AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007494.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007494.01.T01 MTR_2g026310 97.096 551 15 1 1 551 1 550 0.0 1110
MsG0280007494.01.T01 MTR_2g026380 68.539 534 110 4 19 551 18 494 0.0 728
MsG0280007494.01.T01 MTR_7g063290 70.522 536 88 6 19 551 18 486 0.0 700
MsG0280007494.01.T01 MTR_3g082790 52.518 556 226 8 18 549 20 561 0.0 544
MsG0280007494.01.T01 MTR_3g082790 52.642 530 215 6 42 549 6 521 0.0 530
MsG0280007494.01.T01 MTR_3g081360 51.789 531 231 7 19 549 5 510 0.0 525
MsG0280007494.01.T01 MTR_3g081420 72.115 208 57 1 344 551 2 208 6.52e-100 301
MsG0280007494.01.T01 MTR_3g081380 60.494 162 62 1 19 178 16 177 8.60e-67 215
MsG0280007494.01.T01 MTR_7g062030 82.500 80 14 0 17 96 30 109 2.31e-36 132
MsG0280007494.01.T01 MTR_3g081390 65.556 90 31 0 90 179 36 125 2.26e-32 121
MsG0280007494.01.T01 MTR_3g081410 61.607 112 38 2 377 483 1 112 8.96e-31 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007494.01.T01 AT4G16420 58.919 555 151 10 1 551 1 482 0.0 631
MsG0280007494.01.T01 AT4G16420 58.676 559 150 11 1 551 1 486 0.0 628
MsG0280007494.01.T01 AT4G16420 58.676 559 149 11 1 551 1 485 0.0 627
MsG0280007494.01.T01 AT3G07740 46.181 576 257 11 1 552 1 547 2.85e-159 466
MsG0280007494.01.T01 AT3G07740 47.222 540 234 9 35 552 16 526 5.61e-157 459
MsG0280007494.01.T01 AT3G07740 45.626 583 257 12 1 552 1 554 1.20e-156 459
MsG0280007494.01.T01 AT3G07740 47.024 504 217 8 70 552 2 476 1.93e-142 420

Find 156 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCATTTCTTGAGGAATT+TGG 0.167298 2:-16219221 None:intergenic
TCTCCAATGGACAGAGATTT+TGG 0.183129 2:+16219188 MsG0280007494.01.T01:CDS
TATATTGTAGGGTCAGATTC+TGG 0.192149 2:+16218948 MsG0280007494.01.T01:intron
ACTCGCCGAAATGGAGTTTA+AGG 0.210601 2:+16219325 MsG0280007494.01.T01:CDS
TTGTATCATGCTTTGGTAAT+AGG 0.249930 2:+16220488 MsG0280007494.01.T01:three_prime_UTR
AAATGTATGGCATGGGAAAC+TGG 0.255134 2:+16218037 MsG0280007494.01.T01:CDS
TTGACTTCTAATATGAATTC+AGG 0.263830 2:+16218847 MsG0280007494.01.T01:CDS
AACGTTTGTGCTGCGATTTA+AGG 0.269280 2:+16220194 MsG0280007494.01.T01:CDS
AAATCCTTCTCAAATGGATT+TGG 0.279560 2:-16219591 None:intergenic
TCAATACATAAGTCAAAATC+TGG 0.298397 2:-16217262 None:intergenic
GCATGAACATGTCATATTTC+CGG 0.301157 2:-16219638 None:intergenic
TCAGCATCATTATCATATTC+AGG 0.301408 2:-16219296 None:intergenic
GAAAAGAATTCAAGAGCTTA+AGG 0.302238 2:+16219725 MsG0280007494.01.T01:CDS
AACCAAAAGGCATCCAATAA+AGG 0.306706 2:+16219005 MsG0280007494.01.T01:CDS
TGCTGCGCATTTATTCAAAA+AGG 0.307711 2:+16219387 MsG0280007494.01.T01:CDS
AAGAAATGAAGGCCCTTCTT+TGG 0.309899 2:+16219232 MsG0280007494.01.T01:CDS
GCCCTTTATTGGATGCCTTT+TGG 0.311044 2:-16219007 None:intergenic
ACAAAAGCAATCATTCTTAC+AGG 0.313342 2:+16217317 MsG0280007494.01.T01:CDS
TTTGGGTTGCTGAGTGTAAC+TGG 0.327176 2:-16215718 None:intergenic
TGGTCCTGGAATTGTTAAAA+TGG 0.329731 2:+16219040 MsG0280007494.01.T01:CDS
TTTGGAACCCCGTGATTGTT+CGG 0.334438 2:-16219967 None:intergenic
CTCCCCGTTCTTCCCTCTTC+CGG 0.336302 2:+16218134 MsG0280007494.01.T01:CDS
TTTGTGAAACTAGTTGAGTT+TGG 0.337742 2:-16215736 None:intergenic
TCCCTCTCATTTGCCCAGAC+TGG 0.349166 2:+16217842 MsG0280007494.01.T01:CDS
TCTGGAGACATTAATGCATT+TGG 0.356050 2:-16219985 None:intergenic
TCATCATCTGCATTCCAGTC+TGG 0.356882 2:-16217856 None:intergenic
TTGGAACCCCGTGATTGTTC+GGG 0.365263 2:-16219966 None:intergenic
ATGCTCATTAAGAAGGGAAT+TGG 0.386721 2:+16220352 MsG0280007494.01.T01:CDS
CAGCCTTACTTGACTCTAGA+TGG 0.387712 2:-16218717 None:intergenic
ATGGATGCAACTGGATACTA+TGG 0.389391 2:+16220051 MsG0280007494.01.T01:CDS
CTCTTGCATCTTCAGATAAA+CGG 0.389633 2:-16220227 None:intergenic
TAAAATCACGATTCAAGAAA+AGG 0.390955 2:-16215897 None:intergenic
TTAAGTGTTGTATCATGCTT+TGG 0.395396 2:+16220481 MsG0280007494.01.T01:three_prime_UTR
GTCAAGTTCTGTCAATGAAA+TGG 0.399893 2:+16220032 MsG0280007494.01.T01:CDS
ACAAAGAAACGAGGATGTTT+CGG 0.403693 2:-16215765 None:intergenic
GGTGTTAAATCCTTCTCAAA+TGG 0.404781 2:-16219597 None:intergenic
AGTGGAGATAATTCAGAATC+TGG 0.407331 2:+16216195 MsG0280007494.01.T01:CDS
TTGTGAAACTAGTTGAGTTT+GGG 0.415835 2:-16215735 None:intergenic
TACTGTAATAAAGATATTAC+AGG 0.419202 2:+16217211 MsG0280007494.01.T01:CDS
TAGGACATGTCTCATGTTGT+TGG 0.423324 2:+16218244 MsG0280007494.01.T01:intron
ATACCGGAAGAGGGAAGAAC+GGG 0.423481 2:-16218137 None:intergenic
ATGGAAGATTCCAACAAATC+TGG 0.423508 2:+16218811 MsG0280007494.01.T01:CDS
TTATTATGTGGTCCTAAAAC+AGG 0.424155 2:-16220405 None:intergenic
AATTCAGAATCTGGAGTTGC+AGG 0.426709 2:+16216204 MsG0280007494.01.T01:CDS
GCCAGTGGAACCAGATTTGT+TGG 0.430345 2:-16218821 None:intergenic
AACAAACTCAAATTCATTGA+GGG 0.439595 2:+16215926 MsG0280007494.01.T01:five_prime_UTR
AGAACTTGACCCTGCAGGTC+TGG 0.440690 2:-16220019 None:intergenic
ATATTGTAGGGTCAGATTCT+GGG 0.444203 2:+16218949 MsG0280007494.01.T01:intron
CTTGACTCTAGATGGAGAAA+AGG 0.444237 2:-16218709 None:intergenic
AAGCATGCATAGAACACTAT+AGG 0.446368 2:+16218097 MsG0280007494.01.T01:CDS
GTCAATGAAATGGATGCAAC+TGG 0.450262 2:+16220042 MsG0280007494.01.T01:CDS
CAACAAACTCAAATTCATTG+AGG 0.450908 2:+16215925 MsG0280007494.01.T01:five_prime_UTR
CATCATCTGCATTCCAGTCT+GGG 0.453025 2:-16217855 None:intergenic
GGTCTGGTACCAGCAGAGTC+TGG 0.454618 2:-16220003 None:intergenic
GTTCATGCGCTTTCATACTA+AGG 0.455273 2:+16219653 MsG0280007494.01.T01:CDS
GGTTTCACTCAGAAATTCAA+TGG 0.455769 2:+16215947 MsG0280007494.01.T01:exon
CATGGGAGATCTTAGCATAA+AGG 0.456713 2:+16218677 MsG0280007494.01.T01:CDS
