - Chr4:42519166-42519185 None:intergenic 35.0%
TCAAAAACCTCACTTTCTTG+AGG + Chr4:42519515-42519534 MsG0480020501.01.T01:intron 35.0%
TCAACTATCGTTTAACACGT+TGG + Chr4:42519784-42519803 MsG0480020501.01.T01:intron 35.0%
TCATGATAATTGCTCTCTGT+GGG + Chr4:42519017-42519036 MsG0480020501.01.T01:intron 35.0%
TCGTTGTTCTCTTTATGAGT+GGG + Chr4:42510417-42510436 MsG0480020502.01.T01:exon 35.0%
TCTCTCAAATGATTCGTCTT+TGG + Chr4:42515002-42515021 MsG0480020502.01.T01:intron 35.0%
TCTTTCGAGAAAACAATCAG+GGG + Chr4:42519350-42519369 MsG0480020501.01.T01:CDS 35.0%
TGCATAATATATGCAAGGTC+CGG - Chr4:42512908-42512927 None:intergenic 35.0%
TGCATTTCCATTTACATTGG+TGG - Chr4:42510992-42511011 None:intergenic 35.0%
TGCCAATGACATGAAAACAT+AGG - Chr4:42517062-42517081 None:intergenic 35.0%
TGTATGTAGAAAAAGCGGTT+GGG - Chr4:42516175-42516194 None:intergenic 35.0%
TTAAACAAATCTGACGGTTG+TGG + Chr4:42512159-42512178 MsG0480020502.01.T01:intron 35.0%
TTAAACCAGTACTACATGTG+TGG + Chr4:42518928-42518947 MsG0480020501.01.T01:intron 35.0%
TTAATCCACACATGTAGTAC+TGG - Chr4:42518936-42518955 None:intergenic 35.0%
TTAGGTTCTTCGATTAAAGC+TGG + Chr4:42515056-42515075 MsG0480020502.01.T01:intron 35.0%
TTATGTTAAAAAAGGGCCTC+TGG + Chr4:42516709-42516728 MsG0480020501.01.T01:intron 35.0%
TTCCCTACATCCTCAAATAT+TGG + Chr4:42519994-42520013 MsG0480020501.01.T01:three_prime_UTR 35.0%
TTGGGAAAGGAGAAAATGAA+GGG - Chr4:42516157-42516176 None:intergenic 35.0%
TTTATGGGTGAAGAAGTTCT+TGG - Chr4:42514970-42514989 None:intergenic 35.0%
TTTGAAAGGAAGGACAAGAT+AGG - Chr4:42511816-42511835 None:intergenic 35.0%
! AAAAACAAGGCTTTTGCATG+AGG + Chr4:42516550-42516569 MsG0480020501.01.T01:intron 35.0%
! AATTGGTTGGTATTCACCTT+AGG - Chr4:42510934-42510953 None:intergenic 35.0%
! ACTCCAAAACCATTTTGTTG+TGG + Chr4:42511176-42511195 MsG0480020502.01.T01:intron 35.0%
! AGCTTTAATCAATAAGGGCA+AGG - Chr4:42516280-42516299 None:intergenic 35.0%
! AGTAAAGCGCTTTCAAGAAA+GGG - Chr4:42519762-42519781 None:intergenic 35.0%
! CGAATGGATTTCAGAAATTC+TGG + Chr4:42517219-42517238 MsG0480020501.01.T01:intron 35.0%
! TAAGCAAAACCATTTTGCTG+TGG + Chr4:42511133-42511152 MsG0480020502.01.T01:intron 35.0%
! TAGGTCTTAAGTTGTAAACG+AGG + Chr4:42514634-42514653 MsG0480020502.01.T01:intron 35.0%
! TAGTAAAGCGCTTTCAAGAA+AGG - Chr4:42519763-42519782 None:intergenic 35.0%
! TGGTTTAACTTTCACCATCA+TGG + Chr4:42518195-42518214 MsG0480020501.01.T01:intron 35.0%
! TGTCAACTAAGTTGAGATCT+CGG + Chr4:42515604-42515623 MsG0480020502.01.T01:intron 35.0%
! TGTGTTTGGTTTCTTTGATC+AGG + Chr4:42517397-42517416 MsG0480020501.01.T01:intron 35.0%
! TTGTTGGACTAGGTGTTAAT+GGG - Chr4:42510622-42510641 None:intergenic 35.0%
! TTTCCACAGCAAAATGGTTT+TGG - Chr4:42511139-42511158 None:intergenic 35.0%
! TTTGTTGGACTAGGTGTTAA+TGG - Chr4:42510623-42510642 None:intergenic 35.0%
!! AAACCATTTTGCTGTGGAAA+TGG + Chr4:42511139-42511158 MsG0480020502.01.T01:intron 35.0%
!! AGTATTGAGCGTGTAAGTTT+TGG + Chr4:42517338-42517357 MsG0480020501.01.T01:intron 35.0%
!! CTTGAGACTAGCTTACTTAT+CGG - Chr4:42512983-42513002 None:intergenic 35.0%
!! CTTTTAGGTAAGTTGTGATG+TGG - Chr4:42512534-42512553 None:intergenic 35.0%
!!! AATGGTATGGCGGATTTTTT+TGG + Chr4:42516360-42516379 MsG0480020501.01.T01:intron 35.0%
!!! CATGCAAAAGCCTTGTTTTT+GGG - Chr4:42516550-42516569 None:intergenic 35.0%
!!! CTTGATAGTTTTTTCCGTAC+AGG + Chr4:42518014-42518033 MsG0480020501.01.T01:intron 35.0%
!!! TCATGCAAAAGCCTTGTTTT+TGG - Chr4:42516551-42516570 None:intergenic 35.0%
AAACATGGAAACGTACGATG+AGG - Chr4:42513251-42513270 None:intergenic 40.0%
AAAGCAATTGGGGTGTAGAA+AGG - Chr4:42510656-42510675 None:intergenic 40.0%
AAAGTCCATAAATTGCTGCC+GGG - Chr4:42519412-42519431 None:intergenic 40.0%
AAAGTGTGTTCTGCTGAACA+TGG - Chr4:42519975-42519994 None:intergenic 40.0%
AACATGGAAACGTACGATGA+GGG - Chr4:42513250-42513269 None:intergenic 40.0%
ACAACCAGTTTCAATGACAC+AGG + Chr4:42510700-42510719 MsG0480020502.01.T01:intron 40.0%
ACAACCTTGCTTCAAAGCTT+TGG - Chr4:42514481-42514500 None:intergenic 40.0%
