AlfalfaGEDB | MsG0580024137.01

M. sativa cultivar ZhongmuNo.1 / MsG0580024137.01

KEGG: K03787
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024137.01.T01	XP_003610719.1	87.079	178	11	1	8	185	142	307	1.45E-107	320

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024137.01.T01	G7K2E3	87.079	178	11	1	8	185	142	307	6.94e-108	320

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000550.01	MsG0580024137.01	0.816240	6.123150e-52	4.315404e-49
MsG0180000673.01	MsG0580024137.01	0.817302	3.539284e-52	2.567813e-49
MsG0180001043.01	MsG0580024137.01	0.806411	8.334310e-50	4.520444e-47
MsG0180001663.01	MsG0580024137.01	0.803637	3.170147e-49	1.601242e-46
MsG0180002491.01	MsG0580024137.01	0.820755	5.799388e-53	4.629293e-50
MsG0180002912.01	MsG0580024137.01	0.826840	2.175074e-54	2.063408e-51
MsG0180003088.01	MsG0580024137.01	0.813265	2.793161e-51	1.815424e-48
MsG0180003864.01	MsG0580024137.01	0.805667	1.195058e-49	6.359859e-47
MsG0180004162.01	MsG0580024137.01	0.802282	6.041925e-49	2.947933e-46
MsG0180004388.01	MsG0580024137.01	0.809899	1.506506e-50	8.953440e-48
MsG0180005872.01	MsG0580024137.01	0.817258	3.620344e-52	2.623435e-49
MsG0180006016.01	MsG0580024137.01	0.865470	5.770377e-65	1.879476e-61
MsG0180006069.01	MsG0580024137.01	0.802552	5.313572e-49	2.610390e-46
MsG0280006356.01	MsG0580024137.01	0.821509	3.888994e-53	3.169972e-50
MsG0280006411.01	MsG0580024137.01	0.800365	1.491583e-48	6.932415e-46
MsG0280010614.01	MsG0580024137.01	0.815996	6.943216e-52	4.860703e-49
MsG0280011446.01	MsG0580024137.01	0.815279	1.002750e-51	6.883473e-49
MsG0380011754.01	MsG0580024137.01	0.809769	1.606300e-50	9.514891e-48
MsG0380014561.01	MsG0580024137.01	0.845403	4.150949e-59	6.909634e-56
MsG0380014573.01	MsG0580024137.01	0.803500	3.385103e-49	1.703816e-46
MsG0480018970.01	MsG0580024137.01	0.809705	1.657991e-50	9.804088e-48
MsG0480018998.01	MsG0580024137.01	0.818352	2.049750e-52	1.530796e-49
MsG0480019329.01	MsG0580024137.01	0.814522	1.475876e-51	9.926020e-49
MsG0480020090.01	MsG0580024137.01	0.828575	8.329201e-55	8.312017e-52
MsG0480020445.01	MsG0580024137.01	0.835887	1.291738e-56	1.600987e-53
MsG0480020886.01	MsG0580024137.01	0.806127	9.566527e-50	5.151447e-47
MsG0480021240.01	MsG0580024137.01	0.825854	3.735952e-54	3.446118e-51
MsG0480021731.01	MsG0580024137.01	0.807886	4.059662e-50	2.287617e-47
MsG0480022274.01	MsG0580024137.01	0.839095	1.945348e-57	2.658358e-54
MsG0480022479.01	MsG0580024137.01	0.807789	4.257047e-50	2.392887e-47
MsG0480022480.01	MsG0580024137.01	0.869903	2.183786e-66	8.333229e-63
MsG0480023088.01	MsG0580024137.01	0.837530	4.923020e-57	6.413370e-54
MsG0480023270.01	MsG0580024137.01	0.814335	1.623403e-51	1.086270e-48
MsG0580024073.01	MsG0580024137.01	0.837415	5.267887e-57	6.837718e-54
MsG0580024114.01	MsG0580024137.01	0.826447	2.699657e-54	2.532452e-51
MsG0580024137.01	MsG0580025134.01	0.825150	5.484826e-54	4.958860e-51
MsG0580024137.01	MsG0580025143.01	0.824056	9.922699e-54	8.693626e-51
MsG0580024137.01	MsG0580025989.01	0.801243	9.872965e-49	4.691916e-46
MsG0580024137.01	MsG0580026023.01	0.802917	4.467355e-49	2.215241e-46
MsG0580024137.01	MsG0580027034.01	0.805628	1.217824e-49	6.474491e-47