CTATCTGTACAAATGATTGC+TGG 0.459385 2:+16220253 MsG0280007494.01.T01:CDS
AGTGTCCTTAAACTCCATTT+CGG 0.467485 2:-16219330 None:intergenic
ACCAAAAGGCATCCAATAAA+GGG 0.468979 2:+16219006 MsG0280007494.01.T01:CDS
TCTTGCCATGGCGAAAGGGC+AGG 0.472164 2:+16218285 MsG0280007494.01.T01:CDS
ATGTGGTCCCGAACAATCAC+GGG 0.473554 2:+16219959 MsG0280007494.01.T01:CDS
CCTCCAAAATCTCTGTCCAT+TGG 0.475110 2:-16219191 None:intergenic
AAAATCACGATTCAAGAAAA+GGG 0.482625 2:-16215896 None:intergenic
CAGCAATCATTTGTACAGAT+AGG 0.483057 2:-16220252 None:intergenic
TGGATACCATCAAAATTGAC+AGG 0.484436 2:+16220320 MsG0280007494.01.T01:CDS
TGTGAGTCAGGTCAAGGAGC+AGG 0.487841 2:+16217157 MsG0280007494.01.T01:intron
AGGACATGTCTCATGTTGTT+GGG 0.493324 2:+16218245 MsG0280007494.01.T01:intron
TGCAGCTAGTGCTAACCAAA+AGG 0.494192 2:+16218992 MsG0280007494.01.T01:CDS
AAGGAGCAGGTGAAGCGAAA+AGG 0.494331 2:+16217170 MsG0280007494.01.T01:CDS
TCGCAGGAAGCTCGTGCTGC+TGG 0.496946 2:+16219844 MsG0280007494.01.T01:intron
AACTTCTTGCCATGGCGAAA+GGG 0.496960 2:+16218281 MsG0280007494.01.T01:CDS
GTATGATATGCTCATTAAGA+AGG 0.500449 2:+16220345 MsG0280007494.01.T01:CDS
AGTTGAAGCAGATAGATATC+TGG 0.502448 2:+16219879 MsG0280007494.01.T01:CDS
TGGTTATAACGCGAAAAGAC+AGG 0.504452 2:+16219265 MsG0280007494.01.T01:CDS
GGCACATGGCACACTTGATA+CGG 0.505024 2:-16217240 None:intergenic
CCACTGATTTCAACCAAAGA+AGG 0.505240 2:-16219245 None:intergenic
TGAGCAATTACTCGCCGAAA+TGG 0.506718 2:+16219316 MsG0280007494.01.T01:CDS
CCAAATTCCTCAAGAAATGA+AGG 0.508733 2:+16219221 MsG0280007494.01.T01:CDS
AAAGCCTGACATACCGGAAG+AGG 0.510365 2:-16218147 None:intergenic
AGGAGCAGGTGAAGCGAAAA+GGG 0.511931 2:+16217171 MsG0280007494.01.T01:CDS
TTGACTCTAGATGGAGAAAA+GGG 0.511968 2:-16218708 None:intergenic
TCCAACAAATCTGGTTCCAC+TGG 0.512061 2:+16218820 MsG0280007494.01.T01:CDS
AAAGGCATCCAATAAAGGGC+GGG 0.512200 2:+16219010 MsG0280007494.01.T01:CDS
GAACTTCTTGCCATGGCGAA+AGG 0.516288 2:+16218280 MsG0280007494.01.T01:CDS
ATCTTCAGATAAACGGTTGG+AGG 0.520579 2:-16220220 None:intergenic
GGGAATAGAAATGTATGGCA+TGG 0.523916 2:+16218029 MsG0280007494.01.T01:intron
AGTCCTATGTTCAGAGATAA+CGG 0.524266 2:-16219700 None:intergenic
CTCACCCTGCCCTTTCGCCA+TGG 0.527521 2:-16218290 None:intergenic
TTGACAGAACTTGACCCTGC+AGG 0.529299 2:-16220024 None:intergenic
TAGGTAAAGTCAGATATAGT+AGG 0.534129 2:+16220507 MsG0280007494.01.T01:three_prime_UTR
CTTTATGCTAAGATCTCCCA+TGG 0.535543 2:-16218676 None:intergenic
CTTGCCATGGCGAAAGGGCA+GGG 0.537534 2:+16218286 MsG0280007494.01.T01:CDS
AGAAGGGCCTTCATTTCTTG+AGG 0.537872 2:-16219228 None:intergenic
TCTGCTGGTACCAGACCTGC+AGG 0.542235 2:+16220009 MsG0280007494.01.T01:CDS
AATTCATATTAGAAGTCAAA+CGG 0.543584 2:-16218843 None:intergenic
GGAATAGAAATGTATGGCAT+GGG 0.547477 2:+16218030 MsG0280007494.01.T01:CDS
TGCATCTTCAGATAAACGGT+TGG 0.547701 2:-16220223 None:intergenic
CCTTCTTTGGTTGAAATCAG+TGG 0.553653 2:+16219245 MsG0280007494.01.T01:CDS
GTTTCACTCAGAAATTCAAT+GGG 0.557415 2:+16215948 MsG0280007494.01.T01:exon
AATGTGCAACAAATCTTCCA+AGG 0.559628 2:-16220667 None:intergenic
TTAATGTCTCCAGACTCTGC+TGG 0.560448 2:+16219994 MsG0280007494.01.T01:CDS
AATGTATGGCATGGGAAACT+GGG 0.562064 2:+16218038 MsG0280007494.01.T01:CDS
TTATCCAAATCCATTTGAGA+AGG 0.565094 2:+16219587 MsG0280007494.01.T01:CDS
CATGTGGTCCCGAACAATCA+CGG 0.569260 2:+16219958 MsG0280007494.01.T01:CDS
TCATCAAATGTTCAAGAATG+TGG 0.572296 2:+16220300 MsG0280007494.01.T01:CDS
AATAGATTAAGAGAGGTCTC+AGG 0.575021 2:-16220380 None:intergenic
GCAGCATGTGTGTTGACTGA+GGG 0.575476 2:-16218972 None:intergenic
CAATCATTCTTACAGGGTCA+TGG 0.577318 2:+16217324 MsG0280007494.01.T01:CDS
CATGGCGAAAGGGCAGGGTG+AGG 0.578638 2:+16218291 MsG0280007494.01.T01:CDS
TCCAGTCTGGGCAAATGAGA+GGG 0.584062 2:-16217843 None:intergenic
AAGGCATCCAATAAAGGGCG+GGG 0.585408 2:+16219011 MsG0280007494.01.T01:CDS
GTCATTGACAGATTCTCCAA+TGG 0.586027 2:+16219175 MsG0280007494.01.T01:intron
AGAAAGAAGAATGCTGCAAG+TGG 0.586362 2:+16216177 MsG0280007494.01.T01:CDS
CATACCGGAAGAGGGAAGAA+CGG 0.589060 2:-16218138 None:intergenic
TTCCAGTCTGGGCAAATGAG+AGG 0.590859 2:-16217844 None:intergenic
AACAAATCTTCCAAGGGTGA+TGG 0.592339 2:-16220660 None:intergenic
TATGATATGCTCATTAAGAA+GGG 0.593230 2:+16220346 MsG0280007494.01.T01:CDS
AGGCATCCAATAAAGGGCGG+GGG 0.596003 2:+16219012 MsG0280007494.01.T01:CDS
CCGAGGAAAAGTCAATATGC+CGG 0.597275 2:+16219619 MsG0280007494.01.T01:CDS
GATTGTAACAGGACTTCCCA+TGG 0.597457 2:+16218659 MsG0280007494.01.T01:intron
CACTGATTTCAACCAAAGAA+GGG 0.597471 2:-16219244 None:intergenic
CAGAAAAGAACTTCTTGCCA+TGG 0.598444 2:+16218273 MsG0280007494.01.T01:CDS
CAATACATAAGTCAAAATCT+GGG 0.604695 2:-16217261 None:intergenic
GGGCAGGGTGAGGACAAGAA+AGG 0.604928 2:+16218301 MsG0280007494.01.T01:CDS
TCTGGCGCATAAGAGAAGAA+AGG 0.605068 2:+16219897 MsG0280007494.01.T01:CDS
GCAGAAGTTGCTGAGCATGT+TGG 0.605076 2:+16218060 MsG0280007494.01.T01:CDS
GAACCGTTATCTCTGAACAT+AGG 0.607443 2:+16219697 MsG0280007494.01.T01:CDS
TGCAGCATGTGTGTTGACTG+AGG 0.608763 2:-16218973 None:intergenic
CCTGGAATTGTTAAAATGGA+AGG 0.609692 2:+16219044 MsG0280007494.01.T01:CDS
AATTCAATGGGTCGTTCTCG+TGG 0.613358 2:+16215960 MsG0280007494.01.T01:exon
ATTAGAAGTCAAACGGCCAG+TGG 0.615296 2:-16218836 None:intergenic
AGCGAGAGAAAGTGCTCATG+TGG 0.619340 2:+16219942 MsG0280007494.01.T01:CDS
TAAGTCAAAATCTGGGCACA+TGG 0.621677 2:-16217254 None:intergenic
ACAGGATAATAGATTAAGAG+AGG 0.621723 2:-16220387 None:intergenic
AAGCCTGACATACCGGAAGA+GGG 0.625173 2:-16218146 None:intergenic
