AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003773.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003773.01.T01 MTR_7g035440 40.777 103 52 3 304 399 13 113 1.91e-14 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003773.01.T01 AT1G04130 58.278 302 93 2 64 333 1 301 2.85e-121 356
MsG0180003773.01.T01 AT1G04130 51.707 205 66 2 161 333 1 204 1.17e-64 207
MsG0180003773.01.T01 AT1G56440 35.542 166 91 8 98 261 78 229 3.41e-13 71.2
MsG0180003773.01.T01 AT1G56440 35.542 166 91 8 98 261 88 239 3.85e-13 71.2

Find 128 sgRNAs with CRISPR-Local

Find 509 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCTTTCAGGCTGGTGTTC+TGG 0.154241 1:-68049084 MsG0180003773.01.T01:intron
GTAATTCCATTAAAATTTAT+TGG 0.165190 1:-68042044 MsG0180003773.01.T01:three_prime_UTR
CTTCTTCAATTCCTCATTCT+TGG 0.218109 1:+68046831 None:intergenic
GTCTTTCAGGCTGGTGTTCT+GGG 0.234737 1:-68049083 MsG0180003773.01.T01:intron
GTCACTGACTTTCAAAACTA+TGG 0.248375 1:+68041937 None:intergenic
TAAAAGAGCGTGGACTTTAC+AGG 0.289074 1:-68042407 MsG0180003773.01.T01:three_prime_UTR
TCTTACCCATCTTCACATAT+TGG 0.336932 1:+68047817 None:intergenic
GTTCTGGGTTGTGTATCTTA+TGG 0.343086 1:-68049068 MsG0180003773.01.T01:CDS
TTGTCAAATGGGTCTTCATT+TGG 0.352533 1:-68046857 MsG0180003773.01.T01:CDS
GCAGATTGAAACTAAGATAC+TGG 0.354334 1:-68046800 MsG0180003773.01.T01:CDS
TTCTTCAATTCCTCATTCTT+GGG 0.354589 1:+68046832 None:intergenic
ACTCCTTCAATATCTATTAG+AGG 0.356893 1:-68045893 MsG0180003773.01.T01:CDS
GCCCATGTTAATTTGCTACT+TGG 0.360457 1:-68047702 MsG0180003773.01.T01:CDS
CCATCTTCTTCATCAGAATC+TGG 0.383305 1:+68042581 None:intergenic
CCTATGTATCGAGAACTTAC+TGG 0.383520 1:-68046412 MsG0180003773.01.T01:CDS
GCTACTAGTGGGGAAGTTAT+TGG 0.385514 1:-68045859 MsG0180003773.01.T01:CDS
TGCTTTGCAGATAACCTTGA+TGG 0.391125 1:-68043419 MsG0180003773.01.T01:intron
ATTGACTACGACTTATTAGT+AGG 0.397440 1:-68041792 MsG0180003773.01.T01:three_prime_UTR
TTAAAATTTATTGGAATACA+TGG 0.398376 1:-68042035 MsG0180003773.01.T01:three_prime_UTR
TGTTTCCTCGTTGGCATCAA+AGG 0.399980 1:+68042240 None:intergenic
GAAAATAGAGGCTTGAAGAT+TGG 0.400992 1:-68046439 MsG0180003773.01.T01:CDS
CTTTCAAAACTATGGATTGA+AGG 0.407960 1:+68041945 None:intergenic
CCAAGGTGCCTTGCAACTTA+AGG 0.410127 1:-68043268 MsG0180003773.01.T01:CDS
ATTCATAATACAGAGCTCTA+TGG 0.412736 1:-68042620 MsG0180003773.01.T01:intron
TCGAACTCCAGGCTCTTATC+CGG 0.417752 1:-68049020 MsG0180003773.01.T01:CDS
TGATAGCAGCAATGGCTTCA+AGG 0.419657 1:+68047951 None:intergenic
GTACACACCTTTATATTTGA+AGG 0.424038 1:+68047630 None:intergenic
TCATCAAATGGACTAGGATC+TGG 0.424393 1:+68049698 None:intergenic
ACAAAAGTAACATCCTTCAT+TGG 0.426238 1:-68046369 MsG0180003773.01.T01:CDS
TGATTCATCCCTTGTGCTCA+TGG 0.432104 1:-68043306 MsG0180003773.01.T01:CDS
ATCGAGAACTTACTGGGTTA+AGG 0.432106 1:-68046405 MsG0180003773.01.T01:CDS
AAAGGTTTCTCCACCTCCTC+TGG 0.432372 1:+68043339 None:intergenic
CACATTCTCCAGTACGTTGT+AGG 0.434585 1:+68042311 None:intergenic
ATTCAACGAAAAGGAAGCTT+TGG 0.437825 1:+68046903 None:intergenic
ATGCAGCTTCCAGGCCGATC+AGG 0.438084 1:-68042066 MsG0180003773.01.T01:intron
AGCACAAGACTATTGTCAAA+TGG 0.442253 1:-68046869 MsG0180003773.01.T01:CDS
AGAGGAGGTGGAGAAACCTT+TGG 0.446298 1:-68043337 MsG0180003773.01.T01:CDS
GGGTAACCAATATGTGAAGA+TGG 0.450218 1:-68047823 MsG0180003773.01.T01:CDS
GAAGGTACATTCAGTTCAAA+TGG 0.454945 1:+68049722 None:intergenic
GTTGTCCCCTTCAAATATAA+AGG 0.456100 1:-68047637 MsG0180003773.01.T01:intron
AAGGGCCCTGTCTTCAAACC+TGG 0.463397 1:+68042259 None:intergenic
AAAACATCGTCTGTTGTCAT+TGG 0.464850 1:+68049746 None:intergenic
CTCCGCCCAGGTTTGAAGAC+AGG 0.466135 1:-68042265 MsG0180003773.01.T01:three_prime_UTR
GTTTCCTCGTTGGCATCAAA+GGG 0.474169 1:+68042241 None:intergenic
GTTTCTGCTATAGAAAATAG+AGG 0.479624 1:-68046451 MsG0180003773.01.T01:CDS
AAATAGCTAGCCAGAGGAGG+TGG 0.483174 1:-68043349 MsG0180003773.01.T01:CDS
TCTGCATACAAAAGAAGAAC+AGG 0.488330 1:+68046346 None:intergenic
AACGTACTGGAGAATGTGGC+TGG 0.489443 1:-68042306 MsG0180003773.01.T01:three_prime_UTR
GCACAAGACTATTGTCAAAT+GGG 0.491678 1:-68046868 MsG0180003773.01.T01:CDS
TTCCCTCTAATAGATATTGA+AGG 0.495729 1:+68045890 None:intergenic
CGAACTCCAGGCTCTTATCC+GGG 0.498006 1:-68049019 MsG0180003773.01.T01:CDS
GATGGCGCTATGGATGGAAA+AGG 0.498578 1:-68048008 MsG0180003773.01.T01:CDS
ATCCAACGAATTCAACGAAA+AGG 0.499699 1:+68046894 None:intergenic
TGCATAAATTTCAGAATGAA+AGG 0.500982 1:+68043388 None:intergenic
TTTCATCAAGGTCGAACTCC+AGG 0.502137 1:-68049031 MsG0180003773.01.T01:CDS
ATGAATCAGTTTCAATCCAA+AGG 0.504713 1:+68043321 None:intergenic
ATCTTCAGCTTTAGAACTCA+AGG 0.507144 1:-68047924 MsG0180003773.01.T01:intron
CACTTGTTCCTTAAGTTGCA+AGG 0.509247 1:+68043260 None:intergenic
TGCCCTTGTGTAGCAATCAA+TGG 0.510437 1:+68047779 None:intergenic
TACACACCTTTATATTTGAA+GGG 0.513059 1:+68047631 None:intergenic
TGGATTGAAGGGTGCTCTTG+TGG 0.515096 1:+68041957 None:intergenic
TGTAAACAACACGCAGCTCT+AGG 0.516136 1:-68042211 MsG0180003773.01.T01:three_prime_UTR
AAAGAAGAACAGGCCAATGA+AGG 0.520736 1:+68046356 None:intergenic
CAGGAGGACAATCTGTTGAA+AGG 0.523173 1:-68042388 MsG0180003773.01.T01:three_prime_UTR
TTTCAAAACTATGGATTGAA+GGG 0.526238 1:+68041946 None:intergenic
ACAGATCAGTGTTTCCTCGT+TGG 0.528620 1:+68042231 None:intergenic
AGATTCTTTGATAGCAGCAA+TGG 0.528920 1:+68047943 None:intergenic
GTAGGCTCGTGTCCCGCTGA+AGG 0.529436 1:+68042329 None:intergenic
TCATTTGGATCCCAAGAATG+AGG 0.529648 1:-68046842 MsG0180003773.01.T01:CDS
CTATGTATCGAGAACTTACT+GGG 0.529659 1:-68046411 MsG0180003773.01.T01:CDS
GAATTGGAAATTCCTTCAGC+GGG 0.530854 1:-68042341 MsG0180003773.01.T01:three_prime_UTR
CCTTAAGTTGCAAGGCACCT+TGG 0.532329 1:+68043268 None:intergenic
GGCAACGATGGCGCTATGGA+TGG 0.533170 1:-68048014 MsG0180003773.01.T01:CDS
GACACGAGCCTACAACGTAC+TGG 0.536889 1:-68042319 MsG0180003773.01.T01:three_prime_UTR
GAAATCCTCAATGAAGTCAC+TGG 0.541468 1:+68046315 None:intergenic
CATTGAAAGCCATGAGCACA+AGG 0.542865 1:+68043297 None:intergenic
CCAGATTCTGATGAAGAAGA+TGG 0.544836 1:-68042581 MsG0180003773.01.T01:three_prime_UTR
ATACTCGGATCTTCATCAAA+TGG 0.544997 1:+68049686 None:intergenic
TAACGCTATTGCAGAGGCAA+AGG 0.546218 1:-68046749 MsG0180003773.01.T01:intron
CCAGTAAGTTCTCGATACAT+AGG 0.546495 1:+68046412 None:intergenic
TTCCAAGTAGCAAATTAACA+TGG 0.546678 1:+68047700 None:intergenic
CTCCTTCAATATCTATTAGA+GGG 0.550231 1:-68045892 MsG0180003773.01.T01:CDS
CAGCTCCCCGGATAAGAGCC+TGG 0.550472 1:+68049013 None:intergenic
GGATCTTCATCAAATGGACT+AGG 0.550584 1:+68049692 None:intergenic
AAAGGGCAACGATGGCGCTA+TGG 0.556727 1:-68048018 MsG0180003773.01.T01:CDS
GGTAACCAATATGTGAAGAT+GGG 0.559754 1:-68047822 MsG0180003773.01.T01:CDS
ACGCAGCTCTAGGAAATCGC+TGG 0.560123 1:-68042201 MsG0180003773.01.T01:three_prime_UTR
AGGGCCCTGTCTTCAAACCT+GGG 0.564909 1:+68042260 None:intergenic
CGTACTGGAGAATGTGGCTG+GGG 0.566669 1:-68042304 MsG0180003773.01.T01:three_prime_UTR
GAACTGCAGCAGCTACTAGT+GGG 0.574587 1:-68045870 MsG0180003773.01.T01:CDS