MsG0580024137.01	MsG0580027345.01	0.817773	2.771288e-52	2.036871e-49
MsG0580024137.01	MsG0580027773.01	0.828007	1.141770e-54	1.120777e-51
MsG0580024137.01	MsG0580028185.01	0.807709	4.428300e-50	2.483864e-47
MsG0580024137.01	MsG0580029189.01	0.812711	3.694198e-51	2.365815e-48
MsG0580024137.01	MsG0580029594.01	0.801806	7.568299e-49	3.648131e-46
MsG0580024137.01	MsG0680035777.01	0.806288	8.847176e-50	4.783721e-47
MsG0580024137.01	MsG0780038444.01	0.820331	7.258119e-53	5.725691e-50
MsG0580024137.01	MsG0780038495.01	0.838824	2.286469e-57	3.098665e-54
MsG0580024137.01	MsG0780038911.01	0.806949	6.415396e-50	3.528125e-47
MsG0580024137.01	MsG0780039985.01	0.804506	2.090954e-49	1.079934e-46
MsG0580024137.01	MsG0780040143.01	0.822063	2.893539e-53	2.395940e-50
MsG0580024137.01	MsG0780040280.01	0.805645	1.207906e-49	6.424611e-47
MsG0580024137.01	MsG0780040360.01	0.810318	1.223342e-50	7.350693e-48
MsG0580024137.01	MsG0780040442.01	0.857855	1.227932e-62	3.073243e-59
MsG0580024137.01	MsG0880043002.01	0.802821	4.677249e-49	2.313764e-46
MsG0580024137.01	MsG0880043082.01	0.801396	9.183091e-49	4.380749e-46
MsG0580024137.01	MsG0880043144.01	0.810444	1.148975e-50	6.926951e-48
MsG0580024137.01	MsG0880043262.01	0.813741	2.194875e-51	1.445177e-48
MsG0580024137.01	MsG0880043291.01	0.805656	1.201624e-49	6.392969e-47
MsG0580024137.01	MsG0880043745.01	0.836112	1.132556e-56	1.413351e-53
MsG0580024137.01	MsG0880045290.01	0.834703	2.571755e-56	3.075752e-53
MsG0580024137.01	MsG0880046058.01	0.828674	7.882196e-55	7.888444e-52
MsG0580024137.01	MsG0880046209.01	0.816444	5.512271e-52	3.906306e-49
MsG0580024137.01	MsG0880046669.01	0.807239	5.570619e-50	3.086753e-47
MsG0580024137.01	MsG0880046733.01	0.843913	1.045799e-58	1.660951e-55
MsG0580024137.01	MsG0880046753.01	0.832265	1.043354e-55	1.160036e-52
MsG0580024137.01	MsG0880047143.01	0.843539	1.317149e-58	2.067313e-55
MsG0580024137.01	MsG0880047191.01	0.806078	9.795987e-50	5.268410e-47
MsG0580024137.01	MsG0880047497.01	0.814605	1.414935e-51	9.537022e-49
MsG0380015181.01	MsG0580024137.01	0.819292	1.253970e-52	9.609792e-50
MsG0380015779.01	MsG0580024137.01	0.801633	8.212162e-49	3.941098e-46
MsG0380015931.01	MsG0580024137.01	0.804031	2.625535e-49	1.339669e-46
MsG0380016859.01	MsG0580024137.01	0.818548	1.851231e-52	1.389950e-49
MsG0380017286.01	MsG0580024137.01	0.843922	1.040253e-58	1.652643e-55
MsG0380017403.01	MsG0580024137.01	0.809988	1.441020e-50	8.584888e-48
MsG0380017680.01	MsG0580024137.01	0.821482	3.944078e-53	3.212641e-50
MsG0280006595.01	MsG0580024137.01	0.828633	8.064997e-55	8.061896e-52
MsG0280007253.01	MsG0580024137.01	0.811204	7.870875e-51	4.842018e-48
MsG0280007564.01	MsG0580024137.01	0.812612	3.884584e-51	2.481213e-48
MsG0280007610.01	MsG0580024137.01	0.825271	5.134270e-54	4.657710e-51
MsG0280010389.01	MsG0580024137.01	0.803687	3.094900e-49	1.565236e-46
MsG0280010416.01	MsG0580024137.01	0.849801	2.560901e-60	4.912350e-57

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024137.01.T01	MTR_5g006290	87.079	178	11	1	8	185	142	307	1.76e-111	320
MsG0580024137.01.T01	MTR_1g104500	58.989	178	61	1	8	185	141	306	8.14e-73	222