CAAAAGCAATCATTCTTACA+GGG 0.631809 2:+16217318 MsG0280007494.01.T01:CDS
TGAGAAGGATTTAACACCCG+AGG 0.635433 2:+16219602 MsG0280007494.01.T01:CDS
CGTTTATCTGAAGATGCAAG+AGG 0.641805 2:+16220228 MsG0280007494.01.T01:CDS
AAAAGGCATCCAATAAAGGG+CGG 0.652819 2:+16219009 MsG0280007494.01.T01:CDS
GTTTAAGGACACTGACACTG+AGG 0.653964 2:+16219340 MsG0280007494.01.T01:CDS
AATCACTTCTATCCACTCCA+CGG 0.655372 2:-16220577 None:intergenic
ATGTGCAACAAATCTTCCAA+GGG 0.660232 2:-16220666 None:intergenic
ATTGTAACAGGACTTCCCAT+GGG 0.663000 2:+16218660 MsG0280007494.01.T01:intron
TAAGGACACTGACACTGAGG+AGG 0.663510 2:+16219343 MsG0280007494.01.T01:CDS
TGATGAAAGAAAGCGCAGGA+AGG 0.670308 2:+16219539 MsG0280007494.01.T01:CDS
ACGATGATGATCCAAGCCAA+AGG 0.670643 2:+16215997 MsG0280007494.01.T01:CDS
TTTATGCTAAGATCTCCCAT+GGG 0.680782 2:-16218675 None:intergenic
GGCTTGATGAAAGAAAGCGC+AGG 0.689974 2:+16219535 MsG0280007494.01.T01:intron
CTGCTGGTACCAGACCTGCA+GGG 0.707483 2:+16220010 MsG0280007494.01.T01:CDS
GGATACCATCAAAATTGACA+GGG 0.710009 2:+16220321 MsG0280007494.01.T01:CDS
CACTTCTATCCACTCCACGG+TGG 0.710717 2:-16220574 None:intergenic
TATCTGCTTCAACTGAACTG+CGG 0.712712 2:-16219870 None:intergenic
TACCGGAAGAGGGAAGAACG+GGG 0.721077 2:-16218136 None:intergenic
AAAATTGCGACAAAGAAACG+AGG 0.747996 2:-16215774 None:intergenic
TGTGGTCCCGAACAATCACG+GGG 0.753110 2:+16219960 MsG0280007494.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATAAATAATATTTAAAGA+TGG - Chr2:16216462-16216481 None:intergenic 10.0%
!! TATATTGTTTATATATTGTA+GGG + Chr2:16218937-16218956 MsG0280007494.01.T01:intron 10.0%
!!! TTATTTTTATGATTATTATG+TGG - Chr2:16220420-16220439 None:intergenic 10.0%
!! ATTGAAAGGAAATTATAATT+GGG - Chr2:16218914-16218933 None:intergenic 15.0%
!! CTATATTGTTTATATATTGT+AGG + Chr2:16218936-16218955 MsG0280007494.01.T01:intron 15.0%
!! GAAAAATATAAACTTTAACT+TGG - Chr2:16216440-16216459 None:intergenic 15.0%
!! TATCATATTCGTTTATATAA+AGG + Chr2:16218192-16218211 MsG0280007494.01.T01:intron 15.0%
!! TATTATAATCTATGATTCTA+TGG + Chr2:16218539-16218558 MsG0280007494.01.T01:intron 15.0%
!!! ATATGATAAAGCATTATATT+TGG + Chr2:16217946-16217965 MsG0280007494.01.T01:intron 15.0%
!!! CTTTTCTTATTATTGTAATT+GGG + Chr2:16216036-16216055 MsG0280007494.01.T01:intron 15.0%
!!! GATATTAAGAATTTTGTATT+CGG - Chr2:16216928-16216947 None:intergenic 15.0%
!!! TCTATATCAGTTTTTTAATA+CGG + Chr2:16217792-16217811 MsG0280007494.01.T01:intron 15.0%
!!! TCTTTTCTTATTATTGTAAT+TGG + Chr2:16216035-16216054 MsG0280007494.01.T01:intron 15.0%
!! AATTCATATTAGAAGTCAAA+CGG - Chr2:16218846-16218865 None:intergenic 20.0%
!! ACATTCTTCTTTATAAATAC+TGG + Chr2:16218628-16218647 MsG0280007494.01.T01:intron 20.0%
!! ACTAAAGTTAAAGACTTATA+TGG - Chr2:16216588-16216607 None:intergenic 20.0%
!! AGAAACCTATAAAACTAAAA+TGG - Chr2:16219420-16219439 None:intergenic 20.0%
!! AGGCATTATTATTTATTGTT+TGG - Chr2:16218472-16218491 None:intergenic 20.0%
!! ATAACTGCTAAAATATGTTT+CGG + Chr2:16218506-16218525 MsG0280007494.01.T01:intron 20.0%
!! ATGAATAAAAATCAAACCTT+TGG - Chr2:16216016-16216035 None:intergenic 20.0%
!! CTCAAAATCATAAACAATAA+TGG + Chr2:16219458-16219477 MsG0280007494.01.T01:intron 20.0%
!! GATTGAAAGGAAATTATAAT+TGG - Chr2:16218915-16218934 None:intergenic 20.0%
!! TAAACAATATAGAGATTGAA+AGG - Chr2:16218928-16218947 None:intergenic 20.0%
!! TACTGTAATAAAGATATTAC+AGG + Chr2:16217211-16217230 MsG0280007494.01.T01:CDS 20.0%
!! TAGATGACAATGTAATTTAA+GGG - Chr2:16216905-16216924 None:intergenic 20.0%
!! TATCTATAAGAGAAACTATT+TGG + Chr2:16217638-16217657 MsG0280007494.01.T01:intron 20.0%
!! TATGTTTAATAAGACATCAA+AGG - Chr2:16217377-16217396 None:intergenic 20.0%
!! TGCAAAATTCAATTACATTA+TGG - Chr2:16216062-16216081 None:intergenic 20.0%
!!! AACAACCATTTTAGTTTTAT+AGG + Chr2:16219412-16219431 MsG0280007494.01.T01:intron 20.0%
!!! AATATAAACTTTAACTTGGA+TGG - Chr2:16216436-16216455 None:intergenic 20.0%
!!! ACGTTTTTCAATTTAAAGAT+AGG - Chr2:16219511-16219530 None:intergenic 20.0%
!!! ATGTTTGATAATAATTTTCC+TGG + Chr2:16217129-16217148 MsG0280007494.01.T01:intron 20.0%
!!! TTAATCTATTATCCTGTTTT+AGG + Chr2:16220393-16220412 MsG0280007494.01.T01:three_prime_UTR 20.0%
! AAAATCACGATTCAAGAAAA+GGG - Chr2:16215899-16215918 None:intergenic 25.0%
! AACAAACTCAAATTCATTGA+GGG + Chr2:16215926-16215945 MsG0280007494.01.T01:five_prime_UTR 25.0%
! AACTATTTGGAAAGATTTAG+AGG + Chr2:16217651-16217670 MsG0280007494.01.T01:intron 25.0%
! AATGTAATTTAAGGGATGTT+TGG - Chr2:16216897-16216916 None:intergenic 25.0%
! AGGAAAACATTTGAAAGTAA+TGG - Chr2:16217357-16217376 None:intergenic 25.0%
! ATACAATTAACCAAGTACAA+TGG - Chr2:16216251-16216270 None:intergenic 25.0%
! ATAGCATACTGTTATAAATC+AGG + Chr2:16218393-16218412 MsG0280007494.01.T01:intron 25.0%
! CAATACATAAGTCAAAATCT+GGG - Chr2:16217264-16217283 None:intergenic 25.0%
! CATCAACTTATTCAGTTATA+CGG - Chr2:16216954-16216973 None:intergenic 25.0%
! GAATGTCGATAAGAATTTAA+TGG - Chr2:16219766-16219785 None:intergenic 25.0%
! GTAGATGACAATGTAATTTA+AGG - Chr2:16216906-16216925 None:intergenic 25.0%
! GTTCTATCATAAACCATATT+TGG - Chr2:16217691-16217710 None:intergenic 25.0%
! TAAAATCACGATTCAAGAAA+AGG - Chr2:16215900-16215919 None:intergenic 25.0%
! TATGATATGCTCATTAAGAA+GGG + Chr2:16220346-16220365 MsG0280007494.01.T01:CDS 25.0%
! TCAATACATAAGTCAAAATC+TGG - Chr2:16217265-16217284 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG + Chr2:16217695-16217714 MsG0280007494.01.T01:intron 25.0%
! TTCCAAGTAGAGAAAAAAAA+AGG - Chr2:16219788-16219807 None:intergenic 25.0%