GGCTTTCAATGCTAAATCCA+AGG 0.576468 1:-68043285 MsG0180003773.01.T01:CDS
ATGGCGCTATGGATGGAAAA+GGG 0.580044 1:-68048007 MsG0180003773.01.T01:CDS
GAAAGGCAGACCCTCCATCA+AGG 0.592526 1:+68043405 None:intergenic
TCCGCCCAGGTTTGAAGACA+GGG 0.592883 1:-68042264 MsG0180003773.01.T01:three_prime_UTR
ACACACCTTTATATTTGAAG+GGG 0.595045 1:+68047632 None:intergenic
ACGTACTGGAGAATGTGGCT+GGG 0.595637 1:-68042305 MsG0180003773.01.T01:three_prime_UTR
GGAACTGCAGCAGCTACTAG+TGG 0.596282 1:-68045871 MsG0180003773.01.T01:CDS
TCCAAGTAGCAAATTAACAT+GGG 0.601319 1:+68047701 None:intergenic
TTGCAGATAACCTTGATGGA+GGG 0.612711 1:-68043415 MsG0180003773.01.T01:intron
TATGTCCAGTGACTTCATTG+AGG 0.613206 1:-68046320 MsG0180003773.01.T01:CDS
TGGCACGATTATCTCCGCCC+AGG 0.613914 1:-68042277 MsG0180003773.01.T01:three_prime_UTR
CTACAACGTACTGGAGAATG+TGG 0.614153 1:-68042310 MsG0180003773.01.T01:three_prime_UTR
GAACTCCAGGCTCTTATCCG+GGG 0.615768 1:-68049018 MsG0180003773.01.T01:CDS
TTTGCAGATAACCTTGATGG+AGG 0.616351 1:-68043416 MsG0180003773.01.T01:intron
TGTGGCTGCTGCATATCAGA+AGG 0.616687 1:+68041975 None:intergenic
AGAATTGGAAATTCCTTCAG+CGG 0.617192 1:-68042342 MsG0180003773.01.T01:three_prime_UTR
TTGAAATAGCTAGCCAGAGG+AGG 0.621505 1:-68043352 MsG0180003773.01.T01:CDS
TCGGAAAGTACACAGCTCCC+CGG 0.621563 1:+68049001 None:intergenic
TGAAGAGAAAGACGCAGTTG+AGG 0.626108 1:-68045833 MsG0180003773.01.T01:CDS
TAACAGAAAACAAAACCAGA+TGG 0.626611 1:+68041735 None:intergenic
TCAGAGATCTGATTTCATCA+AGG 0.629523 1:-68049043 MsG0180003773.01.T01:CDS
ATGCCATTGATTGCTACACA+AGG 0.631471 1:-68047782 MsG0180003773.01.T01:CDS
CTTGCAACTTAAGGAACAAG+TGG 0.633152 1:-68043259 MsG0180003773.01.T01:CDS
AGTTTCTAACGCTATTGCAG+AGG 0.653391 1:-68046755 MsG0180003773.01.T01:CDS
AATGGACTAGGATCTGGAGA+AGG 0.667911 1:+68049704 None:intergenic
ATTGAAAGCCATGAGCACAA+GGG 0.671992 1:+68043298 None:intergenic
TGCCATTGATTGCTACACAA+GGG 0.679278 1:-68047781 MsG0180003773.01.T01:CDS
AACTGCAGCAGCTACTAGTG+GGG 0.680793 1:-68045869 MsG0180003773.01.T01:CDS
GCCCTGTCTTCAAACCTGGG+CGG 0.681570 1:+68042263 None:intergenic
AAGAGCGTGGACTTTACAGG+AGG 0.683958 1:-68042404 MsG0180003773.01.T01:three_prime_UTR
TGCATATCAGAAGGATACAA+CGG 0.685063 1:+68041984 None:intergenic
CAATTGAAATAGCTAGCCAG+AGG 0.693049 1:-68043355 MsG0180003773.01.T01:CDS
AAGGTGAACCGAAAACATGT+CGG 0.696850 1:+68046285 None:intergenic
GATCTTCTTCGTCACCATCG+TGG 0.698771 1:+68042558 None:intergenic
GATGAAGAAGATGGCCACGA+TGG 0.706895 1:-68042572 MsG0180003773.01.T01:three_prime_UTR
ATTAGTAGGTCAATCAACAG+AGG 0.708264 1:-68041778 MsG0180003773.01.T01:three_prime_UTR
GTACTGGAGAATGTGGCTGG+GGG 0.718923 1:-68042303 MsG0180003773.01.T01:three_prime_UTR
AGGGCCCTTTGATGCCAACG+AGG 0.728345 1:-68042245 MsG0180003773.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTATAAATATTTATGC+CGG + Chr1:68043043-68043062 None:intergenic 10.0%
!!! AATTTTTAATTTGAGTTTAA+TGG - Chr1:68043268-68043287 MsG0180003773.01.T01:CDS 10.0%
!!! ATAGTTTTAATATTACATTT+TGG - Chr1:68045955-68045974 MsG0180003773.01.T01:intron 10.0%
!!! ATATGATAAATTCTAAATTT+TGG - Chr1:68043303-68043322 MsG0180003773.01.T01:CDS 10.0%
!! AAAAAAATAAACAAGATAGT+AGG - Chr1:68048542-68048561 MsG0180003773.01.T01:intron 15.0%
!! AAACATAACAAAACTAAATT+AGG + Chr1:68042077-68042096 None:intergenic 15.0%
!! AAATAAATAAAAATCATCCA+TGG + Chr1:68043242-68043261 None:intergenic 15.0%
!! AAATATTACAATGTGATAAA+TGG + Chr1:68043007-68043026 None:intergenic 15.0%
!! AACAAAACATTTCATATAAA+AGG + Chr1:68045228-68045247 None:intergenic 15.0%
!! GTAATTCCATTAAAATTTAT+TGG - Chr1:68049433-68049452 MsG0180003773.01.T01:intron 15.0%
!! TTAAAATTTATTGGAATACA+TGG - Chr1:68049442-68049461 MsG0180003773.01.T01:intron 15.0%
!!! ATATTTTTTTTTTAAGACAC+CGG - Chr1:68043021-68043040 MsG0180003773.01.T01:intron 15.0%
!!! ATTCAATGTTTTTAAATTCT+TGG - Chr1:68045926-68045945 MsG0180003773.01.T01:CDS 15.0%
!!! CTTGTTTATTTTTTTGTTAA+GGG + Chr1:68048537-68048556 None:intergenic 15.0%
!!! TCTTGTTTATTTTTTTGTTA+AGG + Chr1:68048538-68048557 None:intergenic 15.0%
!!! TGTATTCCAATAAATTTTAA+TGG + Chr1:68049442-68049461 None:intergenic 15.0%
!!! TTCTTTTTTGCTTTATAAAA+AGG + Chr1:68046536-68046555 None:intergenic 15.0%
!!! TTTTTAAAAATCTTTTTCCA+TGG - Chr1:68043222-68043241 MsG0180003773.01.T01:intron 15.0%
!!! TTTTTTTTCTCAAAATGATT+AGG + Chr1:68047877-68047896 None:intergenic 15.0%
!! AAAGAAATCCATTCAAAAAT+TGG + Chr1:68046385-68046404 None:intergenic 20.0%
!! AACTTAGCATTAATAACTAT+GGG + Chr1:68042029-68042048 None:intergenic 20.0%
!! AGATAAATTAAAGAGAAGAA+TGG - Chr1:68046008-68046027 MsG0180003773.01.T01:intron 20.0%
!! ATCAAAATAAACACAATTAC+TGG + Chr1:68049391-68049410 None:intergenic 20.0%
!! ATCCAAAACCATAATAAAAA+TGG + Chr1:68045860-68045879 None:intergenic 20.0%
!! CAAAAATACACAAAAATCAA+AGG + Chr1:68047454-68047473 None:intergenic 20.0%
!! CACAATTTATGTTTAAAGAA+GGG + Chr1:68044997-68045016 None:intergenic 20.0%
!! TAACTTAGCATTAATAACTA+TGG + Chr1:68042030-68042049 None:intergenic 20.0%
!! TAGTAAGTACAAATTCTTAT+CGG + Chr1:68048615-68048634 None:intergenic 20.0%
!! TATAAAAGGATATCATATCA+AGG + Chr1:68045214-68045233 None:intergenic 20.0%
!! TGATGTTTCAATAGTAATAA+TGG - Chr1:68044518-68044537 MsG0180003773.01.T01:intron 20.0%
!! TTAAATACATTCTTTATCGT+TGG + Chr1:68046638-68046657 None:intergenic 20.0%
!!! AAAGATAATTTGTGTTGTTT+TGG - Chr1:68047099-68047118 MsG0180003773.01.T01:intron 20.0%
!!! AAGTCTGTATGTATTTTATT+TGG - Chr1:68049574-68049593 MsG0180003773.01.T01:intron 20.0%
!!! AATAATCTTTTTCAGGAAAA+GGG - Chr1:68043634-68043653 MsG0180003773.01.T01:intron 20.0%
!!! AATTAAGTTGTTTATCGAAA+CGG - Chr1:68044458-68044477 MsG0180003773.01.T01:intron 20.0%
!!! ATACTAGTTTTGTGTATATA+TGG - Chr1:68045260-68045279 MsG0180003773.01.T01:intron 20.0%
!!! ATTGATTCTAACTTAAAGTT+AGG + Chr1:68042829-68042848 None:intergenic 20.0%
!!! GTGTATTTTTGAAATATACA+TGG - Chr1:68047463-68047482 MsG0180003773.01.T01:intron 20.0%
!!! TGATTTTATTAAAAGTGAGT+TGG - Chr1:68042716-68042735 MsG0180003773.01.T01:intron 20.0%
!!! TTAGTTTTGTTATGTTTAGT+TGG - Chr1:68042080-68042099 MsG0180003773.01.T01:intron 20.0%
!!! TTTGAAAACCAATTTTTGAA+TGG - Chr1:68046374-68046393 MsG0180003773.01.T01:CDS 20.0%
!!! TTTGATTTCAGATTTTTACA+AGG - Chr1:68047142-68047161 MsG0180003773.01.T01:intron 20.0%
!!! TTTTATAGCAAATTCAAAGA+TGG - Chr1:68046909-68046928 MsG0180003773.01.T01:CDS 20.0%
! AAAAAGAAAAAAAACTCCCT+TGG - Chr1:68046548-68046567 MsG0180003773.01.T01:intron 25.0%
! AAACAACGTAATAAAATGAG+CGG - Chr1:68048462-68048481 MsG0180003773.01.T01:intron 25.0%
! AAACCAAACACTACATAAAA+GGG - Chr1:68047643-68047662 MsG0180003773.01.T01:CDS 25.0%
! AACTTAAAGTTAGGAGTTAT+AGG + Chr1:68042820-68042839 None:intergenic 25.0%
! AATAAGTTGTTTATCCAAAC+AGG + Chr1:68043884-68043903 None:intergenic 25.0%
! AATGGATCAAAGTAAATGAA+AGG - Chr1:68046712-68046731 MsG0180003773.01.T01:intron 25.0%
! AATGGTAACTGTGATTTATT+AGG - Chr1:68044536-68044555 MsG0180003773.01.T01:intron 25.0%
