Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031342.01.T01 | XP_013451580.2 | 96.66 | 479 | 16 | 0 | 1 | 479 | 1 | 479 | 0 | 969 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031342.01.T01 | Q5XEP9 | 56.108 | 483 | 197 | 6 | 2 | 471 | 36 | 516 | 0 | 560 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031342.01.T01 | A0A1S2XJT1 | 82.942 | 469 | 79 | 1 | 1 | 468 | 1 | 469 | 0.0 | 808 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048357.01 | MsG0680031342.01 | 0.877760 | 4.854060e-69 | 2.470132e-65 |
| MsG0180000632.01 | MsG0680031342.01 | 0.811612 | 6.416873e-51 | 3.990204e-48 |
| MsG0180001200.01 | MsG0680031342.01 | 0.811433 | 7.017452e-51 | 4.343409e-48 |
| MsG0180001771.01 | MsG0680031342.01 | 0.807485 | 4.938813e-50 | 2.754264e-47 |
| MsG0180003741.01 | MsG0680031342.01 | 0.814493 | 1.497798e-51 | 1.006567e-48 |
| MsG0380011496.01 | MsG0680031342.01 | 0.856574 | 2.934930e-62 | 7.037136e-59 |
| MsG0380011501.01 | MsG0680031342.01 | 0.862303 | 5.576998e-64 | 1.625437e-60 |
| MsG0680031342.01 | MsG0680031707.01 | 0.876189 | 1.701044e-68 | 8.170360e-65 |
| MsG0680031342.01 | MsG0680034853.01 | 0.807386 | 5.183364e-50 | 2.883236e-47 |
| MsG0680031342.01 | MsG0780040846.01 | 0.868251 | 7.499714e-66 | 2.694845e-62 |
| MsG0680031342.01 | MsG0780040966.01 | 0.828158 | 1.050494e-54 | 1.035700e-51 |
| MsG0680031342.01 | MsG0780041259.01 | 0.808057 | 3.733655e-50 | 2.113431e-47 |
| MsG0680031342.01 | MsG0780041698.01 | 0.818056 | 2.392425e-52 | 1.771976e-49 |
| MsG0680031342.01 | MsG0880041858.01 | 0.807376 | 5.209225e-50 | 2.896834e-47 |
| MsG0680031342.01 | MsG0880045585.01 | 0.816403 | 5.631255e-52 | 3.986340e-49 |
| MsG0680031342.01 | MsG0880045586.01 | 0.815225 | 1.030982e-51 | 7.066276e-49 |
| MsG0480018909.01 | MsG0680031342.01 | 0.848759 | 4.995474e-60 | 9.263793e-57 |
| MsG0480019279.01 | MsG0680031342.01 | 0.808425 | 3.116151e-50 | 1.781206e-47 |
| MsG0480019922.01 | MsG0680031342.01 | 0.808150 | 3.567301e-50 | 2.024386e-47 |
| MsG0480024022.01 | MsG0680031342.01 | 0.816672 | 4.900744e-52 | 3.494893e-49 |
| MsG0380016465.01 | MsG0680031342.01 | 0.827076 | 1.910662e-54 | 1.825173e-51 |
| MsG0380017869.01 | MsG0680031342.01 | 0.823913 | 1.072301e-53 | 9.357889e-51 |
| MsG0580027925.01 | MsG0680031342.01 | 0.826203 | 3.085612e-54 | 2.874508e-51 |
| MsG0580029310.01 | MsG0680031342.01 | 0.829674 | 4.510139e-55 | 4.648265e-52 |
| MsG0580029417.01 | MsG0680031342.01 | 0.822217 | 2.666486e-53 | 2.217733e-50 |
| MsG0580029418.01 | MsG0680031342.01 | 0.837169 | 6.090074e-57 | 7.845671e-54 |
| MsG0280007305.01 | MsG0680031342.01 | 0.835079 | 2.066976e-56 | 2.500337e-53 |
| MsG0280007414.01 | MsG0680031342.01 | 0.827283 | 1.704033e-54 | 1.637753e-51 |
| MsG0280007506.01 | MsG0680031342.01 | 0.800737 | 1.252495e-48 | 5.876354e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031342.01.T01 | MTR_6g032965 | 96.947 | 393 | 12 | 0 | 87 | 479 | 1 | 393 | 0.0 | 795 |
| MsG0680031342.01.T01 | MTR_1g076430 | 58.650 | 474 | 192 | 2 | 2 | 471 | 34 | 507 | 0.0 | 578 |
| MsG0680031342.01.T01 | MTR_1g041085 | 58.491 | 477 | 188 | 4 | 2 | 471 | 40 | 513 | 0.0 | 571 |
| MsG0680031342.01.T01 | MTR_2g054940 | 57.143 | 476 | 196 | 4 | 2 | 471 | 33 | 506 | 0.0 | 561 |
| MsG0680031342.01.T01 | MTR_4g054630 | 54.352 | 471 | 202 | 5 | 12 | 472 | 1 | 468 | 0.0 | 516 |
| MsG0680031342.01.T01 | MTR_4g054415 | 57.512 | 426 | 179 | 2 | 49 | 472 | 2 | 427 | 0.0 | 514 |
| MsG0680031342.01.T01 | MTR_4g113280 | 53.571 | 476 | 202 | 5 | 2 | 471 | 22 | 484 | 1.36e-180 | 514 |
| MsG0680031342.01.T01 | MTR_7g081695 | 54.873 | 472 | 193 | 5 | 2 | 467 | 33 | 490 | 2.86e-179 | 521 |
| MsG0680031342.01.T01 | MTR_6g074880 | 56.206 | 427 | 185 | 2 | 43 | 468 | 41 | 466 | 2.43e-175 | 501 |
| MsG0680031342.01.T01 | MTR_7g118170 | 56.595 | 417 | 178 | 2 | 60 | 473 | 115 | 531 | 2.75e-171 | 493 |