MsG0580024137.01.T01	MTR_5g006290	82.787	122	9	1	8	129	142	251	1.19e-67	207
MsG0580024137.01.T01	MTR_5g006300	71.094	128	25	1	2	129	135	250	8.22e-61	191
MsG0580024137.01.T01	MTR_1g104513	54.430	79	35	1	84	162	1	78	9.47e-22	87.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024137.01.T01	AT4G14930	45.810	179	78	4	10	184	150	313	1.03e-47	158
MsG0580024137.01.T01	AT4G14930	42.949	156	69	5	10	160	150	290	1.87e-35	126

Find 50 sgRNAs with CRISPR-Local

Find 162 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCTTCTGTAGCTAATTTAT+TGG	0.193421	5:-1275969	MsG0580024137.01.T01:intron
GTTAGTATTTACTTGATAAA+TGG	0.251021	5:-1274932	MsG0580024137.01.T01:three_prime_UTR
GCTGCCGACGAGAGGTGTTT+AGG	0.296045	5:+1275197	None:intergenic
GTCGTCTGTGCATCTGAAAA+AGG	0.303056	5:-1275944	MsG0580024137.01.T01:CDS
TCTCGAGTATTATGGCTTAC+TGG	0.322512	5:-1277395	None:intergenic
AAATGTTCGCAAAAGTCATT+TGG	0.332318	5:+1274990	None:intergenic
CTCTGATTGCAATGTATTCC+TGG	0.343354	5:-1275127	MsG0580024137.01.T01:three_prime_UTR
CTGCCGACGAGAGGTGTTTA+GGG	0.359627	5:+1275198	None:intergenic
CTCGCAAATAAAAGATGTTC+AGG	0.372141	5:+1275775	None:intergenic
ACCAGTACTGAGTTTATGAT+TGG	0.387156	5:+1277220	None:intergenic
TTGTAGCCAATCCTCAAAAT+AGG	0.388766	5:+1275226	None:intergenic
AGGTGTATCTGTATCTGTAT+TGG	0.416137	5:+1275825	None:intergenic
CTGTGGTGAATGGAAAATTC+TGG	0.422490	5:-1275048	MsG0580024137.01.T01:three_prime_UTR
GGTTATTCTTCTGTGGTGAA+TGG	0.429086	5:-1275058	MsG0580024137.01.T01:three_prime_UTR
TATTCTATGTCCAGGGTTGA+AGG	0.439800	5:-1277289	MsG0580024137.01.T01:intron
GGGTTACAAGCTAACGAGGC+AGG	0.444468	5:-1275923	MsG0580024137.01.T01:CDS
ATTACTGTAACTGCTCTTGC+TGG	0.445809	5:-1275278	MsG0580024137.01.T01:CDS
TCTGTATCATCATCATAATC+AGG	0.448757	5:+1275406	None:intergenic
AATGTTCGCAAAAGTCATTT+GGG	0.459315	5:+1274991	None:intergenic
TACCTTATGGTTAGCAACAT+TGG	0.464242	5:+1277141	None:intergenic
GGGTAGAAGTATCTTTAAGA+TGG	0.488404	5:-1275902	MsG0580024137.01.T01:CDS
GAAGTATCTTTAAGATGGGA+TGG	0.499334	5:-1275897	MsG0580024137.01.T01:CDS
AACCAATGTTGCTAACCATA+AGG	0.509023	5:-1277143	MsG0580024137.01.T01:intron
TCCAATCATAAACTCAGTAC+TGG	0.516828	5:-1277221	MsG0580024137.01.T01:CDS
TTATGGTTAGCAACATTGGT+TGG	0.519228	5:+1277145	None:intergenic
ATCACGCTAGTTAAGAATCA+AGG	0.519247	5:-1275079	MsG0580024137.01.T01:three_prime_UTR
TACAGATCACAAATCTTTGA+AGG	0.525967	5:-1275389	MsG0580024137.01.T01:CDS
TATCATCATCATAATCAGGT+AGG	0.530713	5:+1275410	None:intergenic
ATGCAAGTGCAATTATTGCC+AGG	0.533282	5:+1275109	None:intergenic
GGTAGAAGTATCTTTAAGAT+GGG	0.551902	5:-1275901	MsG0580024137.01.T01:CDS
GATCACAAATCTTTGAAGGC+GGG	0.566869	5:-1275385	MsG0580024137.01.T01:CDS
GAATCAAGGTTATTCTTCTG+TGG	0.569175	5:-1275065	MsG0580024137.01.T01:three_prime_UTR
AATGCAAACTTGTGCAGCAA+GGG	0.572061	5:+1277243	None:intergenic
ATAAAGAAACAAAGCTACCC+TGG	0.585747	5:-1277193	MsG0580024137.01.T01:CDS
ACTTGATAAATGGTGAATTG+TGG	0.588929	5:-1274922	MsG0580024137.01.T01:three_prime_UTR
ATCATCATCATAATCAGGTA+GGG	0.598459	5:+1275411	None:intergenic
GGTTACAAGCTAACGAGGCA+GGG	0.611674	5:-1275922	MsG0580024137.01.T01:CDS
GAATGCAAACTTGTGCAGCA+AGG	0.611800	5:+1277242	None:intergenic