! TTGACTTCTAATATGAATTC+AGG + Chr2:16218847-16218866 MsG0280007494.01.T01:CDS 25.0%
! TTGGTTTAAATTAATTGCCT+AGG + Chr2:16217899-16217918 MsG0280007494.01.T01:intron 25.0%
! TTTAAATTGAAAAACGTTGC+AGG + Chr2:16219514-16219533 MsG0280007494.01.T01:intron 25.0%
! TTTCATTCTTTAGCGAAAAA+TGG - Chr2:16217031-16217050 None:intergenic 25.0%
!! TAATGCAATTTTCATAACAG+CGG - Chr2:16217574-16217593 None:intergenic 25.0%
!!! AGCAACAAATTTTTGGTTTT+AGG + Chr2:16218008-16218027 MsG0280007494.01.T01:intron 25.0%
!!! ATTAGTTTCTGTAGTTTTTG+GGG + Chr2:16218351-16218370 MsG0280007494.01.T01:intron 25.0%
!!! ATTGTTTATGATTTTGAGTG+TGG - Chr2:16219456-16219475 None:intergenic 25.0%
!!! ATTTGCTAAGATGTTGTTTT+TGG + Chr2:16220633-16220652 MsG0280007494.01.T01:three_prime_UTR 25.0%
!!! ATTTTGTTTTCTGAAACCAT+CGG + Chr2:16220151-16220170 MsG0280007494.01.T01:intron 25.0%
!!! CATTAGTTTCTGTAGTTTTT+GGG + Chr2:16218350-16218369 MsG0280007494.01.T01:intron 25.0%
!!! CTTTTCTAGCAACAAATTTT+TGG + Chr2:16218001-16218020 MsG0280007494.01.T01:intron 25.0%
!!! GCAACAAATTTTTGGTTTTA+GGG + Chr2:16218009-16218028 MsG0280007494.01.T01:intron 25.0%
!!! TCATTAGTTTCTGTAGTTTT+TGG + Chr2:16218349-16218368 MsG0280007494.01.T01:intron 25.0%
!!! TTCCTTTTTTTTTCTCTACT+TGG + Chr2:16219783-16219802 MsG0280007494.01.T01:intron 25.0%
!!! TTCTAAATGTTGATTCAGAA+TGG + Chr2:16218792-16218811 MsG0280007494.01.T01:intron 25.0%
!!! TTTGCTAAGATGTTGTTTTT+GGG + Chr2:16220634-16220653 MsG0280007494.01.T01:three_prime_UTR 25.0%
!!! TTTTAGGGAATAGAAATGTA+TGG + Chr2:16218024-16218043 MsG0280007494.01.T01:intron 25.0%
ACAAAAGCAATCATTCTTAC+AGG + Chr2:16217317-16217336 MsG0280007494.01.T01:CDS 30.0%
ACAGGATAATAGATTAAGAG+AGG - Chr2:16220390-16220409 None:intergenic 30.0%
AGCAATGATAACAACAATGT+CGG - Chr2:16217609-16217628 None:intergenic 30.0%
AGCATTGTGTAATGTCAATT+GGG - Chr2:16219096-16219115 None:intergenic 30.0%
AGTTATCAGCAACATAAATG+AGG - Chr2:16218492-16218511 None:intergenic 30.0%
ATAGATACAGTAAAATGCTG+TGG + Chr2:16216110-16216129 MsG0280007494.01.T01:intron 30.0%
ATCACTCTGAGTTTAATTAC+AGG + Chr2:16217452-16217471 MsG0280007494.01.T01:intron 30.0%
ATGCTTTCAACTATATGTGT+AGG + Chr2:16216148-16216167 MsG0280007494.01.T01:intron 30.0%
CAAAAGCAATCATTCTTACA+GGG + Chr2:16217318-16217337 MsG0280007494.01.T01:CDS 30.0%
CAACAAACTCAAATTCATTG+AGG + Chr2:16215925-16215944 MsG0280007494.01.T01:five_prime_UTR 30.0%
CATGTCCTAGTAAATAAGAA+TGG - Chr2:16218233-16218252 None:intergenic 30.0%
CATTTAGAAGTCAATCAACA+TGG - Chr2:16218781-16218800 None:intergenic 30.0%
GAAAAGAATTCAAGAGCTTA+AGG + Chr2:16219725-16219744 MsG0280007494.01.T01:CDS 30.0%
GATTTCTAAGCTACAAATTG+TGG - Chr2:16216654-16216673 None:intergenic 30.0%
GTATGATATGCTCATTAAGA+AGG + Chr2:16220345-16220364 MsG0280007494.01.T01:CDS 30.0%
GTTTCACTCAGAAATTCAAT+GGG + Chr2:16215948-16215967 MsG0280007494.01.T01:exon 30.0%
TAAAAATCAAACCTTTGGCT+TGG - Chr2:16216011-16216030 None:intergenic 30.0%
TAACCTTTCGATTGATCAAA+AGG - Chr2:16217401-16217420 None:intergenic 30.0%
TAGGTAAAGTCAGATATAGT+AGG + Chr2:16220507-16220526 MsG0280007494.01.T01:three_prime_UTR 30.0%
TCAGCATCATTATCATATTC+AGG - Chr2:16219299-16219318 None:intergenic 30.0%
TCATCAAATGTTCAAGAATG+TGG + Chr2:16220300-16220319 MsG0280007494.01.T01:CDS 30.0%
TTATCCAAATCCATTTGAGA+AGG + Chr2:16219587-16219606 MsG0280007494.01.T01:CDS 30.0%
TTATTATGTGGTCCTAAAAC+AGG - Chr2:16220408-16220427 None:intergenic 30.0%
TTGTGAAACTAGTTGAGTTT+GGG - Chr2:16215738-16215757 None:intergenic 30.0%
TTTGTGAAACTAGTTGAGTT+TGG - Chr2:16215739-16215758 None:intergenic 30.0%
! AAATCCTTCTCAAATGGATT+TGG - Chr2:16219594-16219613 None:intergenic 30.0%
! AATCAACATGGTATTGAACA+TGG - Chr2:16218769-16218788 None:intergenic 30.0%
! GTCTCATTTATCACTTCTTT+TGG + Chr2:16218419-16218438 MsG0280007494.01.T01:intron 30.0%
! TAACCTTTTGATCAATCGAA+AGG + Chr2:16217395-16217414 MsG0280007494.01.T01:intron 30.0%
! TGATGAAATTTTGCTTCTAG+AGG + Chr2:16217873-16217892 MsG0280007494.01.T01:CDS 30.0%
! TTAAGTGTTGTATCATGCTT+TGG + Chr2:16220481-16220500 MsG0280007494.01.T01:three_prime_UTR 30.0%
! TTGTATCATGCTTTGGTAAT+AGG + Chr2:16220488-16220507 MsG0280007494.01.T01:three_prime_UTR 30.0%
!! GAAGGTGTGCATTTTATATT+TGG + Chr2:16219062-16219081 MsG0280007494.01.T01:intron 30.0%
!! GTAAGAATGATTGCTTTTGT+GGG - Chr2:16217317-16217336 None:intergenic 30.0%
!! TAAGAATGATTGCTTTTGTG+GGG - Chr2:16217316-16217335 None:intergenic 30.0%
!! TGTAAGAATGATTGCTTTTG+TGG - Chr2:16217318-16217337 None:intergenic 30.0%
!!! ACAGTTTTAGAATGCAAACT+TGG - Chr2:16220119-16220138 None:intergenic 30.0%
!!! TGATTGGTTGGTTTTTGTTT+TGG + Chr2:16218577-16218596 MsG0280007494.01.T01:intron 30.0%
!!! TTGCTAAGATGTTGTTTTTG+GGG + Chr2:16220635-16220654 MsG0280007494.01.T01:three_prime_UTR 30.0%
AAAATCGATGAATGCAAAGG+TGG - Chr2:16216509-16216528 None:intergenic 35.0%
AAAATTGCGACAAAGAAACG+AGG - Chr2:16215777-16215796 None:intergenic 35.0%
AAGCATGCATAGAACACTAT+AGG + Chr2:16218097-16218116 MsG0280007494.01.T01:CDS 35.0%
AATAGATTAAGAGAGGTCTC+AGG - Chr2:16220383-16220402 None:intergenic 35.0%
AATTAATTGCCTAGGAGTAG+CGG + Chr2:16217907-16217926 MsG0280007494.01.T01:intron 35.0%
ACAAAGAAACGAGGATGTTT+CGG - Chr2:16215768-16215787 None:intergenic 35.0%
AGAAACTGTAACCGTATGTT+TGG + Chr2:16216844-16216863 MsG0280007494.01.T01:intron 35.0%
AGATTTAGAGGTTAACGAGT+TGG + Chr2:16217663-16217682 MsG0280007494.01.T01:intron 35.0%
AGTGGAGATAATTCAGAATC+TGG + Chr2:16216195-16216214 MsG0280007494.01.T01:CDS 35.0%