! AATTATAATGCTAGAATTGG+AGG - Chr1:68047028-68047047 MsG0180003773.01.T01:intron 25.0%
! ACAGTATGAACCATTATATT+AGG + Chr1:68045764-68045783 None:intergenic 25.0%
! ACTGTGTTAAAGTAATAACT+TGG - Chr1:68045779-68045798 MsG0180003773.01.T01:intron 25.0%
! ACTTAGCATTAATAACTATG+GGG + Chr1:68042028-68042047 None:intergenic 25.0%
! ACTTCATTTCCCTAATATAA+TGG - Chr1:68045751-68045770 MsG0180003773.01.T01:intron 25.0%
! AGTACAAAATGTTGTCAAAT+AGG + Chr1:68044840-68044859 None:intergenic 25.0%
! ATAAGTTGTTTATCCAAACA+GGG + Chr1:68043883-68043902 None:intergenic 25.0%
! ATGTTATCCTAAACAATACA+TGG + Chr1:68044190-68044209 None:intergenic 25.0%
! ATTCTATCTTTCCATTGTAT+GGG - Chr1:68048811-68048830 MsG0180003773.01.T01:intron 25.0%
! ATTGTAATTTCATTAGTGGT+TGG - Chr1:68042604-68042623 MsG0180003773.01.T01:three_prime_UTR 25.0%
! ATTTATTGAGTTATACTACG+AGG - Chr1:68045365-68045384 MsG0180003773.01.T01:intron 25.0%
! CACATATGTTTAACAAAATG+AGG - Chr1:68046603-68046622 MsG0180003773.01.T01:intron 25.0%
! CAGTATGAACCATTATATTA+GGG + Chr1:68045763-68045782 None:intergenic 25.0%
! CTCAATTATAATGCTAGAAT+TGG - Chr1:68047025-68047044 MsG0180003773.01.T01:intron 25.0%
! CTGGATAAAAATAGCAAAAA+TGG - Chr1:68049295-68049314 MsG0180003773.01.T01:intron 25.0%
! CTGTGTTAAAGTAATAACTT+GGG - Chr1:68045780-68045799 MsG0180003773.01.T01:intron 25.0%
! CTTAACTAATCTCCATATAT+AGG - Chr1:68048716-68048735 MsG0180003773.01.T01:intron 25.0%
! GCACAATTTATGTTTAAAGA+AGG + Chr1:68044998-68045017 None:intergenic 25.0%
! GTAACTACATAGTTTATTTC+AGG + Chr1:68048265-68048284 None:intergenic 25.0%
! GTACAAAATGTTGTCAAATA+GGG + Chr1:68044839-68044858 None:intergenic 25.0%
! GTTGGATACATTTACATAAA+AGG - Chr1:68042734-68042753 MsG0180003773.01.T01:intron 25.0%
! TAATGCTAAGTTAGATCTAT+AGG - Chr1:68042037-68042056 MsG0180003773.01.T01:three_prime_UTR 25.0%
! TACAAAATGTTGTCAAATAG+GGG + Chr1:68044838-68044857 None:intergenic 25.0%
! TACACACCTTTATATTTGAA+GGG + Chr1:68043849-68043868 None:intergenic 25.0%
! TCATTTACTTTGATCCATTT+CGG + Chr1:68046711-68046730 None:intergenic 25.0%
! TCTTTAAACATAAATTGTGC+AGG - Chr1:68044998-68045017 MsG0180003773.01.T01:intron 25.0%
! TGCATAAATTTCAGAATGAA+AGG + Chr1:68048092-68048111 None:intergenic 25.0%
! TGTAAGGATTGATATCAAAA+CGG + Chr1:68047262-68047281 None:intergenic 25.0%
! TGTCATTGTAATTTCATTAG+TGG - Chr1:68042600-68042619 MsG0180003773.01.T01:three_prime_UTR 25.0%
! TTCAATGATTGTTAAACCTA+TGG + Chr1:68048400-68048419 None:intergenic 25.0%
! TTGGAATACATGGAAAAAAA+AGG - Chr1:68049452-68049471 MsG0180003773.01.T01:intron 25.0%
! TTGTTAAACATATGTGACAA+GGG + Chr1:68046599-68046618 None:intergenic 25.0%
! TTTGTTAAACATATGTGACA+AGG + Chr1:68046600-68046619 None:intergenic 25.0%
!! AAAATACGTTTGATAGCTAA+GGG + Chr1:68045296-68045315 None:intergenic 25.0%
!! ATTTTTGCATTAAAACAGGT+AGG - Chr1:68047712-68047731 MsG0180003773.01.T01:CDS 25.0%
!! CAATTCTTCTTTTTGACAAA+AGG + Chr1:68048585-68048604 None:intergenic 25.0%
!! CATATCACTTCTTTGATAAT+GGG + Chr1:68047929-68047948 None:intergenic 25.0%
!! CTAAAAGTACACAATTTCAA+TGG + Chr1:68045405-68045424 None:intergenic 25.0%
!! GTTTTGTAGAGAAAAACAAA+GGG - Chr1:68049111-68049130 MsG0180003773.01.T01:intron 25.0%
!! TAAAGGTGTGTACTTTATTA+TGG - Chr1:68043857-68043876 MsG0180003773.01.T01:intron 25.0%
!! TCACTATAAATCTTGTCTTT+TGG - Chr1:68047596-68047615 MsG0180003773.01.T01:intron 25.0%
!! TTTCAAAACTATGGATTGAA+GGG + Chr1:68049534-68049553 None:intergenic 25.0%
!! TTTTAATGGAATTACCTGAT+CGG + Chr1:68049428-68049447 None:intergenic 25.0%
!! TTTTGTGAGTGTATTGTTAA+TGG + Chr1:68042963-68042982 None:intergenic 25.0%
!! TTTTTGCATTAAAACAGGTA+GGG - Chr1:68047713-68047732 MsG0180003773.01.T01:CDS 25.0%
!!! AGCCATTTTTATTATGGTTT+TGG - Chr1:68045855-68045874 MsG0180003773.01.T01:CDS 25.0%
!!! ATAAGTTTTGTAAGACCAAT+TGG + Chr1:68044030-68044049 None:intergenic 25.0%
!!! CAATAATCTTTTTCAGGAAA+AGG - Chr1:68043633-68043652 MsG0180003773.01.T01:intron 25.0%
!!! CAATTACTGGTGTTTTTAAA+TGG + Chr1:68049378-68049397 None:intergenic 25.0%
!!! CTTACATAAGCTATTTCTAT+AGG - Chr1:68043917-68043936 MsG0180003773.01.T01:intron 25.0%
!!! GTTTTGGTACATGTATAATT+TGG - Chr1:68047115-68047134 MsG0180003773.01.T01:intron 25.0%
!!! TAAGAGTAGTGTTATTTGAA+TGG - Chr1:68042274-68042293 MsG0180003773.01.T01:three_prime_UTR 25.0%
!!! TAAGTTTTGTAAGACCAATT+GGG + Chr1:68044029-68044048 None:intergenic 25.0%
!!! TCAAATTTCGTTTTTCACTT+GGG - Chr1:68047199-68047218 MsG0180003773.01.T01:intron 25.0%
!!! TTCAAATTTCGTTTTTCACT+TGG - Chr1:68047198-68047217 MsG0180003773.01.T01:intron 25.0%
!!! TTTGAATTTGCTATAAAAGC+TGG + Chr1:68046907-68046926 None:intergenic 25.0%
!!! TTTGACATGGTGATATTTTT+TGG - Chr1:68045432-68045451 MsG0180003773.01.T01:intron 25.0%
!!! TTTTAGTTACTAGTTTGACA+TGG - Chr1:68045419-68045438 MsG0180003773.01.T01:intron 25.0%
!!! TTTTTTGAAAACTCAGTATG+CGG + Chr1:68044401-68044420 None:intergenic 25.0%
AAAATAAGTGACCACTGTAA+TGG + Chr1:68041910-68041929 None:intergenic 30.0%
AAACAACAATGCAAACTTTC+CGG - Chr1:68048033-68048052 MsG0180003773.01.T01:CDS 30.0%
AACATCTTGCAGATATACAT+GGG + Chr1:68048978-68048997 None:intergenic 30.0%
AATTAAGCTGAAATCCCAAT+TGG - Chr1:68044012-68044031 MsG0180003773.01.T01:intron 30.0%
ACAAAAGTAACATCCTTCAT+TGG - Chr1:68045108-68045127 MsG0180003773.01.T01:intron 30.0%
ACACACCTTTATATTTGAAG+GGG + Chr1:68043848-68043867 None:intergenic 30.0%
ACGTAGAAAAACTAAAATGC+AGG - Chr1:68047360-68047379 MsG0180003773.01.T01:intron 30.0%
ACTCCTTCAATATCTATTAG+AGG - Chr1:68045584-68045603 MsG0180003773.01.T01:intron 30.0%
AGAAAAACAAAGGGAAGAAT+TGG - Chr1:68049120-68049139 MsG0180003773.01.T01:intron 30.0%
AGCAAGCAAAAAGAGAAAAA+GGG - Chr1:68043442-68043461 MsG0180003773.01.T01:intron 30.0%
AGCTAAAAAGGCAAATTGTA+AGG + Chr1:68047278-68047297 None:intergenic 30.0%
AGTACAAATTCTTATCGGAT+CGG + Chr1:68048610-68048629 None:intergenic 30.0%
AGTCTTAGAGTTATGACTAT+GGG + Chr1:68046098-68046117 None:intergenic 30.0%
AGTTAGTGAAATCTATGACT+AGG - Chr1:68046063-68046082 MsG0180003773.01.T01:intron 30.0%
ATCAGGTCATAACTTTACTT+CGG + Chr1:68042498-68042517 None:intergenic 30.0%
ATCTCAGGAATGATGAAATT+AGG + Chr1:68046765-68046784 None:intergenic 30.0%
ATGAATCAGTTTCAATCCAA+AGG + Chr1:68048159-68048178 None:intergenic 30.0%
ATGCAATATCAAAGACTACA+CGG + Chr1:68042633-68042652 None:intergenic 30.0%
ATTCATAATACAGAGCTCTA+TGG - Chr1:68048857-68048876 MsG0180003773.01.T01:intron 30.0%
ATTGACTACGACTTATTAGT+AGG - Chr1:68049685-68049704 MsG0180003773.01.T01:intron 30.0%
ATTTACTTTGATCCATTTCG+GGG + Chr1:68046709-68046728 None:intergenic 30.0%
CAAATTCAAAGATGGAAAGT+GGG - Chr1:68046917-68046936 MsG0180003773.01.T01:CDS 30.0%
CATTCTATCTTTCCATTGTA+TGG - Chr1:68048810-68048829 MsG0180003773.01.T01:intron 30.0%
CATTTACTTTGATCCATTTC+GGG + Chr1:68046710-68046729 None:intergenic 30.0%
CCATATCACTTCTTTGATAA+TGG + Chr1:68047930-68047949 None:intergenic 30.0%
CCATTATCAAAGAAGTGATA+TGG - Chr1:68047927-68047946 MsG0180003773.01.T01:CDS 30.0%
CCTGATAAAACAAGGAATAA+GGG + Chr1:68045533-68045552 None:intergenic 30.0%