ATTATAAAGCTGCCGACGAG+AGG	0.616494	5:+1275189	None:intergenic
TGAAGGAAAGAGTAATCCAC+GGG	0.631991	5:-1277272	MsG0580024137.01.T01:CDS
CAAGTCACCTCTGAGACAGA+AGG	0.641811	5:-1275871	MsG0580024137.01.T01:CDS
TCTTCGTCCTTCTGTCTCAG+AGG	0.641863	5:+1275864	None:intergenic
GCAGCAAGGGCAAAGTCCCG+TGG	0.646391	5:+1277256	None:intergenic
TTGAAGGAAAGAGTAATCCA+CGG	0.648842	5:-1277273	MsG0580024137.01.T01:CDS
GGTGAATGGAAAATTCTGGC+AGG	0.654231	5:-1275044	MsG0580024137.01.T01:three_prime_UTR
TATCCCTAAACACCTCTCGT+CGG	0.656627	5:-1275201	MsG0580024137.01.T01:CDS
AGATCACAAATCTTTGAAGG+CGG	0.659879	5:-1275386	MsG0580024137.01.T01:CDS
TCTTGCTGGTCTCTCTCATG+CGG	0.662540	5:-1275264	MsG0580024137.01.T01:CDS
GTATCTTTAAGATGGGATGG+AGG	0.672647	5:-1275894	MsG0580024137.01.T01:CDS
AAAAGGGTTACAAGCTAACG+AGG	0.689847	5:-1275927	MsG0580024137.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAATTTTTTATTGTTACTTT+AGG	-	Chr5:1275460-1275479	MsG0580024137.01.T01:intron	10.0%
!!	ATATTAAATGAAAATACAGA+AGG	+	Chr5:1276226-1276245	None:intergenic	15.0%
!!!	AGAATATAATCAATTTTCTT+AGG	+	Chr5:1275553-1275572	None:intergenic	15.0%
!!	AAATGTAAACTTCAATATGT+AGG	+	Chr5:1276249-1276268	None:intergenic	20.0%
!!	AACTACATTATTATTCATTG+CGG	+	Chr5:1276833-1276852	None:intergenic	20.0%
!!	AAGATTTATATGACAATTTC+TGG	+	Chr5:1275601-1275620	None:intergenic	20.0%
!!	AATAAGCATAATACATGATA+AGG	-	Chr5:1275381-1275400	MsG0580024137.01.T01:CDS	20.0%
!!	ACTTATTACAATATACCTTA+TGG	+	Chr5:1275171-1275190	None:intergenic	20.0%
!!	GATTTATTCATAATATATGC+TGG	-	Chr5:1275405-1275424	MsG0580024137.01.T01:CDS	20.0%
!!	GTTAGTATTTACTTGATAAA+TGG	-	Chr5:1277364-1277383	MsG0580024137.01.T01:intron	20.0%
!!!	TGTGTGTTATTATAATTTGA+GGG	-	Chr5:1275767-1275786	MsG0580024137.01.T01:intron	20.0%
!!!	TTGTGTGTTATTATAATTTG+AGG	-	Chr5:1275766-1275785	MsG0580024137.01.T01:intron	20.0%
!!!	TTTTTTCTTCAAACTTTTGT+AGG	-	Chr5:1276853-1276872	MsG0580024137.01.T01:intron	20.0%
!	AACATAAATTAATGCTGTGA+TGG	-	Chr5:1275358-1275377	MsG0580024137.01.T01:intron	25.0%
!	AACTAAAAAACTTACTTGGA+TGG	-	Chr5:1276777-1276796	MsG0580024137.01.T01:intron	25.0%
!	AAGTTTACATTTGTAGTCAA+AGG	-	Chr5:1276257-1276276	MsG0580024137.01.T01:intron	25.0%
!	AGCATATTGTCTAATACTTT+CGG	-	Chr5:1276606-1276625	MsG0580024137.01.T01:intron	25.0%
!	ATATTCAAAAAACATCTTCC+AGG	+	Chr5:1275124-1275143	None:intergenic	25.0%
!	ATCTTCTGTAGCTAATTTAT+TGG	-	Chr5:1276327-1276346	MsG0580024137.01.T01:intron	25.0%
!	ATTATGCAACATTTCAATGA+AGG	+	Chr5:1276112-1276131	None:intergenic	25.0%
!	GAAGAACTAAAAAACTTACT+TGG	-	Chr5:1276773-1276792	MsG0580024137.01.T01:intron	25.0%
!	GTATATATTGTCATGATATC+AGG	+	Chr5:1276005-1276024	None:intergenic	25.0%
!	TACTCAAATAAACAAACACA+CGG	+	Chr5:1275887-1275906	None:intergenic	25.0%
!	TATTCAAAAAACATCTTCCA+GGG	+	Chr5:1275123-1275142	None:intergenic	25.0%
!	TCATTGAAATGTTGCATAAT+GGG	-	Chr5:1276112-1276131	MsG0580024137.01.T01:intron	25.0%
!	TGAAAAGCTATTGCTATAAA+AGG	+	Chr5:1274962-1274981	None:intergenic	25.0%
!	TTATGCAACATTTCAATGAA+GGG	+	Chr5:1276111-1276130	None:intergenic	25.0%
!	TTCATTGAAATGTTGCATAA+TGG	-	Chr5:1276111-1276130	MsG0580024137.01.T01:intron	25.0%
!	TTGTTTATTTGAGTATGTGT+TGG	-	Chr5:1275892-1275911	MsG0580024137.01.T01:CDS	25.0%
