AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046676.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046676.01.T01 MTR_4g111985 99.200 125 1 0 9 133 276 400 8.47e-82 261
MsG0880046676.01.T01 MTR_4g111985 82.432 74 13 0 194 267 390 463 1.58e-33 132
MsG0880046676.01.T01 MTR_4g111985 99.200 125 1 0 9 133 315 439 4.59e-81 263
MsG0880046676.01.T01 MTR_4g111985 56.275 247 36 5 195 441 430 604 8.45e-72 238
MsG0880046676.01.T01 MTR_4g111985 99.200 125 1 0 9 133 276 400 6.83e-81 261
MsG0880046676.01.T01 MTR_4g111985 56.680 247 35 5 195 441 391 565 6.35e-73 240
MsG0880046676.01.T01 MTR_4g109500 50.000 114 53 1 16 125 108 221 1.29e-26 113
MsG0880046676.01.T01 MTR_4g109500 59.322 59 24 0 207 265 234 292 4.38e-17 84.3
MsG0880046676.01.T01 MTR_4g109500 50.000 114 53 1 16 125 108 221 1.36e-26 113
MsG0880046676.01.T01 MTR_4g109500 59.322 59 24 0 207 265 234 292 4.51e-17 84.0
MsG0880046676.01.T01 MTR_8g093800 45.238 126 64 4 9 133 152 273 9.61e-22 97.4
MsG0880046676.01.T01 MTR_2g087270 40.146 137 79 2 15 148 113 249 1.30e-19 90.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046676.01.T01 AT3G18520 84.921 126 19 0 8 133 228 353 7.99e-53 184
MsG0880046676.01.T01 AT3G18520 86.667 60 8 0 208 267 357 416 2.76e-27 114
MsG0880046676.01.T01 AT3G18520 84.921 126 19 0 8 133 228 353 9.71e-53 185
MsG0880046676.01.T01 AT3G18520 42.979 235 59 7 208 440 357 518 2.33e-38 145
MsG0880046676.01.T01 AT3G18520 84.921 126 19 0 8 133 228 353 1.02e-52 186
MsG0880046676.01.T01 AT3G18520 42.797 236 60 7 208 441 357 519 2.30e-38 146
MsG0880046676.01.T01 AT3G18520 84.921 126 19 0 8 133 228 353 1.52e-52 185
MsG0880046676.01.T01 AT3G18520 42.017 238 63 7 208 443 357 521 8.70e-38 145
MsG0880046676.01.T01 AT5G61060 54.386 114 48 1 16 125 117 230 2.81e-29 121
MsG0880046676.01.T01 AT5G61060 54.237 59 27 0 207 265 243 301 2.80e-15 78.6
MsG0880046676.01.T01 AT5G61060 54.386 114 48 1 16 125 117 230 2.89e-29 121
MsG0880046676.01.T01 AT5G61060 54.237 59 27 0 207 265 243 301 2.81e-15 78.6
MsG0880046676.01.T01 AT5G61070 50.877 114 52 1 16 125 150 263 2.38e-27 115
MsG0880046676.01.T01 AT5G61070 54.237 59 27 0 207 265 276 334 2.29e-17 85.1
MsG0880046676.01.T01 AT4G33470 38.255 149 82 5 15 156 155 300 2.76e-21 95.9
MsG0880046676.01.T01 AT1G08460 36.620 142 86 3 11 148 99 240 4.85e-16 79.3
MsG0880046676.01.T01 AT1G08460 36.620 142 86 3 11 148 99 240 1.85e-15 78.2

Find 96 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCATCGGCAGTTATTTC+TGG 0.083665 8:-76631434 MsG0880046676.01.T01:CDS
CACATGTTGAATGCCCTTTC+TGG 0.160331 8:-76628049 MsG0880046676.01.T01:CDS
GACTTATTTCCATGTGCTTT+TGG 0.207132 8:-76629457 MsG0880046676.01.T01:CDS
GTTTCTGACTGGGGTTCTAT+TGG 0.233046 8:-76627659 MsG0880046676.01.T01:CDS
GCATTGGCGGCCCAGGCTGC+AGG 0.240046 8:-76631218 MsG0880046676.01.T01:CDS
ATCAAATCCTGCTGATATTA+TGG 0.261921 8:+76628399 None:intergenic
CTTCTGCCGTTCATTATCTA+TGG 0.269611 8:-76627850 MsG0880046676.01.T01:CDS
CAACTCAGCCAAGCGCATTT+TGG 0.271262 8:-76629980 MsG0880046676.01.T01:intron
TTAATTTGTTAGCATGCTAT+TGG 0.280085 8:-76628136 MsG0880046676.01.T01:intron
CCTTCCTAGCCCCTGCAGCC+TGG 0.280478 8:+76631207 None:intergenic
TCTATTGGAACAGGTATTAC+TGG 0.322073 8:-76627644 MsG0880046676.01.T01:CDS
GATACAATTTAAGAGTTTCA+TGG 0.322927 8:-76629823 MsG0880046676.01.T01:CDS
AATAGTTTCCCTACCAAATC+TGG 0.341902 8:-76627595 MsG0880046676.01.T01:CDS
CGGCCCAGGCTGCAGGGGCT+AGG 0.342497 8:-76631211 MsG0880046676.01.T01:CDS
TAATTTGTTAGCATGCTATT+GGG 0.362937 8:-76628135 MsG0880046676.01.T01:intron
CTTCCTAGCCCCTGCAGCCT+GGG 0.369957 8:+76631208 None:intergenic
AACAGTTTGGAGGCCAGATT+TGG 0.372142 8:+76627582 None:intergenic
CAGCATGTTGTACTTCCTAT+AGG 0.374163 8:-76629200 MsG0880046676.01.T01:intron
CATTGGCGGCCCAGGCTGCA+GGG 0.382102 8:-76631217 MsG0880046676.01.T01:CDS
TTGCATCGGCAGTTATTTCT+GGG 0.382630 8:-76631433 MsG0880046676.01.T01:CDS
TGCTGCAGTGGCAGCATTGG+CGG 0.393653 8:-76631231 MsG0880046676.01.T01:CDS
CGAGGACTTCGAAAACAGTT+TGG 0.395135 8:+76627569 None:intergenic
CAAAATGCGCTTGGCTGAGT+TGG 0.402484 8:+76629981 None:intergenic
GACTGGGGTTCTATTGGAAC+AGG 0.408947 8:-76627653 MsG0880046676.01.T01:CDS
TGTGCTGCTAGGTTGGCAGC+TGG 0.415728 8:-76631470 MsG0880046676.01.T01:CDS
AAAATGCTTGTTATTCTTGA+GGG 0.421420 8:-76628021 MsG0880046676.01.T01:CDS
GCTGATATTATGGTAAAATC+TGG 0.422974 8:+76628409 None:intergenic
TGAGAGTCCTGTACCTGAAC+TGG 0.426221 8:-76627620 MsG0880046676.01.T01:CDS
CCAGGCTGCAGGGGCTAGGA+AGG 0.432471 8:-76631207 MsG0880046676.01.T01:CDS
AGTGGCAGCATTGGCGGCCC+AGG 0.435884 8:-76631225 MsG0880046676.01.T01:CDS
CAGGATGTTCATCACGGAAA+TGG 0.445304 8:-76631052 MsG0880046676.01.T01:CDS
CTTTGGGAAATGCAATGTCT+TGG 0.447271 8:-76627490 MsG0880046676.01.T01:CDS
TTTGGGAAATGCAATGTCTT+GGG 0.449185 8:-76627489 MsG0880046676.01.T01:CDS
ACATGTTGAATGCCCTTTCT+GGG 0.458352 8:-76628048 MsG0880046676.01.T01:CDS
TCTGCAACTGCAGTAATTGA+AGG 0.458691 8:-76627879 MsG0880046676.01.T01:CDS