ACAGCATAGATGGATAGAAC+GGG - Chr4:42516075-42516094 None:intergenic 40.0%
ACATGCTCAACATTATCTGG+AGG - Chr4:42515141-42515160 None:intergenic 40.0%
ACCTTTGAGCTAGTAAAGCA+AGG + Chr4:42516627-42516646 MsG0480020501.01.T01:intron 40.0%
ACGCGCGCTTTATCTTATTA+AGG + Chr4:42514021-42514040 MsG0480020502.01.T01:intron 40.0%
ACGTCTCTAACTGTGTTTCA+GGG - Chr4:42515218-42515237 None:intergenic 40.0%
AGAACATACTGAGTCAAGAG+AGG - Chr4:42517820-42517839 None:intergenic 40.0%
AGAAGGACCTTGAACTTCTT+AGG + Chr4:42515272-42515291 MsG0480020502.01.T01:intron 40.0%
AGAGTTTGACTGTACATGAG+TGG + Chr4:42513090-42513109 MsG0480020502.01.T01:intron 40.0%
AGCAAAACATACATGCCTTG+AGG - Chr4:42517869-42517888 None:intergenic 40.0%
AGCAGAGAGATACTATTGTC+GGG + Chr4:42513142-42513161 MsG0480020502.01.T01:intron 40.0%
AGCTCTTAGTGATGAAACAG+AGG - Chr4:42516201-42516220 None:intergenic 40.0%
AGTACCCAAGAGTGGTTATT+AGG + Chr4:42517499-42517518 MsG0480020501.01.T01:CDS 40.0%
ATCGTTCGATCTTGATCCAA+CGG - Chr4:42519598-42519617 None:intergenic 40.0%
ATCTACGATGCTTCACGATT+TGG - Chr4:42511707-42511726 None:intergenic 40.0%
ATGCTCAACATTATCTGGAG+GGG - Chr4:42515139-42515158 None:intergenic 40.0%
ATTTGGAAGGAGGTTTGAAC+TGG - Chr4:42511690-42511709 None:intergenic 40.0%
CAAAGTCCATAAATTGCTGC+CGG - Chr4:42519413-42519432 None:intergenic 40.0%
CAACCAGTTTCAATGACACA+GGG + Chr4:42510701-42510720 MsG0480020502.01.T01:intron 40.0%
CAATCCAAAGAAACTGAACG+CGG + Chr4:42517764-42517783 MsG0480020501.01.T01:intron 40.0%
CAATCTCATCATCACTGTAC+CGG + Chr4:42511218-42511237 MsG0480020502.01.T01:CDS 40.0%
CAATGCCCAACAAATAGAAC+AGG + Chr4:42517275-42517294 MsG0480020501.01.T01:CDS 40.0%
CAATGGTAAAAACCGAATGG+TGG + Chr4:42515404-42515423 MsG0480020502.01.T01:intron 40.0%
CACAGCATAGATGGATAGAA+CGG - Chr4:42516076-42516095 None:intergenic 40.0%
CATAATATATGCAAGGTCCG+GGG - Chr4:42512906-42512925 None:intergenic 40.0%
CATGCTCAACATTATCTGGA+GGG - Chr4:42515140-42515159 None:intergenic 40.0%
CATGTTGATACAAGAGCTGA+AGG - Chr4:42519131-42519150 None:intergenic 40.0%
CCAACATGCTCAACATTATC+TGG - Chr4:42515144-42515163 None:intergenic 40.0%
CCACTCTTCAAACCCAAAAA+AGG + Chr4:42516922-42516941 MsG0480020501.01.T01:intron 40.0%
CCAGATAATGTTGAGCATGT+TGG + Chr4:42515141-42515160 MsG0480020502.01.T01:intron 40.0%
CCCTCTCTCATACCAAAAAA+CGG + Chr4:42511433-42511452 MsG0480020502.01.T01:intron 40.0%
CCTTTGAGCTAGTAAAGCAA+GGG + Chr4:42516628-42516647 MsG0480020501.01.T01:intron 40.0%
CGTACAATACACCAATCGAT+GGG + Chr4:42518676-42518695 MsG0480020501.01.T01:intron 40.0%
CGTTGTTCTCTTTATGAGTG+GGG + Chr4:42510418-42510437 MsG0480020502.01.T01:exon 40.0%
CTAAATCCCTCAAGAAAGTG+AGG - Chr4:42519525-42519544 None:intergenic 40.0%
CTCAGCCTTCAAAATTCTTC+TGG - Chr4:42519931-42519950 None:intergenic 40.0%
CTCTTAGTGATGAAACAGAG+GGG - Chr4:42516199-42516218 None:intergenic 40.0%
CTGGTTGTTGATATTGTCAG+CGG - Chr4:42510688-42510707 None:intergenic 40.0%
GAAGTTTGAGAGAAAGGAGA+GGG + Chr4:42512048-42512067 MsG0480020502.01.T01:intron 40.0%
GACAAGAAAGTAAATGGCAC+AGG - Chr4:42514764-42514783 None:intergenic 40.0%
GAGCAGAGAGATACTATTGT+CGG + Chr4:42513141-42513160 MsG0480020502.01.T01:intron 40.0%
GAGGGTTTGAATTGTGTTTC+TGG - Chr4:42511418-42511437 None:intergenic 40.0%
GAGTTTGACTGTACATGAGT+GGG + Chr4:42513091-42513110 MsG0480020502.01.T01:intron 40.0%
GATACGATGTTTCAACATCC+TGG + Chr4:42513963-42513982 MsG0480020502.01.T01:intron 40.0%
GATTAAGAATACGTCCCAAG+AGG + Chr4:42515185-42515204 MsG0480020502.01.T01:intron 40.0%
GCAATAGCGTGTTTATATGG+CGG + Chr4:42516437-42516456 MsG0480020501.01.T01:intron 40.0%
GCAGCAATAGCGTGTTTATA+TGG + Chr4:42516434-42516453 MsG0480020501.01.T01:intron 40.0%
GCATAATATATGCAAGGTCC+GGG - Chr4:42512907-42512926 None:intergenic 40.0%
GCTCTTAGTGATGAAACAGA+GGG - Chr4:42516200-42516219 None:intergenic 40.0%
GGACAAGATAGGACGTAAAT+CGG - Chr4:42511805-42511824 None:intergenic 40.0%
GGCAGCAATTTATGGACTTT+GGG + Chr4:42519412-42519431 MsG0480020501.01.T01:CDS 40.0%