| MsG0680031342.01.T01 | MTR_4g070270 | 51.266 | 474 | 224 | 4 | 2 | 470 | 31 | 502 | 2.87e-170 | 489 |
| MsG0680031342.01.T01 | MTR_3g105550 | 46.392 | 485 | 244 | 3 | 2 | 470 | 52 | 536 | 1.85e-161 | 468 |
| MsG0680031342.01.T01 | MTR_1g110930 | 50.816 | 429 | 209 | 2 | 43 | 471 | 65 | 491 | 8.28e-159 | 459 |
| MsG0680031342.01.T01 | MTR_5g056510 | 46.809 | 470 | 245 | 4 | 6 | 471 | 23 | 491 | 2.97e-154 | 448 |
| MsG0680031342.01.T01 | MTR_2g007020 | 48.786 | 412 | 206 | 4 | 63 | 472 | 45 | 453 | 5.14e-140 | 410 |
| MsG0680031342.01.T01 | MTR_7g118160 | 48.537 | 410 | 167 | 4 | 67 | 474 | 56 | 423 | 4.38e-135 | 397 |
| MsG0680031342.01.T01 | MTR_2g436480 | 47.317 | 410 | 212 | 3 | 63 | 470 | 44 | 451 | 6.56e-130 | 384 |
| MsG0680031342.01.T01 | MTR_2g013740 | 46.517 | 402 | 209 | 3 | 62 | 462 | 107 | 503 | 3.64e-127 | 379 |
| MsG0680031342.01.T01 | MTR_1g102290 | 40.441 | 408 | 242 | 1 | 62 | 468 | 77 | 484 | 1.49e-104 | 320 |
| MsG0680031342.01.T01 | MTR_4g062190 | 38.761 | 436 | 238 | 7 | 63 | 478 | 27 | 453 | 6.74e-98 | 303 |
| MsG0680031342.01.T01 | MTR_4g062270 | 38.208 | 424 | 248 | 6 | 63 | 478 | 27 | 444 | 2.07e-95 | 296 |
| MsG0680031342.01.T01 | MTR_3g072940 | 40.194 | 413 | 239 | 4 | 60 | 468 | 75 | 483 | 7.08e-95 | 295 |
| MsG0680031342.01.T01 | MTR_3g072980 | 40.194 | 413 | 239 | 4 | 60 | 468 | 75 | 483 | 7.31e-95 | 295 |
| MsG0680031342.01.T01 | MTR_1g115560 | 35.683 | 454 | 255 | 8 | 45 | 467 | 4 | 451 | 3.59e-93 | 291 |
| MsG0680031342.01.T01 | MTR_4g054260 | 56.299 | 254 | 93 | 2 | 216 | 468 | 87 | 323 | 4.53e-93 | 285 |
| MsG0680031342.01.T01 | MTR_4g062170 | 37.788 | 434 | 244 | 7 | 63 | 478 | 27 | 452 | 1.42e-92 | 289 |
| MsG0680031342.01.T01 | MTR_2g096210 | 38.515 | 431 | 226 | 10 | 63 | 467 | 27 | 444 | 2.17e-92 | 289 |
| MsG0680031342.01.T01 | MTR_6g051440 | 41.626 | 406 | 229 | 4 | 67 | 468 | 81 | 482 | 4.11e-92 | 288 |
| MsG0680031342.01.T01 | MTR_4g053905 | 60.870 | 161 | 63 | 0 | 312 | 472 | 1 | 161 | 1.67e-67 | 214 |
| MsG0680031342.01.T01 | MTR_4g054265 | 45.690 | 116 | 62 | 1 | 49 | 163 | 2 | 117 | 1.02e-27 | 107 |
| MsG0680031342.01.T01 | MTR_4g078730 | 23.462 | 260 | 162 | 8 | 183 | 437 | 152 | 379 | 8.76e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031342.01.T01 | AT1G04220 | 56.108 | 483 | 197 | 6 | 2 | 471 | 36 | 516 | 0.0 | 560 |
| MsG0680031342.01.T01 | AT2G26640 | 56.303 | 476 | 200 | 4 | 2 | 471 | 31 | 504 | 0.0 | 550 |
| MsG0680031342.01.T01 | AT5G43760 | 60.369 | 434 | 162 | 4 | 48 | 471 | 88 | 521 | 0.0 | 541 |
| MsG0680031342.01.T01 | AT2G16280 | 51.471 | 476 | 220 | 4 | 2 | 470 | 39 | 510 | 2.10e-174 | 500 |
| MsG0680031342.01.T01 | AT1G19440 | 51.261 | 476 | 221 | 4 | 2 | 470 | 43 | 514 | 5.00e-174 | 499 |
| MsG0680031342.01.T01 | AT4G34510 | 50.844 | 474 | 226 | 5 | 2 | 472 | 18 | 487 | 3.20e-172 | 493 |
| MsG0680031342.01.T01 | AT1G01120 | 53.162 | 427 | 190 | 2 | 52 | 468 | 98 | 524 | 1.31e-171 | 493 |
| MsG0680031342.01.T01 | AT2G46720 | 50.227 | 440 | 213 | 3 | 32 | 468 | 27 | 463 | 8.63e-165 | 474 |
| MsG0680031342.01.T01 | AT1G25450 | 48.529 | 476 | 236 | 4 | 2 | 471 | 15 | 487 | 2.23e-158 | 458 |
| MsG0680031342.01.T01 | AT3G10280 | 49.091 | 440 | 211 | 4 | 32 | 468 | 27 | 456 | 2.50e-157 | 454 |
| MsG0680031342.01.T01 | AT4G34250 | 48.649 | 481 | 230 | 6 | 6 | 473 | 14 | 490 | 8.09e-157 | 454 |
| MsG0680031342.01.T01 | AT1G68530 | 46.751 | 477 | 243 | 5 | 2 | 471 | 20 | 492 | 1.12e-156 | 454 |
| MsG0680031342.01.T01 | AT4G34520 | 52.459 | 427 | 190 | 4 | 55 | 470 | 66 | 490 | 2.71e-155 | 451 |
| MsG0680031342.01.T01 | AT2G15090 | 52.000 | 425 | 194 | 5 | 55 | 470 | 56 | 479 | 1.68e-154 | 448 |
| MsG0680031342.01.T01 | AT2G26250 | 43.976 | 498 | 250 | 2 | 2 | 470 | 53 | 550 | 2.26e-153 | 447 |
| MsG0680031342.01.T01 | AT1G71160 | 45.991 | 424 | 227 | 2 | 45 | 468 | 25 | 446 | 6.93e-135 | 397 |
| MsG0680031342.01.T01 | AT5G49070 | 45.154 | 423 | 228 | 3 | 51 | 471 | 36 | 456 | 1.14e-124 | 371 |