!!	AATTTGACAGGCATTATTTT+AGG	-	Chr5:1275484-1275503	MsG0580024137.01.T01:intron	25.0%
!!	ATAGCAAATTTTTATCCTTG+TGG	-	Chr5:1275926-1275945	MsG0580024137.01.T01:CDS	25.0%
!!!	TTTAGTTCTTCCATATAACT+TGG	+	Chr5:1276764-1276783	None:intergenic	25.0%
	AAATGTTCGCAAAAGTCATT+TGG	+	Chr5:1277309-1277328	None:intergenic	30.0%
	AACTTACGCACAATAAAACT+TGG	+	Chr5:1275578-1275597	None:intergenic	30.0%
	AATGTTCGCAAAAGTCATTT+GGG	+	Chr5:1277308-1277327	None:intergenic	30.0%
	ACAGATACACCTAAAAACTT+TGG	-	Chr5:1276482-1276501	MsG0580024137.01.T01:intron	30.0%
	ACTCAAATAAACAAACACAC+GGG	+	Chr5:1275886-1275905	None:intergenic	30.0%
	ACTTGATAAATGGTGAATTG+TGG	-	Chr5:1277374-1277393	MsG0580024137.01.T01:intron	30.0%
	ATATAACTACCGTGATTTCA+TGG	+	Chr5:1275652-1275671	None:intergenic	30.0%
	ATCATCATCATAATCAGGTA+GGG	+	Chr5:1276888-1276907	None:intergenic	30.0%
	CCAAAACAATAAATTCCACA+AGG	+	Chr5:1275944-1275963	None:intergenic	30.0%
	CTAGTTAACTCCTTATGAAA+GGG	+	Chr5:1275692-1275711	None:intergenic	30.0%
	CTTTCCACTAATTTACAATG+CGG	+	Chr5:1276030-1276049	None:intergenic	30.0%
	GAAATAGATGCCAAGTTATA+TGG	-	Chr5:1276751-1276770	MsG0580024137.01.T01:intron	30.0%
	GCATTGTAAATTAGTGGAAA+GGG	-	Chr5:1276029-1276048	MsG0580024137.01.T01:intron	30.0%
	TACAGATCACAAATCTTTGA+AGG	-	Chr5:1276907-1276926	MsG0580024137.01.T01:intron	30.0%
	TAGTCAAGCACATTATTAAG+CGG	+	Chr5:1276663-1276682	None:intergenic	30.0%
	TAGTTAACTCCTTATGAAAG+GGG	+	Chr5:1275691-1275710	None:intergenic	30.0%
	TATCATCATCATAATCAGGT+AGG	+	Chr5:1276889-1276908	None:intergenic	30.0%
	TATCATGTTTGACCATTTGA+AGG	-	Chr5:1274983-1275002	MsG0580024137.01.T01:three_prime_UTR	30.0%
	TATGCAACATTTCAATGAAG+GGG	+	Chr5:1276110-1276129	None:intergenic	30.0%
	TATGTTAAGCGATCAAAACA+CGG	+	Chr5:1275339-1275358	None:intergenic	30.0%
	TCTAGTTAACTCCTTATGAA+AGG	+	Chr5:1275693-1275712	None:intergenic	30.0%
	TCTGTATCATCATCATAATC+AGG	+	Chr5:1276893-1276912	None:intergenic	30.0%
	TTATTATTCATTGCGGAAAG+AGG	+	Chr5:1276826-1276845	None:intergenic	30.0%
!	AACAGCATCTTTTTGTAACA+AGG	+	Chr5:1276142-1276161	None:intergenic	30.0%
!	ACAGCATCTTTTTGTAACAA+GGG	+	Chr5:1276141-1276160	None:intergenic	30.0%
!	CCTTGTGGAATTTATTGTTT+TGG	-	Chr5:1275941-1275960	MsG0580024137.01.T01:CDS	30.0%
!	GATGATGTACCAAAGTTTTT+AGG	+	Chr5:1276494-1276513	None:intergenic	30.0%
!	GTTACTTTAGGTAATTTGAC+AGG	-	Chr5:1275472-1275491	MsG0580024137.01.T01:intron	30.0%
!	TTCAAACTTTTGTAGGTAAG+AGG	-	Chr5:1276860-1276879	MsG0580024137.01.T01:intron	30.0%
!!	GGTAGAAGTATCTTTAAGAT+GGG	-	Chr5:1276395-1276414	MsG0580024137.01.T01:intron	30.0%
	AACCAATGTTGCTAACCATA+AGG	-	Chr5:1275153-1275172	MsG0580024137.01.T01:three_prime_UTR	35.0%
	ACATGGTGTCTCCTATTAAT+AGG	+	Chr5:1275518-1275537	None:intergenic	35.0%
	ACTACCGCATTGTAAATTAG+TGG	-	Chr5:1276023-1276042	MsG0580024137.01.T01:intron	35.0%
	AGGACTATAGCCCTATTAAT+AGG	-	Chr5:1275504-1275523	MsG0580024137.01.T01:intron	35.0%
	AGGTGTATCTGTATCTGTAT+TGG	+	Chr5:1276474-1276493	None:intergenic	35.0%
	ATAAAGAAACAAAGCTACCC+TGG	-	Chr5:1275103-1275122	MsG0580024137.01.T01:three_prime_UTR	35.0%
	ATCACGCTAGTTAAGAATCA+AGG	-	Chr5:1277217-1277236	MsG0580024137.01.T01:CDS	35.0%