CGTAGAAAAACTAAAATGCA+GGG - Chr1:68047361-68047380 MsG0180003773.01.T01:intron 30.0%
CTCCTTCAATATCTATTAGA+GGG - Chr1:68045585-68045604 MsG0180003773.01.T01:intron 30.0%
CTGATAAAACAAGGAATAAG+GGG + Chr1:68045532-68045551 None:intergenic 30.0%
GAAACCAAACACTACATAAA+AGG - Chr1:68047642-68047661 MsG0180003773.01.T01:CDS 30.0%
GAAACTCTAAACAGAATCAA+TGG + Chr1:68046833-68046852 None:intergenic 30.0%
GAAATGTCCATGTATTGTTT+AGG - Chr1:68044180-68044199 MsG0180003773.01.T01:intron 30.0%
GGAAACATTGAAAAATCACT+TGG - Chr1:68049661-68049680 MsG0180003773.01.T01:intron 30.0%
GGATGATAAAAGTAGTTCAT+AGG - Chr1:68045876-68045895 MsG0180003773.01.T01:CDS 30.0%
GTAACTAGATTCAAGATTTC+TGG - Chr1:68046989-68047008 MsG0180003773.01.T01:intron 30.0%
GTAAGGATTGATATCAAAAC+GGG + Chr1:68047261-68047280 None:intergenic 30.0%
GTACAACTAAGTTAACTATC+TGG - Chr1:68049623-68049642 MsG0180003773.01.T01:intron 30.0%
GTACACACCTTTATATTTGA+AGG + Chr1:68043850-68043869 None:intergenic 30.0%
GTTAGTGAAATCTATGACTA+GGG - Chr1:68046064-68046083 MsG0180003773.01.T01:intron 30.0%
GTTTCTGCTATAGAAAATAG+AGG - Chr1:68045026-68045045 MsG0180003773.01.T01:intron 30.0%
TAACAGAAAACAAAACCAGA+TGG + Chr1:68049745-68049764 None:intergenic 30.0%
TAACAGAATGTATGTTCATC+AGG - Chr1:68046681-68046700 MsG0180003773.01.T01:intron 30.0%
TACATGAGTGTTCCTATATA+TGG + Chr1:68048731-68048750 None:intergenic 30.0%
TATGAAGCTACAAATTCAAG+AGG + Chr1:68047573-68047592 None:intergenic 30.0%
TCCAAGTAGCAAATTAACAT+GGG + Chr1:68043779-68043798 None:intergenic 30.0%
TGTTAAAGTAATAACTTGGG+CGG - Chr1:68045783-68045802 MsG0180003773.01.T01:intron 30.0%
TTAAACTTATGATGTGCCAA+GGG + Chr1:68046567-68046586 None:intergenic 30.0%
TTCCAAGTAGCAAATTAACA+TGG + Chr1:68043780-68043799 None:intergenic 30.0%
TTCCCTCTAATAGATATTGA+AGG + Chr1:68045590-68045609 None:intergenic 30.0%
TTCTTCAATTCCTCATTCTT+GGG + Chr1:68044648-68044667 None:intergenic 30.0%
TTGGATAAAGAGAGCTAAAA+AGG + Chr1:68047290-68047309 None:intergenic 30.0%
! AAACCAGTGTTGTTAAATAG+AGG + Chr1:68044932-68044951 None:intergenic 30.0%
! AACAAAAGTATGTCTTCTAG+TGG + Chr1:68046806-68046825 None:intergenic 30.0%
! AGAACAAGAATTTTCTGATG+CGG + Chr1:68048954-68048973 None:intergenic 30.0%
! ATGGAAAAAAAAGGTGTAAG+CGG - Chr1:68049461-68049480 MsG0180003773.01.T01:intron 30.0%
! CACACTCAATAATCTTTTTC+AGG - Chr1:68043627-68043646 MsG0180003773.01.T01:intron 30.0%
! CATGAAGATAAAAGCATACT+CGG + Chr1:68041809-68041828 None:intergenic 30.0%
! CGTGATTTTTGCATTAAAAC+AGG - Chr1:68047708-68047727 MsG0180003773.01.T01:CDS 30.0%
! CTTCTTTTTGACAAAAGGAT+CGG + Chr1:68048580-68048599 None:intergenic 30.0%
! CTTTCAAAACTATGGATTGA+AGG + Chr1:68049535-68049554 None:intergenic 30.0%
! CTTTGAACTGTTTTCTTTAG+TGG - Chr1:68044759-68044778 MsG0180003773.01.T01:intron 30.0%
! GAAAATACGTTTGATAGCTA+AGG + Chr1:68045297-68045316 None:intergenic 30.0%
! GCATATTTTGTGTCAAATGT+TGG - Chr1:68045472-68045491 MsG0180003773.01.T01:intron 30.0%
! TATATGAAAACATGTCGACT+AGG - Chr1:68044229-68044248 MsG0180003773.01.T01:intron 30.0%
! TCAGATTTTTACAAGGTTAC+AGG - Chr1:68047149-68047168 MsG0180003773.01.T01:intron 30.0%
! TCATAGTATGACAGTGATTT+TGG - Chr1:68042566-68042585 MsG0180003773.01.T01:three_prime_UTR 30.0%
! TTCTCATGTAACTTGTAATG+TGG - Chr1:68044951-68044970 MsG0180003773.01.T01:intron 30.0%
! TTTGGCAAAATCGTTCATTT+TGG - Chr1:68045450-68045469 MsG0180003773.01.T01:intron 30.0%
!! AAGTTTTTCAATGCAGCTTA+TGG + Chr1:68042926-68042945 None:intergenic 30.0%
!! GCAGCTTATGTTTTTATGTT+TGG + Chr1:68042884-68042903 None:intergenic 30.0%
!! GCTACTTGGAAATTTTAGAA+GGG - Chr1:68043789-68043808 MsG0180003773.01.T01:intron 30.0%
!! GGTTTTGTAGAGAAAAACAA+AGG - Chr1:68049110-68049129 MsG0180003773.01.T01:intron 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG - Chr1:68043978-68043997 MsG0180003773.01.T01:intron 30.0%
!! TGCTACTTGGAAATTTTAGA+AGG - Chr1:68043788-68043807 MsG0180003773.01.T01:intron 30.0%
!!! ATAGCGAGCCATTTTTATTA+TGG - Chr1:68045849-68045868 MsG0180003773.01.T01:CDS 30.0%
!!! ATGTTACTTTTGTCTAACAC+AGG + Chr1:68045101-68045120 None:intergenic 30.0%
!!! TAGTCCATACTGGTTTTAAA+TGG - Chr1:68044322-68044341 MsG0180003773.01.T01:intron 30.0%
AAGGAGAAATCTAGTGAAAG+AGG + Chr1:68046517-68046536 None:intergenic 35.0%
AAGGGTGAGAAACAAATCAA+AGG - Chr1:68047661-68047680 MsG0180003773.01.T01:CDS 35.0%
AATAACTGTGTACGATGAAG+TGG + Chr1:68043348-68043367 None:intergenic 35.0%
AATCTTACCTTCCATTAGTG+GGG + Chr1:68044350-68044369 None:intergenic 35.0%
ACAAGAAGCAAACAAACACA+TGG + Chr1:68044486-68044505 None:intergenic 35.0%
ACAATGAGGAAAACACCTAT+TGG - Chr1:68045817-68045836 MsG0180003773.01.T01:CDS 35.0%
ACTATTGAAACATCAGACCA+AGG + Chr1:68044513-68044532 None:intergenic 35.0%
ACTGGAGAATGAAAAACATG+AGG - Chr1:68044695-68044714 MsG0180003773.01.T01:intron 35.0%
AGAATTGGAAATTCCTTCAG+CGG - Chr1:68049135-68049154 MsG0180003773.01.T01:intron 35.0%
AGCACAAGACTATTGTCAAA+TGG - Chr1:68044608-68044627 MsG0180003773.01.T01:intron 35.0%
AGCTCTGTATTATGAATCAG+AGG + Chr1:68048854-68048873 None:intergenic 35.0%
AGGGTGAGAAACAAATCAAA+GGG - Chr1:68047662-68047681 MsG0180003773.01.T01:CDS 35.0%
ATAACTGTGTACGATGAAGT+GGG + Chr1:68043347-68043366 None:intergenic 35.0%
ATACTCGGATCTTCATCAAA+TGG + Chr1:68041794-68041813 None:intergenic 35.0%
ATCCAACGAATTCAACGAAA+AGG + Chr1:68044586-68044605 None:intergenic 35.0%
ATGAAATTACAATGACACCG+TGG + Chr1:68042597-68042616 None:intergenic 35.0%
ATTAAGCACTAGCGAAAAGA+CGG + Chr1:68048498-68048517 None:intergenic 35.0%
ATTAGTAGGTCAATCAACAG+AGG - Chr1:68049699-68049718 MsG0180003773.01.T01:CDS 35.0%
ATTCAACGAAAAGGAAGCTT+TGG + Chr1:68044577-68044596 None:intergenic 35.0%
ATTGCATTTGAGTGTGTGTT+TGG - Chr1:68042646-68042665 MsG0180003773.01.T01:intron 35.0%
ATTTGAATGGAATCTCTTGC+TGG - Chr1:68042287-68042306 MsG0180003773.01.T01:three_prime_UTR 35.0%
CAATCTTACCTTCCATTAGT+GGG + Chr1:68044351-68044370 None:intergenic 35.0%
CAGTCTTAGAGTTATGACTA+TGG + Chr1:68046099-68046118 None:intergenic 35.0%
CATTTGATCCGATTAGCAAA+AGG + Chr1:68047959-68047978 None:intergenic 35.0%
CCACTAGATAAAGCTCAAAT+AGG - Chr1:68044051-68044070 MsG0180003773.01.T01:intron 35.0%
CGCTATAAATCATCACCAAT+AGG + Chr1:68045835-68045854 None:intergenic 35.0%
CTAACCTGCAAAACAAACAT+GGG + Chr1:68049038-68049057 None:intergenic 35.0%
CTATGTATCGAGAACTTACT+GGG - Chr1:68045066-68045085 MsG0180003773.01.T01:intron 35.0%
CTTCTTCAATTCCTCATTCT+TGG + Chr1:68044649-68044668 None:intergenic 35.0%
CTTTCCCAAAATATGACTCT+TGG - Chr1:68046284-68046303 MsG0180003773.01.T01:intron 35.0%
GAAAATAGAGGCTTGAAGAT+TGG - Chr1:68045038-68045057 MsG0180003773.01.T01:intron 35.0%
GAACATCTTGCAGATATACA+TGG + Chr1:68048979-68048998 None:intergenic 35.0%
GAGCAAGCAAAAAGAGAAAA+AGG - Chr1:68043441-68043460 MsG0180003773.01.T01:intron 35.0%
GCAAATTCAAAGATGGAAAG+TGG - Chr1:68046916-68046935 MsG0180003773.01.T01:CDS 35.0%
GCACAAGACTATTGTCAAAT+GGG - Chr1:68044609-68044628 MsG0180003773.01.T01:intron 35.0%