| MsG0680031342.01.T01 | AT3G52160 | 43.373 | 415 | 203 | 3 | 46 | 459 | 66 | 449 | 1.54e-117 | 353 |
| MsG0680031342.01.T01 | AT3G52160 | 45.604 | 364 | 167 | 2 | 96 | 459 | 4 | 336 | 8.33e-110 | 329 |
| MsG0680031342.01.T01 | AT2G28630 | 38.462 | 429 | 243 | 7 | 68 | 478 | 32 | 457 | 2.58e-100 | 309 |
| MsG0680031342.01.T01 | AT2G28630 | 38.462 | 429 | 243 | 7 | 68 | 478 | 32 | 457 | 2.58e-100 | 309 |
| MsG0680031342.01.T01 | AT1G07720 | 38.679 | 424 | 238 | 7 | 63 | 467 | 27 | 447 | 2.69e-97 | 301 |
| MsG0680031342.01.T01 | AT5G04530 | 40.326 | 429 | 231 | 10 | 56 | 467 | 17 | 437 | 2.97e-97 | 301 |
| MsG0680031342.01.T01 | AT1G07720 | 38.679 | 424 | 238 | 7 | 63 | 467 | 70 | 490 | 3.27e-97 | 303 |
| MsG0680031342.01.T01 | AT1G68530 | 48.387 | 279 | 142 | 1 | 49 | 327 | 73 | 349 | 5.63e-89 | 277 |
| MsG0680031342.01.T01 | AT5G49070 | 41.219 | 279 | 163 | 1 | 51 | 329 | 36 | 313 | 1.53e-65 | 214 |
| MsG0680031342.01.T01 | AT4G34850 | 25.306 | 245 | 145 | 9 | 201 | 436 | 91 | 306 | 4.43e-12 | 67.4 |
| MsG0680031342.01.T01 | AT4G34850 | 25.306 | 245 | 145 | 9 | 201 | 436 | 164 | 379 | 7.30e-12 | 67.4 |
Find 73 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATATGGCAAATGGCTTT+TGG | 0.246325 | 6:+18614928 | MsG0680031342.01.T01:CDS |
| GTTAATCATTATAAACTTAG+AGG | 0.259701 | 6:+18612273 | MsG0680031342.01.T01:CDS |
| TTGGATAGAGCAAAACATTT+TGG | 0.264127 | 6:+18611988 | MsG0680031342.01.T01:CDS |
| AGCACTAAAGCATATGAGTT+TGG | 0.291741 | 6:-18614310 | None:intergenic |
| TCCATTAGTCCTCCCAATTT+CGG | 0.294314 | 6:+18614630 | MsG0680031342.01.T01:CDS |
| GGAATTTCTAATAATGCTTC+AGG | 0.313917 | 6:-18612087 | None:intergenic |
| TCCGAAATTGGGAGGACTAA+TGG | 0.324601 | 6:-18614631 | None:intergenic |
| GTTCAATTCAACTACATAAC+TGG | 0.326614 | 6:-18615243 | None:intergenic |
| AGCTAAGGGGAGAGTTAAAA+AGG | 0.330815 | 6:+18614900 | MsG0680031342.01.T01:CDS |
| AGATTATTGATTATAATATT+CGG | 0.334053 | 6:+18615220 | MsG0680031342.01.T01:three_prime_UTR |
| AAAGTTGAAGCTAAAGATAT+TGG | 0.336152 | 6:+18612192 | MsG0680031342.01.T01:CDS |
| TGTGTCTAGAAAGAATAATT+AGG | 0.340619 | 6:+18615121 | MsG0680031342.01.T01:three_prime_UTR |
| TTGTTCATTGGCAATGGAAC+AGG | 0.342492 | 6:-18615048 | None:intergenic |
| TAACTTTCATGTCATGTTTG+TGG | 0.344699 | 6:+18615094 | MsG0680031342.01.T01:three_prime_UTR |
| TAGAAATGCTTCAACATTGT+TGG | 0.353388 | 6:-18611718 | None:intergenic |
| AACTTAAAATTCGGCATGTA+TGG | 0.357301 | 6:-18614712 | None:intergenic |
| TTAATCATATGTTTGTTCAT+TGG | 0.363214 | 6:-18615060 | None:intergenic |
| TTGCACAAAAGAAATGTTGT+TGG | 0.390520 | 6:+18611969 | MsG0680031342.01.T01:CDS |
| GATCTATAATCTTAGTGGTA+TGG | 0.390916 | 6:+18612305 | MsG0680031342.01.T01:CDS |
| GCACTAAAGCATATGAGTTT+GGG | 0.397910 | 6:-18614309 | None:intergenic |
| TACTAATTGTCTCTTTCGAA+TGG | 0.399551 | 6:+18614390 | MsG0680031342.01.T01:CDS |
| AATATCTTTAGCTTCAACTT+TGG | 0.416100 | 6:-18612190 | None:intergenic |
| TCGAACGCTAACTTAAAATT+CGG | 0.417831 | 6:-18614721 | None:intergenic |
| TTAAGGTTAATACTGCTGTT+TGG | 0.420779 | 6:+18614959 | MsG0680031342.01.T01:CDS |
| CTATATAGTGTCATTCTTGA+AGG | 0.424575 | 6:-18614826 | None:intergenic |
| ATCTATAATCTTAGTGGTAT+GGG | 0.428495 | 6:+18612306 | MsG0680031342.01.T01:CDS |
| GTGAATATTCTAATATATGT+TGG | 0.437291 | 6:-18615298 | None:intergenic |
| TTTATCAATATTGATGGTTG+AGG | 0.454477 | 6:-18611841 | None:intergenic |
| TGTTGTTGAAAAGGATAGCT+AGG | 0.454589 | 6:-18611677 | None:intergenic |
| GTGTGTGAATGTTGTTGAAA+AGG | 0.454604 | 6:-18611686 | None:intergenic |
| GGGACATAAAATATGGCAAA+TGG | 0.457927 | 6:+18614921 | MsG0680031342.01.T01:CDS |
| ACTAATTGTCTCTTTCGAAT+GGG | 0.459375 | 6:+18614391 | MsG0680031342.01.T01:CDS |
| TCATCAAGTGTTAGTCTTGG+TGG | 0.459635 | 6:-18612108 | None:intergenic |
| AAATACCTCAAGAAGACGTT+TGG | 0.460466 | 6:-18612361 | None:intergenic |
| ACACATCATCAAGTTCTGTT+TGG | 0.465892 | 6:+18614857 | MsG0680031342.01.T01:CDS |