GTAGACAAACATCCCAAACA+TGG - Chr4:42519851-42519870 None:intergenic 40.0%
GTATAGCACTTTCATCTCCA+AGG + Chr4:42519378-42519397 MsG0480020501.01.T01:CDS 40.0%
GTCACCTAATAACCACTCTT+GGG - Chr4:42517506-42517525 None:intergenic 40.0%
GTGACAAACACATCTACTCT+GGG - Chr4:42514721-42514740 None:intergenic 40.0%
GTGCAAACAGACATGAAACA+GGG - Chr4:42514003-42514022 None:intergenic 40.0%
GTGTATGTAGAAAAAGCGGT+TGG - Chr4:42516176-42516195 None:intergenic 40.0%
GTTAACAACAGAACGCTAAC+TGG - Chr4:42519254-42519273 None:intergenic 40.0%
GTTGGGAAAGGAGAAAATGA+AGG - Chr4:42516158-42516177 None:intergenic 40.0%
GTTGGTCGTTGGATCAAAAT+CGG - Chr4:42519688-42519707 None:intergenic 40.0%
GTTGTTCTCTTTATGAGTGG+GGG + Chr4:42510419-42510438 MsG0480020502.01.T01:exon 40.0%
GTTTAACGTTTCAGATCTGC+TGG - Chr4:42512145-42512164 None:intergenic 40.0%
TACCAACTAAGCTAAGCTCA+CGG + Chr4:42512935-42512954 MsG0480020502.01.T01:intron 40.0%
TACTAGCTCAAAGGTTGGAT+CGG - Chr4:42516622-42516641 None:intergenic 40.0%
TAGCACACAATAGCATTGCA+GGG + Chr4:42516596-42516615 MsG0480020501.01.T01:intron 40.0%
TCATCGTACGTTTCCATGTT+TGG + Chr4:42513250-42513269 MsG0480020502.01.T01:intron 40.0%
TCCTAAAACACTCGATCCAA+TGG + Chr4:42515387-42515406 MsG0480020502.01.T01:intron 40.0%
TCGCACCTGTTCTATTTGTT+GGG - Chr4:42517283-42517302 None:intergenic 40.0%
TCTCTTTGACCGAGTAATCA+AGG + Chr4:42516491-42516510 MsG0480020501.01.T01:intron 40.0%
TCTTAGTGATGAAACAGAGG+GGG - Chr4:42516198-42516217 None:intergenic 40.0%
TGAAGTTTGAGAGAAAGGAG+AGG + Chr4:42512047-42512066 MsG0480020502.01.T01:intron 40.0%
TGACAAACACATCTACTCTG+GGG - Chr4:42514720-42514739 None:intergenic 40.0%
TGCTTTACTAGCTCAAAGGT+TGG - Chr4:42516627-42516646 None:intergenic 40.0%
TGGGAAAGGAGAAAATGAAG+GGG - Chr4:42516156-42516175 None:intergenic 40.0%
TGGTTGTAGGATAGTGAGAT+GGG + Chr4:42514564-42514583 MsG0480020502.01.T01:intron 40.0%
TGTCACCTAATAACCACTCT+TGG - Chr4:42517507-42517526 None:intergenic 40.0%
TTAGCACACAATAGCATTGC+AGG + Chr4:42516595-42516614 MsG0480020501.01.T01:intron 40.0%
TTATGAAAGGATTCCTGCCA+TGG + Chr4:42516400-42516419 MsG0480020501.01.T01:intron 40.0%
TTATGCAGTCAGAACATCGT+TGG - Chr4:42519706-42519725 None:intergenic 40.0%
TTCCTTATGCACCATGCATA+AGG - Chr4:42512188-42512207 None:intergenic 40.0%
TTCGCACCTGTTCTATTTGT+TGG - Chr4:42517284-42517303 None:intergenic 40.0%
TTGGTTGTAGGATAGTGAGA+TGG + Chr4:42514563-42514582 MsG0480020502.01.T01:intron 40.0%
TTTAGTGAGTGGTGTAGATG+AGG + Chr4:42517122-42517141 MsG0480020501.01.T01:intron 40.0%
! AACTTTCAAGTACCCAAGAG+TGG + Chr4:42517491-42517510 MsG0480020501.01.T01:CDS 40.0%
! ACCATTGGATCGAGTGTTTT+AGG - Chr4:42515391-42515410 None:intergenic 40.0%
! ACTCCAAAACCATTTTGCTG+TGG + Chr4:42511285-42511304 MsG0480020502.01.T01:CDS 40.0%
! AGCTTTAACCATTAGACCAG+AGG - Chr4:42516728-42516747 None:intergenic 40.0%
! AGGAGAAAATGAAGGGGTTT+TGG - Chr4:42516150-42516169 None:intergenic 40.0%
! ATGCCAAAACCATTTTGCTG+TGG + Chr4:42511242-42511261 MsG0480020502.01.T01:CDS 40.0%
! CACCATTCGGTTTTTACCAT+TGG - Chr4:42515406-42515425 None:intergenic 40.0%
! GAGAAAATGAAGGGGTTTTG+GGG - Chr4:42516148-42516167 None:intergenic 40.0%
! GGAGAAAATGAAGGGGTTTT+GGG - Chr4:42516149-42516168 None:intergenic 40.0%
! TGAGCTTAGCTTAGTTGGTA+AGG - Chr4:42512935-42512954 None:intergenic 40.0%
! TGTTTCTGCTGAGAGCTAAT+TGG + Chr4:42517085-42517104 MsG0480020501.01.T01:intron 40.0%
! TTAAGTTTAAGATTCCGGCG+CGG + Chr4:42511943-42511962 MsG0480020502.01.T01:intron 40.0%
! TTCGTGTTTTGTAGATCAGC+TGG + Chr4:42514209-42514228 MsG0480020502.01.T01:intron 40.0%
! TTGCTTCAAAGCTTTGGTGT+AGG - Chr4:42514475-42514494 None:intergenic 40.0%
! TTTGAAACAGGGATGAGAAG+AGG + Chr4:42511900-42511919 MsG0480020502.01.T01:intron 40.0%
!! AAGAATTTTGAAGGCTGAGG+TGG + Chr4:42519932-42519951 MsG0480020501.01.T01:exon 40.0%
!! ACACTAGTGGATTTCCTTTC+TGG + Chr4:42514686-42514705 MsG0480020502.01.T01:intron 40.0%
!! CAGAAGAATTTTGAAGGCTG+AGG + Chr4:42519929-42519948 MsG0480020501.01.T01:exon 40.0%
!! CATTCGCTTATCCCTTGTTT+TGG + Chr4:42519273-42519292 MsG0480020501.01.T01:CDS 40.0%