AGTGTCCTTAAACTCCATTT+CGG - Chr2:16219333-16219352 None:intergenic 35.0%
AGTTGAAGCAGATAGATATC+TGG + Chr2:16219879-16219898 MsG0280007494.01.T01:CDS 35.0%
ATATTGTAGGGTCAGATTCT+GGG + Chr2:16218949-16218968 MsG0280007494.01.T01:intron 35.0%
ATCGAAGTGTAGGTTTGAAA+CGG + Chr2:16216867-16216886 MsG0280007494.01.T01:intron 35.0%
ATGCTCATTAAGAAGGGAAT+TGG + Chr2:16220352-16220371 MsG0280007494.01.T01:CDS 35.0%
ATGGAAGATTCCAACAAATC+TGG + Chr2:16218811-16218830 MsG0280007494.01.T01:CDS 35.0%
CACAAAATCGATGAATGCAA+AGG - Chr2:16216512-16216531 None:intergenic 35.0%
CAGCAATCATTTGTACAGAT+AGG - Chr2:16220255-16220274 None:intergenic 35.0%
CAGCATTGTGTAATGTCAAT+TGG - Chr2:16219097-16219116 None:intergenic 35.0%
CCAAATTCCTCAAGAAATGA+AGG + Chr2:16219221-16219240 MsG0280007494.01.T01:CDS 35.0%
CCTGGAATTGTTAAAATGGA+AGG + Chr2:16219044-16219063 MsG0280007494.01.T01:CDS 35.0%
CCTTCATTTCTTGAGGAATT+TGG - Chr2:16219224-16219243 None:intergenic 35.0%
CTATCATGTACCATTGTACT+TGG + Chr2:16216238-16216257 MsG0280007494.01.T01:intron 35.0%
CTATCTGTACAAATGATTGC+TGG + Chr2:16220253-16220272 MsG0280007494.01.T01:CDS 35.0%
CTCTTGCATCTTCAGATAAA+CGG - Chr2:16220230-16220249 None:intergenic 35.0%
CTGTCAATGACAAAAGAACT+AGG - Chr2:16219166-16219185 None:intergenic 35.0%
GACAAATTATCCTGACAACA+AGG - Chr2:16217820-16217839 None:intergenic 35.0%
GCATGAACATGTCATATTTC+CGG - Chr2:16219641-16219660 None:intergenic 35.0%
GGAATAGAAATGTATGGCAT+GGG + Chr2:16218030-16218049 MsG0280007494.01.T01:CDS 35.0%
GGATACCATCAAAATTGACA+GGG + Chr2:16220321-16220340 MsG0280007494.01.T01:CDS 35.0%
GGTGTTAAATCCTTCTCAAA+TGG - Chr2:16219600-16219619 None:intergenic 35.0%
GGTTTCACTCAGAAATTCAA+TGG + Chr2:16215947-16215966 MsG0280007494.01.T01:exon 35.0%
GTCAAGTTCTGTCAATGAAA+TGG + Chr2:16220032-16220051 MsG0280007494.01.T01:CDS 35.0%
GTTGATGTTGACAGTTGTAA+TGG + Chr2:16216967-16216986 MsG0280007494.01.T01:intron 35.0%
TACACTTCGATCCAAACATA+CGG - Chr2:16216858-16216877 None:intergenic 35.0%
TATATTGTAGGGTCAGATTC+TGG + Chr2:16218948-16218967 MsG0280007494.01.T01:intron 35.0%
TATTCAAACAAACACTCCAC+AGG - Chr2:16216997-16217016 None:intergenic 35.0%
TCAACTATATGTGTAGGTCA+AGG + Chr2:16216154-16216173 MsG0280007494.01.T01:intron 35.0%
TCTGGAGACATTAATGCATT+TGG - Chr2:16219988-16220007 None:intergenic 35.0%
TGCTGCGCATTTATTCAAAA+AGG + Chr2:16219387-16219406 MsG0280007494.01.T01:CDS 35.0%
TGGATACCATCAAAATTGAC+AGG + Chr2:16220320-16220339 MsG0280007494.01.T01:CDS 35.0%
TGGTCCTGGAATTGTTAAAA+TGG + Chr2:16219040-16219059 MsG0280007494.01.T01:CDS 35.0%
TGGTTACTTGTGATTGTAAC+AGG + Chr2:16218648-16218667 MsG0280007494.01.T01:intron 35.0%
TTGACTCTAGATGGAGAAAA+GGG - Chr2:16218711-16218730 None:intergenic 35.0%
TTTATGCTAAGATCTCCCAT+GGG - Chr2:16218678-16218697 None:intergenic 35.0%
! ATACACCCTGTCAATTTTGA+TGG - Chr2:16220329-16220348 None:intergenic 35.0%
! CAATTTTCATAACAGCGGTT+TGG - Chr2:16217569-16217588 None:intergenic 35.0%
! GCTGACCATTCTTATTTACT+AGG + Chr2:16218225-16218244 MsG0280007494.01.T01:intron 35.0%
! GTATTGAGTGCTTTTCTGTT+GGG + Chr2:16217278-16217297 MsG0280007494.01.T01:CDS 35.0%
! TAACGAGTTGGATCCAAATA+TGG + Chr2:16217675-16217694 MsG0280007494.01.T01:intron 35.0%
! TATTGAGTGCTTTTCTGTTG+GGG + Chr2:16217279-16217298 MsG0280007494.01.T01:CDS 35.0%
! TGTATTGAGTGCTTTTCTGT+TGG + Chr2:16217277-16217296 MsG0280007494.01.T01:CDS 35.0%
!! AACCAAAAGGCATCCAATAA+AGG + Chr2:16219005-16219024 MsG0280007494.01.T01:CDS 35.0%
!! ACCAAAAGGCATCCAATAAA+GGG + Chr2:16219006-16219025 MsG0280007494.01.T01:CDS 35.0%
!! CACTGATTTCAACCAAAGAA+GGG - Chr2:16219247-16219266 None:intergenic 35.0%
!! CCTTCCATTTTAACAATTCC+AGG - Chr2:16219047-16219066 None:intergenic 35.0%
!! TACACAATGCTGATTCTTTG+AGG + Chr2:16219105-16219124 MsG0280007494.01.T01:intron 35.0%
!!! ATTTTGCTTCTAGAGGTACT+TGG + Chr2:16217880-16217899 MsG0280007494.01.T01:intron 35.0%
!!! TGCTAAGATGTTGTTTTTGG+GGG + Chr2:16220636-16220655 MsG0280007494.01.T01:three_prime_UTR 35.0%
AAATGTATGGCATGGGAAAC+TGG + Chr2:16218037-16218056 MsG0280007494.01.T01:CDS 40.0%
AACAAATCTTCCAAGGGTGA+TGG - Chr2:16220663-16220682 None:intergenic 40.0%
AACGTTTGTGCTGCGATTTA+AGG + Chr2:16220194-16220213 MsG0280007494.01.T01:CDS 40.0%
AAGAAATGAAGGCCCTTCTT+TGG + Chr2:16219232-16219251 MsG0280007494.01.T01:CDS 40.0%
AATCACTTCTATCCACTCCA+CGG - Chr2:16220580-16220599 None:intergenic 40.0%
AATGTATGGCATGGGAAACT+GGG + Chr2:16218038-16218057 MsG0280007494.01.T01:CDS 40.0%
AATTGTGGACAATTCCAACG+TGG - Chr2:16216639-16216658 None:intergenic 40.0%
ACTAAGTGGAGTTAGCTACA+TGG - Chr2:16217732-16217751 None:intergenic 40.0%
AGAAAGAAGAATGCTGCAAG+TGG + Chr2:16216177-16216196 MsG0280007494.01.T01:CDS 40.0%
AGCTTCGAAATTATCACCGT+GGG + Chr2:16216806-16216825 MsG0280007494.01.T01:intron 40.0%
AGGACATGTCTCATGTTGTT+GGG + Chr2:16218245-16218264 MsG0280007494.01.T01:intron 40.0%
ATCTTCAGATAAACGGTTGG+AGG - Chr2:16220223-16220242 None:intergenic 40.0%
ATGGATGCAACTGGATACTA+TGG + Chr2:16220051-16220070 MsG0280007494.01.T01:CDS 40.0%
ATGTAGCTAACTCCACTTAG+TGG + Chr2:16217731-16217750 MsG0280007494.01.T01:intron 40.0%
ATGTTGACAGTTGTAATGGC+AGG + Chr2:16216971-16216990 MsG0280007494.01.T01:intron 40.0%
ATTGTAACAGGACTTCCCAT+GGG + Chr2:16218660-16218679 MsG0280007494.01.T01:intron 40.0%
CAATCATTCTTACAGGGTCA+TGG + Chr2:16217324-16217343 MsG0280007494.01.T01:CDS 40.0%
CAGAAAAGAACTTCTTGCCA+TGG + Chr2:16218273-16218292 MsG0280007494.01.T01:CDS 40.0%
CATGGGAGATCTTAGCATAA+AGG + Chr2:16218677-16218696 MsG0280007494.01.T01:CDS 40.0%