| CGATGGATGACTTGAGAGTA+GGG | 0.466110 | 6:-18614425 | None:intergenic |
| AGAATGACACTATATAGATA+TGG | 0.470646 | 6:+18614832 | MsG0680031342.01.T01:CDS |
| AGTGGTATGGGATGCAGTGC+TGG | 0.470681 | 6:+18612318 | MsG0680031342.01.T01:CDS |
| ATATGTTTGTTCATTGGCAA+TGG | 0.471516 | 6:-18615054 | None:intergenic |
| GCTTCATCAAGTGTTAGTCT+TGG | 0.477201 | 6:-18612111 | None:intergenic |
| TTCGAAAGAGACAATTAGTA+AGG | 0.478311 | 6:-18614387 | None:intergenic |
| ATTGTCTTATTGTGAAGCTA+AGG | 0.483820 | 6:+18614885 | MsG0680031342.01.T01:CDS |
| CATGAAAATGTAGTAAACTA+AGG | 0.486928 | 6:-18611884 | None:intergenic |
| TGTGACATGCAAAATCTACT+AGG | 0.521489 | 6:-18611927 | None:intergenic |
| TTTGAGCGGCTACGGTCCGA+TGG | 0.522197 | 6:-18614442 | None:intergenic |
| TTGTCTTATTGTGAAGCTAA+GGG | 0.526933 | 6:+18614886 | MsG0680031342.01.T01:CDS |
| CCGATGGATGACTTGAGAGT+AGG | 0.528757 | 6:-18614426 | None:intergenic |
| CAATTAGTAAGGATCATTGA+AGG | 0.529851 | 6:-18614376 | None:intergenic |
| TTAATCATTATAAACTTAGA+GGG | 0.529909 | 6:+18612274 | MsG0680031342.01.T01:CDS |
| AGGATCTCATGAATGTTGCT+AGG | 0.531519 | 6:+18614575 | MsG0680031342.01.T01:CDS |
| GCGGTAGAGCGGTTCTTGAT+CGG | 0.540567 | 6:+18614764 | MsG0680031342.01.T01:CDS |
| AATTGTCTCTTTCGAATGGG+TGG | 0.541404 | 6:+18614394 | MsG0680031342.01.T01:CDS |
| TGCTTCAGGAACATAAGTGA+TGG | 0.543655 | 6:-18612073 | None:intergenic |
| TAAAGATATTGGAATTCTTG+TGG | 0.557701 | 6:+18612203 | MsG0680031342.01.T01:CDS |
| GACTAACACTTGATGAAGCA+AGG | 0.570909 | 6:+18612115 | MsG0680031342.01.T01:CDS |
| GGATCTCATGAATGTTGCTA+GGG | 0.577726 | 6:+18614576 | MsG0680031342.01.T01:CDS |
| TCTCTTTCGAATGGGTGGAT+CGG | 0.581140 | 6:+18614399 | MsG0680031342.01.T01:CDS |
| GTAGTAGCTACATCATGTGT+AGG | 0.584328 | 6:+18611787 | MsG0680031342.01.T01:CDS |
| AATTAGTAAGGATCATTGAA+GGG | 0.585870 | 6:-18614375 | None:intergenic |
| CAGTGCTGGTGTTATTGCAG+TGG | 0.587920 | 6:+18612332 | MsG0680031342.01.T01:CDS |
| TGTTCATTGGCAATGGAACA+GGG | 0.590457 | 6:-18615047 | None:intergenic |
| CTTTGCCAAACGTCTTCTTG+AGG | 0.595847 | 6:+18612356 | MsG0680031342.01.T01:CDS |
| CATGCATACGGGCGGTAGAG+CGG | 0.599254 | 6:+18614753 | MsG0680031342.01.T01:CDS |
| GCTTCAGGAACATAAGTGAT+GGG | 0.600651 | 6:-18612072 | None:intergenic |
| ACAATAGTATCTGAAAGTGA+TGG | 0.605880 | 6:-18612252 | None:intergenic |
| GTTGTTGAAAAGGATAGCTA+GGG | 0.606417 | 6:-18611676 | None:intergenic |
| GTATCTGAAAGTGATGGTGT+AGG | 0.606742 | 6:-18612246 | None:intergenic |
| ACTCGGTGTTAAACTATCGA+AGG | 0.617292 | 6:+18614555 | MsG0680031342.01.T01:CDS |
| TGTCTTATTGTGAAGCTAAG+GGG | 0.629341 | 6:+18614887 | MsG0680031342.01.T01:CDS |
| CGTACACACATAACATCGCT+CGG | 0.629342 | 6:+18614607 | MsG0680031342.01.T01:CDS |
| CCTACTCTCAAGTCATCCAT+CGG | 0.642889 | 6:+18614426 | MsG0680031342.01.T01:CDS |
| CAAATCTCAAGCATATACAA+AGG | 0.644919 | 6:+18614346 | MsG0680031342.01.T01:CDS |
| CATTCGTTGCGCACTCACGT+AGG | 0.677333 | 6:+18614478 | MsG0680031342.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAATTATAAAAGAGT+GGG | + | Chr6:18612979-18612998 | MsG0680031342.01.T01:intron | 10.0% |
| !! | TTAAAAAAATTATAAAAGAG+TGG | + | Chr6:18612978-18612997 | MsG0680031342.01.T01:intron | 10.0% |
| !!! | AGATTATTGATTATAATATT+CGG | + | Chr6:18615220-18615239 | MsG0680031342.01.T01:three_prime_UTR | 10.0% |
| !!! | ATGTATATGTTATTTTTTTT+CGG | - | Chr6:18613532-18613551 | None:intergenic | 10.0% |
| !!! | ATTATTTTTGTTTTTTTTGT+TGG | - | Chr6:18613935-18613954 | None:intergenic | 10.0% |
| !!! | TATTTTTCTTTTTCTTTTTT+TGG | - | Chr6:18613355-18613374 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATGAAAATGTC+TGG | - | Chr6:18612598-18612617 | None:intergenic | 15.0% |
| !! | TTAATCATTATAAACTTAGA+GGG | + | Chr6:18612274-18612293 | MsG0680031342.01.T01:CDS | 15.0% |
| !! | TTATATGAGAAAACAATATA+TGG | - | Chr6:18613768-18613787 | None:intergenic | 15.0% |