TCAAACTTATGTCCTGATGA+TGG 0.463586 8:-76629490 MsG0880046676.01.T01:CDS
TGAAAGGGGCACACCCAAGC+AGG 0.467876 8:+76627820 None:intergenic
GTGCTGCTAGGTTGGCAGCT+GGG 0.470291 8:-76631469 MsG0880046676.01.T01:CDS
CTATGGTGATATCCCTGCTT+GGG 0.471985 8:-76627833 MsG0880046676.01.T01:intron
TAATGCTGCAGTGGCAGCAT+TGG 0.477717 8:-76631234 MsG0880046676.01.T01:CDS
ATTGGCGGCCCAGGCTGCAG+GGG 0.479227 8:-76631216 MsG0880046676.01.T01:CDS
AATTTAAGAGTTTCATGGAC+AGG 0.483008 8:-76629818 MsG0880046676.01.T01:CDS
AAAATGCGCTTGGCTGAGTT+GGG 0.483906 8:+76629982 None:intergenic
CTCGTGAGCACCTCCAGTAC+CGG 0.488935 8:+76630047 None:intergenic
TTCAGCATGTGCTGCTAGGT+TGG 0.489674 8:-76631477 MsG0880046676.01.T01:CDS
TCAATAACTAAACCATCATC+AGG 0.492702 8:+76629478 None:intergenic
TAAAATCAGGTTAGACCTCC+TGG 0.499376 8:-76631302 MsG0880046676.01.T01:intron
TCTATGGTGATATCCCTGCT+TGG 0.501846 8:-76627834 MsG0880046676.01.T01:CDS
AGCACATGCTGAATGCTCAT+TGG 0.509083 8:+76631487 None:intergenic
TTCTTACATCGCAACCTCCA+AGG 0.511040 8:+76628359 None:intergenic
ATGACATTGATTACTCCCTC+TGG 0.513474 8:-76628088 MsG0880046676.01.T01:CDS
CTATTGGAACAGGTATTACT+GGG 0.522551 8:-76627643 MsG0880046676.01.T01:CDS
AATAACTGCCGATGCAAGAT+CGG 0.527658 8:+76631439 None:intergenic
TTTACACCGGCATGATGACC+AGG 0.528140 8:+76631284 None:intergenic
TCTTACATCGCAACCTCCAA+GGG 0.531390 8:+76628360 None:intergenic
CTATCAGACCAAAATGCGCT+TGG 0.531711 8:+76629972 None:intergenic
ATTACAAGAAGGCCAACAAA+AGG 0.532461 8:+76628318 None:intergenic
GCTAGAGGTGATCCCCTTGG+AGG 0.534965 8:-76628373 MsG0880046676.01.T01:CDS
GCTGCTAGAGGTGATCCCCT+TGG 0.536365 8:-76628376 MsG0880046676.01.T01:CDS
TTAAAGATAGGTTTCAAGGA+AGG 0.543946 8:+76627526 None:intergenic
TTTGGAGGCCAGATTTGGTA+GGG 0.545315 8:+76627587 None:intergenic
AGACCTCCTGGTCATCATGC+CGG 0.553312 8:-76631290 MsG0880046676.01.T01:CDS
GGACTTCGAAAACAGTTTGG+AGG 0.554541 8:+76627572 None:intergenic
GTTTGGAGGCCAGATTTGGT+AGG 0.560072 8:+76627586 None:intergenic
CCCATTTGACCAAAAGCACA+TGG 0.560382 8:+76629448 None:intergenic
GTTACTGTGTGAATATTCCA+TGG 0.566581 8:-76629265 MsG0880046676.01.T01:CDS
CCTTCACAATAATGCTGCAG+TGG 0.574540 8:-76631243 MsG0880046676.01.T01:CDS
CCAACACCACCTCGACTCCA+TGG 0.574845 8:+76629248 None:intergenic
CCACTGCAGCATTATTGTGA+AGG 0.576647 8:+76631243 None:intergenic
TGCCGGTGTAAAAGATGTGA+TGG 0.577642 8:-76631273 MsG0880046676.01.T01:CDS
TGCTTGTTATTCTTGAGGGG+GGG 0.581434 8:-76628017 MsG0880046676.01.T01:intron
CCATGGAGTCGAGGTGGTGT+TGG 0.588677 8:-76629248 MsG0880046676.01.T01:CDS
ATGCTTGTTATTCTTGAGGG+GGG 0.588693 8:-76628018 MsG0880046676.01.T01:CDS
AATGCTTGTTATTCTTGAGG+GGG 0.598743 8:-76628019 MsG0880046676.01.T01:CDS
GCCGGTGTAAAAGATGTGAT+GGG 0.602652 8:-76631272 MsG0880046676.01.T01:CDS
GTTATGTGCCGATCTTGCAT+CGG 0.611910 8:-76631447 MsG0880046676.01.T01:CDS
TCGTGAGCACCTCCAGTACC+GGG 0.612589 8:+76630048 None:intergenic
CGGTACTGGAGGTGCTCACG+AGG 0.622536 8:-76630046 MsG0880046676.01.T01:CDS
AAATGCTTGTTATTCTTGAG+GGG 0.625092 8:-76628020 MsG0880046676.01.T01:CDS
TATATCATTGCATAGACATG+AGG 0.626961 8:-76630085 MsG0880046676.01.T01:CDS
GCAGGATTTGATGCTGCTAG+AGG 0.629426 8:-76628388 MsG0880046676.01.T01:CDS
TCATTGCATAGACATGAGGA+TGG 0.631549 8:-76630081 MsG0880046676.01.T01:CDS
GTCATCTGTGCATAGCCAGA+GGG 0.635405 8:+76628073 None:intergenic
GAAAGGGGCACACCCAAGCA+GGG 0.646279 8:+76627821 None:intergenic
ATATCACCATAGATAATGAA+CGG 0.649348 8:+76627844 None:intergenic
ATGCTCATTGGCGTATGTGT+CGG 0.660374 8:+76631499 None:intergenic
AGCATTCAGCATGTGCTGCT+AGG 0.661436 8:-76631481 MsG0880046676.01.T01:CDS
GTGAATATTCCATGGAGTCG+AGG 0.673165 8:-76629257 MsG0880046676.01.T01:CDS
TGATTGCAGGATGTTCATCA+CGG 0.678594 8:-76631058 MsG0880046676.01.T01:intron
TGTTGAATGCCCTTTCTGGG+TGG 0.681824 8:-76628045 MsG0880046676.01.T01:CDS
TCATCACGGAAATGGCACAC+AGG 0.691950 8:-76631044 MsG0880046676.01.T01:CDS
TGTCATCTGTGCATAGCCAG+AGG 0.715415 8:+76628072 None:intergenic
ACACCGGCATGATGACCAGG+AGG 0.734651 8:+76631287 None:intergenic
CCGGTGTAAAAGATGTGATG+GGG 0.737323 8:-76631271 MsG0880046676.01.T01:CDS
CTTACATCGCAACCTCCAAG+GGG 0.737439 8:+76628361 None:intergenic
AATATTCCATGGAGTCGAGG+TGG 0.740997 8:-76629254 MsG0880046676.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATAATCTTAACTTT+GGG - Chr8:76630061-76630080 MsG0880046676.01.T01:CDS 10.0%
!! TATAAAAATAATCTTAACTT+TGG - Chr8:76630060-76630079 MsG0880046676.01.T01:CDS 10.0%
!!! TTTAAAATTTGTTTGAATAA+TGG - Chr8:76628669-76628688 MsG0880046676.01.T01:intron 10.0%
!! AAATAAACAATAAACACAAT+CGG + Chr8:76629843-76629862 None:intergenic 15.0%
!! AATGAAAAATAAGTTTAGTA+TGG - Chr8:76630406-76630425 MsG0880046676.01.T01:intron 15.0%
!! ATGAAAAATAAGTTTAGTAT+GGG - Chr8:76630407-76630426 MsG0880046676.01.T01:intron 15.0%
!! ATTAGAATTTGAACAATTTA+AGG - Chr8:76627648-76627667 MsG0880046676.01.T01:CDS 15.0%
!! CAATAAAAAATACAATAAAC+TGG + Chr8:76628388-76628407 None:intergenic 15.0%
!! TAAAAATAATCTTAACTTTG+GGG - Chr8:76630062-76630081 MsG0880046676.01.T01:CDS 15.0%