CCTTCTTTGGTTGAAATCAG+TGG + Chr2:16219245-16219264 MsG0280007494.01.T01:CDS 40.0%
CGTTTATCTGAAGATGCAAG+AGG + Chr2:16220228-16220247 MsG0280007494.01.T01:CDS 40.0%
CTTCATGTGTACATGTTCAG+TGG + Chr2:16216736-16216755 MsG0280007494.01.T01:intron 40.0%
CTTGACTCTAGATGGAGAAA+AGG - Chr2:16218712-16218731 None:intergenic 40.0%
CTTTATGCTAAGATCTCCCA+TGG - Chr2:16218679-16218698 None:intergenic 40.0%
GGGAATAGAAATGTATGGCA+TGG + Chr2:16218029-16218048 MsG0280007494.01.T01:intron 40.0%
GTATGTTTGGATCGAAGTGT+AGG + Chr2:16216857-16216876 MsG0280007494.01.T01:intron 40.0%
GTCAATGAAATGGATGCAAC+TGG + Chr2:16220042-16220061 MsG0280007494.01.T01:CDS 40.0%
GTCATTGACAGATTCTCCAA+TGG + Chr2:16219175-16219194 MsG0280007494.01.T01:intron 40.0%
GTTCATGCGCTTTCATACTA+AGG + Chr2:16219653-16219672 MsG0280007494.01.T01:CDS 40.0%
TAACTCCACTTAGTGGGATA+AGG + Chr2:16217738-16217757 MsG0280007494.01.T01:intron 40.0%
TAAGTCAAAATCTGGGCACA+TGG - Chr2:16217257-16217276 None:intergenic 40.0%
TAATTATCCTGCTAGACTGC+AGG + Chr2:16217426-16217445 MsG0280007494.01.T01:intron 40.0%
TAGCTTAGAAATCATCACCG+TGG + Chr2:16216661-16216680 MsG0280007494.01.T01:intron 40.0%
TAGCTTCGAAATTATCACCG+TGG + Chr2:16216805-16216824 MsG0280007494.01.T01:intron 40.0%
TAGGACATGTCTCATGTTGT+TGG + Chr2:16218244-16218263 MsG0280007494.01.T01:intron 40.0%
TATCTGCTTCAACTGAACTG+CGG - Chr2:16219873-16219892 None:intergenic 40.0%
TATTTCGAATGCGAAACACG+TGG + Chr2:16216394-16216413 MsG0280007494.01.T01:intron 40.0%
TCATTCAAAGCCTGACATAC+CGG - Chr2:16218156-16218175 None:intergenic 40.0%
TGCATCTTCAGATAAACGGT+TGG - Chr2:16220226-16220245 None:intergenic 40.0%
TGGTTATAACGCGAAAAGAC+AGG + Chr2:16219265-16219284 MsG0280007494.01.T01:CDS 40.0%
TGTACTGTGTAACTGCACTA+TGG + Chr2:16216286-16216305 MsG0280007494.01.T01:intron 40.0%
TGTAGCTAACTCCACTTAGT+GGG + Chr2:16217732-16217751 MsG0280007494.01.T01:intron 40.0%
TTAAATTCACCGCTACTCCT+AGG - Chr2:16217919-16217938 None:intergenic 40.0%
! AATTCAGAATCTGGAGTTGC+AGG + Chr2:16216204-16216223 MsG0280007494.01.T01:CDS 40.0%
! AGAGCTTAAGGTTTGAGACA+TGG + Chr2:16219737-16219756 MsG0280007494.01.T01:intron 40.0%
! CAGATCTTTTTAATCCACCG+TGG + Chr2:16220560-16220579 MsG0280007494.01.T01:three_prime_UTR 40.0%
! CATTTGTTGAACATGATCGC+AGG + Chr2:16219828-16219847 MsG0280007494.01.T01:intron 40.0%
! GCTTCTGATTTTTCGCTGAT+TGG + Chr2:16218561-16218580 MsG0280007494.01.T01:intron 40.0%
! TAATACGGTTCCTTGTTGTC+AGG + Chr2:16217807-16217826 MsG0280007494.01.T01:intron 40.0%
! TCTCCAATGGACAGAGATTT+TGG + Chr2:16219188-16219207 MsG0280007494.01.T01:CDS 40.0%
! TCTCCATCTAGAGTCAAGTA+AGG + Chr2:16218714-16218733 MsG0280007494.01.T01:intron 40.0%
!! AAAAGGCATCCAATAAAGGG+CGG + Chr2:16219009-16219028 MsG0280007494.01.T01:CDS 40.0%
!! ATTTTGAGTGTGGATGACTC+AGG - Chr2:16219446-16219465 None:intergenic 40.0%
!! CCACTGATTTCAACCAAAGA+AGG - Chr2:16219248-16219267 None:intergenic 40.0%
!! CTGATTTTTCGCTGATTGGT+TGG + Chr2:16218565-16218584 MsG0280007494.01.T01:intron 40.0%
!!! GTTTTTTGTGAGTCAGGTCA+AGG + Chr2:16217151-16217170 MsG0280007494.01.T01:intron 40.0%
!!! TTCCTGGTTTTTTGTGAGTC+AGG + Chr2:16217145-16217164 MsG0280007494.01.T01:intron 40.0%
AACAATGTCGGCGAAACTAG+TGG - Chr2:16217597-16217616 None:intergenic 45.0%
AACTTCTTGCCATGGCGAAA+GGG + Chr2:16218281-16218300 MsG0280007494.01.T01:CDS 45.0%
AATTCAATGGGTCGTTCTCG+TGG + Chr2:16215960-16215979 MsG0280007494.01.T01:exon 45.0%
ACGATGATGATCCAAGCCAA+AGG + Chr2:16215997-16216016 MsG0280007494.01.T01:CDS 45.0%
ACTCGCCGAAATGGAGTTTA+AGG + Chr2:16219325-16219344 MsG0280007494.01.T01:CDS 45.0%
AGAAGGGCCTTCATTTCTTG+AGG - Chr2:16219231-16219250 None:intergenic 45.0%
ATTAGAAGTCAAACGGCCAG+TGG - Chr2:16218839-16218858 None:intergenic 45.0%
CAGCCTTACTTGACTCTAGA+TGG - Chr2:16218720-16218739 None:intergenic 45.0%
CATCATCTGCATTCCAGTCT+GGG - Chr2:16217858-16217877 None:intergenic 45.0%
CCGAGGAAAAGTCAATATGC+CGG + Chr2:16219619-16219638 MsG0280007494.01.T01:CDS 45.0%
CCTCCAAAATCTCTGTCCAT+TGG - Chr2:16219194-16219213 None:intergenic 45.0%
GACCTGACTCACAAAAAACC+AGG - Chr2:16217150-16217169 None:intergenic 45.0%
GATTGTAACAGGACTTCCCA+TGG + Chr2:16218659-16218678 MsG0280007494.01.T01:intron 45.0%
GTTTAAGGACACTGACACTG+AGG + Chr2:16219340-16219359 MsG0280007494.01.T01:CDS 45.0%
TCATCATCTGCATTCCAGTC+TGG - Chr2:16217859-16217878 None:intergenic 45.0%
TCCAACGTGGAAACAAACAC+AGG - Chr2:16216626-16216645 None:intergenic 45.0%
TCTGGCGCATAAGAGAAGAA+AGG + Chr2:16219897-16219916 MsG0280007494.01.T01:CDS 45.0%
TGAGAAGGATTTAACACCCG+AGG + Chr2:16219602-16219621 MsG0280007494.01.T01:CDS 45.0%
TGAGCAATTACTCGCCGAAA+TGG + Chr2:16219316-16219335 MsG0280007494.01.T01:CDS 45.0%
TGCAGCTAGTGCTAACCAAA+AGG + Chr2:16218992-16219011 MsG0280007494.01.T01:CDS 45.0%
TGGATGGAAATCACCGTGTT+CGG - Chr2:16216420-16216439 None:intergenic 45.0%
TTAATGTCTCCAGACTCTGC+TGG + Chr2:16219994-16220013 MsG0280007494.01.T01:CDS 45.0%
! ATTATCACCGTGGGAAGTGT+CGG + Chr2:16216815-16216834 MsG0280007494.01.T01:intron 45.0%
! CCAATGGACAGAGATTTTGG+AGG + Chr2:16219191-16219210 MsG0280007494.01.T01:CDS 45.0%
! CTTTTTAATCCACCGTGGAG+TGG + Chr2:16220565-16220584 MsG0280007494.01.T01:three_prime_UTR 45.0%
! GCAACAATTTTCTCGCATCC+TGG - Chr2:16216695-16216714 None:intergenic 45.0%
! GCCCTTTATTGGATGCCTTT+TGG - Chr2:16219010-16219029 None:intergenic 45.0%
! GTACACATGAAGTGCTTGTC+TGG - Chr2:16216728-16216747 None:intergenic 45.0%
! TCCAACAAATCTGGTTCCAC+TGG + Chr2:16218820-16218839 MsG0280007494.01.T01:CDS 45.0%
! TGATGAAAGAAAGCGCAGGA+AGG + Chr2:16219539-16219558 MsG0280007494.01.T01:CDS 45.0%