GCAGATTGAAACTAAGATAC+TGG - Chr1:68044677-68044696 MsG0180003773.01.T01:intron 35.0%
GCCTGATAAAACAAGGAATA+AGG + Chr1:68045534-68045553 None:intergenic 35.0%
GGTAACCAATATGTGAAGAT+GGG - Chr1:68043655-68043674 MsG0180003773.01.T01:intron 35.0%
GTGTTTGTATGGAAGATCAT+TGG + Chr1:68046161-68046180 None:intergenic 35.0%
GTTAAACTTATGATGTGCCA+AGG + Chr1:68046568-68046587 None:intergenic 35.0%
GTTCATATAACACATCTCGT+TGG - Chr1:68047513-68047532 MsG0180003773.01.T01:intron 35.0%
GTTGTCCCCTTCAAATATAA+AGG - Chr1:68043840-68043859 MsG0180003773.01.T01:intron 35.0%
GTTTGCTTCTTGTAATTCCT+TGG - Chr1:68044493-68044512 MsG0180003773.01.T01:intron 35.0%
TAAGTTCTTGTACCAAACAG+TGG + Chr1:68046350-68046369 None:intergenic 35.0%
TACTTTATTATGGCCCTGTT+TGG - Chr1:68043867-68043886 MsG0180003773.01.T01:intron 35.0%
TAGAATGCATAATGCTCTCT+AGG + Chr1:68048797-68048816 None:intergenic 35.0%
TAGTGAAGTCTTTGCTTCTA+GGG - Chr1:68042106-68042125 MsG0180003773.01.T01:intron 35.0%
TATCAAAACGGGAACTAGAA+TGG + Chr1:68047250-68047269 None:intergenic 35.0%
TATTATGAATCAGAGGATGC+CGG + Chr1:68048847-68048866 None:intergenic 35.0%
TCAGAGATCTGATTTCATCA+AGG - Chr1:68042434-68042453 MsG0180003773.01.T01:intron 35.0%
TCTAACCTGCAAAACAAACA+TGG + Chr1:68049039-68049058 None:intergenic 35.0%
TCTCGTTGGAAAAATAGTCA+TGG - Chr1:68047527-68047546 MsG0180003773.01.T01:intron 35.0%
TCTGCATACAAAAGAAGAAC+AGG + Chr1:68045134-68045153 None:intergenic 35.0%
TCTTACCCATCTTCACATAT+TGG + Chr1:68043663-68043682 None:intergenic 35.0%
TGCATATCAGAAGGATACAA+CGG + Chr1:68049496-68049515 None:intergenic 35.0%
TTCAAAGGTCTCAAACTCAT+CGG - Chr1:68047844-68047863 MsG0180003773.01.T01:intron 35.0%
TTCAGTACTTCTACTTCCAA+GGG - Chr1:68042343-68042362 MsG0180003773.01.T01:three_prime_UTR 35.0%
TTGGAAAAATAGTCATGGCA+AGG - Chr1:68047532-68047551 MsG0180003773.01.T01:intron 35.0%
TTGTCAAATGGGTCTTCATT+TGG - Chr1:68044620-68044639 MsG0180003773.01.T01:intron 35.0%
TTTCAGTACTTCTACTTCCA+AGG - Chr1:68042342-68042361 MsG0180003773.01.T01:three_prime_UTR 35.0%
! ACCTCCAAGAGTCATATTTT+GGG + Chr1:68046291-68046310 None:intergenic 35.0%
! AGATTCTTTGATAGCAGCAA+TGG + Chr1:68043537-68043556 None:intergenic 35.0%
! AGTTTTTGCTTAGATAGACG+AGG + Chr1:68045567-68045586 None:intergenic 35.0%
! CCTATTTGAGCTTTATCTAG+TGG + Chr1:68044054-68044073 None:intergenic 35.0%
! CGAGTATGCTTTTATCTTCA+TGG - Chr1:68041807-68041826 MsG0180003773.01.T01:three_prime_UTR 35.0%
! GAAGGTACATTCAGTTCAAA+TGG + Chr1:68041758-68041777 None:intergenic 35.0%
! GTATGCTTTTATCTTCATGG+TGG - Chr1:68041810-68041829 MsG0180003773.01.T01:three_prime_UTR 35.0%
! GTTTTGCAGGTTAGAGTTTT+GGG - Chr1:68049044-68049063 MsG0180003773.01.T01:CDS 35.0%
! TCACCCTTTTATGTAGTGTT+TGG + Chr1:68047649-68047668 None:intergenic 35.0%
! TGGAAAAAAAAGGTGTAAGC+GGG - Chr1:68049462-68049481 MsG0180003773.01.T01:intron 35.0%
! TGTTTTGCAGGTTAGAGTTT+TGG - Chr1:68049043-68049062 MsG0180003773.01.T01:CDS 35.0%
! TTCCTTTTCGTTGAATTCGT+TGG - Chr1:68044581-68044600 MsG0180003773.01.T01:intron 35.0%
! TTTTCAACATCCCATGAAAG+CGG + Chr1:68045330-68045349 None:intergenic 35.0%
!! ATCACTTCTTTGATAATGGG+AGG + Chr1:68047926-68047945 None:intergenic 35.0%
!! ATCTGGATGCTTTAAAATGC+AGG - Chr1:68049640-68049659 MsG0180003773.01.T01:intron 35.0%
!! ATCTTCAGCTTTAGAACTCA+AGG - Chr1:68043553-68043572 MsG0180003773.01.T01:intron 35.0%
!! CAAGAGTCATATTTTGGGAA+AGG + Chr1:68046286-68046305 None:intergenic 35.0%
!! CAGTGATTTTGGTAAAACCA+CGG - Chr1:68042577-68042596 MsG0180003773.01.T01:three_prime_UTR 35.0%
!! GTCACTGACTTTCAAAACTA+TGG + Chr1:68049543-68049562 None:intergenic 35.0%
!! GTGTGGCAAGTTTCATTTTT+AGG - Chr1:68041956-68041975 MsG0180003773.01.T01:three_prime_UTR 35.0%
!! GTTGAGAGCAGTTTTGATAA+TGG - Chr1:68046128-68046147 MsG0180003773.01.T01:intron 35.0%
!! TTTTGGGAATTAAAAGAGCG+TGG - Chr1:68049060-68049079 MsG0180003773.01.T01:CDS 35.0%
!!! CAGTGGTCACTTATTTTTAG+TGG - Chr1:68041913-68041932 MsG0180003773.01.T01:intron 35.0%
!!! CCCTTATTCCTTGTTTTATC+AGG - Chr1:68045530-68045549 MsG0180003773.01.T01:intron 35.0%
!!! GGGGATGGTTTTAAAATGTT+AGG + Chr1:68046472-68046491 None:intergenic 35.0%
!!! TATTCCCATGTTTGTTTTGC+AGG - Chr1:68049031-68049050 MsG0180003773.01.T01:CDS 35.0%
!!! TATTCCTTGTTTTATCAGGC+TGG - Chr1:68045534-68045553 MsG0180003773.01.T01:intron 35.0%
!!! TATTTTGATATGCAGCTTCC+AGG - Chr1:68049402-68049421 MsG0180003773.01.T01:intron 35.0%
AAAACAAGGAATAAGGGGTG+AGG + Chr1:68045527-68045546 None:intergenic 40.0%
AAAGAAGAACAGGCCAATGA+AGG + Chr1:68045124-68045143 None:intergenic 40.0%
AAAGAGAAAAAGGGCAACGA+TGG - Chr1:68043451-68043470 MsG0180003773.01.T01:intron 40.0%
AACCTTAAACGCAGTTTCGT+TGG + Chr1:68043375-68043394 None:intergenic 40.0%
AAGGTGAACCGAAAACATGT+CGG + Chr1:68045195-68045214 None:intergenic 40.0%
AAGTAATAACTTGGGCGGTA+AGG - Chr1:68045788-68045807 MsG0180003773.01.T01:intron 40.0%
ACCACAAACTGATGTTGAAG+AGG + Chr1:68048002-68048021 None:intergenic 40.0%
ACCTCTTCAACATCAGTTTG+TGG - Chr1:68047998-68048017 MsG0180003773.01.T01:CDS 40.0%
ACTAAAAGGCGAGTAGTATC+AGG + Chr1:68042515-68042534 None:intergenic 40.0%
AGAACCAGCCTGATAAAACA+AGG + Chr1:68045541-68045560 None:intergenic 40.0%
AGAATAGATACATCCATGCG+AGG + Chr1:68047056-68047075 None:intergenic 40.0%
AGTGGAAAACCATTTCACCT+GGG + Chr1:68046788-68046807 None:intergenic 40.0%
AGTTTCTAACGCTATTGCAG+AGG - Chr1:68044722-68044741 MsG0180003773.01.T01:intron 40.0%
ATCAAAACTGCTCTCAACCT+AGG + Chr1:68046126-68046145 None:intergenic 40.0%
ATCAAGCCTGTTTGTCTTTC+AGG - Chr1:68042381-68042400 MsG0180003773.01.T01:three_prime_UTR 40.0%
ATCCCTTCACAGATTGTCTA+TGG - Chr1:68046214-68046233 MsG0180003773.01.T01:intron 40.0%
ATCGAGAACTTACTGGGTTA+AGG - Chr1:68045072-68045091 MsG0180003773.01.T01:intron 40.0%
ATCTTACCTTCCATTAGTGG+GGG + Chr1:68044349-68044368 None:intergenic 40.0%
ATTATGAATCAGAGGATGCC+GGG + Chr1:68048846-68048865 None:intergenic 40.0%
ATTGAAAGCCATGAGCACAA+GGG + Chr1:68048182-68048201 None:intergenic 40.0%
ATTTGCCTAGCTTAGCATGA+TGG + Chr1:68046493-68046512 None:intergenic 40.0%
CAATTGAAATAGCTAGCCAG+AGG - Chr1:68048122-68048141 MsG0180003773.01.T01:intron 40.0%
CACCATAGACAATCTGTGAA+GGG + Chr1:68046219-68046238 None:intergenic 40.0%
CCAATCTTACCTTCCATTAG+TGG + Chr1:68044352-68044371 None:intergenic 40.0%
CCACTAATGGAAGGTAAGAT+TGG - Chr1:68044349-68044368 MsG0180003773.01.T01:intron 40.0%
CCAGATTCTGATGAAGAAGA+TGG - Chr1:68048896-68048915 MsG0180003773.01.T01:intron 40.0%
CCAGTAAGTTCTCGATACAT+AGG + Chr1:68045068-68045087 None:intergenic 40.0%
CCATCTTCTTCATCAGAATC+TGG + Chr1:68048899-68048918 None:intergenic 40.0%
CCTATGTATCGAGAACTTAC+TGG - Chr1:68045065-68045084 MsG0180003773.01.T01:intron 40.0%
CGATCCAAATACGCACTAAA+AGG + Chr1:68042529-68042548 None:intergenic 40.0%
CGGATCAAATGTAACACAGA+TGG - Chr1:68047968-68047987 MsG0180003773.01.T01:CDS 40.0%
CGGTAAGGATATAGACAATG+AGG - Chr1:68045803-68045822 MsG0180003773.01.T01:intron 40.0%
CTCACAAGTGTTTATGACAG+TGG + Chr1:68044139-68044158 None:intergenic 40.0%