!! TACACCAAAGCTTTGAAGCA+AGG + Chr4:42514474-42514493 MsG0480020502.01.T01:CDS 40.0%
!! TCAAGGTCCTTCTGAAGTAT+CGG - Chr4:42515265-42515284 None:intergenic 40.0%
!!! CAACGACTTGTTGGATTTTC+AGG + Chr4:42519457-42519476 MsG0480020501.01.T01:CDS 40.0%
!!! CCGTTTTTTGGTATGAGAGA+GGG - Chr4:42511436-42511455 None:intergenic 40.0%
!!! CCTTTTTTGGGTTTGAAGAG+TGG - Chr4:42516925-42516944 None:intergenic 40.0%
!!! GCAAAATGGTTTTGGCATTC+CGG - Chr4:42511240-42511259 None:intergenic 40.0%
!!! TCCGTTTTTTGGTATGAGAG+AGG - Chr4:42511437-42511456 None:intergenic 40.0%
!!! TGAAAGCCGATTTGTGGTTT+TGG - Chr4:42511665-42511684 None:intergenic 40.0%
AAAAAGGGCCTCTGGTCTAA+TGG + Chr4:42516717-42516736 MsG0480020501.01.T01:intron 45.0%
AAACACGCTATTGCTGCCTA+TGG - Chr4:42516431-42516450 None:intergenic 45.0%
AATCAAGGTAGCTGAGCATG+AGG + Chr4:42516506-42516525 MsG0480020501.01.T01:intron 45.0%
AATTCTCGGTTGGAACCTGT+AGG + Chr4:42510449-42510468 MsG0480020502.01.T01:CDS 45.0%
ACAAACATCCCAAACATGGC+TGG - Chr4:42519847-42519866 None:intergenic 45.0%
ACCAACTAAGCTAAGCTCAC+GGG + Chr4:42512936-42512955 MsG0480020502.01.T01:intron 45.0%
AGACGAAGTTGAGAGAAGAG+AGG - Chr4:42511377-42511396 None:intergenic 45.0%
AGATGTATTGCGCATTTGCG+TGG - Chr4:42512684-42512703 None:intergenic 45.0%
AGATGTGTTTGTCACCGAAC+TGG + Chr4:42514726-42514745 MsG0480020502.01.T01:intron 45.0%
AGTCGGTAACACTTACCTCA+AGG + Chr4:42517851-42517870 MsG0480020501.01.T01:intron 45.0%
AGTGTTAGCAACACACTCTG+TGG + Chr4:42516766-42516785 MsG0480020501.01.T01:intron 45.0%
ATTAGCCAAGGGAGTGAGTA+GGG + Chr4:42516034-42516053 MsG0480020502.01.T01:intron 45.0%
CAAGGTCGTGACTGCATTAA+TGG - Chr4:42519571-42519590 None:intergenic 45.0%
CACCTCAAGTCCCAAAAACA+AGG + Chr4:42516537-42516556 MsG0480020501.01.T01:intron 45.0%
CAGAGATGCCTGAAACATGT+TGG - Chr4:42513933-42513952 None:intergenic 45.0%
CAGGCATCTCTGTAAGATGT+TGG + Chr4:42513941-42513960 MsG0480020502.01.T01:intron 45.0%
CATAACTTCAGCCTCAGAGA+TGG + Chr4:42512221-42512240 MsG0480020502.01.T01:intron 45.0%
CATTAATGCAGTCACGACCT+TGG + Chr4:42519569-42519588 MsG0480020501.01.T01:intron 45.0%
CCAAACACAGAATTCGCAAC+TGG - Chr4:42517386-42517405 None:intergenic 45.0%
CCAGTTGCGAATTCTGTGTT+TGG + Chr4:42517383-42517402 MsG0480020501.01.T01:intron 45.0%
CCATTAAGCATGCACACGAA+GGG - Chr4:42512119-42512138 None:intergenic 45.0%
CCCTTGCTTTACTAGCTCAA+AGG - Chr4:42516631-42516650 None:intergenic 45.0%
CCTTCGTGTGCATGCTTAAT+GGG + Chr4:42512117-42512136 MsG0480020502.01.T01:intron 45.0%
CGGCAGCAATTTATGGACTT+TGG + Chr4:42519411-42519430 MsG0480020501.01.T01:CDS 45.0%
CGTGCAAACAGACATGAAAC+AGG - Chr4:42514004-42514023 None:intergenic 45.0%
CTACTTCTCTCTGTGGGTAT+TGG + Chr4:42517970-42517989 MsG0480020501.01.T01:intron 45.0%
CTCACATCGTTTGCCAAACA+TGG - Chr4:42513266-42513285 None:intergenic 45.0%
CTTCGTGTGCATGCTTAATG+GGG + Chr4:42512118-42512137 MsG0480020502.01.T01:intron 45.0%
GACGTCTCTAACTGTGTTTC+AGG - Chr4:42515219-42515238 None:intergenic 45.0%
GAGAAAACAATCAGGGGTAG+TGG + Chr4:42519356-42519375 MsG0480020501.01.T01:CDS 45.0%
GATGTGTTTGTCACCGAACT+GGG + Chr4:42514727-42514746 MsG0480020502.01.T01:intron 45.0%
GATGTTTCAACATCCTGGCA+CGG + Chr4:42513968-42513987 MsG0480020502.01.T01:intron 45.0%
GATTAAAGCTGGTCCAAGCT+AGG + Chr4:42515067-42515086 MsG0480020502.01.T01:CDS 45.0%
GCAATTATGCACGGTGCATA+AGG - Chr4:42510525-42510544 None:intergenic 45.0%
GCGCTTTCAAGAAAGGGATT+TGG - Chr4:42519756-42519775 None:intergenic 45.0%
GCGTACAATACACCAATCGA+TGG + Chr4:42518675-42518694 MsG0480020501.01.T01:intron 45.0%
GCTCAGCTACCTTGATTACT+CGG - Chr4:42516503-42516522 None:intergenic 45.0%
GGAAGATGACTGCAAAGGTA+TGG + Chr4:42517545-42517564 MsG0480020501.01.T01:CDS 45.0%
GGAGAGTTGTTAACCCAGTT+CGG - Chr4:42514743-42514762 None:intergenic 45.0%
GGTGACAAACACATCTACTC+TGG - Chr4:42514722-42514741 None:intergenic 45.0%
GTAGAAAAAGCGGTTGGGAA+AGG - Chr4:42516170-42516189 None:intergenic 45.0%