!! TCATTAAAAAAAAATCAAAC+AGG + Chr8:76630783-76630802 None:intergenic 15.0%
!! TTAATAAAATGATTACAAGA+AGG + Chr8:76630697-76630716 None:intergenic 15.0%
!!! ATTATTGATCAACATATTTT+AGG + Chr8:76629875-76629894 None:intergenic 15.0%
!!! ATTTTTCATTCATGTAATTT+TGG + Chr8:76630396-76630415 None:intergenic 15.0%
!!! CAGTTTATTGTATTTTTTAT+TGG - Chr8:76628386-76628405 MsG0880046676.01.T01:CDS 15.0%
!!! GATAGTAGAAATATTTTTAT+GGG - Chr8:76629047-76629066 MsG0880046676.01.T01:intron 15.0%
!!! TGATAGTAGAAATATTTTTA+TGG - Chr8:76629046-76629065 MsG0880046676.01.T01:intron 15.0%
!!! TTATTGATCAACATATTTTA+GGG + Chr8:76629874-76629893 None:intergenic 15.0%
!!! TTGGTTGTATTTTTAAAAAT+AGG - Chr8:76630507-76630526 MsG0880046676.01.T01:intron 15.0%
!!! TTTTTAAAAATACAACCAAA+AGG + Chr8:76630506-76630525 None:intergenic 15.0%
!!! TTTTTAGTAAAAAAACAAGT+AGG - Chr8:76628701-76628720 MsG0880046676.01.T01:intron 15.0%
!!! TTTTTTAAAGAAACTAAAAC+AGG - Chr8:76629074-76629093 MsG0880046676.01.T01:intron 15.0%
!! AAAAATAATCTTAACTTTGG+GGG - Chr8:76630063-76630082 MsG0880046676.01.T01:CDS 20.0%
!! AATAAAAAAAAACACCAATG+TGG + Chr8:76628800-76628819 None:intergenic 20.0%
!! AATTGTTCAAATTCTAATGA+CGG + Chr8:76627646-76627665 None:intergenic 20.0%
!! ATATACTAAACAGTTAAGAA+AGG + Chr8:76631024-76631043 None:intergenic 20.0%
!! ATCATAGCTCATAATAAAAA+TGG + Chr8:76628872-76628891 None:intergenic 20.0%
!! CAAGAAAAGAAAAATAAACA+AGG - Chr8:76628477-76628496 MsG0880046676.01.T01:intron 20.0%
!! GAAAAGAAAAAAATGAACTT+AGG + Chr8:76629690-76629709 None:intergenic 20.0%
!! GATAAAACAATAAATGAAAG+GGG + Chr8:76631198-76631217 None:intergenic 20.0%
!! GGATAAAACAATAAATGAAA+GGG + Chr8:76631199-76631218 None:intergenic 20.0%
!! GGTCATATTAATACAATTAA+AGG + Chr8:76628047-76628066 None:intergenic 20.0%
!! TACAATTAAAGGTAAAAGTA+AGG + Chr8:76628036-76628055 None:intergenic 20.0%
!! TACTTTATTGAGATCATAAA+AGG + Chr8:76630236-76630255 None:intergenic 20.0%
!! TAGTAATCACTTGAAATTAA+AGG - Chr8:76628169-76628188 MsG0880046676.01.T01:intron 20.0%
!! TATGATATTATCTATTCTGT+AGG - Chr8:76628886-76628905 MsG0880046676.01.T01:intron 20.0%
!! TATTAAATAAAATCATTGGC+AGG - Chr8:76630711-76630730 MsG0880046676.01.T01:intron 20.0%
!!! AAACAAATTTTAAACAGAAG+GGG + Chr8:76628663-76628682 None:intergenic 20.0%
!!! AAGTTCATTTTTTTCTTTTC+AGG - Chr8:76629690-76629709 MsG0880046676.01.T01:intron 20.0%
!!! ACTCTTTAAGATAAAAAACA+TGG + Chr8:76630456-76630475 None:intergenic 20.0%
!!! ATTTTTAAAGATAGGTTTCA+AGG + Chr8:76631482-76631501 None:intergenic 20.0%
!!! CAAACAAATTTTAAACAGAA+GGG + Chr8:76628664-76628683 None:intergenic 20.0%
!!! TAATATGACCTTTTATTCAA+GGG - Chr8:76628057-76628076 MsG0880046676.01.T01:CDS 20.0%
!!! TCAAACAAATTTTAAACAGA+AGG + Chr8:76628665-76628684 None:intergenic 20.0%
!!! TTAATATGACCTTTTATTCA+AGG - Chr8:76628056-76628075 MsG0880046676.01.T01:CDS 20.0%
!!! TTTTTGTTGTCGATAATTTT+TGG - Chr8:76631320-76631339 MsG0880046676.01.T01:intron 20.0%
! AAAAAATCAAACAGGAGATT+AGG + Chr8:76630775-76630794 None:intergenic 25.0%
! AAAAATTATTCTGAATGTCG+AGG + Chr8:76631453-76631472 None:intergenic 25.0%
! AAAATAAGTTTAGTATGGGT+TGG - Chr8:76630411-76630430 MsG0880046676.01.T01:intron 25.0%
! AAAATAATCTTAACTTTGGG+GGG - Chr8:76630064-76630083 MsG0880046676.01.T01:CDS 25.0%
! AAATGTGAATATCTAAGAAG+AGG - Chr8:76630031-76630050 MsG0880046676.01.T01:CDS 25.0%
! AACTCTTAAATTGTATCTAC+AGG + Chr8:76629175-76629194 None:intergenic 25.0%
! AAGAAAAAAATGAACTTAGG+AGG + Chr8:76629687-76629706 None:intergenic 25.0%
! AATAGACTATCATGAAACAA+AGG + Chr8:76630480-76630499 None:intergenic 25.0%
! AATCATTTACTCTTCCTAAA+AGG + Chr8:76629910-76629929 None:intergenic 25.0%
! ACATGAAAAATCTAAATGAC+TGG + Chr8:76631246-76631265 None:intergenic 25.0%
! ATATCACCATAGATAATGAA+CGG + Chr8:76631160-76631179 None:intergenic 25.0%
! ATGTGGAAAACATTGAATAA+AGG + Chr8:76628783-76628802 None:intergenic 25.0%
! CCTAAAACAGAACTATAATT+CGG - Chr8:76628237-76628256 MsG0880046676.01.T01:intron 25.0%
! CCTATAGGTTAGTATTTATT+GGG - Chr8:76629816-76629835 MsG0880046676.01.T01:CDS 25.0%
! CTATAGGTTAGTATTTATTG+GGG - Chr8:76629817-76629836 MsG0880046676.01.T01:CDS 25.0%
! CTTTGAATCTTCTATGTTAA+TGG - Chr8:76628309-76628328 MsG0880046676.01.T01:intron 25.0%
! GATACAATTTAAGAGTTTCA+TGG - Chr8:76629178-76629197 MsG0880046676.01.T01:intron 25.0%
! GGGATAAAACAATAAATGAA+AGG + Chr8:76631200-76631219 None:intergenic 25.0%
! TAACCTTAATTCAACAACAA+CGG - Chr8:76628509-76628528 MsG0880046676.01.T01:intron 25.0%
! TAGAGATAAAAATTTCATCG+AGG - Chr8:76629097-76629116 MsG0880046676.01.T01:intron 25.0%
! TCCTATAGGTTAGTATTTAT+TGG - Chr8:76629815-76629834 MsG0880046676.01.T01:CDS 25.0%
! TGATAAATTCCTTAGCAAAT+AGG + Chr8:76630282-76630301 None:intergenic 25.0%
! TGTGGAAAACATTGAATAAA+GGG + Chr8:76628782-76628801 None:intergenic 25.0%
! TTCTCAGAATTTAAACATGA+TGG + Chr8:76629657-76629676 None:intergenic 25.0%
!! AATATGACCTTTTATTCAAG+GGG - Chr8:76628058-76628077 MsG0880046676.01.T01:CDS 25.0%