| !!! | AAAGAGTACAAAATTATTTA+AGG | + | Chr6:18612448-18612467 | MsG0680031342.01.T01:intron | 15.0% |
| !!! | AATGATTTTATCAATATTGA+TGG | - | Chr6:18611850-18611869 | None:intergenic | 15.0% |
| !!! | ATATTGTTTTCTCATATAAT+TGG | + | Chr6:18613769-18613788 | MsG0680031342.01.T01:intron | 15.0% |
| !!! | GTTTGTTAAATTTATTTGTA+GGG | - | Chr6:18614203-18614222 | None:intergenic | 15.0% |
| !!! | TATTTTATCTAAAAGGTTAT+TGG | + | Chr6:18612800-18612819 | MsG0680031342.01.T01:intron | 15.0% |
| !!! | TGAAGATATTTTATAATTGA+TGG | + | Chr6:18614050-18614069 | MsG0680031342.01.T01:intron | 15.0% |
| !!! | TGTTTGTTAAATTTATTTGT+AGG | - | Chr6:18614204-18614223 | None:intergenic | 15.0% |
| !! | AAAATAAAATATGCAAGATC+CGG | + | Chr6:18613486-18613505 | MsG0680031342.01.T01:intron | 20.0% |
| !! | AACTATATGAAATTGATGAA+TGG | - | Chr6:18612862-18612881 | None:intergenic | 20.0% |
| !! | ACCTCTAGTATTAAAATATT+TGG | - | Chr6:18612649-18612668 | None:intergenic | 20.0% |
| !! | ATAATCAAGCTTAATTAGTT+AGG | - | Chr6:18614265-18614284 | None:intergenic | 20.0% |
| !! | CAGAATCTTTAATTCAATAA+TGG | - | Chr6:18613877-18613896 | None:intergenic | 20.0% |
| !! | CCTCTAGTATTAAAATATTT+GGG | - | Chr6:18612648-18612667 | None:intergenic | 20.0% |
| !! | GAGATATCAATATGTATTTA+TGG | + | Chr6:18612943-18612962 | MsG0680031342.01.T01:intron | 20.0% |
| !! | GTGAATATTCTAATATATGT+TGG | - | Chr6:18615301-18615320 | None:intergenic | 20.0% |
| !! | GTTAATCATTATAAACTTAG+AGG | + | Chr6:18612273-18612292 | MsG0680031342.01.T01:CDS | 20.0% |
| !! | GTTATTTACATATAGCAAAA+GGG | + | Chr6:18613084-18613103 | MsG0680031342.01.T01:intron | 20.0% |
| !! | TTAAAAAGGGACATAAAATA+TGG | + | Chr6:18614914-18614933 | MsG0680031342.01.T01:CDS | 20.0% |
| !! | TTAAAAATGTTCTCATATAG+TGG | - | Chr6:18613729-18613748 | None:intergenic | 20.0% |
| !! | TTAATCATATGTTTGTTCAT+TGG | - | Chr6:18615063-18615082 | None:intergenic | 20.0% |
| !!! | AAGAGTTTTGCTATTTATTA+TGG | + | Chr6:18613590-18613609 | MsG0680031342.01.T01:intron | 20.0% |
| !!! | ACAAATAAAAAAAGTGTAGT+TGG | + | Chr6:18613222-18613241 | MsG0680031342.01.T01:intron | 20.0% |
| !!! | ACTATTTTATACTTGTTTGT+TGG | + | Chr6:18612509-18612528 | MsG0680031342.01.T01:intron | 20.0% |
| !!! | ATTTTGATCTATAATCTTAG+TGG | + | Chr6:18612300-18612319 | MsG0680031342.01.T01:CDS | 20.0% |
| !!! | CTGCTATTAATTTTTTTTGA+AGG | - | Chr6:18612924-18612943 | None:intergenic | 20.0% |
| !!! | GAATCAAATTTAGTTCTTTT+TGG | + | Chr6:18612141-18612160 | MsG0680031342.01.T01:CDS | 20.0% |
| !!! | TGATTCATAAGATTTTAGAA+AGG | + | Chr6:18612037-18612056 | MsG0680031342.01.T01:CDS | 20.0% |
| ! | AAAGTTGAAGCTAAAGATAT+TGG | + | Chr6:18612192-18612211 | MsG0680031342.01.T01:CDS | 25.0% |
| ! | AAATAAAATATGCAAGATCC+GGG | + | Chr6:18613487-18613506 | MsG0680031342.01.T01:intron | 25.0% |
| ! | AATTAGTAAGGATCATTGAA+GGG | - | Chr6:18614378-18614397 | None:intergenic | 25.0% |
| ! | AGAATGACACTATATAGATA+TGG | + | Chr6:18614832-18614851 | MsG0680031342.01.T01:CDS | 25.0% |
| ! | ATCTATAATCTTAGTGGTAT+GGG | + | Chr6:18612306-18612325 | MsG0680031342.01.T01:CDS | 25.0% |
| ! | ATGTGAAAAATTTAGTTGAG+AGG | + | Chr6:18614665-18614684 | MsG0680031342.01.T01:CDS | 25.0% |
| ! | CATGAAAATGTAGTAAACTA+AGG | - | Chr6:18611887-18611906 | None:intergenic | 25.0% |
| ! | CTAAATCATTGAAAAATGCT+TGG | + | Chr6:18615004-18615023 | MsG0680031342.01.T01:CDS | 25.0% |
| ! | GGTTATTTACATATAGCAAA+AGG | + | Chr6:18613083-18613102 | MsG0680031342.01.T01:intron | 25.0% |
| ! | TAAAGATATTGGAATTCTTG+TGG | + | Chr6:18612203-18612222 | MsG0680031342.01.T01:CDS | 25.0% |
| ! | TATTTATGACATGCAATTAC+AGG | + | Chr6:18614282-18614301 | MsG0680031342.01.T01:intron | 25.0% |
| ! | TGTGTCTAGAAAGAATAATT+AGG | + | Chr6:18615121-18615140 | MsG0680031342.01.T01:three_prime_UTR | 25.0% |
| !! | AATATCTTTAGCTTCAACTT+TGG | - | Chr6:18612193-18612212 | None:intergenic | 25.0% |
| !! | CATTAGCTGTATTAATTTGA+AGG | + | Chr6:18613264-18613283 | MsG0680031342.01.T01:intron | 25.0% |