	ATGCAACATTTCAATGAAGG+GGG	+	Chr5:1276109-1276128	None:intergenic	35.0%
	CATGGTGTCTCCTATTAATA+GGG	+	Chr5:1275517-1275536	None:intergenic	35.0%
	CGCATTGTAAATTAGTGGAA+AGG	-	Chr5:1276028-1276047	MsG0580024137.01.T01:intron	35.0%
	CGGTAGTTATATCCAAAGAA+TGG	-	Chr5:1275660-1275679	MsG0580024137.01.T01:intron	35.0%
	CTCAAATAAACAAACACACG+GGG	+	Chr5:1275885-1275904	None:intergenic	35.0%
	CTCGCAAATAAAAGATGTTC+AGG	+	Chr5:1276524-1276543	None:intergenic	35.0%
	GAATCAAGGTTATTCTTCTG+TGG	-	Chr5:1277231-1277250	MsG0580024137.01.T01:CDS	35.0%
	GACATAGAATAGCCTTCAAA+TGG	+	Chr5:1274998-1275017	None:intergenic	35.0%
	TACCTTATGGTTAGCAACAT+TGG	+	Chr5:1275158-1275177	None:intergenic	35.0%
	TCCAATCATAAACTCAGTAC+TGG	-	Chr5:1275075-1275094	MsG0580024137.01.T01:three_prime_UTR	35.0%
	TTAGGCTTGTCTCTAATACA+TGG	+	Chr5:1275535-1275554	None:intergenic	35.0%
	TTATGGTTAGCAACATTGGT+TGG	+	Chr5:1275154-1275173	None:intergenic	35.0%
	TTGAAGGAAAGAGTAATCCA+CGG	-	Chr5:1275023-1275042	MsG0580024137.01.T01:three_prime_UTR	35.0%
	TTGTAGCCAATCCTCAAAAT+AGG	+	Chr5:1277073-1277092	None:intergenic	35.0%
!	ACCAGTACTGAGTTTATGAT+TGG	+	Chr5:1275079-1275098	None:intergenic	35.0%
!	AGATCACAAATCTTTGAAGG+CGG	-	Chr5:1276910-1276929	MsG0580024137.01.T01:intron	35.0%
!	AGATTGTCAGACCTATTTTG+AGG	-	Chr5:1277059-1277078	MsG0580024137.01.T01:intron	35.0%
!	ATTTTCTTAACCAGTGAACG+AGG	+	Chr5:1275740-1275759	None:intergenic	35.0%
!	TTGAAATGTTGCATAATGGG+CGG	-	Chr5:1276115-1276134	MsG0580024137.01.T01:intron	35.0%
!!	AAAATTTGCTATTCGACCAG+TGG	+	Chr5:1275918-1275937	None:intergenic	35.0%
!!	ACATCTTTTATTTGCGAGAG+AGG	-	Chr5:1276526-1276545	MsG0580024137.01.T01:intron	35.0%
!!	GAAGTATCTTTAAGATGGGA+TGG	-	Chr5:1276399-1276418	MsG0580024137.01.T01:intron	35.0%
!!	GGGTAGAAGTATCTTTAAGA+TGG	-	Chr5:1276394-1276413	MsG0580024137.01.T01:intron	35.0%
!!	GGTTCTAAGATGATTCTCTT+AGG	-	Chr5:1275426-1275445	MsG0580024137.01.T01:intron	35.0%
	AAAAGGGTTACAAGCTAACG+AGG	-	Chr5:1276369-1276388	MsG0580024137.01.T01:intron	40.0%
	AAACCACTAGGTTGCAACAT+CGG	+	Chr5:1275805-1275824	None:intergenic	40.0%
	AAAGGGGAATTGCCATTCTT+TGG	+	Chr5:1275675-1275694	None:intergenic	40.0%
	AATAAACAAACACACGGGGA+TGG	+	Chr5:1275881-1275900	None:intergenic	40.0%
	AATGCAAACTTGTGCAGCAA+GGG	+	Chr5:1275056-1275075	None:intergenic	40.0%
	ACATTTCAATGAAGGGGGAA+AGG	+	Chr5:1276104-1276123	None:intergenic	40.0%
	AGGAGTTAACTAGACCTATC+TGG	-	Chr5:1275699-1275718	MsG0580024137.01.T01:intron	40.0%
	ATAAACAAACACACGGGGAT+GGG	+	Chr5:1275880-1275899	None:intergenic	40.0%
	ATGCAAGTGCAATTATTGCC+AGG	+	Chr5:1277190-1277209	None:intergenic	40.0%
	ATGGCAATTCCCCTTTCATA+AGG	-	Chr5:1275679-1275698	MsG0580024137.01.T01:intron	40.0%
	ATTACTCTTTCCTTCAACCC+TGG	+	Chr5:1275020-1275039	None:intergenic	40.0%
	ATTACTGTAACTGCTCTTGC+TGG	-	Chr5:1277018-1277037	MsG0580024137.01.T01:intron	40.0%
	CTCTGATTGCAATGTATTCC+TGG	-	Chr5:1277169-1277188	MsG0580024137.01.T01:CDS	40.0%
	CTGTGGTGAATGGAAAATTC+TGG	-	Chr5:1277248-1277267	MsG0580024137.01.T01:CDS	40.0%
	GGTTATTCTTCTGTGGTGAA+TGG	-	Chr5:1277238-1277257	MsG0580024137.01.T01:CDS	40.0%
	GTCTTTCGTAATCACCAGAT+AGG	+	Chr5:1275716-1275735	None:intergenic	40.0%
	GTGTTGAGCTGTTGATATGT+TGG	-	Chr5:1276188-1276207	MsG0580024137.01.T01:intron	40.0%