!! ATTTTACTAGCTATGAAAAC+AGG - Chr8:76628430-76628449 MsG0880046676.01.T01:intron 25.0%
!! TCGACATTCAGAATAATTTT+TGG - Chr8:76631452-76631471 MsG0880046676.01.T01:CDS 25.0%
!! TTAAAAATGTGATGTCACTT+TGG - Chr8:76631494-76631513 MsG0880046676.01.T01:CDS 25.0%
!! TTATTCAATGTTTTCCACAT+TGG - Chr8:76628783-76628802 MsG0880046676.01.T01:intron 25.0%
!! TTTTACTAGCTATGAAAACA+GGG - Chr8:76628431-76628450 MsG0880046676.01.T01:intron 25.0%
!!! AAAAATGCTTGTTATTCTTG+AGG - Chr8:76630979-76630998 MsG0880046676.01.T01:intron 25.0%
!!! AAAATGCTTGTTATTCTTGA+GGG - Chr8:76630980-76630999 MsG0880046676.01.T01:intron 25.0%
!!! ATAATTTTTGGTTTCTGACT+GGG - Chr8:76631332-76631351 MsG0880046676.01.T01:intron 25.0%
!!! ATTTATTGTTTTATCCCTTC+TGG - Chr8:76631203-76631222 MsG0880046676.01.T01:CDS 25.0%
!!! GACATCACATTTTTAAAGAT+AGG + Chr8:76631490-76631509 None:intergenic 25.0%
!!! TAAAAATGTGATGTCACTTT+GGG - Chr8:76631495-76631514 MsG0880046676.01.T01:CDS 25.0%
!!! TAATTTGTTAGCATGCTATT+GGG - Chr8:76630866-76630885 MsG0880046676.01.T01:intron 25.0%
!!! TATTTTAGTCAAAACCAAGT+GGG + Chr8:76628137-76628156 None:intergenic 25.0%
!!! TCATTTTTTTCTTTTCAGGT+TGG - Chr8:76629694-76629713 MsG0880046676.01.T01:intron 25.0%
!!! TCTTCTGCTTAGTTTTATTA+AGG - Chr8:76630807-76630826 MsG0880046676.01.T01:intron 25.0%
!!! TTAATTTGTTAGCATGCTAT+TGG - Chr8:76630865-76630884 MsG0880046676.01.T01:intron 25.0%
!!! TTGTTTTTCCTTAATTACCA+GGG - Chr8:76629959-76629978 MsG0880046676.01.T01:intron 25.0%
!!! TTTGTTTTTCCTTAATTACC+AGG - Chr8:76629958-76629977 MsG0880046676.01.T01:intron 25.0%
AATTTAAGAGTTTCATGGAC+AGG - Chr8:76629183-76629202 MsG0880046676.01.T01:intron 30.0%
AGATTAGGTTCTTTATATGG+TGG + Chr8:76630760-76630779 None:intergenic 30.0%
AGCTCATAATAAAAATGGTG+AGG + Chr8:76628867-76628886 None:intergenic 30.0%
AGGAGATTAGGTTCTTTATA+TGG + Chr8:76630763-76630782 None:intergenic 30.0%
AGTATGCATCTCAAAGAAAA+AGG + Chr8:76629264-76629283 None:intergenic 30.0%
ATCAAATCCTGCTGATATTA+TGG + Chr8:76630605-76630624 None:intergenic 30.0%
ATTCATTGTATTGGGTTTGA+AGG - Chr8:76629369-76629388 MsG0880046676.01.T01:intron 30.0%
ATTCTAATGACGGTTATGAA+CGG + Chr8:76627636-76627655 None:intergenic 30.0%
CAATACAATGAATGTGTTGA+GGG + Chr8:76629362-76629381 None:intergenic 30.0%
CCCAATAAATACTAACCTAT+AGG + Chr8:76629819-76629838 None:intergenic 30.0%
CTCAACACATTCATTGTATT+GGG - Chr8:76629361-76629380 MsG0880046676.01.T01:intron 30.0%
CTTGAAACATTGACATTGAA+TGG - Chr8:76630542-76630561 MsG0880046676.01.T01:intron 30.0%
GCTGATATTATGGTAAAATC+TGG + Chr8:76630595-76630614 None:intergenic 30.0%
GTGGAAAACATTGAATAAAG+GGG + Chr8:76628781-76628800 None:intergenic 30.0%
TATATCATTGCATAGACATG+AGG - Chr8:76628916-76628935 MsG0880046676.01.T01:intron 30.0%
TCAATAACTAAACCATCATC+AGG + Chr8:76629526-76629545 None:intergenic 30.0%
TGGAAAACATTGAATAAAGG+GGG + Chr8:76628780-76628799 None:intergenic 30.0%
TTAAAGATAGGTTTCAAGGA+AGG + Chr8:76631478-76631497 None:intergenic 30.0%
TTCATTGTATTGGGTTTGAA+GGG - Chr8:76629370-76629389 MsG0880046676.01.T01:intron 30.0%
! AAATTATGCGATTTTCCTGA+AGG - Chr8:76627860-76627879 MsG0880046676.01.T01:CDS 30.0%
! AGCAAAATCTAGAGCTTAAT+AGG + Chr8:76631047-76631066 None:intergenic 30.0%
! ATATGACCTTTTATTCAAGG+GGG - Chr8:76628059-76628078 MsG0880046676.01.T01:CDS 30.0%
! GATTTTACCATAATATCAGC+AGG - Chr8:76630595-76630614 MsG0880046676.01.T01:intron 30.0%
! TACCAAAGCAAATCCATTTT+TGG + Chr8:76627598-76627617 None:intergenic 30.0%
! TGATAGTCTATTCTACCTTT+TGG - Chr8:76630488-76630507 MsG0880046676.01.T01:intron 30.0%
! TGTTTTGCGTAAAAAACAAG+AGG - Chr8:76628337-76628356 MsG0880046676.01.T01:CDS 30.0%
!! AAATGCTTGTTATTCTTGAG+GGG - Chr8:76630981-76631000 MsG0880046676.01.T01:intron 30.0%
!! CCGAATTATAGTTCTGTTTT+AGG + Chr8:76628240-76628259 None:intergenic 30.0%
!! TATCTTGCTATTCTGCAATT+TGG - Chr8:76629593-76629612 MsG0880046676.01.T01:intron 30.0%
!!! AGTTCTGTTTTAGGAAGTTA+AGG + Chr8:76628231-76628250 None:intergenic 30.0%
!!! GAAGGTGCTAATTTTAGATT+GGG - Chr8:76627812-76627831 MsG0880046676.01.T01:intron 30.0%
!!! GATAATTTTTGGTTTCTGAC+TGG - Chr8:76631331-76631350 MsG0880046676.01.T01:intron 30.0%
!!! GTATTTTAGTCAAAACCAAG+TGG + Chr8:76628138-76628157 None:intergenic 30.0%
!!! TAATTTTTGGTTTCTGACTG+GGG - Chr8:76631333-76631352 MsG0880046676.01.T01:intron 30.0%
!!! TCTTTTCAGGTTGGTTATAT+GGG - Chr8:76629703-76629722 MsG0880046676.01.T01:intron 30.0%
!!! TTCTTTTCAGGTTGGTTATA+TGG - Chr8:76629702-76629721 MsG0880046676.01.T01:intron 30.0%
!!! TTGTTGTAGCTTTTTTGATC+TGG - Chr8:76630206-76630225 MsG0880046676.01.T01:intron 30.0%
AATAGTTTCCCTACCAAATC+TGG - Chr8:76631406-76631425 MsG0880046676.01.T01:intron 35.0%
ACAAAGTCAATTCTCAATCC+TGG + Chr8:76628268-76628287 None:intergenic 35.0%
ACTTACTCCTTAGTGACTTT+AGG + Chr8:76628102-76628121 None:intergenic 35.0%
AGATAGAACGTGTTATACCT+GGG - Chr8:76628533-76628552 MsG0880046676.01.T01:intron 35.0%
AGTGATTACTACAGTGAAAG+TGG + Chr8:76628160-76628179 None:intergenic 35.0%