GTCCTTATGCATGGTGCATA+AGG + Chr4:42512183-42512202 MsG0480020502.01.T01:intron 45.0%
GTGTTAGCAACACACTCTGT+GGG + Chr4:42516767-42516786 MsG0480020501.01.T01:intron 45.0%
GTTGTTGTCACGTGACTGAA+AGG + Chr4:42518598-42518617 MsG0480020501.01.T01:intron 45.0%
TAGCAAAGTCACACCTAGCT+TGG - Chr4:42515083-42515102 None:intergenic 45.0%
TATTAGCCAAGGGAGTGAGT+AGG + Chr4:42516033-42516052 MsG0480020502.01.T01:intron 45.0%
TCACCTGCCTAAGAAGTTCA+AGG - Chr4:42515282-42515301 None:intergenic 45.0%
TCCACGTTCTCATATCTTGC+TGG + Chr4:42514046-42514065 MsG0480020502.01.T01:intron 45.0%
TCTCAGATCTAGGAGTTCCT+AGG + Chr4:42514588-42514607 MsG0480020502.01.T01:intron 45.0%
TGAGATGGGATCTCAGATCT+AGG + Chr4:42514578-42514597 MsG0480020502.01.T01:intron 45.0%
TGCTCAACATTATCTGGAGG+GGG - Chr4:42515138-42515157 None:intergenic 45.0%
TGGAAATGGTTTCTGCGAGT+TGG + Chr4:42511262-42511281 MsG0480020502.01.T01:CDS 45.0%
TTCGCAACTGGATTCGTACA+AGG - Chr4:42517374-42517393 None:intergenic 45.0%
TTGACCGCGTTCAGTTTCTT+TGG - Chr4:42517771-42517790 None:intergenic 45.0%
! AACAAGGCTTTTGCATGAGG+TGG + Chr4:42516553-42516572 MsG0480020501.01.T01:intron 45.0%
! ACGATGCTTCACGATTTGGA+AGG - Chr4:42511703-42511722 None:intergenic 45.0%
! ATAATCACAGGCGCTGTGAT+TGG + Chr4:42514544-42514563 MsG0480020502.01.T01:intron 45.0%
! ATGCCCTGTGTCATTGAAAC+TGG - Chr4:42510707-42510726 None:intergenic 45.0%
! ATGCTTCACGATTTGGAAGG+AGG - Chr4:42511700-42511719 None:intergenic 45.0%
! GGGGGTGTATGTAGAAAAAG+CGG - Chr4:42516180-42516199 None:intergenic 45.0%
! GGTATTGGATTGGGTTGTAG+CGG + Chr4:42517985-42518004 MsG0480020501.01.T01:intron 45.0%
! GGTGGACTTAACACTGAGTT+CGG - Chr4:42510974-42510993 None:intergenic 45.0%
! GTGTTTTGTAGATCAGCTGG+AGG + Chr4:42514212-42514231 MsG0480020502.01.T01:intron 45.0%
! TTCAGCCTCAGAGATGGATT+CGG + Chr4:42512227-42512246 MsG0480020502.01.T01:intron 45.0%
!! AGTGGATTTCCTTTCTGGCT+TGG + Chr4:42514691-42514710 MsG0480020502.01.T01:intron 45.0%
!! CATCTCTGAGGCTGAAGTTA+TGG - Chr4:42512223-42512242 None:intergenic 45.0%
!! CTCTCTGTGGGTATTGGATT+GGG + Chr4:42517976-42517995 MsG0480020501.01.T01:intron 45.0%
!! CTGGTTTGAAAGCCGATTTG+TGG - Chr4:42511671-42511690 None:intergenic 45.0%
!! GCGTGTTTATATGGCGGATT+TGG + Chr4:42516443-42516462 MsG0480020501.01.T01:intron 45.0%
!! TCTCTCTGTGGGTATTGGAT+TGG + Chr4:42517975-42517994 MsG0480020501.01.T01:intron 45.0%
!! TGCCTACAAATTTGTTGGGC+CGG + Chr4:42516885-42516904 MsG0480020501.01.T01:intron 45.0%
!!! AGCCTTGTTTTTGGGACTTG+AGG - Chr4:42516542-42516561 None:intergenic 45.0%
!!! AGGGGTTTTGGGGAATTGAA+AGG - Chr4:42516138-42516157 None:intergenic 45.0%
!!! TGTTTTTGGGACTTGAGGTG+AGG - Chr4:42516537-42516556 None:intergenic 45.0%
!!! TATATATAATATTTTTTTTG+TGG + Chr4:42512865-42512884 MsG0480020502.01.T01:intron 5.0%
!!! TTATTTAAGTTAATATATTT+TGG + Chr4:42510795-42510814 MsG0480020502.01.T01:intron 5.0%
AACGTACGATGAGGGACATG+TGG - Chr4:42513242-42513261 None:intergenic 50.0%
ACACCTACACTGGATCCTAC+AGG - Chr4:42510467-42510486 None:intergenic 50.0%
ACATGCCGAATCCATCTCTG+AGG - Chr4:42512235-42512254 None:intergenic 50.0%
ACCAGTCCAGACTTCAACCT+AGG - Chr4:42514608-42514627 None:intergenic 50.0%
ACGGTTGCCGATACTTCAGA+AGG + Chr4:42515255-42515274 MsG0480020502.01.T01:intron 50.0%
ACTAAAGCTCCTGCATACGC+AGG - Chr4:42518716-42518735 None:intergenic 50.0%
AGCTTGTGCCAGCCATGTTT+GGG + Chr4:42519836-42519855 MsG0480020501.01.T01:intron 50.0%
ATCTCCAAGGCTTGTGATCC+CGG + Chr4:42519391-42519410 MsG0480020501.01.T01:CDS 50.0%
CACCGGCCCAACAAATTTGT+AGG - Chr4:42516890-42516909 None:intergenic 50.0%
CAGTGTAGGTGTCAGAGATG+GGG + Chr4:42510475-42510494 MsG0480020502.01.T01:intron 50.0%
CCAGTGTAGGTGTCAGAGAT+GGG + Chr4:42510474-42510493 MsG0480020502.01.T01:intron 50.0%
CCCATTAAGCATGCACACGA+AGG - Chr4:42512120-42512139 None:intergenic 50.0%
CCCTTCGTGTGCATGCTTAA+TGG + Chr4:42512116-42512135 MsG0480020502.01.T01:intron 50.0%
CTAAAGCTCCTGCATACGCA+GGG - Chr4:42518715-42518734 None:intergenic 50.0%
GAACCTGTAGGATCCAGTGT+AGG + Chr4:42510461-42510480 MsG0480020502.01.T01:CDS 50.0%