| !! | TCTACTAGGTATATTTTGTT+TGG | - | Chr6:18611916-18611935 | None:intergenic | 25.0% |
| !! | TTTATCAATATTGATGGTTG+AGG | - | Chr6:18611844-18611863 | None:intergenic | 25.0% |
| !!! | ATACTGGAAGATACTTTTTT+TGG | - | Chr6:18613796-18613815 | None:intergenic | 25.0% |
| !!! | ATGTTATTTTTTTTCGGTAG+TGG | - | Chr6:18613526-18613545 | None:intergenic | 25.0% |
| !!! | CAAGCATTTTTCAATGATTT+AGG | - | Chr6:18615006-18615025 | None:intergenic | 25.0% |
| !!! | CCCAAATATTTTAATACTAG+AGG | + | Chr6:18612645-18612664 | MsG0680031342.01.T01:intron | 25.0% |
| !!! | CGGTTTTAGTTGTTTTTTTT+TGG | + | Chr6:18613062-18613081 | MsG0680031342.01.T01:intron | 25.0% |
| !!! | GTGCAAATACAATTGTTTTT+TGG | - | Chr6:18611955-18611974 | None:intergenic | 25.0% |
| AAAATATTTGGGTCTCTCAA+TGG | - | Chr6:18612637-18612656 | None:intergenic | 30.0% | |
| AACTTAAAATTCGGCATGTA+TGG | - | Chr6:18614715-18614734 | None:intergenic | 30.0% | |
| AATAAAATATGCAAGATCCG+GGG | + | Chr6:18613488-18613507 | MsG0680031342.01.T01:intron | 30.0% | |
| ACAATAGTATCTGAAAGTGA+TGG | - | Chr6:18612255-18612274 | None:intergenic | 30.0% | |
| ACTAATTGTCTCTTTCGAAT+GGG | + | Chr6:18614391-18614410 | MsG0680031342.01.T01:CDS | 30.0% | |
| ATATGTTTGTTCATTGGCAA+TGG | - | Chr6:18615057-18615076 | None:intergenic | 30.0% | |
| ATCATTGAAAAATGCTTGGA+TGG | + | Chr6:18615008-18615027 | MsG0680031342.01.T01:CDS | 30.0% | |
| CAAATCTCAAGCATATACAA+AGG | + | Chr6:18614346-18614365 | MsG0680031342.01.T01:CDS | 30.0% | |
| CAATTAGTAAGGATCATTGA+AGG | - | Chr6:18614379-18614398 | None:intergenic | 30.0% | |
| GAAGACGAAAAAGAAATACT+CGG | + | Chr6:18614538-18614557 | MsG0680031342.01.T01:CDS | 30.0% | |
| GATCTATAATCTTAGTGGTA+TGG | + | Chr6:18612305-18612324 | MsG0680031342.01.T01:CDS | 30.0% | |
| GGAATTTCTAATAATGCTTC+AGG | - | Chr6:18612090-18612109 | None:intergenic | 30.0% | |
| GTGTGAATTTGTATCATTTG+CGG | - | Chr6:18613656-18613675 | None:intergenic | 30.0% | |
| GTTCAATTCAACTACATAAC+TGG | - | Chr6:18615246-18615265 | None:intergenic | 30.0% | |
| TAACTTTCATGTCATGTTTG+TGG | + | Chr6:18615094-18615113 | MsG0680031342.01.T01:three_prime_UTR | 30.0% | |
| TACTAATTGTCTCTTTCGAA+TGG | + | Chr6:18614390-18614409 | MsG0680031342.01.T01:CDS | 30.0% | |
| TAGAAATGCTTCAACATTGT+TGG | - | Chr6:18611721-18611740 | None:intergenic | 30.0% | |
| TCGAACGCTAACTTAAAATT+CGG | - | Chr6:18614724-18614743 | None:intergenic | 30.0% | |
| TTAAGGTTAATACTGCTGTT+TGG | + | Chr6:18614959-18614978 | MsG0680031342.01.T01:CDS | 30.0% | |
| TTCGAAAGAGACAATTAGTA+AGG | - | Chr6:18614390-18614409 | None:intergenic | 30.0% | |
| TTGCACAAAAGAAATGTTGT+TGG | + | Chr6:18611969-18611988 | MsG0680031342.01.T01:CDS | 30.0% | |
| ! | AAAATATGGCAAATGGCTTT+TGG | + | Chr6:18614928-18614947 | MsG0680031342.01.T01:CDS | 30.0% |
| ! | ACTTGAGTTTTTCCGAAATT+GGG | - | Chr6:18614645-18614664 | None:intergenic | 30.0% |
| ! | ATTGTCTTATTGTGAAGCTA+AGG | + | Chr6:18614885-18614904 | MsG0680031342.01.T01:CDS | 30.0% |
| ! | CTATATAGTGTCATTCTTGA+AGG | - | Chr6:18614829-18614848 | None:intergenic | 30.0% |
| ! | TACTTGAGTTTTTCCGAAAT+TGG | - | Chr6:18614646-18614665 | None:intergenic | 30.0% |
| ! | TGATATTGCTTCTTGTTTGT+CGG | + | Chr6:18612485-18612504 | MsG0680031342.01.T01:intron | 30.0% |
| ! | TTGGATAGAGCAAAACATTT+TGG | + | Chr6:18611988-18612007 | MsG0680031342.01.T01:CDS | 30.0% |
| ! | TTGTCTTATTGTGAAGCTAA+GGG | + | Chr6:18614886-18614905 | MsG0680031342.01.T01:CDS | 30.0% |
| !! | CATAAGATTTTAGAAAGGTC+AGG | + | Chr6:18612042-18612061 | MsG0680031342.01.T01:CDS | 30.0% |
| !! | TGAGCTTGATGATTTTCATA+TGG | + | Chr6:18614801-18614820 | MsG0680031342.01.T01:CDS | 30.0% |
| AAATACCTCAAGAAGACGTT+TGG | - | Chr6:18612364-18612383 | None:intergenic | 35.0% | |
| ACACATCATCAAGTTCTGTT+TGG | + | Chr6:18614857-18614876 | MsG0680031342.01.T01:CDS | 35.0% | |
| AGCACTAAAGCATATGAGTT+TGG | - | Chr6:18614313-18614332 | None:intergenic | 35.0% | |