! TTTGGAACCCCGTGATTGTT+CGG - Chr2:16219970-16219989 None:intergenic 45.0%
!! AAAGGCATCCAATAAAGGGC+GGG + Chr2:16219010-16219029 MsG0280007494.01.T01:CDS 45.0%
!! TGTGTTGCTTGCTCTTCGTA+AGG + Chr2:16216528-16216547 MsG0280007494.01.T01:intron 45.0%
!!! CCGGCATATTGACTTTTCCT+CGG - Chr2:16219622-16219641 None:intergenic 45.0%
!!! CGGCATATTGACTTTTCCTC+GGG - Chr2:16219621-16219640 None:intergenic 45.0%
!! TAATCATAAAAATAAAATTT+AGG + Chr2:16220425-16220444 MsG0280007494.01.T01:three_prime_UTR 5.0%
!! TTTCTTTATATAAAAATTTA+GGG + Chr2:16215821-16215840 MsG0280007494.01.T01:five_prime_UTR 5.0%
!!! CATTTTTATTTTATAAATAT+TGG + Chr2:16218603-16218622 MsG0280007494.01.T01:intron 5.0%
!!! TTTTCTTTATATAAAAATTT+AGG + Chr2:16215820-16215839 MsG0280007494.01.T01:five_prime_UTR 5.0%
AAAGCCTGACATACCGGAAG+AGG - Chr2:16218150-16218169 None:intergenic 50.0%
AAGCCTGACATACCGGAAGA+GGG - Chr2:16218149-16218168 None:intergenic 50.0%
AAGGAGCAGGTGAAGCGAAA+AGG + Chr2:16217170-16217189 MsG0280007494.01.T01:CDS 50.0%
AGGAGCAGGTGAAGCGAAAA+GGG + Chr2:16217171-16217190 MsG0280007494.01.T01:CDS 50.0%
ATACCGGAAGAGGGAAGAAC+GGG - Chr2:16218140-16218159 None:intergenic 50.0%
ATGTGGTCCCGAACAATCAC+GGG + Chr2:16219959-16219978 MsG0280007494.01.T01:CDS 50.0%
CAAAGGTGGCGACATGCAAT+TGG - Chr2:16216495-16216514 None:intergenic 50.0%
CATACCGGAAGAGGGAAGAA+CGG - Chr2:16218141-16218160 None:intergenic 50.0%
CATGTGGTCCCGAACAATCA+CGG + Chr2:16219958-16219977 MsG0280007494.01.T01:CDS 50.0%
CCACTTAGTGGGATAAGGCT+TGG + Chr2:16217743-16217762 MsG0280007494.01.T01:intron 50.0%
CTGGCAGAATTTACAGCCGA+TGG - Chr2:16220170-16220189 None:intergenic 50.0%
GAACTTCTTGCCATGGCGAA+AGG + Chr2:16218280-16218299 MsG0280007494.01.T01:CDS 50.0%
GCAGAAGTTGCTGAGCATGT+TGG + Chr2:16218060-16218079 MsG0280007494.01.T01:CDS 50.0%
GCCAGTGGAACCAGATTTGT+TGG - Chr2:16218824-16218843 None:intergenic 50.0%
GCCTGTGTTTGTTTCCACGT+TGG + Chr2:16216622-16216641 MsG0280007494.01.T01:intron 50.0%
GGCACATGGCACACTTGATA+CGG - Chr2:16217243-16217262 None:intergenic 50.0%
TAAGGACACTGACACTGAGG+AGG + Chr2:16219343-16219362 MsG0280007494.01.T01:CDS 50.0%
TCCAGTCTGGGCAAATGAGA+GGG - Chr2:16217846-16217865 None:intergenic 50.0%
TGATCAACCTGCAGTCTAGC+AGG - Chr2:16217436-16217455 None:intergenic 50.0%
TTCCAGTCTGGGCAAATGAG+AGG - Chr2:16217847-16217866 None:intergenic 50.0%
TTGACAGAACTTGACCCTGC+AGG - Chr2:16220027-16220046 None:intergenic 50.0%
TTGGAACCCCGTGATTGTTC+GGG - Chr2:16219969-16219988 None:intergenic 50.0%
! AAGGCATCCAATAAAGGGCG+GGG + Chr2:16219011-16219030 MsG0280007494.01.T01:CDS 50.0%
! CATCGGCTGTAAATTCTGCC+AGG + Chr2:16220168-16220187 MsG0280007494.01.T01:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - Chr2:16217746-16217765 None:intergenic 50.0%
! GGCTTGATGAAAGAAAGCGC+AGG + Chr2:16219535-16219554 MsG0280007494.01.T01:intron 50.0%
!! AGCGAGAGAAAGTGCTCATG+TGG + Chr2:16219942-16219961 MsG0280007494.01.T01:CDS 50.0%
!! GCAGCATGTGTGTTGACTGA+GGG - Chr2:16218975-16218994 None:intergenic 50.0%
!! TGCAGCATGTGTGTTGACTG+AGG - Chr2:16218976-16218995 None:intergenic 50.0%
!! TTATCACCGTGGGAAGTGTC+GGG + Chr2:16216816-16216835 MsG0280007494.01.T01:intron 50.0%
AATAAAGGGCGGGGGAAAGG+TGG + Chr2:16219020-16219039 MsG0280007494.01.T01:CDS 55.0%
ACCTTTCCCCCGCCCTTTAT+TGG - Chr2:16219021-16219040 None:intergenic 55.0%
AGAACTTGACCCTGCAGGTC+TGG - Chr2:16220022-16220041 None:intergenic 55.0%
AGGCATCCAATAAAGGGCGG+GGG + Chr2:16219012-16219031 MsG0280007494.01.T01:CDS 55.0%
ATCACCGTGGAATGTGTGCC+AGG + Chr2:16216674-16216693 MsG0280007494.01.T01:intron 55.0%
CACTTCTATCCACTCCACGG+TGG - Chr2:16220577-16220596 None:intergenic 55.0%
CAGTTGTAATGGCAGGCCTG+TGG + Chr2:16216978-16216997 MsG0280007494.01.T01:intron 55.0%
CGCAGCACAAACGTTTCTCC+TGG - Chr2:16220189-16220208 None:intergenic 55.0%
CTTCCCTCTTCCGGTATGTC+AGG + Chr2:16218143-16218162 MsG0280007494.01.T01:intron 55.0%
GCATCCTGGCACACATTCCA+CGG - Chr2:16216681-16216700 None:intergenic 55.0%
TACCGGAAGAGGGAAGAACG+GGG - Chr2:16218139-16218158 None:intergenic 55.0%
TCCAATAAAGGGCGGGGGAA+AGG + Chr2:16219017-16219036 MsG0280007494.01.T01:CDS 55.0%
TCCCTCTCATTTGCCCAGAC+TGG + Chr2:16217842-16217861 MsG0280007494.01.T01:CDS 55.0%
TGTGAGTCAGGTCAAGGAGC+AGG + Chr2:16217157-16217176 MsG0280007494.01.T01:intron 55.0%
TGTGGTCCCGAACAATCACG+GGG + Chr2:16219960-16219979 MsG0280007494.01.T01:CDS 55.0%
! GTGCTTTTCTGTTGGGGCTG+AGG + Chr2:16217285-16217304 MsG0280007494.01.T01:CDS 55.0%
!! TTTTGGGGGACCATCACCCT+TGG + Chr2:16220650-16220669 MsG0280007494.01.T01:three_prime_UTR 55.0%
CTCCCCGTTCTTCCCTCTTC+CGG + Chr2:16218134-16218153 MsG0280007494.01.T01:CDS 60.0%
CTGCTGGTACCAGACCTGCA+GGG + Chr2:16220010-16220029 MsG0280007494.01.T01:CDS 60.0%
CTTGCCATGGCGAAAGGGCA+GGG + Chr2:16218286-16218305 MsG0280007494.01.T01:CDS 60.0%
GCGAAACACGTGGCCGAACA+CGG + Chr2:16216404-16216423 MsG0280007494.01.T01:intron 60.0%
GGGCAGGGTGAGGACAAGAA+AGG + Chr2:16218301-16218320 MsG0280007494.01.T01:CDS 60.0%
GGTCTGGTACCAGCAGAGTC+TGG - Chr2:16220006-16220025 None:intergenic 60.0%
TCGCATCCCGACACTTCCCA+CGG - Chr2:16216825-16216844 None:intergenic 60.0%
TCTGCTGGTACCAGACCTGC+AGG + Chr2:16220009-16220028 MsG0280007494.01.T01:CDS 60.0%
TCTTGCCATGGCGAAAGGGC+AGG + Chr2:16218285-16218304 MsG0280007494.01.T01:CDS 60.0%
CATGGCGAAAGGGCAGGGTG+AGG + Chr2:16218291-16218310 MsG0280007494.01.T01:CDS 65.0%
CTCACCCTGCCCTTTCGCCA+TGG - Chr2:16218293-16218312 None:intergenic 65.0%
TCGCAGGAAGCTCGTGCTGC+TGG + Chr2:16219844-16219863 MsG0280007494.01.T01:intron 65.0%