GACAGTTGAGTTTCCGGTGA+CGG - Chr4:42511974-42511993 None:intergenic 50.0%
GCCAGCAAGATATGAGAACG+TGG - Chr4:42514050-42514069 None:intergenic 50.0%
GGACCTTGAACTTCTTAGGC+AGG + Chr4:42515276-42515295 MsG0480020502.01.T01:intron 50.0%
GGGTGGAACAAATTCTCGGT+TGG + Chr4:42510439-42510458 MsG0480020502.01.T01:CDS 50.0%
GGGTGTGGTTATGGTGCATA+AGG + Chr4:42510495-42510514 MsG0480020502.01.T01:intron 50.0%
GGTCTTGGACTTGAGTCACA+TGG - Chr4:42512481-42512500 None:intergenic 50.0%
GGTTGTGGTGTCCTTATGCA+TGG + Chr4:42512174-42512193 MsG0480020502.01.T01:intron 50.0%
GTACAGATATGCGCGTTGCT+TGG - Chr4:42514072-42514091 None:intergenic 50.0%
GTCAGAACATCGTTGGTCGT+TGG - Chr4:42519699-42519718 None:intergenic 50.0%
GTGATCCCGGCAGCAATTTA+TGG + Chr4:42519404-42519423 MsG0480020501.01.T01:CDS 50.0%
GTGGGGGTGGAACAAATTCT+CGG + Chr4:42510435-42510454 MsG0480020502.01.T01:CDS 50.0%
GTTCTCTTTATGAGTGGGGG+TGG + Chr4:42510422-42510441 MsG0480020502.01.T01:exon 50.0%
TCACGTGACTGAAAGGTCAC+AGG + Chr4:42518605-42518624 MsG0480020501.01.T01:intron 50.0%
TCAGAGATGGGGTGTGGTTA+TGG + Chr4:42510486-42510505 MsG0480020502.01.T01:intron 50.0%
TCCAGTGTAGGTGTCAGAGA+TGG + Chr4:42510473-42510492 MsG0480020502.01.T01:intron 50.0%
TCCCGTGAGCTTAGCTTAGT+TGG - Chr4:42512940-42512959 None:intergenic 50.0%
TCTTGATCCAACGGCTACCA+AGG - Chr4:42519589-42519608 None:intergenic 50.0%
TGAAAGGATTCCTGCCATGG+TGG + Chr4:42516403-42516422 MsG0480020501.01.T01:intron 50.0%
TGGAAATGACCAGCTGCATC+CGG + Chr4:42520014-42520033 MsG0480020501.01.T01:three_prime_UTR 50.0%
TTAAGCATGCACACGAAGGG+AGG - Chr4:42512116-42512135 None:intergenic 50.0%
TTCAGGGTCACTCTCCTCTT+GGG - Chr4:42515202-42515221 None:intergenic 50.0%
TTTCAGGGTCACTCTCCTCT+TGG - Chr4:42515203-42515222 None:intergenic 50.0%
! ACATTTGACTTAGGGCAGCC+CGG - Chr4:42518742-42518761 None:intergenic 50.0%
! AGATGGATTCGGCATGTGCA+GGG + Chr4:42512238-42512257 MsG0480020502.01.T01:intron 50.0%
! ATGCAGGAGCTTTAGTGCAC+CGG + Chr4:42518720-42518739 MsG0480020501.01.T01:intron 50.0%
! ATGCGATTGGGGTCCTTTTC+AGG + Chr4:42518344-42518363 MsG0480020501.01.T01:CDS 50.0%
! GGAGTTCCTAGGTTGAAGTC+TGG + Chr4:42514599-42514618 MsG0480020502.01.T01:intron 50.0%
! TCCTAGGTTGAAGTCTGGAC+TGG + Chr4:42514604-42514623 MsG0480020502.01.T01:intron 50.0%
! TGGACTAGGTGTTAATGGGC+TGG - Chr4:42510618-42510637 None:intergenic 50.0%
!! AGGTTGAAGTCTGGACTGGT+AGG + Chr4:42514608-42514627 MsG0480020502.01.T01:intron 50.0%
!! AGTCTGGACTGGTAGGTCTT+AGG + Chr4:42514615-42514634 MsG0480020502.01.T01:intron 50.0%
!! GGTGTTGCTCAACCACCATT+CGG - Chr4:42515419-42515438 None:intergenic 50.0%
AACATGGCTGGCACAAGCTG+AGG - Chr4:42519835-42519854 None:intergenic 55.0%
AAGGGAGTGAGTAGGGTGAG+GGG + Chr4:42516041-42516060 MsG0480020502.01.T01:intron 55.0%
ACATGGCTGGCACAAGCTGA+GGG - Chr4:42519834-42519853 None:intergenic 55.0%
ACCGCCAAGGTGGAATGGTA+TGG + Chr4:42516347-42516366 MsG0480020501.01.T01:intron 55.0%
ACCGGAAACTCAACTGTCGC+CGG + Chr4:42511976-42511995 MsG0480020502.01.T01:intron 55.0%
ATTCGGCATGTGCAGGGGTA+GGG + Chr4:42512244-42512263 MsG0480020502.01.T01:intron 55.0%
CAAGGGAGTGAGTAGGGTGA+GGG + Chr4:42516040-42516059 MsG0480020502.01.T01:intron 55.0%
CAGCTTGTGCCAGCCATGTT+TGG + Chr4:42519835-42519854 MsG0480020501.01.T01:intron 55.0%
CCATCTATGCTGTGCTGCCA+TGG + Chr4:42516082-42516101 MsG0480020502.01.T01:intron 55.0%
CCATGGCAGCACAGCATAGA+TGG - Chr4:42516085-42516104 None:intergenic 55.0%
CCCATCTCTGACACCTACAC+TGG - Chr4:42510477-42510496 None:intergenic 55.0%
GCCAAGGTGGAATGGTATGG+CGG + Chr4:42516350-42516369 MsG0480020501.01.T01:intron 55.0%
GCCATACCATTCCACCTTGG+CGG - Chr4:42516351-42516370 None:intergenic 55.0%
TAGGTGTCAGAGATGGGGTG+TGG + Chr4:42510480-42510499 MsG0480020502.01.T01:intron 55.0%
TCCGCCATACCATTCCACCT+TGG - Chr4:42516354-42516373 None:intergenic 55.0%
TCCGGCGACAGTTGAGTTTC+CGG - Chr4:42511980-42511999 None:intergenic 55.0%
TGCTTAGTTCCGGATGCAGC+TGG - Chr4:42520026-42520045 None:intergenic 55.0%