CTTGCAACTTAAGGAACAAG+TGG - Chr1:68048218-68048237 MsG0180003773.01.T01:intron 40.0%
GAAATCCTCAATGAAGTCAC+TGG + Chr1:68045165-68045184 None:intergenic 40.0%
GAAGCTACAAATTCAAGAGG+CGG + Chr1:68047570-68047589 None:intergenic 40.0%
GAATTGGAAATTCCTTCAGC+GGG - Chr1:68049136-68049155 MsG0180003773.01.T01:intron 40.0%
GGCTTTCAATGCTAAATCCA+AGG - Chr1:68048192-68048211 MsG0180003773.01.T01:intron 40.0%
GGGTAACCAATATGTGAAGA+TGG - Chr1:68043654-68043673 MsG0180003773.01.T01:intron 40.0%
GTAGTGAAGTCTTTGCTTCT+AGG - Chr1:68042105-68042124 MsG0180003773.01.T01:intron 40.0%
GTGCCTCTATTTAACAACAC+TGG - Chr1:68044926-68044945 MsG0180003773.01.T01:intron 40.0%
GTTGCTTCCTTTCATACACT+TGG + Chr1:68046948-68046967 None:intergenic 40.0%
TAGGCTCTTTCAGAACATCA+TGG + Chr1:68046746-68046765 None:intergenic 40.0%
TAGTGGAAAACCATTTCACC+TGG + Chr1:68046789-68046808 None:intergenic 40.0%
TATGTCCAGTGACTTCATTG+AGG - Chr1:68045157-68045176 MsG0180003773.01.T01:intron 40.0%
TCAAAACTGCTCTCAACCTA+GGG + Chr1:68046125-68046144 None:intergenic 40.0%
TCATTTGGATCCCAAGAATG+AGG - Chr1:68044635-68044654 MsG0180003773.01.T01:intron 40.0%
TCCCAAAATATGACTCTTGG+AGG - Chr1:68046287-68046306 MsG0180003773.01.T01:intron 40.0%
TCTATATCGCTGAGCAATAG+CGG - Chr1:68044870-68044889 MsG0180003773.01.T01:intron 40.0%
TCTTCAACATCAGTTTGTGG+TGG - Chr1:68048001-68048020 MsG0180003773.01.T01:CDS 40.0%
TGATCCGATTAGCAAAAGGA+GGG + Chr1:68047955-68047974 None:intergenic 40.0%
TGATTGAAGAGCCATTGCAA+TGG + Chr1:68047780-68047799 None:intergenic 40.0%
TGCAATTAGAACTAAGCCCT+TGG + Chr1:68042362-68042381 None:intergenic 40.0%
TGCTTTGCAGATAACCTTGA+TGG - Chr1:68048058-68048077 MsG0180003773.01.T01:intron 40.0%
TTAGTGCGTATTTGGATCGA+CGG - Chr1:68042530-68042549 MsG0180003773.01.T01:three_prime_UTR 40.0%
TTCCAACGAAACTGCGTTTA+AGG - Chr1:68043370-68043389 MsG0180003773.01.T01:CDS 40.0%
TTCTTGTACCAAACAGTGGT+TGG + Chr1:68046346-68046365 None:intergenic 40.0%
TTGATCCGATTAGCAAAAGG+AGG + Chr1:68047956-68047975 None:intergenic 40.0%
TTGCAGATAACCTTGATGGA+GGG - Chr1:68048062-68048081 MsG0180003773.01.T01:intron 40.0%
TTGTCAAATAGGGGCTATAG+AGG + Chr1:68044829-68044848 None:intergenic 40.0%
TTTAAATGGTCCCCCACTAA+TGG - Chr1:68044336-68044355 MsG0180003773.01.T01:intron 40.0%
TTTGCAGATAACCTTGATGG+AGG - Chr1:68048061-68048080 MsG0180003773.01.T01:intron 40.0%
TTTGCCTAGCTTAGCATGAT+GGG + Chr1:68046492-68046511 None:intergenic 40.0%
! AAGGTCTGCTTTCTCGTTTT+CGG + Chr1:68043510-68043529 None:intergenic 40.0%
! ATGCCATTGATTGCTACACA+AGG - Chr1:68043695-68043714 MsG0180003773.01.T01:intron 40.0%
! ATTGGTCTCCTCGGATTATT+CGG - Chr1:68044367-68044386 MsG0180003773.01.T01:intron 40.0%
! CACTTGTTCCTTAAGTTGCA+AGG + Chr1:68048220-68048239 None:intergenic 40.0%
! CTTTTGGCGCAAGATTTACA+AGG - Chr1:68047612-68047631 MsG0180003773.01.T01:intron 40.0%
! GACCTCCAAGAGTCATATTT+TGG + Chr1:68046292-68046311 None:intergenic 40.0%
! GCAGATAAGTTAGCTTCCAT+AGG - Chr1:68048381-68048400 MsG0180003773.01.T01:intron 40.0%
! GCTTTCTCGTTTTCGGTTAA+AGG + Chr1:68043503-68043522 None:intergenic 40.0%
! GGATCTTCATCAAATGGACT+AGG + Chr1:68041788-68041807 None:intergenic 40.0%
! GGGACCATTTAAAACCAGTA+TGG + Chr1:68044329-68044348 None:intergenic 40.0%
! GTAACTTGTAATGTGGAGAC+TGG - Chr1:68044958-68044977 MsG0180003773.01.T01:intron 40.0%
! GTTAGAGTGTTTGAGAAGCT+TGG - Chr1:68048669-68048688 MsG0180003773.01.T01:intron 40.0%
! GTTCTGGGTTGTGTATCTTA+TGG - Chr1:68042409-68042428 MsG0180003773.01.T01:three_prime_UTR 40.0%
! TAAAAGAGCGTGGACTTTAC+AGG - Chr1:68049070-68049089 MsG0180003773.01.T01:CDS 40.0%
! TAATGGATGTGAAGGTCAGA+AGG - Chr1:68042129-68042148 MsG0180003773.01.T01:intron 40.0%
! TAGTACACGTAGAGCTTGTT+TGG + Chr1:68044082-68044101 None:intergenic 40.0%
! TGATAGCTAAGGGTGTAACA+CGG + Chr1:68045286-68045305 None:intergenic 40.0%
! TGCCATTGATTGCTACACAA+GGG - Chr1:68043696-68043715 MsG0180003773.01.T01:intron 40.0%
!! AGTCTTTGCTTCTAGGGTAA+TGG - Chr1:68042112-68042131 MsG0180003773.01.T01:intron 40.0%
!! GCCCATGTTAATTTGCTACT+TGG - Chr1:68043775-68043794 MsG0180003773.01.T01:intron 40.0%
!! TCATCAAATGGACTAGGATC+TGG + Chr1:68041782-68041801 None:intergenic 40.0%
!! TCTTGTGACTGAGTTTTGTG+TGG - Chr1:68041939-68041958 MsG0180003773.01.T01:intron 40.0%
!! TCTTTGATAATGGGAGGCTT+TGG + Chr1:68047920-68047939 None:intergenic 40.0%
!! TTCTAGGGTAATGGATGTGA+AGG - Chr1:68042121-68042140 MsG0180003773.01.T01:intron 40.0%
!! TTGTTTTATCAGGCTGGTTC+TGG - Chr1:68045540-68045559 MsG0180003773.01.T01:intron 40.0%
!!! GAGAGCAGTTTTGATAATGG+CGG - Chr1:68046131-68046150 MsG0180003773.01.T01:intron 40.0%
!!! TGAGTGTGTGTTTGGTTTTG+CGG - Chr1:68042654-68042673 MsG0180003773.01.T01:intron 40.0%
AAGCCAAGTGCAGTCTTCAA+TGG - Chr1:68041852-68041871 MsG0180003773.01.T01:intron 45.0%
ACAGATCAGTGTTTCCTCGT+TGG + Chr1:68049249-68049268 None:intergenic 45.0%
AGGTTATCTGCAAAGCATGC+CGG + Chr1:68048055-68048074 None:intergenic 45.0%
ATGCTCTGCATCCATTGCAA+TGG - Chr1:68047766-68047785 MsG0180003773.01.T01:CDS 45.0%
ATGGCGCTATGGATGGAAAA+GGG - Chr1:68043470-68043489 MsG0180003773.01.T01:intron 45.0%
CAAAACTGCTCTCAACCTAG+GGG + Chr1:68046124-68046143 None:intergenic 45.0%
CAAAAGATCTGTCACTGCGA+AGG - Chr1:68046244-68046263 MsG0180003773.01.T01:intron 45.0%
CACATTCTCCAGTACGTTGT+AGG + Chr1:68049169-68049188 None:intergenic 45.0%
CAGGAGGACAATCTGTTGAA+AGG - Chr1:68049089-68049108 MsG0180003773.01.T01:intron 45.0%
CATTGAAAGCCATGAGCACA+AGG + Chr1:68048183-68048202 None:intergenic 45.0%
CCACCATAGACAATCTGTGA+AGG + Chr1:68046220-68046239 None:intergenic 45.0%
CCTCGGATTATTCGGTCTTT+GGG - Chr1:68044375-68044394 MsG0180003773.01.T01:intron 45.0%
CCTTCACAGATTGTCTATGG+TGG - Chr1:68046217-68046236 MsG0180003773.01.T01:intron 45.0%
CTACAACGTACTGGAGAATG+TGG - Chr1:68049167-68049186 MsG0180003773.01.T01:intron 45.0%
CTTCCATTGAAGACTGCACT+TGG + Chr1:68041858-68041877 None:intergenic 45.0%
CTTGGACTGCGCTTCTATAA+AGG - Chr1:68044260-68044279 MsG0180003773.01.T01:intron 45.0%
GATGAAGTGGGTCTTTGGTT+TGG + Chr1:68043335-68043354 None:intergenic 45.0%
GCTACTAGTGGGGAAGTTAT+TGG - Chr1:68045618-68045637 MsG0180003773.01.T01:intron 45.0%
GCTTCCTTTCATACACTTGG+AGG + Chr1:68046945-68046964 None:intergenic 45.0%
GGTATCAAGGTCCCATACAA+TGG + Chr1:68048825-68048844 None:intergenic 45.0%
GTGCTCAGACTTGTGTATAG+TGG - Chr1:68041877-68041896 MsG0180003773.01.T01:intron 45.0%
GTTTCCTCGTTGGCATCAAA+GGG + Chr1:68049239-68049258 None:intergenic 45.0%
TAACGCTATTGCAGAGGCAA+AGG - Chr1:68044728-68044747 MsG0180003773.01.T01:intron 45.0%
TAGCCCACAGAAATTGGTAC+CGG + Chr1:68044304-68044323 None:intergenic 45.0%
TCCATACAAACACGCCATTG+CGG - Chr1:68046168-68046187 MsG0180003773.01.T01:intron 45.0%
TCCTCGGATTATTCGGTCTT+TGG - Chr1:68044374-68044393 MsG0180003773.01.T01:intron 45.0%
TGAAGAGAAAGACGCAGTTG+AGG - Chr1:68045644-68045663 MsG0180003773.01.T01:intron 45.0%
TGATAGCAGCAATGGCTTCA+AGG + Chr1:68043529-68043548 None:intergenic 45.0%
TGATTCATCCCTTGTGCTCA+TGG - Chr1:68048171-68048190 MsG0180003773.01.T01:intron 45.0%
