Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023601.01.T01 | XP_024628067.1 | 85.811 | 296 | 7 | 2 | 1 | 261 | 73 | 368 | 1.86E-177 | 505 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023601.01.T01 | B9DI20 | 39.674 | 184 | 66 | 6 | 23 | 161 | 97 | 280 | 1.37E-28 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023601.01.T01 | A0A072TVW9 | 85.811 | 296 | 7 | 2 | 1 | 261 | 73 | 368 | 8.90e-178 | 505 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048856.01 | MsG0480023601.01 | 0.812956 | 3.265909e-51 | 2.104926e-48 |
| MsG0180000145.01 | MsG0480023601.01 | 0.846173 | 2.565348e-59 | 4.377408e-56 |
| MsG0180000289.01 | MsG0480023601.01 | 0.801937 | 7.112259e-49 | 3.439699e-46 |
| MsG0180000404.01 | MsG0480023601.01 | 0.807598 | 4.673789e-50 | 2.613951e-47 |
| MsG0180000835.01 | MsG0480023601.01 | 0.819916 | 9.031939e-53 | 7.044013e-50 |
| MsG0180000836.01 | MsG0480023601.01 | 0.805269 | 1.448347e-49 | 7.629093e-47 |
| MsG0180001892.01 | MsG0480023601.01 | 0.844102 | 9.307788e-59 | 1.486996e-55 |
| MsG0180002259.01 | MsG0480023601.01 | 0.803045 | 4.203875e-49 | 2.091286e-46 |
| MsG0180003403.01 | MsG0480023601.01 | 0.803776 | 2.965793e-49 | 1.503389e-46 |
| MsG0180003741.01 | MsG0480023601.01 | 0.822708 | 2.049495e-53 | 1.728692e-50 |
| MsG0180003773.01 | MsG0480023601.01 | 0.813950 | 1.974527e-51 | 1.307438e-48 |
| MsG0180003951.01 | MsG0480023601.01 | 0.827195 | 1.788470e-54 | 1.714517e-51 |
| MsG0180004249.01 | MsG0480023601.01 | 0.802030 | 6.805648e-49 | 3.299261e-46 |
| MsG0180004389.01 | MsG0480023601.01 | 0.817834 | 2.685410e-52 | 1.977037e-49 |
| MsG0180004493.01 | MsG0480023601.01 | 0.803807 | 2.922027e-49 | 1.482371e-46 |
| MsG0180004765.01 | MsG0480023601.01 | 0.830230 | 3.301581e-55 | 3.457820e-52 |
| MsG0180005153.01 | MsG0480023601.01 | 0.843607 | 1.262792e-58 | 1.986387e-55 |
| MsG0180005250.01 | MsG0480023601.01 | 0.807848 | 4.136892e-50 | 2.328827e-47 |
| MsG0180005575.01 | MsG0480023601.01 | 0.830283 | 3.204489e-55 | 3.361005e-52 |
| MsG0180006017.01 | MsG0480023601.01 | 0.802519 | 5.398649e-49 | 2.649882e-46 |
| MsG0180006224.01 | MsG0480023601.01 | 0.817556 | 3.102045e-52 | 2.266358e-49 |
| MsG0280010722.01 | MsG0480023601.01 | 0.808898 | 2.469750e-50 | 1.429205e-47 |
| MsG0280010736.01 | MsG0480023601.01 | 0.819531 | 1.106156e-52 | 8.534653e-50 |
| MsG0280010778.01 | MsG0480023601.01 | 0.814183 | 1.754270e-51 | 1.168993e-48 |
| MsG0280010980.01 | MsG0480023601.01 | 0.804630 | 1.969898e-49 | 1.020693e-46 |
| MsG0280011339.01 | MsG0480023601.01 | 0.824377 | 8.342464e-54 | 7.376260e-51 |
| MsG0380011501.01 | MsG0480023601.01 | 0.805713 | 1.169075e-49 | 6.229214e-47 |
| MsG0380011581.01 | MsG0480023601.01 | 0.809031 | 2.312818e-50 | 1.343228e-47 |
| MsG0380012067.01 | MsG0480023601.01 | 0.829675 | 4.508442e-55 | 4.646579e-52 |
| MsG0380012103.01 | MsG0480023601.01 | 0.804184 | 2.440252e-49 | 1.249983e-46 |