| CAAATTACATGTAGCTAGCA+AGG | - | Chr6:18614240-18614259 | None:intergenic | 35.0% | |
| GCACTAAAGCATATGAGTTT+GGG | - | Chr6:18614312-18614331 | None:intergenic | 35.0% | |
| GGGACATAAAATATGGCAAA+TGG | + | Chr6:18614921-18614940 | MsG0680031342.01.T01:CDS | 35.0% | |
| GTGTGTGAATGTTGTTGAAA+AGG | - | Chr6:18611689-18611708 | None:intergenic | 35.0% | |
| GTTGTTGAAAAGGATAGCTA+GGG | - | Chr6:18611679-18611698 | None:intergenic | 35.0% | |
| GTTTCACTGTCAATCATCAT+AGG | + | Chr6:18613850-18613869 | MsG0680031342.01.T01:intron | 35.0% | |
| TAGTGGTGAAATAGATACAG+TGG | - | Chr6:18613712-18613731 | None:intergenic | 35.0% | |
| TGTGACATGCAAAATCTACT+AGG | - | Chr6:18611930-18611949 | None:intergenic | 35.0% | |
| TGTGCTAAGCTCACTTATTA+AGG | - | Chr6:18614177-18614196 | None:intergenic | 35.0% | |
| TGTTGTTGAAAAGGATAGCT+AGG | - | Chr6:18611680-18611699 | None:intergenic | 35.0% | |
| ! | CGATCAATTTTGCATGCATA+CGG | + | Chr6:18614741-18614760 | MsG0680031342.01.T01:CDS | 35.0% |
| ! | GATCAATTTTGCATGCATAC+GGG | + | Chr6:18614742-18614761 | MsG0680031342.01.T01:CDS | 35.0% |
| ! | TGTCTTATTGTGAAGCTAAG+GGG | + | Chr6:18614887-18614906 | MsG0680031342.01.T01:CDS | 35.0% |
| !! | ATTTTAGAAAGGTCAGGTGT+GGG | + | Chr6:18612048-18612067 | MsG0680031342.01.T01:CDS | 35.0% |
| !! | GCATCAACTGATATTTTGAG+CGG | - | Chr6:18614459-18614478 | None:intergenic | 35.0% |
| !!! | TATTTTTTTTCGGTAGTGGC+CGG | - | Chr6:18613522-18613541 | None:intergenic | 35.0% |
| AATTGTCTCTTTCGAATGGG+TGG | + | Chr6:18614394-18614413 | MsG0680031342.01.T01:CDS | 40.0% | |
| ACCTTAGTCCTACTCAGATA+CGG | - | Chr6:18613038-18613057 | None:intergenic | 40.0% | |
| AGCTAAGGGGAGAGTTAAAA+AGG | + | Chr6:18614900-18614919 | MsG0680031342.01.T01:CDS | 40.0% | |
| AGGATCTCATGAATGTTGCT+AGG | + | Chr6:18614575-18614594 | MsG0680031342.01.T01:CDS | 40.0% | |
| CTGTGACTGAACACATATAC+TGG | - | Chr6:18613812-18613831 | None:intergenic | 40.0% | |
| GACTAACACTTGATGAAGCA+AGG | + | Chr6:18612115-18612134 | MsG0680031342.01.T01:CDS | 40.0% | |
| GCTAAGGGGAGAGTTAAAAA+GGG | + | Chr6:18614901-18614920 | MsG0680031342.01.T01:CDS | 40.0% | |
| GCTTCAGGAACATAAGTGAT+GGG | - | Chr6:18612075-18612094 | None:intergenic | 40.0% | |
| GGATCTCATGAATGTTGCTA+GGG | + | Chr6:18614576-18614595 | MsG0680031342.01.T01:CDS | 40.0% | |
| GTAGTAGCTACATCATGTGT+AGG | + | Chr6:18611787-18611806 | MsG0680031342.01.T01:CDS | 40.0% | |
| TCCATTAGTCCTCCCAATTT+CGG | + | Chr6:18614630-18614649 | MsG0680031342.01.T01:CDS | 40.0% | |
| TGAGTAGGACTAAGGTAGTT+CGG | + | Chr6:18613042-18613061 | MsG0680031342.01.T01:intron | 40.0% | |
| TGCTTCAGGAACATAAGTGA+TGG | - | Chr6:18612076-18612095 | None:intergenic | 40.0% | |
| TGTTCATTGGCAATGGAACA+GGG | - | Chr6:18615050-18615069 | None:intergenic | 40.0% | |
| TTGTTCATTGGCAATGGAAC+AGG | - | Chr6:18615051-18615070 | None:intergenic | 40.0% | |
| ! | GCTTCATCAAGTGTTAGTCT+TGG | - | Chr6:18612114-18612133 | None:intergenic | 40.0% |
| ! | GGCTTTTGGATCTGGATTTA+AGG | + | Chr6:18614942-18614961 | MsG0680031342.01.T01:CDS | 40.0% |
| ! | GTATCTGAAAGTGATGGTGT+AGG | - | Chr6:18612249-18612268 | None:intergenic | 40.0% |
| ! | TGAGTTTAGCTCAGTTGGTT+GGG | + | Chr6:18613454-18613473 | MsG0680031342.01.T01:intron | 40.0% |
| ! | TGAGTTTTTCCGAAATTGGG+AGG | - | Chr6:18614642-18614661 | None:intergenic | 40.0% |
| !! | ACTCGGTGTTAAACTATCGA+AGG | + | Chr6:18614555-18614574 | MsG0680031342.01.T01:CDS | 40.0% |
| !! | ACTGATATTTTGAGCGGCTA+CGG | - | Chr6:18614453-18614472 | None:intergenic | 40.0% |
| !! | GATTTTAGAAAGGTCAGGTG+TGG | + | Chr6:18612047-18612066 | MsG0680031342.01.T01:CDS | 40.0% |
| !! | TCATCAAGTGTTAGTCTTGG+TGG | - | Chr6:18612111-18612130 | None:intergenic | 40.0% |
| !!! | ATTTTTTTTCGGTAGTGGCC+GGG | - | Chr6:18613521-18613540 | None:intergenic | 40.0% |
| CCTACTCTCAAGTCATCCAT+CGG | + | Chr6:18614426-18614445 | MsG0680031342.01.T01:CDS | 45.0% | |