TGCCCTTGTGTAGCAATCAA+TGG + Chr1:68043701-68043720 None:intergenic 45.0%
TGCGCTTCTATAAAGGTCTC+AGG - Chr1:68044267-68044286 MsG0180003773.01.T01:intron 45.0%
TGTAAACAACACGCAGCTCT+AGG - Chr1:68049266-68049285 MsG0180003773.01.T01:intron 45.0%
TGTAATCCGCACGTTTAGTG+TGG + Chr1:68047823-68047842 None:intergenic 45.0%
TGTACGATGAAGTGGGTCTT+TGG + Chr1:68043340-68043359 None:intergenic 45.0%
TGTTTCCTCGTTGGCATCAA+AGG + Chr1:68049240-68049259 None:intergenic 45.0%
TTCATCATTCCTGAGATCCC+AGG - Chr1:68046768-68046787 MsG0180003773.01.T01:CDS 45.0%
TTCTCAGAGTTGTGCTGCAT+TGG + Chr1:68047309-68047328 None:intergenic 45.0%
TTGAAATAGCTAGCCAGAGG+AGG - Chr1:68048125-68048144 MsG0180003773.01.T01:intron 45.0%
TTGCCTAGCTTAGCATGATG+GGG + Chr1:68046491-68046510 None:intergenic 45.0%
TTGTATGGGACCTTGATACC+CGG - Chr1:68048825-68048844 MsG0180003773.01.T01:intron 45.0%
TTTCATCAAGGTCGAACTCC+AGG - Chr1:68042446-68042465 MsG0180003773.01.T01:intron 45.0%
! ACGTGCGGATTACACTTCAA+AGG - Chr1:68047829-68047848 MsG0180003773.01.T01:CDS 45.0%
! AGAAGATCAGCCGCTTTCAT+GGG - Chr1:68045317-68045336 MsG0180003773.01.T01:intron 45.0%
! CACGTAGAGCTTGTTTGGAT+TGG + Chr1:68044077-68044096 None:intergenic 45.0%
! CTCGCCTTTTAGTGCGTATT+TGG - Chr1:68042522-68042541 MsG0180003773.01.T01:three_prime_UTR 45.0%
! CTTTATAGAAGCGCAGTCCA+AGG + Chr1:68044262-68044281 None:intergenic 45.0%
!! AACTCTAAGACTGATCCCCT+AGG - Chr1:68046106-68046125 MsG0180003773.01.T01:intron 45.0%
!! AATGGACTAGGATCTGGAGA+AGG + Chr1:68041776-68041795 None:intergenic 45.0%
!! ATGGACTAGCCCACAGAAAT+TGG + Chr1:68044310-68044329 None:intergenic 45.0%
!! GAAGGTAAGATTGGTCTCCT+CGG - Chr1:68044358-68044377 MsG0180003773.01.T01:intron 45.0%
!! TTGATAATGGGAGGCTTTGG+AGG + Chr1:68047917-68047936 None:intergenic 45.0%
!!! GCAGTTTTGATAATGGCGGA+AGG - Chr1:68046135-68046154 MsG0180003773.01.T01:intron 45.0%
!! AAAAAGAAAATATTTATAAA+CGG + Chr1:68043129-68043148 None:intergenic 5.0%
!! TAATTTATCTTAAATTTAAA+AGG + Chr1:68045998-68046017 None:intergenic 5.0%
AAAGGTTTCTCCACCTCCTC+TGG + Chr1:68048141-68048160 None:intergenic 50.0%
AAATAGCTAGCCAGAGGAGG+TGG - Chr1:68048128-68048147 MsG0180003773.01.T01:intron 50.0%
AACGTACTGGAGAATGTGGC+TGG - Chr1:68049171-68049190 MsG0180003773.01.T01:intron 50.0%
AACTGCAGCAGCTACTAGTG+GGG - Chr1:68045608-68045627 MsG0180003773.01.T01:intron 50.0%
AAGATCTGTCACTGCGAAGG+TGG - Chr1:68046247-68046266 MsG0180003773.01.T01:intron 50.0%
AATGGTCCCCCACTAATGGA+AGG - Chr1:68044340-68044359 MsG0180003773.01.T01:intron 50.0%
ACAAGGAATAAGGGGTGAGG+TGG + Chr1:68045524-68045543 None:intergenic 50.0%
ACAGTGGAATAGTGGTTGGC+CGG + Chr1:68046321-68046340 None:intergenic 50.0%
ACCATTTCACCTGGGATCTC+AGG + Chr1:68046780-68046799 None:intergenic 50.0%
ACGTACTGGAGAATGTGGCT+GGG - Chr1:68049172-68049191 MsG0180003773.01.T01:intron 50.0%
ACTCTTGGAGGTCATGTGAC+CGG - Chr1:68046299-68046318 MsG0180003773.01.T01:CDS 50.0%
ACTTGGGACACACACAGACA+AGG - Chr1:68047215-68047234 MsG0180003773.01.T01:intron 50.0%
AGAATTGGAGGAACCTCGCA+TGG - Chr1:68047040-68047059 MsG0180003773.01.T01:intron 50.0%
AGAGGAGGTGGAGAAACCTT+TGG - Chr1:68048140-68048159 MsG0180003773.01.T01:intron 50.0%
AGCCCACAGAAATTGGTACC+GGG + Chr1:68044303-68044322 None:intergenic 50.0%
AGCCTGTTTGTCTTTCAGGC+TGG - Chr1:68042385-68042404 MsG0180003773.01.T01:three_prime_UTR 50.0%
ATGGAATTACCTGATCGGCC+TGG + Chr1:68049423-68049442 None:intergenic 50.0%
CAAGGAATAAGGGGTGAGGT+GGG + Chr1:68045523-68045542 None:intergenic 50.0%
CACCAGCCTGAAAGACAAAC+AGG + Chr1:68042390-68042409 None:intergenic 50.0%
CACTGTGACCAACCACTGTT+TGG - Chr1:68046335-68046354 MsG0180003773.01.T01:CDS 50.0%
CATCCCCATCATGCTAAGCT+AGG - Chr1:68046485-68046504 MsG0180003773.01.T01:intron 50.0%
CCCAAAGACCGAATAATCCG+AGG + Chr1:68044378-68044397 None:intergenic 50.0%
CTCCCGGTACCAATTTCTGT+GGG - Chr1:68044298-68044317 MsG0180003773.01.T01:intron 50.0%
CTTGGGACACACACAGACAA+GGG - Chr1:68047216-68047235 MsG0180003773.01.T01:intron 50.0%
GAACTGCAGCAGCTACTAGT+GGG - Chr1:68045607-68045626 MsG0180003773.01.T01:intron 50.0%
GAGGTGGGAAATTGCTTTGG+AGG + Chr1:68045508-68045527 None:intergenic 50.0%
GAGTGTCCACACTAAACGTG+CGG - Chr1:68047814-68047833 MsG0180003773.01.T01:CDS 50.0%
GATCTTCTTCGTCACCATCG+TGG + Chr1:68048922-68048941 None:intergenic 50.0%
GATGAAGAAGATGGCCACGA+TGG - Chr1:68048905-68048924 MsG0180003773.01.T01:intron 50.0%
GATGGCGCTATGGATGGAAA+AGG - Chr1:68043469-68043488 MsG0180003773.01.T01:intron 50.0%
GGCTCATCAAATGCGCTAAG+AGG - Chr1:68041977-68041996 MsG0180003773.01.T01:three_prime_UTR 50.0%
GGCTCCTCCAAGTGTATGAA+AGG - Chr1:68046938-68046957 MsG0180003773.01.T01:intron 50.0%
GGTCACAGTGGAATAGTGGT+TGG + Chr1:68046325-68046344 None:intergenic 50.0%
GGTGAGGTGGGAAATTGCTT+TGG + Chr1:68045511-68045530 None:intergenic 50.0%
GTCTCAGGTTTGAATCCTCC+CGG - Chr1:68044282-68044301 MsG0180003773.01.T01:intron 50.0%
GTCTTTCAGGCTGGTGTTCT+GGG - Chr1:68042394-68042413 MsG0180003773.01.T01:three_prime_UTR 50.0%
GTGGAACGATGCCATTACAG+TGG - Chr1:68041896-68041915 MsG0180003773.01.T01:intron 50.0%
TCCTGAGATCCCAGGTGAAA+TGG - Chr1:68046776-68046795 MsG0180003773.01.T01:CDS 50.0%
TCGAACTCCAGGCTCTTATC+CGG - Chr1:68042457-68042476 MsG0180003773.01.T01:intron 50.0%
TGTCTTTCAGGCTGGTGTTC+TGG - Chr1:68042393-68042412 MsG0180003773.01.T01:three_prime_UTR 50.0%
TGTGGCTGCTGCATATCAGA+AGG + Chr1:68049505-68049524 None:intergenic 50.0%
! AAGAGCGTGGACTTTACAGG+AGG - Chr1:68049073-68049092 MsG0180003773.01.T01:CDS 50.0%
! CAAACAGTGGTTGGTCACAG+TGG + Chr1:68046337-68046356 None:intergenic 50.0%
! CAGAAGATCAGCCGCTTTCA+TGG - Chr1:68045316-68045335 MsG0180003773.01.T01:intron 50.0%
! CCAAGGTGCCTTGCAACTTA+AGG - Chr1:68048209-68048228 MsG0180003773.01.T01:intron 50.0%
! CCTTAAGTTGCAAGGCACCT+TGG + Chr1:68048212-68048231 None:intergenic 50.0%
! CTAGCTTAGCATGATGGGGA+TGG + Chr1:68046487-68046506 None:intergenic 50.0%
! CTGCGAGACCGACATGTTTT+CGG - Chr1:68045184-68045203 MsG0180003773.01.T01:intron 50.0%
! GGAGCCCTCCTTTTGCTAAT+CGG - Chr1:68047948-68047967 MsG0180003773.01.T01:CDS 50.0%
! GGTTGGTCACAGTGGAATAG+TGG + Chr1:68046329-68046348 None:intergenic 50.0%
!! TGGATTGAAGGGTGCTCTTG+TGG + Chr1:68049523-68049542 None:intergenic 50.0%
!! TTCTGTGGGCTAGTCCATAC+TGG - Chr1:68044312-68044331 MsG0180003773.01.T01:intron 50.0%
AAACACGCCATTGCGGCCTA+TGG - Chr1:68046175-68046194 MsG0180003773.01.T01:intron 55.0%
AAAGGGCAACGATGGCGCTA+TGG - Chr1:68043459-68043478 MsG0180003773.01.T01:intron 55.0%
AAGGGCCCTGTCTTCAAACC+TGG + Chr1:68049221-68049240 None:intergenic 55.0%
AGGGCCCTGTCTTCAAACCT+GGG + Chr1:68049220-68049239 None:intergenic 55.0%
CCTCCCGGTACCAATTTCTG+TGG - Chr1:68044297-68044316 MsG0180003773.01.T01:intron 55.0%
CGAACTCCAGGCTCTTATCC+GGG - Chr1:68042458-68042477 MsG0180003773.01.T01:intron 55.0%
CGTACTGGAGAATGTGGCTG+GGG - Chr1:68049173-68049192 MsG0180003773.01.T01:intron 55.0%
GAAAGGCAGACCCTCCATCA+AGG + Chr1:68048075-68048094 None:intergenic 55.0%