GGGCGGGGGAAAGGTGGTCC+TGG + Chr2:16219026-16219045 MsG0280007494.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 16215720 16220682 16215720 ID=MsG0280007494.01;Name=MsG0280007494.01
Chr2 mRNA 16215720 16220682 16215720 ID=MsG0280007494.01.T01;Parent=MsG0280007494.01;Name=MsG0280007494.01.T01;_AED=0.40;_eAED=0.40;_QI=246|1|1|1|1|1|13|298|552
Chr2 exon 16215720 16216018 16215720 ID=MsG0280007494.01.T01:exon:1175;Parent=MsG0280007494.01.T01
Chr2 exon 16216170 16216225 16216170 ID=MsG0280007494.01.T01:exon:1176;Parent=MsG0280007494.01.T01
Chr2 exon 16217167 16217345 16217167 ID=MsG0280007494.01.T01:exon:1177;Parent=MsG0280007494.01.T01
Chr2 exon 16217829 16217894 16217829 ID=MsG0280007494.01.T01:exon:1178;Parent=MsG0280007494.01.T01
Chr2 exon 16218030 16218155 16218030 ID=MsG0280007494.01.T01:exon:1179;Parent=MsG0280007494.01.T01
Chr2 exon 16218247 16218322 16218247 ID=MsG0280007494.01.T01:exon:1180;Parent=MsG0280007494.01.T01
Chr2 exon 16218670 16218730 16218670 ID=MsG0280007494.01.T01:exon:1181;Parent=MsG0280007494.01.T01
Chr2 exon 16218810 16218868 16218810 ID=MsG0280007494.01.T01:exon:1182;Parent=MsG0280007494.01.T01
Chr2 exon 16218958 16219065 16218958 ID=MsG0280007494.01.T01:exon:1183;Parent=MsG0280007494.01.T01
Chr2 exon 16219186 16219408 16219186 ID=MsG0280007494.01.T01:exon:1184;Parent=MsG0280007494.01.T01
Chr2 exon 16219536 16219746 16219536 ID=MsG0280007494.01.T01:exon:1185;Parent=MsG0280007494.01.T01
Chr2 exon 16219850 16220095 16219850 ID=MsG0280007494.01.T01:exon:1186;Parent=MsG0280007494.01.T01
Chr2 exon 16220190 16220682 16220190 ID=MsG0280007494.01.T01:exon:1187;Parent=MsG0280007494.01.T01
Chr2 five_prime_UTR 16215720 16215965 16215720 ID=MsG0280007494.01.T01:five_prime_utr;Parent=MsG0280007494.01.T01
Chr2 CDS 16215966 16216018 16215966 ID=MsG0280007494.01.T01:cds;Parent=MsG0280007494.01.T01
Chr2 CDS 16216170 16216225 16216170 ID=MsG0280007494.01.T01:cds;Parent=MsG0280007494.01.T01
Chr2 CDS 16217167 16217345 16217167 ID=MsG0280007494.01.T01:cds;Parent=MsG0280007494.01.T01
Chr2 CDS 16217829 16217894 16217829 ID=MsG0280007494.01.T01:cds;Parent=MsG0280007494.01.T01
Chr2 CDS 16218030 16218155 16218030 ID=MsG0280007494.01.T01:cds;Parent=MsG0280007494.01.T01
Chr2 CDS 16218247 16218322 16218247 ID=MsG0280007494.01.T01:cds;Parent=MsG0280007494.01.T01
Chr2 CDS 16218670 16218730 16218670 ID=MsG0280007494.01.T01:cds;Parent=MsG0280007494.01.T01
Chr2 CDS 16218810 16218868 16218810 ID=MsG0280007494.01.T01:cds;Parent=MsG0280007494.01.T01
Chr2 CDS 16218958 16219065 16218958 ID=MsG0280007494.01.T01:cds;Parent=MsG0280007494.01.T01
Chr2 CDS 16219186 16219408 16219186 ID=MsG0280007494.01.T01:cds;Parent=MsG0280007494.01.T01
Chr2 CDS 16219536 16219746 16219536 ID=MsG0280007494.01.T01:cds;Parent=MsG0280007494.01.T01
Chr2 CDS 16219850 16220095 16219850 ID=MsG0280007494.01.T01:cds;Parent=MsG0280007494.01.T01
Chr2 CDS 16220190 16220384 16220190 ID=MsG0280007494.01.T01:cds;Parent=MsG0280007494.01.T01
Chr2 three_prime_UTR 16220385 16220682 16220385 ID=MsG0280007494.01.T01:three_prime_utr;Parent=MsG0280007494.01.T01
Gene Sequence

>MsG0280007494.01.T01

ATGGGTCGTTCTCGTGGTAATTTTCATCATAACGATGATGATCCAAGCCAAAGGTCAAGGAGAAAGAAGAATGCTGCAAGTGGAGATAATTCAGAATCTGGAGTTGCAGGTCAAGGAGCAGGTGAAGCGAAAAGGGCTTTGTATCATTGCAATTACTGTAATAAAGATATTACAGGAAAAATCCGTATCAAGTGTGCCATGTGCCCAGATTTTGACTTATGTATTGAGTGCTTTTCTGTTGGGGCTGAGGTGACACCCCACAAAAGCAATCATTCTTACAGGGTCATGGATAATTTGTCTTTCCCTCTCATTTGCCCAGACTGGAATGCAGATGATGAAATTTTGCTTCTAGAGGGAATAGAAATGTATGGCATGGGAAACTGGGCAGAAGTTGCTGAGCATGTTGGAACAAAGAACAAAGAAGCATGCATAGAACACTATAGGAATGTGTACTTAAACTCCCCGTTCTTCCCTCTTCCGGACATGTCTCATGTTGTTGGGAAAAACAGAAAAGAACTTCTTGCCATGGCGAAAGGGCAGGGTGAGGACAAGAAAGGACTTCCCATGGGAGATCTTAGCATAAAGGAAGAATCACCCTTTTCTCCATCTAGAGTCAAAATGGAAGATTCCAACAAATCTGGTTCCACTGGCCGTTTGACTTCTAATATGAATTCAGGGTCAGATTCTGGGCCCTCAGTCAACACACATGCTGCAGCTAGTGCTAACCAAAAGGCATCCAATAAAGGGCGGGGGAAAGGTGGTCCTGGAATTGTTAAAATGGAAGATTCTCCAATGGACAGAGATTTTGGAGGAAATAAGCCAAATTCCTCAAGAAATGAAGGCCCTTCTTTGGTTGAAATCAGTGGTTATAACGCGAAAAGACAGGAATTCGATCCTGAATATGATAATGATGCTGAGCAATTACTCGCCGAAATGGAGTTTAAGGACACTGACACTGAGGAGGAGCGAGAGATCAAACTTCGTGTGCTGCGCATTTATTCAAAAAGGCTTGATGAAAGAAAGCGCAGGAAGGAATTCATACTTGAAAGAAATTTGCTTTATCCAAATCCATTTGAGAAGGATTTAACACCCGAGGAAAAGTCAATATGCCGGAAATATGACATGTTCATGCGCTTTCATACTAAGGAAGAGCACGATGAATTACTCAGAACCGTTATCTCTGAACATAGGACTCTGAAAAGAATTCAAGAGCTTAAGGAAGCTCGTGCTGCTGGTTGCCGCAGTTCAGTTGAAGCAGATAGATATCTGGCGCATAAGAGAAGAAAGGAATCTGAAGAAAGTGCTTGTAGAGCGAGAGAAAGTGCTCATGTGGTCCCGAACAATCACGGGGTTCCAAATGCATTAATGTCTCCAGACTCTGCTGGTACCAGACCTGCAGGGTCAAGTTCTGTCAATGAAATGGATGCAACTGGATACTATGGAGCAGATTTACTTTCTGAAGCTGAGAAACGTTTGTGCTGCGATTTAAGGTTGCCTCCAACCGTTTATCTGAAGATGCAAGAGGACCTATCTGTACAAATGATTGCTGGCAACGTCTCTTCAAAATCTGATGCTCATCAAATGTTCAAGAATGTGGATACCATCAAAATTGACAGGGTGTATGATATGCTCATTAAGAAGGGAATTGGTTCATCCTGA

Protein sequence

>MsG0280007494.01.T01

MGRSRGNFHHNDDDPSQRSRRKKNAASGDNSESGVAGQGAGEAKRALYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHSYRVMDNLSFPLICPDWNADDEILLLEGIEMYGMGNWAEVAEHVGTKNKEACIEHYRNVYLNSPFFPLPDMSHVVGKNRKELLAMAKGQGEDKKGLPMGDLSIKEESPFSPSRVKMEDSNKSGSTGRLTSNMNSGSDSGPSVNTHAAASANQKASNKGRGKGGPGIVKMEDSPMDRDFGGNKPNSSRNEGPSLVEISGYNAKRQEFDPEYDNDAEQLLAEMEFKDTDTEEEREIKLRVLRIYSKRLDERKRRKEFILERNLLYPNPFEKDLTPEEKSICRKYDMFMRFHTKEEHDELLRTVISEHRTLKRIQELKEARAAGCRSSVEADRYLAHKRRKESEESACRARESAHVVPNNHGVPNALMSPDSAGTRPAGSSSVNEMDATGYYGADLLSEAEKRLCCDLRLPPTVYLKMQEDLSVQMIAGNVSSKSDAHQMFKNVDTIKIDRVYDMLIKKGIGSS*