	TAACTACCGTGATTTCATGG+AGG	+	Chr5:1275649-1275668	None:intergenic	40.0%
	TATTCTATGTCCAGGGTTGA+AGG	-	Chr5:1275007-1275026	MsG0580024137.01.T01:three_prime_UTR	40.0%
	TCGTCTGTGCATCTGAAAAA+GGG	-	Chr5:1276353-1276372	MsG0580024137.01.T01:intron	40.0%
	TGAAAACATTTGATGTGCCC+AGG	-	Chr5:1275830-1275849	MsG0580024137.01.T01:CDS	40.0%
	TGAAGGAAAGAGTAATCCAC+GGG	-	Chr5:1275024-1275043	MsG0580024137.01.T01:three_prime_UTR	40.0%
	TGAAGGCTATTCTATGTCCA+GGG	-	Chr5:1275000-1275019	MsG0580024137.01.T01:three_prime_UTR	40.0%
	TTGAAGGCTATTCTATGTCC+AGG	-	Chr5:1274999-1275018	MsG0580024137.01.T01:three_prime_UTR	40.0%
!	CCATCAATCCTTTTCCTACT+CGG	+	Chr5:1275245-1275264	None:intergenic	40.0%
!	GATCACAAATCTTTGAAGGC+GGG	-	Chr5:1276911-1276930	MsG0580024137.01.T01:intron	40.0%
!!	CTTTTATTTGCGAGAGAGGT+AGG	-	Chr5:1276530-1276549	MsG0580024137.01.T01:intron	40.0%
!!	GTATCTTTAAGATGGGATGG+AGG	-	Chr5:1276402-1276421	MsG0580024137.01.T01:intron	40.0%
!!	GTCAGACCTATTTTGAGGAT+TGG	-	Chr5:1277064-1277083	MsG0580024137.01.T01:intron	40.0%
	AACCACTAGGTTGCAACATC+GGG	+	Chr5:1275804-1275823	None:intergenic	45.0%
	ATTATAAAGCTGCCGACGAG+AGG	+	Chr5:1277110-1277129	None:intergenic	45.0%
	CCGAGTAGGAAAAGGATTGA+TGG	-	Chr5:1275242-1275261	MsG0580024137.01.T01:CDS	45.0%
	GAATGCAAACTTGTGCAGCA+AGG	+	Chr5:1275057-1275076	None:intergenic	45.0%
	GAGGTTGACTAGTGACTACA+TGG	+	Chr5:1275221-1275240	None:intergenic	45.0%
	GATGTTGCAACCTAGTGGTT+TGG	-	Chr5:1275804-1275823	MsG0580024137.01.T01:CDS	45.0%
	GGTGAATGGAAAATTCTGGC+AGG	-	Chr5:1277252-1277271	MsG0580024137.01.T01:CDS	45.0%
	GTCGTCTGTGCATCTGAAAA+AGG	-	Chr5:1276352-1276371	MsG0580024137.01.T01:intron	45.0%
	GTGCTTGACTATGCTCTCAT+TGG	-	Chr5:1276672-1276691	MsG0580024137.01.T01:intron	45.0%
	TAAACAAACACACGGGGATG+GGG	+	Chr5:1275879-1275898	None:intergenic	45.0%
	TATCCCTAAACACCTCTCGT+CGG	-	Chr5:1277095-1277114	MsG0580024137.01.T01:intron	45.0%
!	GTTTTCACCACCAAACCACT+AGG	+	Chr5:1275817-1275836	None:intergenic	45.0%
!	TTTGAGTATGTGTTGGCCAC+TGG	-	Chr5:1275899-1275918	MsG0580024137.01.T01:CDS	45.0%
!!	AATCCTTTTCCTACTCGGTG+AGG	+	Chr5:1275240-1275259	None:intergenic	45.0%
	ACCACTAGGTTGCAACATCG+GGG	+	Chr5:1275803-1275822	None:intergenic	50.0%
	ACGAAAGACTCCTCGTTCAC+TGG	-	Chr5:1275727-1275746	MsG0580024137.01.T01:intron	50.0%
	ACTAGTCAACCTCACCGAGT+AGG	-	Chr5:1275228-1275247	MsG0580024137.01.T01:CDS	50.0%
	CAACCTCACCGAGTAGGAAA+AGG	-	Chr5:1275234-1275253	MsG0580024137.01.T01:CDS	50.0%
	GCGATCAAAACACGGCTATC+TGG	+	Chr5:1275331-1275350	None:intergenic	50.0%
	GGTTACAAGCTAACGAGGCA+GGG	-	Chr5:1276374-1276393	MsG0580024137.01.T01:intron	50.0%
	GTGGAAAGGGTGACTACTTC+TGG	-	Chr5:1276042-1276061	MsG0580024137.01.T01:intron	50.0%
	TCTTCGTCCTTCTGTCTCAG+AGG	+	Chr5:1276435-1276454	None:intergenic	50.0%
	TGCACACTCTACAAGCAGAG+AGG	+	Chr5:1276074-1276093	None:intergenic	50.0%
!	GTTGCAACCTAGTGGTTTGG+TGG	-	Chr5:1275807-1275826	MsG0580024137.01.T01:CDS	50.0%
!	TCTTGCTGGTCTCTCTCATG+CGG	-	Chr5:1277032-1277051	MsG0580024137.01.T01:intron	50.0%
!!	CAAGTCACCTCTGAGACAGA+AGG	-	Chr5:1276425-1276444	MsG0580024137.01.T01:intron	50.0%
	ACCGTGATTTCATGGAGGCG+AGG	+	Chr5:1275644-1275663	None:intergenic	55.0%