ATGCAATGTCTTGGGAAAAA+AGG - Chr8:76631520-76631539 MsG0880046676.01.T01:CDS 35.0%
ATTACAAGAAGGCCAACAAA+AGG + Chr8:76630686-76630705 None:intergenic 35.0%
ATTCCTTAGCAAATAGGTTC+TGG + Chr8:76630276-76630295 None:intergenic 35.0%
ATTTCATCGAGGAATTAGCT+CGG - Chr8:76629108-76629127 MsG0880046676.01.T01:intron 35.0%
CAAAGTCAATTCTCAATCCT+GGG + Chr8:76628267-76628286 None:intergenic 35.0%
CCAATACAATGAATGTGTTG+AGG + Chr8:76629363-76629382 None:intergenic 35.0%
CCTCAACACATTCATTGTAT+TGG - Chr8:76629360-76629379 MsG0880046676.01.T01:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG + Chr8:76629466-76629485 None:intergenic 35.0%
CTATTGGAACAGGTATTACT+GGG - Chr8:76631358-76631377 MsG0880046676.01.T01:intron 35.0%
CTCTCAAAGTCAAACATCTT+TGG + Chr8:76630113-76630132 None:intergenic 35.0%
GAGGTAAAGTGATCATAGAA+AGG - Chr8:76630130-76630149 MsG0880046676.01.T01:intron 35.0%
GTTACTGTGTGAATATTCCA+TGG - Chr8:76629736-76629755 MsG0880046676.01.T01:intron 35.0%
TAGATAGAACGTGTTATACC+TGG - Chr8:76628532-76628551 MsG0880046676.01.T01:intron 35.0%
TATGTGTTCCCTGGTAATTA+AGG + Chr8:76629970-76629989 None:intergenic 35.0%
TCAAACTTATGTCCTGATGA+TGG - Chr8:76629511-76629530 MsG0880046676.01.T01:CDS 35.0%
TCATTGTATTGGGTTTGAAG+GGG - Chr8:76629371-76629390 MsG0880046676.01.T01:intron 35.0%
TCTATTGGAACAGGTATTAC+TGG - Chr8:76631357-76631376 MsG0880046676.01.T01:intron 35.0%
TGGAAATTTCTCCTTCATTG+CGG - Chr8:76629286-76629305 MsG0880046676.01.T01:CDS 35.0%
TTTACTCTTCCTAAAAGGCA+TGG + Chr8:76629905-76629924 None:intergenic 35.0%
TTTGGGAAATGCAATGTCTT+GGG - Chr8:76631512-76631531 MsG0880046676.01.T01:CDS 35.0%
! ACGTAGCATTTTATGAGCTA+TGG - Chr8:76628836-76628855 MsG0880046676.01.T01:intron 35.0%
! ATTTCAGAACCATGCCTTTT+AGG - Chr8:76629893-76629912 MsG0880046676.01.T01:intron 35.0%
! CAAAGATGTTTGACTTTGAG+AGG - Chr8:76630111-76630130 MsG0880046676.01.T01:intron 35.0%
! CTACCGTTGTTGTTGAATTA+AGG + Chr8:76628515-76628534 None:intergenic 35.0%
! GACTTATTTCCATGTGCTTT+TGG - Chr8:76629544-76629563 MsG0880046676.01.T01:intron 35.0%
! TATACCTGGGATAATGGTAA+TGG - Chr8:76628546-76628565 MsG0880046676.01.T01:intron 35.0%
! TGCCAAAAATGGATTTGCTT+TGG - Chr8:76627593-76627612 MsG0880046676.01.T01:CDS 35.0%
!! AAGTTTAGTATGGGTTGGTT+CGG - Chr8:76630416-76630435 MsG0880046676.01.T01:intron 35.0%
!! AATGCTTGTTATTCTTGAGG+GGG - Chr8:76630982-76631001 MsG0880046676.01.T01:intron 35.0%
!! TTCTTTGAGATGCATACTGT+TGG - Chr8:76629266-76629285 MsG0880046676.01.T01:CDS 35.0%
!!! CTTTTCAGGTTGGTTATATG+GGG - Chr8:76629704-76629723 MsG0880046676.01.T01:intron 35.0%
!!! GGAAGGTGCTAATTTTAGAT+TGG - Chr8:76627811-76627830 MsG0880046676.01.T01:intron 35.0%
!!! TTTTATCCCTTCTGGAATAC+TGG - Chr8:76631211-76631230 MsG0880046676.01.T01:CDS 35.0%
!!! TTTTCAGGTTGGTTATATGG+GGG - Chr8:76629705-76629724 MsG0880046676.01.T01:intron 35.0%
AACATCCTGCAATCAGATCA+GGG + Chr8:76627938-76627957 None:intergenic 40.0%
AACTATAATTCGGTACACCC+AGG - Chr8:76628247-76628266 MsG0880046676.01.T01:intron 40.0%
AAGATTGATTGATTGGCAGC+TGG - Chr8:76630362-76630381 MsG0880046676.01.T01:intron 40.0%
AATAACTGCCGATGCAAGAT+CGG + Chr8:76627565-76627584 None:intergenic 40.0%
AATTCCACCAGTATTCCAGA+AGG + Chr8:76631221-76631240 None:intergenic 40.0%
ACATGTTGAATGCCCTTTCT+GGG - Chr8:76630953-76630972 MsG0880046676.01.T01:intron 40.0%
ACCAAAATGCCACAATTAGG+CGG + Chr8:76629325-76629344 None:intergenic 40.0%
ACGTGTTATACCTGGGATAA+TGG - Chr8:76628540-76628559 MsG0880046676.01.T01:intron 40.0%
ACTCCTTAGTGACTTTAGGT+GGG + Chr8:76628098-76628117 None:intergenic 40.0%
ACTTACTCCTGAGTGTGTTT+AGG - Chr8:76628736-76628755 MsG0880046676.01.T01:intron 40.0%
ACTTCTATCTTGGGTGTAGA+AGG - Chr8:76629623-76629642 MsG0880046676.01.T01:intron 40.0%
AGATCAGTTGAGACTTGCAT+AGG - Chr8:76630174-76630193 MsG0880046676.01.T01:intron 40.0%
AGCAAAACAAATCAGTGAGC+TGG - Chr8:76627989-76628008 MsG0880046676.01.T01:intron 40.0%
AGCGAATTCAGAAGCTGAAA+AGG + Chr8:76630572-76630591 None:intergenic 40.0%
ATGCAAGTCTCAACTGATCT+TGG + Chr8:76630174-76630193 None:intergenic 40.0%
ATGTCTTGGGAAAAAAGGTG+AGG - Chr8:76631525-76631544 MsG0880046676.01.T01:CDS 40.0%
ATTCCACCAGTATTCCAGAA+GGG + Chr8:76631220-76631239 None:intergenic 40.0%
CAGCATGTTGTACTTCCTAT+AGG - Chr8:76629801-76629820 MsG0880046676.01.T01:CDS 40.0%
CTTCTATCTTGGGTGTAGAA+GGG - Chr8:76629624-76629643 MsG0880046676.01.T01:intron 40.0%
CTTCTGCCGTTCATTATCTA+TGG - Chr8:76631151-76631170 MsG0880046676.01.T01:intron 40.0%
GACAACATCAACTTACAAGC+CGG - Chr8:76629444-76629463 MsG0880046676.01.T01:intron 40.0%
GATCAGTTGAGACTTGCATA+GGG - Chr8:76630175-76630194 MsG0880046676.01.T01:intron 40.0%
GCAACCAAAATGCCACAATT+AGG + Chr8:76629328-76629347 None:intergenic 40.0%
GCCAATCAATCAATCTTCCT+GGG + Chr8:76630359-76630378 None:intergenic 40.0%
GCTTGTTCCTCACTAAAATC+AGG - Chr8:76627686-76627705 MsG0880046676.01.T01:CDS 40.0%
GGTTGCTGTACTTCTATCTT+GGG - Chr8:76629614-76629633 MsG0880046676.01.T01:intron 40.0%