TGGGAAGGGATCCCATCGAT+TGG - Chr4:42518690-42518709 None:intergenic 55.0%
! AGTTTAAGATTCCGGCGCGG+TGG + Chr4:42511946-42511965 MsG0480020502.01.T01:intron 55.0%
! CAGGCGCTGTGATTGGTTGT+AGG + Chr4:42514551-42514570 MsG0480020502.01.T01:intron 55.0%
! GAGATGGATTCGGCATGTGC+AGG + Chr4:42512237-42512256 MsG0480020502.01.T01:intron 55.0%
! GATGGATTCGGCATGTGCAG+GGG + Chr4:42512239-42512258 MsG0480020502.01.T01:intron 55.0%
! TGCAGGAGCTTTAGTGCACC+GGG + Chr4:42518721-42518740 MsG0480020501.01.T01:intron 55.0%
!! AAGTATCGGCAACCGTGTGG+AGG - Chr4:42515251-42515270 None:intergenic 55.0%
!! AGTATCGGCAACCGTGTGGA+GGG - Chr4:42515250-42515269 None:intergenic 55.0%
!! CAAATTTGTTGGGCCGGTGC+TGG + Chr4:42516891-42516910 MsG0480020501.01.T01:intron 55.0%
!! CTGAAGTATCGGCAACCGTG+TGG - Chr4:42515254-42515273 None:intergenic 55.0%
AGCATGCACACGAAGGGAGG+AGG - Chr4:42512113-42512132 None:intergenic 60.0%
AGGGAGTGAGTAGGGTGAGG+GGG + Chr4:42516042-42516061 MsG0480020502.01.T01:intron 60.0%
AGTGGACAGTGCTCCAGCAC+CGG - Chr4:42516907-42516926 None:intergenic 60.0%
ATGGCACCGCCAAGGTGGAA+TGG + Chr4:42516342-42516361 MsG0480020501.01.T01:intron 60.0%
CCAAGGGAGTGAGTAGGGTG+AGG + Chr4:42516039-42516058 MsG0480020502.01.T01:intron 60.0%
CCTCACCCTACTCACTCCCT+TGG - Chr4:42516042-42516061 None:intergenic 60.0%
CTCCTGCATACGCAGGGTCT+GGG - Chr4:42518709-42518728 None:intergenic 60.0%
CTGGGGCTACCAAGCCAGAA+AGG - Chr4:42514703-42514722 None:intergenic 60.0%
GATTCGGCATGTGCAGGGGT+AGG + Chr4:42512243-42512262 MsG0480020502.01.T01:intron 60.0%
GCATACGCAGGGTCTGGGAA+GGG - Chr4:42518704-42518723 None:intergenic 60.0%
GGTGGCTAGGATTCGAACCC+CGG + Chr4:42512886-42512905 MsG0480020502.01.T01:intron 60.0%
GTGAGTAGGGTGAGGGGGTA+AGG + Chr4:42516047-42516066 MsG0480020502.01.T01:intron 60.0%
TATCGGCAACCGTGTGGAGG+GGG - Chr4:42515248-42515267 None:intergenic 60.0%
TCCTGCCATGGTGGCACCAT+AGG + Chr4:42516412-42516431 MsG0480020501.01.T01:intron 60.0%
TGCATACGCAGGGTCTGGGA+AGG - Chr4:42518705-42518724 None:intergenic 60.0%
TTCCCAGACCCTGCGTATGC+AGG + Chr4:42518704-42518723 MsG0480020501.01.T01:intron 60.0%
! ATTCCACCTTGGCGGTGCCA+TGG - Chr4:42516343-42516362 None:intergenic 60.0%
! GTATCGGCAACCGTGTGGAG+GGG - Chr4:42515249-42515268 None:intergenic 60.0%
! GTCACGACCTTGGTAGCCGT+TGG + Chr4:42519579-42519598 MsG0480020501.01.T01:intron 60.0%
!! TGCTGCCTATGGTGCCACCA+TGG - Chr4:42516420-42516439 None:intergenic 60.0%
!! TGGGGGGAGCATTGACGCAA+CGG + Chr4:42518571-42518590 MsG0480020501.01.T01:intron 60.0%
AGGGCACACTGAACCGTGCC+AGG - Chr4:42513984-42514003 None:intergenic 65.0%
ATCGGCAACCGTGTGGAGGG+GGG - Chr4:42515247-42515266 None:intergenic 65.0%
ATGCCATGGCACCGCCAAGG+TGG + Chr4:42516337-42516356 MsG0480020501.01.T01:intron 65.0%
GCTCCTGCATACGCAGGGTC+TGG - Chr4:42518710-42518729 None:intergenic 65.0%
GCTGCCGGGATCACAAGCCT+TGG - Chr4:42519398-42519417 None:intergenic 65.0%
GTCAGTTGCCCCCCTCCACA+CGG + Chr4:42515236-42515255 MsG0480020502.01.T01:intron 65.0%
TGGATGCCATGGCACCGCCA+AGG + Chr4:42516334-42516353 MsG0480020501.01.T01:intron 65.0%
!! GCCTATGGTGCCACCATGGC+AGG - Chr4:42516416-42516435 None:intergenic 65.0%
CGGCATGTGCAGGGGTAGGG+TGG + Chr4:42512247-42512266 MsG0480020502.01.T01:intron 70.0%
CGGCGCGGTGGTTCCGTCAC+CGG + Chr4:42511958-42511977 MsG0480020502.01.T01:intron 75.0%
!! CGGTGACGGAACCACCGCGC+CGG - Chr4:42511960-42511979 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 42510348 42520140 42510348 ID=MsG0480020502.01;
Chr4 mRNA 42510348 42520140 42510348 ID=MsG0480020502.01.T01;Parent=MsG0480020502.01