	ATGGGGAAATGTGGTGACCC+TGG	+	Chr5:1275862-1275881	None:intergenic	55.0%
	ATGTGCCCAGGTTCGAACCA+GGG	-	Chr5:1275842-1275861	MsG0580024137.01.T01:CDS	55.0%
	CATTGCGGAAAGAGGATGCG+AGG	+	Chr5:1276818-1276837	None:intergenic	55.0%
	GCCTCGCCTCCATGAAATCA+CGG	-	Chr5:1275640-1275659	MsG0580024137.01.T01:intron	55.0%
	GGGTTACAAGCTAACGAGGC+AGG	-	Chr5:1276373-1276392	MsG0580024137.01.T01:intron	55.0%
	TCCCCGATGTTGCAACCTAG+TGG	-	Chr5:1275799-1275818	MsG0580024137.01.T01:CDS	55.0%
!!	CTGCCGACGAGAGGTGTTTA+GGG	+	Chr5:1277101-1277120	None:intergenic	55.0%
	CACACGGGGATGGGGAAATG+TGG	+	Chr5:1275871-1275890	None:intergenic	60.0%
	GATGTGCCCAGGTTCGAACC+AGG	-	Chr5:1275841-1275860	MsG0580024137.01.T01:CDS	60.0%
!	GGTGACCCTGGTTCGAACCT+GGG	+	Chr5:1275850-1275869	None:intergenic	60.0%
!	TGGTGACCCTGGTTCGAACC+TGG	+	Chr5:1275851-1275870	None:intergenic	60.0%
!!	GCTGCCGACGAGAGGTGTTT+AGG	+	Chr5:1277102-1277121	None:intergenic	60.0%
	GCAGCAAGGGCAAAGTCCCG+TGG	+	Chr5:1275043-1275062	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	1274912	1277406	1274912	ID=MsG0580024137.01;Name=MsG0580024137.01
Chr5	mRNA	1274912	1277406	1274912	ID=MsG0580024137.01.T01;Parent=MsG0580024137.01;Name=MsG0580024137.01.T01;_AED=0.48;_eAED=0.50;_QI=0\|0.5\|0.6\|1\|0.75\|0.8\|5\|278\|185
Chr5	exon	1274912	1275300	1274912	ID=MsG0580024137.01.T01:exon:380;Parent=MsG0580024137.01.T01
Chr5	exon	1275381	1275443	1275381	ID=MsG0580024137.01.T01:exon:379;Parent=MsG0580024137.01.T01
Chr5	exon	1275771	1275980	1275771	ID=MsG0580024137.01.T01:exon:378;Parent=MsG0580024137.01.T01
Chr5	exon	1277144	1277297	1277144	ID=MsG0580024137.01.T01:exon:377;Parent=MsG0580024137.01.T01
Chr5	exon	1277387	1277406	1277387	ID=MsG0580024137.01.T01:exon:376;Parent=MsG0580024137.01.T01
Chr5	CDS	1277387	1277406	1277387	ID=MsG0580024137.01.T01:cds;Parent=MsG0580024137.01.T01
Chr5	CDS	1277144	1277297	1277144	ID=MsG0580024137.01.T01:cds;Parent=MsG0580024137.01.T01
Chr5	CDS	1275771	1275980	1275771	ID=MsG0580024137.01.T01:cds;Parent=MsG0580024137.01.T01
Chr5	CDS	1275381	1275443	1275381	ID=MsG0580024137.01.T01:cds;Parent=MsG0580024137.01.T01
Chr5	CDS	1275190	1275300	1275190	ID=MsG0580024137.01.T01:cds;Parent=MsG0580024137.01.T01
Chr5	three_prime_UTR	1274912	1275189	1274912	ID=MsG0580024137.01.T01:three_prime_utr;Parent=MsG0580024137.01.T01

Gene Sequence

>MsG0580024137.01.T01

ATGGCTTACTGGCTTTATAAGGTTGAAGGAAAGAGTAATCCACGGGACTTTGCCCTTGCTGCACAAGTTTGCATTCCAATCATAAACTCAGTACTGGTTGCGATAAAGAAACAAAGCTACCCTGGAAGATGTTTTTTGAATATAGACGTGCCAACCAATGTTGCTAACCATAAGCTAATTTATTGGTTGTCGTCTGTGCATCTGAAAAAGGGTTACAAGCTAACGAGGCAGGGTAGAAGTATCTTTAAGATGGGATGGAGGCAAGTCACCTCTGAGACAGAAGGACGAAGAATGTCGTCTGATATGACCAATACAGATACAGATACACCTAAAAACTTTGGTACATCATCTGCATCACCTGAACATCTTTTATTTGCGAGAGAGGTAAGAGGCGCCCTACCTGATTATGATGATGATACAGATCACAAATCTTTGAAGGCGGGCTATATTACTGTAACTGCTCTTGCTGGTCTCTCTCATGCGGATGTAGATTGTCAGACCTATTTTGAGGATTGGCTACAAAGTATCCCTAAACACCTCTCGTCGGCAGCTTTATAA

Protein sequence

>MsG0580024137.01.T01

MAYWLYKVEGKSNPRDFALAAQVCIPIINSVLVAIKKQSYPGRCFLNIDVPTNVANHKLIYWLSSVHLKKGYKLTRQGRSIFKMGWRQVTSETEGRRMSSDMTNTDTDTPKNFGTSSASPEHLLFAREVRGALPDYDDDTDHKSLKAGYITVTALAGLSHADVDCQTYFEDWLQSIPKHLSSAAL*