TAAAATCAGGTTAGACCTCC+TGG - Chr8:76627699-76627718 MsG0880046676.01.T01:intron 40.0%
TACTCCTTAGTGACTTTAGG+TGG + Chr8:76628099-76628118 None:intergenic 40.0%
TAGCTATGAAAACAGGGAAG+AGG - Chr8:76628437-76628456 MsG0880046676.01.T01:intron 40.0%
TATCAGCCCCCTTGAATAAA+AGG + Chr8:76628068-76628087 None:intergenic 40.0%
TCATTGCATAGACATGAGGA+TGG - Chr8:76628920-76628939 MsG0880046676.01.T01:intron 40.0%
TCCCAGGAAGATTGATTGAT+TGG - Chr8:76630355-76630374 MsG0880046676.01.T01:intron 40.0%
TCGGGTTATGCTGACAAAAA+GGG - Chr8:76629127-76629146 MsG0880046676.01.T01:intron 40.0%
TCTACCATTACCATTATCCC+AGG + Chr8:76628553-76628572 None:intergenic 40.0%
TCTGCAACTGCAGTAATTGA+AGG - Chr8:76631122-76631141 MsG0880046676.01.T01:intron 40.0%
TGATTGCAGGATGTTCATCA+CGG - Chr8:76627943-76627962 MsG0880046676.01.T01:intron 40.0%
TGCCAATCAATCAATCTTCC+TGG + Chr8:76630360-76630379 None:intergenic 40.0%
TGGTTGCTGTACTTCTATCT+TGG - Chr8:76629613-76629632 MsG0880046676.01.T01:intron 40.0%
TTATGCTGACAAAAAGGGCT+GGG - Chr8:76629132-76629151 MsG0880046676.01.T01:intron 40.0%
TTTAGTCCCACTTAGAGACA+TGG - Chr8:76629398-76629417 MsG0880046676.01.T01:intron 40.0%
TTTCATCGAGGAATTAGCTC+GGG - Chr8:76629109-76629128 MsG0880046676.01.T01:intron 40.0%
! AAGCATTTTTCCACCCAGAA+AGG + Chr8:76630969-76630988 None:intergenic 40.0%
! AGCATTTTTCCACCCAGAAA+GGG + Chr8:76630968-76630987 None:intergenic 40.0%
! ATGACATTGATTACTCCCTC+TGG - Chr8:76630913-76630932 MsG0880046676.01.T01:intron 40.0%
! CCATGTGCTTTTGGTCAAAT+GGG - Chr8:76629553-76629572 MsG0880046676.01.T01:intron 40.0%
! CTATTTTCCAGTTCAGGTAC+AGG + Chr8:76631391-76631410 None:intergenic 40.0%
! CTCGATCTTCATCCTTTTGT+TGG - Chr8:76630671-76630690 MsG0880046676.01.T01:intron 40.0%
! CTTTGGGAAATGCAATGTCT+TGG - Chr8:76631511-76631530 MsG0880046676.01.T01:CDS 40.0%
! GAGGATGGAACATTTTATCC+CGG - Chr8:76628935-76628954 MsG0880046676.01.T01:intron 40.0%
! GATCTGTTTTATGTGTTCCC+TGG + Chr8:76629979-76629998 None:intergenic 40.0%
! GGGAAACTATTTTCCAGTTC+AGG + Chr8:76631397-76631416 None:intergenic 40.0%
! GTACCAGAACCTATTTGCTA+AGG - Chr8:76630270-76630289 MsG0880046676.01.T01:intron 40.0%
! TCCATGTGCTTTTGGTCAAA+TGG - Chr8:76629552-76629571 MsG0880046676.01.T01:intron 40.0%
!! ACTTACAAGCCGGTTTTGTA+AGG - Chr8:76629454-76629473 MsG0880046676.01.T01:CDS 40.0%
!! ATGCTTGTTATTCTTGAGGG+GGG - Chr8:76630983-76631002 MsG0880046676.01.T01:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - Chr8:76629464-76629483 MsG0880046676.01.T01:CDS 40.0%
!! GGGATAATGGTAATGGTAGA+TGG - Chr8:76628553-76628572 MsG0880046676.01.T01:intron 40.0%
!! GGTCTAACCTGATTTTAGTG+AGG + Chr8:76627696-76627715 None:intergenic 40.0%
!! TATGGGTTGGTTCGGAATAT+TGG - Chr8:76630424-76630443 MsG0880046676.01.T01:intron 40.0%
!! TTGCATCGGCAGTTATTTCT+GGG - Chr8:76627568-76627587 MsG0880046676.01.T01:CDS 40.0%
AAAATGCCACAATTAGGCGG+CGG + Chr8:76629322-76629341 None:intergenic 45.0%
AAAATGCGCTTGGCTGAGTT+GGG + Chr8:76629022-76629041 None:intergenic 45.0%
AACAGTTTGGAGGCCAGATT+TGG + Chr8:76631422-76631441 None:intergenic 45.0%
AATATTCCATGGAGTCGAGG+TGG - Chr8:76629747-76629766 MsG0880046676.01.T01:intron 45.0%
ACACAGCCATGTCTCTAAGT+GGG + Chr8:76629407-76629426 None:intergenic 45.0%
ACACCCACCTAAAGTCACTA+AGG - Chr8:76628092-76628111 MsG0880046676.01.T01:CDS 45.0%
ACTCCTGAGTGTGTTTAGGA+TGG - Chr8:76628740-76628759 MsG0880046676.01.T01:intron 45.0%
AGCACATGCTGAATGCTCAT+TGG + Chr8:76627517-76627536 None:intergenic 45.0%
AGTCAAAACCAAGTGGGTGT+GGG + Chr8:76628131-76628150 None:intergenic 45.0%
ATATGCCTGATGTACTTCCC+AGG - Chr8:76630339-76630358 MsG0880046676.01.T01:intron 45.0%
ATGCTCATTGGCGTATGTGT+CGG + Chr8:76627505-76627524 None:intergenic 45.0%
CAACCATCCTAAACACACTC+AGG + Chr8:76628746-76628765 None:intergenic 45.0%
CACATGTTGAATGCCCTTTC+TGG - Chr8:76630952-76630971 MsG0880046676.01.T01:intron 45.0%
CAGGATGTTCATCACGGAAA+TGG - Chr8:76627949-76627968 MsG0880046676.01.T01:intron 45.0%
CCACTGCAGCATTATTGTGA+AGG + Chr8:76627761-76627780 None:intergenic 45.0%
CCGGTGTAAAAGATGTGATG+GGG - Chr8:76627730-76627749 MsG0880046676.01.T01:intron 45.0%
CCTTCACAATAATGCTGCAG+TGG - Chr8:76627758-76627777 MsG0880046676.01.T01:intron 45.0%
CGAGGACTTCGAAAACAGTT+TGG + Chr8:76631435-76631454 None:intergenic 45.0%
CTATCAGACCAAAATGCGCT+TGG + Chr8:76629032-76629051 None:intergenic 45.0%
CTATGGTGATATCCCTGCTT+GGG - Chr8:76631168-76631187 MsG0880046676.01.T01:intron 45.0%
CTCGGGTTATGCTGACAAAA+AGG - Chr8:76629126-76629145 MsG0880046676.01.T01:intron 45.0%
GAACATCCTGCAATCAGATC+AGG + Chr8:76627939-76627958 None:intergenic 45.0%
GCCGGTGTAAAAGATGTGAT+GGG - Chr8:76627729-76627748 MsG0880046676.01.T01:intron 45.0%
GGACTTCGAAAACAGTTTGG+AGG + Chr8:76631432-76631451 None:intergenic 45.0%
GTGAATATTCCATGGAGTCG+AGG - Chr8:76629744-76629763 MsG0880046676.01.T01:intron 45.0%
GTTATGCTGACAAAAAGGGC+TGG - Chr8:76629131-76629150 MsG0880046676.01.T01:intron 45.0%
GTTTCTGACTGGGGTTCTAT+TGG - Chr8:76631342-76631361 MsG0880046676.01.T01:intron 45.0%