| CCTTAGTCCTACTCAGATAC+GGG | - | Chr6:18613037-18613056 | None:intergenic | 45.0% | |
| CGATGGATGACTTGAGAGTA+GGG | - | Chr6:18614428-18614447 | None:intergenic | 45.0% | |
| CGTACACACATAACATCGCT+CGG | + | Chr6:18614607-18614626 | MsG0680031342.01.T01:CDS | 45.0% | |
| CTTTGCCAAACGTCTTCTTG+AGG | + | Chr6:18612356-18612375 | MsG0680031342.01.T01:CDS | 45.0% | |
| TCCGAAATTGGGAGGACTAA+TGG | - | Chr6:18614634-18614653 | None:intergenic | 45.0% | |
| TCTCTTTCGAATGGGTGGAT+CGG | + | Chr6:18614399-18614418 | MsG0680031342.01.T01:CDS | 45.0% | |
| ! | CAATTTTGCATGCATACGGG+CGG | + | Chr6:18614745-18614764 | MsG0680031342.01.T01:CDS | 45.0% |
| ! | GTGAGTTTAGCTCAGTTGGT+TGG | + | Chr6:18613453-18613472 | MsG0680031342.01.T01:intron | 45.0% |
| ! | TGGCAAATGGCTTTTGGATC+TGG | + | Chr6:18614934-18614953 | MsG0680031342.01.T01:CDS | 45.0% |
| !!! | TTTTTTTTCGGTAGTGGCCG+GGG | - | Chr6:18613520-18613539 | None:intergenic | 45.0% |
| !!! | ATATTTTTATTTTATCTAAA+AGG | + | Chr6:18612793-18612812 | MsG0680031342.01.T01:intron | 5.0% |
| !!! | TTTTTTATTTGTATAAATTT+GGG | - | Chr6:18613214-18613233 | None:intergenic | 5.0% |
| !!! | TTTTTTTATTTGTATAAATT+TGG | - | Chr6:18613215-18613234 | None:intergenic | 5.0% |
| ACCCTCAAGCTCCAACCTAT+AGG | + | Chr6:18613011-18613030 | MsG0680031342.01.T01:intron | 50.0% | |
| CCAACTGAGCTAAACTCACG+AGG | - | Chr6:18613452-18613471 | None:intergenic | 50.0% | |
| CCCGTATCTGAGTAGGACTA+AGG | + | Chr6:18613034-18613053 | MsG0680031342.01.T01:intron | 50.0% | |
| CCGATGGATGACTTGAGAGT+AGG | - | Chr6:18614429-18614448 | None:intergenic | 50.0% | |
| CTACTCAGATACGGGCCTAT+AGG | - | Chr6:18613029-18613048 | None:intergenic | 50.0% | |
| CTATAGGCCCGTATCTGAGT+AGG | + | Chr6:18613027-18613046 | MsG0680031342.01.T01:intron | 50.0% | |
| TCAGATACGGGCCTATAGGT+TGG | - | Chr6:18613025-18613044 | None:intergenic | 50.0% | |
| ! | CCTCGTGAGTTTAGCTCAGT+TGG | + | Chr6:18613449-18613468 | MsG0680031342.01.T01:intron | 50.0% |
| ! | GCCTATAGGTTGGAGCTTGA+GGG | - | Chr6:18613015-18613034 | None:intergenic | 50.0% |
| !! | CAGTGCTGGTGTTATTGCAG+TGG | + | Chr6:18612332-18612351 | MsG0680031342.01.T01:CDS | 50.0% |
| AAGATCCGGGGTTCAAACCC+CGG | + | Chr6:18613500-18613519 | MsG0680031342.01.T01:intron | 55.0% | |
| AGTGGTATGGGATGCAGTGC+TGG | + | Chr6:18612318-18612337 | MsG0680031342.01.T01:CDS | 55.0% | |
| CATTCGTTGCGCACTCACGT+AGG | + | Chr6:18614478-18614497 | MsG0680031342.01.T01:CDS | 55.0% | |
| GCGGTAGAGCGGTTCTTGAT+CGG | + | Chr6:18614764-18614783 | MsG0680031342.01.T01:CDS | 55.0% | |
| ! | GGCCTATAGGTTGGAGCTTG+AGG | - | Chr6:18613016-18613035 | None:intergenic | 55.0% |
| CATGCATACGGGCGGTAGAG+CGG | + | Chr6:18614753-18614772 | MsG0680031342.01.T01:CDS | 60.0% | |
| TTTGAGCGGCTACGGTCCGA+TGG | - | Chr6:18614445-18614464 | None:intergenic | 60.0% | |
| AGTGGCCGGGGTTTGAACCC+CGG | - | Chr6:18613508-18613527 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 18611660 | 18615345 | 18611660 | ID=MsG0680031342.01;Name=MsG0680031342.01 |
| Chr6 | mRNA | 18611660 | 18615345 | 18611660 | ID=MsG0680031342.01.T01;Parent=MsG0680031342.01;Name=MsG0680031342.01.T01;_AED=0.49;_eAED=0.49;_QI=64|1|1|1|1|1|2|256|479 |
| Chr6 | exon | 18611660 | 18612377 | 18611660 | ID=MsG0680031342.01.T01:exon:14743;Parent=MsG0680031342.01.T01 |
| Chr6 | exon | 18614304 | 18615345 | 18614304 | ID=MsG0680031342.01.T01:exon:14744;Parent=MsG0680031342.01.T01 |
| Chr6 | five_prime_UTR | 18611660 | 18611723 | 18611660 | ID=MsG0680031342.01.T01:five_prime_utr;Parent=MsG0680031342.01.T01 |
| Chr6 | CDS | 18611724 | 18612377 | 18611724 | ID=MsG0680031342.01.T01:cds;Parent=MsG0680031342.01.T01 |
| Chr6 | CDS | 18614304 | 18615089 | 18614304 | ID=MsG0680031342.01.T01:cds;Parent=MsG0680031342.01.T01 |
| Chr6 | three_prime_UTR | 18615090 | 18615345 | 18615090 | ID=MsG0680031342.01.T01:three_prime_utr;Parent=MsG0680031342.01.T01 |
| Gene Sequence |
| Protein sequence |