Chr4 exon 42510348 42510482 42510348 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42510431 42510482 42510431 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 CDS 42511212 42511318 42511212 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42511212 42511318 42511212 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42511917 42511933 42511917 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42511917 42511933 42511917 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42512146 42512157 42512146 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42512146 42512157 42512146 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42512259 42512282 42512259 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42512259 42512282 42512259 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42514336 42514354 42514336 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42514336 42514354 42514336 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42514444 42514495 42514444 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42514444 42514495 42514444 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42514582 42514601 42514582 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42514582 42514601 42514582 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42515060 42515088 42515060 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42515060 42515088 42515060 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42516489 42516503 42516489 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42516489 42516503 42516489 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42516703 42516730 42516703 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42516703 42516730 42516703 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42517387 42517399 42517387 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42517387 42517399 42517387 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42517550 42517561 42517550 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42517550 42517561 42517550 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42517763 42517800 42517763 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42517763 42517800 42517763 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42517955 42518035 42517955 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42517955 42518035 42517955 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42518331 42518365 42518331 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42518331 42518365 42518331 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42519119 42519208 42519119 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42519119 42519208 42519119 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42519319 42519478 42519319 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42519319 42519478 42519319 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Chr4 CDS 42519838 42519942 42519838 ID=MsG0480020502.01.T01.cds;Parent=MsG0480020502.01.T01
Chr4 exon 42519838 42520140 42519838 ID=MsG0480020502.01.T01.exon;Parent=MsG0480020502.01.T01
Gene Sequence

>MsG0480020502.01.T01

ATGAGTGGGGGTGGAACAAATTCTCGGTTGGAACCTGTAGGATCCAGTGTAGAATCTTCAATCTCATCATCACTGTACCGGAATGCCAAAACCATTTTGCTGTGGAAATGGTTTCTGCGAGTTGGACTCCAAAACCATTTTGCTGTGGAAATGGTTTATAAGAGGTTTCTAAAGATCAGATCTGAAACGGGTAGGGTGGTGCCCAAACTTTTTTTTAGGGTTTTGAGTCGTGACTGTTTATTGAGTTGTAAACTCGTGTCCTACACCAAAGCTTTGAAGCAAGATGGGATCTCAGATCTAGGAGTTCTTCGATTAAAGCTGGTCCAAGCTAGCGTCTCTTTGACCGAAATAGCTTATGTTAAAAAAGGGCCTCTGTTGCGAATTCTGTATGACTGCAAAGACAATCCAAAGAAACTGAACGCGGTCAAATACCAATCTCTCAAGAAAGAATTACTACTTCTCTCTGTGGGTATTGGATTGGGTTGTAGCGGATATTGCTTGATAGTTTTTTCCGTACAGGCTACTATAAGTTATGCGATTGGGGTCCTTTTCAGTTGTTTGTACCTTCAGCTCTTGTATCAACATGCAGACAACATATCCAGTGAAACTGTTCCTCAAATATTCATGAAAAAGAAGTCAAAGAAAATTGGTATAAGAAGTGAAGACCTTAGTGATTCTTTCGAGAAAACAATCAGGGGTAGTGGTATAGCACTTTCATCTCCAAGGCTTGTGATCCCGGCAGCAATTTATGGACTTTGGGCTGTGTCTCATCAGTATTTTATCAACGACTTGTTGGATTTTCAGCTTGTGCCAGCCATGTTTGGGATGTTTGTCTACAAAGCTGCTGCTCTTGTGCAAGTTTATAGAGACAATAAAGACTTAGGCTTTGAATTTCCAGAAGAATTTTGA

Protein sequence

>MsG0480020502.01.T01

MSGGGTNSRLEPVGSSVESSISSSLYRNAKTILLWKWFLRVGLQNHFAVEMVYKRFLKIRSETGRVVPKLFFRVLSRDCLLSCKLVSYTKALKQDGISDLGVLRLKLVQASVSLTEIAYVKKGPLLRILYDCKDNPKKLNAVKYQSLKKELLLLSVGIGLGCSGYCLIVFSVQATISYAIGVLFSCLYLQLLYQHADNISSETVPQIFMKKKSKKIGIRSEDLSDSFEKTIRGSGIALSSPRLVIPAAIYGLWAVSHQYFINDLLDFQLVPAMFGMFVYKAAALVQVYRDNKDLGFEFPEEF*