TACACAGCCATGTCTCTAAG+TGG + Chr8:76629408-76629427 None:intergenic 45.0%
TAGTCAAAACCAAGTGGGTG+TGG + Chr8:76628132-76628151 None:intergenic 45.0%
TCTATGGTGATATCCCTGCT+TGG - Chr8:76631167-76631186 MsG0880046676.01.T01:intron 45.0%
TCTTACATCGCAACCTCCAA+GGG + Chr8:76630644-76630663 None:intergenic 45.0%
TCTTAGTCAACACTGCCTTC+AGG + Chr8:76627878-76627897 None:intergenic 45.0%
TGCCGGTGTAAAAGATGTGA+TGG - Chr8:76627728-76627747 MsG0880046676.01.T01:intron 45.0%
TTCTTACATCGCAACCTCCA+AGG + Chr8:76630645-76630664 None:intergenic 45.0%
TTGTATTGGGTTTGAAGGGG+TGG - Chr8:76629374-76629393 MsG0880046676.01.T01:intron 45.0%
! AACAGGGAAGAGGCTTTTAG+TGG - Chr8:76628447-76628466 MsG0880046676.01.T01:intron 45.0%
! ATCTTCCTGGGAAGTACATC+AGG + Chr8:76630347-76630366 None:intergenic 45.0%
! ATTTCTGGGCGTGCCAAAAA+TGG - Chr8:76627582-76627601 MsG0880046676.01.T01:CDS 45.0%
! CCCATTTGACCAAAAGCACA+TGG + Chr8:76629556-76629575 None:intergenic 45.0%
! CCCCATCACATCTTTTACAC+CGG + Chr8:76627733-76627752 None:intergenic 45.0%
! CTTGCATCGGCAGTTATTTC+TGG - Chr8:76627567-76627586 MsG0880046676.01.T01:CDS 45.0%
! GGAACATTTTATCCCGGTAC+TGG - Chr8:76628941-76628960 MsG0880046676.01.T01:intron 45.0%
! GTTATGTGCCGATCTTGCAT+CGG - Chr8:76627554-76627573 MsG0880046676.01.T01:CDS 45.0%
! TTTGGAGGCCAGATTTGGTA+GGG + Chr8:76631417-76631436 None:intergenic 45.0%
!! ACATTTTATCCCGGTACTGG+AGG - Chr8:76628944-76628963 MsG0880046676.01.T01:intron 45.0%
!! TATCCCTTCTGGAATACTGG+TGG - Chr8:76631214-76631233 MsG0880046676.01.T01:CDS 45.0%
!! TGCTTGTTATTCTTGAGGGG+GGG - Chr8:76630984-76631003 MsG0880046676.01.T01:intron 45.0%
!!! ATTTTATTAAATAAAATCAT+TGG - Chr8:76630707-76630726 MsG0880046676.01.T01:intron 5.0%
CAAAATGCGCTTGGCTGAGT+TGG + Chr8:76629023-76629042 None:intergenic 50.0%
CTTACATCGCAACCTCCAAG+GGG + Chr8:76630643-76630662 None:intergenic 50.0%
GACTGGGGTTCTATTGGAAC+AGG - Chr8:76631348-76631367 MsG0880046676.01.T01:intron 50.0%
GCAGGATTTGATGCTGCTAG+AGG - Chr8:76630613-76630632 MsG0880046676.01.T01:intron 50.0%
GTACTCCCTGATCTGATTGC+AGG - Chr8:76627930-76627949 MsG0880046676.01.T01:CDS 50.0%
GTCATCTGTGCATAGCCAGA+GGG + Chr8:76630931-76630950 None:intergenic 50.0%
TAATGCTGCAGTGGCAGCAT+TGG - Chr8:76627767-76627786 MsG0880046676.01.T01:intron 50.0%
TCATCACGGAAATGGCACAC+AGG - Chr8:76627957-76627976 MsG0880046676.01.T01:intron 50.0%
TGAGAGTCCTGTACCTGAAC+TGG - Chr8:76631381-76631400 MsG0880046676.01.T01:intron 50.0%
TGTCATCTGTGCATAGCCAG+AGG + Chr8:76630932-76630951 None:intergenic 50.0%
TGTGTTGAGGGCTGCAATGA+AGG + Chr8:76629350-76629369 None:intergenic 50.0%
TGTTGAATGCCCTTTCTGGG+TGG - Chr8:76630956-76630975 MsG0880046676.01.T01:intron 50.0%
TTTACACCGGCATGATGACC+AGG + Chr8:76627720-76627739 None:intergenic 50.0%
! AGCATTCAGCATGTGCTGCT+AGG - Chr8:76627520-76627539 MsG0880046676.01.T01:CDS 50.0%
! ATTCTTGAGGGGGGGTTTTG+TGG - Chr8:76630992-76631011 MsG0880046676.01.T01:intron 50.0%
! CAACTCAGCCAAGCGCATTT+TGG - Chr8:76629021-76629040 MsG0880046676.01.T01:intron 50.0%
! GCCGCCTAATTGTGGCATTT+TGG - Chr8:76629321-76629340 MsG0880046676.01.T01:intron 50.0%
! GTTTGGAGGCCAGATTTGGT+AGG + Chr8:76631418-76631437 None:intergenic 50.0%
! TGGTTATATGGGGGTGCAGA+AGG - Chr8:76629714-76629733 MsG0880046676.01.T01:intron 50.0%
! TTCAGCATGTGCTGCTAGGT+TGG - Chr8:76627524-76627543 MsG0880046676.01.T01:CDS 50.0%
AGACCTCCTGGTCATCATGC+CGG - Chr8:76627711-76627730 MsG0880046676.01.T01:intron 55.0%
GTTAGCAACCCACACCCACT+TGG - Chr8:76628120-76628139 MsG0880046676.01.T01:CDS 55.0%
ACACCGGCATGATGACCAGG+AGG + Chr8:76627717-76627736 None:intergenic 60.0%
CACAATTAGGCGGCGGCTAG+GGG + Chr8:76629315-76629334 None:intergenic 60.0%
CCAACACCACCTCGACTCCA+TGG + Chr8:76629756-76629775 None:intergenic 60.0%
CCACAATTAGGCGGCGGCTA+GGG + Chr8:76629316-76629335 None:intergenic 60.0%
CCATGGAGTCGAGGTGGTGT+TGG - Chr8:76629753-76629772 MsG0880046676.01.T01:intron 60.0%
CTCGTGAGCACCTCCAGTAC+CGG + Chr8:76628957-76628976 None:intergenic 60.0%
GCTAGAGGTGATCCCCTTGG+AGG - Chr8:76630628-76630647 MsG0880046676.01.T01:intron 60.0%
GCTGCTAGAGGTGATCCCCT+TGG - Chr8:76630625-76630644 MsG0880046676.01.T01:intron 60.0%
TCGTGAGCACCTCCAGTACC+GGG + Chr8:76628956-76628975 None:intergenic 60.0%
! GAAAGGGGCACACCCAAGCA+GGG + Chr8:76631183-76631202 None:intergenic 60.0%
! GTGCTGCTAGGTTGGCAGCT+GGG - Chr8:76627532-76627551 MsG0880046676.01.T01:CDS 60.0%
! TGAAAGGGGCACACCCAAGC+AGG + Chr8:76631184-76631203 None:intergenic 60.0%
! TGCTGCAGTGGCAGCATTGG+CGG - Chr8:76627770-76627789 MsG0880046676.01.T01:intron 60.0%
! TGTGCTGCTAGGTTGGCAGC+TGG - Chr8:76627531-76627550 MsG0880046676.01.T01:CDS 60.0%
CCCTAGCCGCCGCCTAATTG+TGG - Chr8:76629313-76629332 MsG0880046676.01.T01:intron 65.0%
CTTCCTAGCCCCTGCAGCCT+GGG + Chr8:76627796-76627815 None:intergenic 65.0%
GCCACAATTAGGCGGCGGCT+AGG + Chr8:76629317-76629336 None:intergenic 65.0%
GCTAGGGGCGACCGCAATGA+AGG + Chr8:76629300-76629319 None:intergenic 65.0%