GAACTCCAGGCTCTTATCCG+GGG - Chr1:68042459-68042478 MsG0180003773.01.T01:intron 55.0%
GACACGAGCCTACAACGTAC+TGG - Chr1:68049158-68049177 MsG0180003773.01.T01:intron 55.0%
GCCGCAATGGCGTGTTTGTA+TGG + Chr1:68046172-68046191 None:intergenic 55.0%
GGAACTGCAGCAGCTACTAG+TGG - Chr1:68045606-68045625 MsG0180003773.01.T01:intron 55.0%
GTACTGGAGAATGTGGCTGG+GGG - Chr1:68049174-68049193 MsG0180003773.01.T01:intron 55.0%
GTCGACTAGGCTTGAGACCT+TGG - Chr1:68044242-68044261 MsG0180003773.01.T01:intron 55.0%
GTTCATCAGGCTCCCCGAAA+TGG - Chr1:68046694-68046713 MsG0180003773.01.T01:intron 55.0%
TCAGAGGATGCCGGGTATCA+AGG + Chr1:68048838-68048857 None:intergenic 55.0%
TCCGCCCAGGTTTGAAGACA+GGG - Chr1:68049213-68049232 MsG0180003773.01.T01:intron 55.0%
! CCACAGAAATTGGTACCGGG+AGG + Chr1:68044300-68044319 None:intergenic 55.0%
! TCGGAAAGTACACAGCTCCC+CGG + Chr1:68042479-68042498 None:intergenic 55.0%
!! ACGCAGCTCTAGGAAATCGC+TGG - Chr1:68049276-68049295 MsG0180003773.01.T01:intron 55.0%
AGGGCCCTTTGATGCCAACG+AGG - Chr1:68049232-68049251 MsG0180003773.01.T01:intron 60.0%
ATGCAGCTTCCAGGCCGATC+AGG - Chr1:68049411-68049430 MsG0180003773.01.T01:intron 60.0%
CTCCGCCCAGGTTTGAAGAC+AGG - Chr1:68049212-68049231 MsG0180003773.01.T01:intron 60.0%
GCCCTGTCTTCAAACCTGGG+CGG + Chr1:68049217-68049236 None:intergenic 60.0%
GGCAACGATGGCGCTATGGA+TGG - Chr1:68043463-68043482 MsG0180003773.01.T01:intron 60.0%
TGGCACGATTATCTCCGCCC+AGG - Chr1:68049200-68049219 MsG0180003773.01.T01:intron 60.0%
! GAGGCGCTACTGAGGCATAG+TGG + Chr1:68044810-68044829 None:intergenic 60.0%
!! GGGCTATAGAGGCGCTACTG+AGG + Chr1:68044818-68044837 None:intergenic 60.0%
CAGCTCCCCGGATAAGAGCC+TGG + Chr1:68042467-68042486 None:intergenic 65.0%
CTGTGAAGGGATGCCCGCCA+TGG + Chr1:68046206-68046225 None:intergenic 65.0%
GTAGGCTCGTGTCCCGCTGA+AGG + Chr1:68049151-68049170 None:intergenic 65.0%
TGAAGGGATGCCCGCCATGG+CGG + Chr1:68046203-68046222 None:intergenic 65.0%
! GAGAATGTGGCTGGGGGCGT+TGG - Chr1:68049180-68049199 MsG0180003773.01.T01:intron 65.0%
GGCGGCACCATAGGCCGCAA+TGG + Chr1:68046185-68046204 None:intergenic 70.0%
!! GCCTATGGTGCCGCCATGGC+GGG - Chr1:68046190-68046209 MsG0180003773.01.T01:intron 70.0%
!! GGCCTATGGTGCCGCCATGG+CGG - Chr1:68046189-68046208 MsG0180003773.01.T01:intron 70.0%
!! TGCGGCCTATGGTGCCGCCA+TGG - Chr1:68046186-68046205 MsG0180003773.01.T01:intron 70.0%
GCCCGCCATGGCGGCACCAT+AGG + Chr1:68046194-68046213 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 68041734 68049765 68041734 ID=MsG0180003773.01;Name=MsG0180003773.01
Chr1 mRNA 68041734 68049765 68041734 ID=MsG0180003773.01.T01;Parent=MsG0180003773.01;Name=MsG0180003773.01.T01;_AED=0.63;_eAED=0.63;_QI=0|0.27|0.25|0.66|1|1|12|606|399
Chr1 exon 68049690 68049765 68049690 ID=MsG0180003773.01.T01:exon:51804;Parent=MsG0180003773.01.T01
Chr1 exon 68049012 68049096 68049012 ID=MsG0180003773.01.T01:exon:51803;Parent=MsG0180003773.01.T01
Chr1 exon 68047925 68048057 68047925 ID=MsG0180003773.01.T01:exon:51802;Parent=MsG0180003773.01.T01
Chr1 exon 68047638 68047850 68047638 ID=MsG0180003773.01.T01:exon:51801;Parent=MsG0180003773.01.T01
Chr1 exon 68046750 68046941 68046750 ID=MsG0180003773.01.T01:exon:51800;Parent=MsG0180003773.01.T01
Chr1 exon 68046294 68046479 68046294 ID=MsG0180003773.01.T01:exon:51799;Parent=MsG0180003773.01.T01
Chr1 exon 68045815 68045947 68045815 ID=MsG0180003773.01.T01:exon:51798;Parent=MsG0180003773.01.T01
Chr1 exon 68043252 68043431 68043252 ID=MsG0180003773.01.T01:exon:51797;Parent=MsG0180003773.01.T01
Chr1 exon 68042520 68042629 68042520 ID=MsG0180003773.01.T01:exon:51796;Parent=MsG0180003773.01.T01
Chr1 exon 68042183 68042446 68042183 ID=MsG0180003773.01.T01:exon:51795;Parent=MsG0180003773.01.T01
Chr1 exon 68041946 68042075 68041946 ID=MsG0180003773.01.T01:exon:51794;Parent=MsG0180003773.01.T01
Chr1 exon 68041734 68041837 68041734 ID=MsG0180003773.01.T01:exon:51793;Parent=MsG0180003773.01.T01
Chr1 CDS 68049690 68049765 68049690 ID=MsG0180003773.01.T01:cds;Parent=MsG0180003773.01.T01
Chr1 CDS 68049012 68049096 68049012 ID=MsG0180003773.01.T01:cds;Parent=MsG0180003773.01.T01
Chr1 CDS 68047925 68048057 68047925 ID=MsG0180003773.01.T01:cds;Parent=MsG0180003773.01.T01
Chr1 CDS 68047638 68047850 68047638 ID=MsG0180003773.01.T01:cds;Parent=MsG0180003773.01.T01
Chr1 CDS 68046750 68046941 68046750 ID=MsG0180003773.01.T01:cds;Parent=MsG0180003773.01.T01
Chr1 CDS 68046294 68046479 68046294 ID=MsG0180003773.01.T01:cds;Parent=MsG0180003773.01.T01
Chr1 CDS 68045815 68045947 68045815 ID=MsG0180003773.01.T01:cds;Parent=MsG0180003773.01.T01
Chr1 CDS 68043252 68043431 68043252 ID=MsG0180003773.01.T01:cds;Parent=MsG0180003773.01.T01
Chr1 CDS 68042628 68042629 68042628 ID=MsG0180003773.01.T01:cds;Parent=MsG0180003773.01.T01
Chr1 three_prime_UTR 68042520 68042627 68042520 ID=MsG0180003773.01.T01:three_prime_utr;Parent=MsG0180003773.01.T01
Chr1 three_prime_UTR 68042183 68042446 68042183 ID=MsG0180003773.01.T01:three_prime_utr;Parent=MsG0180003773.01.T01
Chr1 three_prime_UTR 68041946 68042075 68041946 ID=MsG0180003773.01.T01:three_prime_utr;Parent=MsG0180003773.01.T01
Chr1 three_prime_UTR 68041734 68041837 68041734 ID=MsG0180003773.01.T01:three_prime_utr;Parent=MsG0180003773.01.T01
Gene Sequence

>MsG0180003773.01.T01

ATGACAACAGACGATGTTTTGCCATTTGAACTGAATGTACCTTCTCCAGATCCTAGTCCATTTGATGAAGATCCGAGCTGGTGTTCTGGGTTGTGTATCTTATGGAATCAGAGATCTGATTTCATCAAGGTCGAACTCCAGGCTCTTATCCGGGGAGCTGTAGCAAGCAAAAAGAGAAAAAGGGCAACGATGGCGCTATGGATGGAAAAGGGTTCTGAGCCTTTAACCGAAAACGAGAAAGCAGACCTTGAAGCCATTGCTGCTATCAAAGAATCTTCAGCTTTAGAACTCAAGGAAAAGGGTAACCAATATGTGAAGATGGGTAAGAAGCATTACTCTGATGCCATTGATTGCTACACAAGGGCAATTGATCAGAAAGCTTTGACTGACTCTGAGACTTCTATTCTTTTTTCAAATAGAGCCCATGTTAATTTGCTACTTGGAAATTTTAGAAGGGCTCTCAATGATGCTAATGATTCAATCAAGTTGTCCCCTTCAAATATAAAGGCAATTTATAGAGCTGCCAAAGCTTCCTTTTCGTTGAATTCGTTGGATGAAGCACAAGACTATTGTCAAATGGGTCTTCATTTGGATCCCAAGAATGAGGAATTGAAGAAGCTTGATAAGCAGATTGAAACTAAGATACTGGAGAATGAAAAACATGAGGCTGAAGTTTCTAACGCTATTGCAGAGGCAAAGGAACTTGTTTCTGCTATAGAAAATAGAGGCTTGAAGATTGGAAAGCCTATGTATCGAGAACTTACTGGGTTAAGGAAACCTGTGTTAGACAAAAGTAACATCCTTCATTGGCCTGTTCTTCTTTTGTATGCAGAAGTTATGTCCAGTGACTTCATTGAGGATTTCTGCGAGACCGACATGTTTTCGGCTGGTTCTGGACCTCGTCTATCTAAGCAAAAACTCCTTCAATATCTATTAGAGGGAACTGCAGCAGCTACTAGTGGGGAAGTTATTGGTGATGAAGAGAAAGACGCAGTTGAGGATTTTAAGCTAAACAAAAATAACCTTGATGGAGGGTCTGCCTTTCATTCTGAAATTTATGCAGTGATTAGAGCAATTGAAATAGCTAGCCAGAGGAGGTGGAGAAACCTTTGGATTGAAACTGATTCATCCCTTGTGCTCATGGCTTTCAATGCTAAATCCAAGGTGCCTTGCAACTTAAGGAACAAGTGGCAAAACTAG

Protein sequence

>MsG0180003773.01.T01

MTTDDVLPFELNVPSPDPSPFDEDPSWCSGLCILWNQRSDFIKVELQALIRGAVASKKRKRATMALWMEKGSEPLTENEKADLEAIAAIKESSALELKEKGNQYVKMGKKHYSDAIDCYTRAIDQKALTDSETSILFSNRAHVNLLLGNFRRALNDANDSIKLSPSNIKAIYRAAKASFSLNSLDEAQDYCQMGLHLDPKNEELKKLDKQIETKILENEKHEAEVSNAIAEAKELVSAIENRGLKIGKPMYRELTGLRKPVLDKSNILHWPVLLLYAEVMSSDFIEDFCETDMFSAGSGPRLSKQKLLQYLLEGTAAATSGEVIGDEEKDAVEDFKLNKNNLDGGSAFHSEIYAVIRAIEIASQRRWRNLWIETDSSLVLMAFNAKSKVPCNLRNKWQN*