!! CGGTACTGGAGGTGCTCACG+AGG - Chr8:76628955-76628974 MsG0880046676.01.T01:intron 65.0%
ATTGGCGGCCCAGGCTGCAG+GGG - Chr8:76627785-76627804 MsG0880046676.01.T01:intron 70.0%
CATTGGCGGCCCAGGCTGCA+GGG - Chr8:76627784-76627803 MsG0880046676.01.T01:intron 70.0%
CCAGGCTGCAGGGGCTAGGA+AGG - Chr8:76627794-76627813 MsG0880046676.01.T01:intron 70.0%
CCTTCCTAGCCCCTGCAGCC+TGG + Chr8:76627797-76627816 None:intergenic 70.0%
!! AGTGGCAGCATTGGCGGCCC+AGG - Chr8:76627776-76627795 MsG0880046676.01.T01:intron 70.0%
! GCATTGGCGGCCCAGGCTGC+AGG - Chr8:76627783-76627802 MsG0880046676.01.T01:intron 75.0%
! CGGCCCAGGCTGCAGGGGCT+AGG - Chr8:76627790-76627809 MsG0880046676.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 76627465 76631558 76627465 ID=MsG0880046676.01;Name=MsG0880046676.01
Chr8 mRNA 76627465 76631558 76627465 ID=MsG0880046676.01.T01;Parent=MsG0880046676.01;Name=MsG0880046676.01.T01;_AED=0.45;_eAED=0.61;_QI=0|0.4|0.27|1|0.3|0.36|11|0|443
Chr8 exon 76631409 76631558 76631409 ID=MsG0880046676.01.T01:exon:8581;Parent=MsG0880046676.01.T01
Chr8 exon 76631190 76631315 76631190 ID=MsG0880046676.01.T01:exon:8580;Parent=MsG0880046676.01.T01
Chr8 exon 76631021 76631071 76631021 ID=MsG0880046676.01.T01:exon:8579;Parent=MsG0880046676.01.T01
Chr8 exon 76629981 76630115 76629981 ID=MsG0880046676.01.T01:exon:8578;Parent=MsG0880046676.01.T01
Chr8 exon 76629789 76629844 76629789 ID=MsG0880046676.01.T01:exon:8577;Parent=MsG0880046676.01.T01
Chr8 exon 76629449 76629537 76629449 ID=MsG0880046676.01.T01:exon:8576;Parent=MsG0880046676.01.T01
Chr8 exon 76629201 76629311 76629201 ID=MsG0880046676.01.T01:exon:8575;Parent=MsG0880046676.01.T01
Chr8 exon 76628323 76628445 76628323 ID=MsG0880046676.01.T01:exon:8574;Parent=MsG0880046676.01.T01
Chr8 exon 76628018 76628146 76628018 ID=MsG0880046676.01.T01:exon:8573;Parent=MsG0880046676.01.T01
Chr8 exon 76627834 76627951 76627834 ID=MsG0880046676.01.T01:exon:8572;Parent=MsG0880046676.01.T01
Chr8 exon 76627465 76627708 76627465 ID=MsG0880046676.01.T01:exon:8571;Parent=MsG0880046676.01.T01
Chr8 CDS 76631409 76631558 76631409 ID=MsG0880046676.01.T01:cds;Parent=MsG0880046676.01.T01
Chr8 CDS 76631190 76631315 76631190 ID=MsG0880046676.01.T01:cds;Parent=MsG0880046676.01.T01
Chr8 CDS 76631021 76631071 76631021 ID=MsG0880046676.01.T01:cds;Parent=MsG0880046676.01.T01
Chr8 CDS 76629981 76630115 76629981 ID=MsG0880046676.01.T01:cds;Parent=MsG0880046676.01.T01
Chr8 CDS 76629789 76629844 76629789 ID=MsG0880046676.01.T01:cds;Parent=MsG0880046676.01.T01
Chr8 CDS 76629449 76629537 76629449 ID=MsG0880046676.01.T01:cds;Parent=MsG0880046676.01.T01
Chr8 CDS 76629201 76629311 76629201 ID=MsG0880046676.01.T01:cds;Parent=MsG0880046676.01.T01
Chr8 CDS 76628323 76628445 76628323 ID=MsG0880046676.01.T01:cds;Parent=MsG0880046676.01.T01
Chr8 CDS 76628018 76628146 76628018 ID=MsG0880046676.01.T01:cds;Parent=MsG0880046676.01.T01
Chr8 CDS 76627834 76627951 76627834 ID=MsG0880046676.01.T01:cds;Parent=MsG0880046676.01.T01
Chr8 CDS 76627465 76627708 76627465 ID=MsG0880046676.01.T01:cds;Parent=MsG0880046676.01.T01
Gene Sequence

>MsG0880046676.01.T01

ATGATCAATGATCTTTATGATTTCAGTTATTTTACTTCCGACACATACGCCAATGAGCATTCAGCATGTGCTGCTAGGTTGGCAGCTGGGTTATGTGCCGATCTTGCATCGGCAGTTATTTCTGGGCGTGCCAAAAATGGATTTGCTTTGGTTAGACCTCCTGGTCATCATGCCGGTGTAAAAGATGTGATGGGGTTTTGCCTTCACAATAATGCTGCAGTGGCAGCATTGGCGGCCCAGGCTGCAGGGGCTAGGAAGGTGCTAATTTTAGATTGGGATGTTCATCACGGAAATGGCACACAGGAAATATTTGAGCAAAACAAATCAGTCTTGTATATATCATTGCATAGACATGAGGATGGAACATTTTATCCCGGTACTGGAGGTGCTCACGAGGTATTTGATTGCAGACAAATTTTCAAATTATTGCTGCTGCTGCCCAACTCAGCCAAGCGCATTTTGATACAATTTAAGAGTTTCATGGACAGGAGTTTGTCAAATAGAGTTCAGTATTACGTGCTCAATATAAAATCTGTTCAAGATTCAAACTTATGTCCTGATGATGGTTTAGTTATTGACTTATTTCCATGTGCTTTTGGTCAAATGGGTTGGTTATATGGGGGTGCAGAAGGTTACTGTGTGAATATTCCATGGAGTCGAGGTGGTGTTGGTGATAATGATTACATTTTTGCATTTCAGCATGTTGTACTTCCTATAGCTTCTGAATTCGCTCCAGATTTTACCATAATATCAGCAGGATTTGATGCTGCTAGAGGTGATCCCCTTGGAGGTTGCGATGTAAGAATTTTAACTCGATCTTCATCCTTTTGTTGGCCTTCTTCATGCTATTGGGCTTACATTGAGTTTTTCATCTATTATGACATTGATTACTCCCTCTGGCTATGCACAGATGACACACATGTTGAATGCCCTTTCTGGGTGGAAAAATGCTTGTTATTCTTGAGGGGGGTTGATCTAAATACATTTTATTGCAGCTATAATCTTCGCTCTATATCATCTTCTGCAACTGCAGTAATTGAAGGTGAATTCTTCTGCCGTTCATTATCTATGGTGATATCCCTGCTTGGAGCTATTTTTGTTGTCGATAATTTTTGGTTTCTGACTGGGGTTCTATTGGAACAGGTATTACTGGGTGAGAGTCCTGTACCTGAACTGGAAAATAGTTTCCCTACCAAATCTGGCCTCCAAACTGTTTTCGAAGTCCTCGACATTCAGAATAATTTTTGGCCTTCCTTGAAACCTATCTTTAAAAATGTGATGTCACTTTGGGAAATGCAATGTCTTGGGAAAAAAGGTGAGGAACTGTCTTGA
Protein sequence

>MsG0880046676.01.T01

MINDLYDFSYFTSDTYANEHSACAARLAAGLCADLASAVISGRAKNGFALVRPPGHHAGVKDVMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGTFYPGTGGAHEVFDCRQIFKLLLLLPNSAKRILIQFKSFMDRSLSNRVQYYVLNIKSVQDSNLCPDDGLVIDLFPCAFGQMGWLYGGAEGYCVNIPWSRGGVGDNDYIFAFQHVVLPIASEFAPDFTIISAGFDAARGDPLGGCDVRILTRSSSFCWPSSCYWAYIEFFIYYDIDYSLWLCTDDTHVECPFWVEKCLLFLRGVDLNTFYCSYNLRSISSSATAVIEGEFFCRSLSMVISLLGAIFVVDNFWFLTGVLLEQVLLGESPVPELENSFPTKSGLQTVFEVLDIQNNFWPSLKPIFKNVMSLWEMQCLGKKGEELS*