| MsG0380012122.01 | MsG0480023601.01 | 0.807754 | 4.331861e-50 | 2.432681e-47 |
| MsG0380013183.01 | MsG0480023601.01 | 0.806447 | 8.190132e-50 | 4.446454e-47 |
| MsG0380013475.01 | MsG0480023601.01 | 0.816084 | 6.636719e-52 | 4.657542e-49 |
| MsG0380014495.01 | MsG0480023601.01 | 0.814191 | 1.746795e-51 | 1.164264e-48 |
| MsG0380014537.01 | MsG0480023601.01 | 0.803364 | 3.611156e-49 | 1.811153e-46 |
| MsG0380014706.01 | MsG0480023601.01 | 0.800292 | 1.543474e-48 | 7.160450e-46 |
| MsG0480018584.01 | MsG0480023601.01 | 0.804840 | 1.781130e-49 | 9.279815e-47 |
| MsG0480018653.01 | MsG0480023601.01 | 0.844860 | 5.820622e-59 | 9.522320e-56 |
| MsG0480019206.01 | MsG0480023601.01 | 0.837904 | 3.946169e-57 | 5.200016e-54 |
| MsG0480020765.01 | MsG0480023601.01 | 0.826277 | 2.962768e-54 | 2.765909e-51 |
| MsG0480020780.01 | MsG0480023601.01 | 0.815153 | 1.069626e-51 | 7.316792e-49 |
| MsG0480020788.01 | MsG0480023601.01 | 0.818323 | 2.081251e-52 | 1.552945e-49 |
| MsG0480020832.01 | MsG0480023601.01 | 0.809371 | 1.956166e-50 | 1.146500e-47 |
| MsG0480021056.01 | MsG0480023601.01 | 0.856657 | 2.773626e-62 | 6.667636e-59 |
| MsG0480021195.01 | MsG0480023601.01 | 0.809524 | 1.813350e-50 | 1.067107e-47 |
| MsG0480021280.01 | MsG0480023601.01 | 0.807744 | 4.351736e-50 | 2.443319e-47 |
| MsG0480021796.01 | MsG0480023601.01 | 0.819039 | 1.431441e-52 | 1.089496e-49 |
| MsG0480021918.01 | MsG0480023601.01 | 0.821155 | 4.691757e-53 | 3.787193e-50 |
| MsG0480022068.01 | MsG0480023601.01 | 0.802269 | 6.077243e-49 | 2.964199e-46 |
| MsG0480023172.01 | MsG0480023601.01 | 0.833437 | 5.336058e-56 | 6.145213e-53 |
| MsG0480023463.01 | MsG0480023601.01 | 0.808431 | 3.107459e-50 | 1.776508e-47 |
| MsG0480023488.01 | MsG0480023601.01 | 0.828447 | 8.944129e-55 | 8.892936e-52 |
| MsG0480023489.01 | MsG0480023601.01 | 0.840233 | 9.839325e-58 | 1.392706e-54 |
| MsG0480023601.01 | MsG0580024161.01 | 0.811243 | 7.717281e-51 | 4.752493e-48 |
| MsG0480023601.01 | MsG0580024790.01 | -0.830867 | 2.305611e-55 | 2.460014e-52 |
| MsG0480023601.01 | MsG0580025332.01 | 0.822722 | 2.035123e-53 | 1.717251e-50 |
| MsG0480023601.01 | MsG0580025357.01 | -0.802129 | 6.496165e-49 | 3.157141e-46 |
| MsG0480023601.01 | MsG0580025407.01 | -0.829195 | 5.897204e-55 | 5.993257e-52 |
| MsG0480023601.01 | MsG0580025612.01 | 0.816948 | 4.250868e-52 | 3.054636e-49 |
| MsG0480023601.01 | MsG0580025661.01 | 0.831544 | 1.572319e-55 | 1.711731e-52 |
| MsG0480023601.01 | MsG0580025816.01 | 0.802818 | 4.683621e-49 | 2.316734e-46 |
| MsG0480023601.01 | MsG0580025987.01 | 0.808054 | 3.738629e-50 | 2.116109e-47 |
| MsG0480023601.01 | MsG0580027211.01 | 0.803066 | 4.162252e-49 | 2.071631e-46 |
| MsG0480023601.01 | MsG0580027361.01 | 0.800030 | 1.745187e-48 | 8.042138e-46 |
| MsG0480023601.01 | MsG0580027925.01 | 0.842803 | 2.068637e-58 | 3.172244e-55 |
| MsG0480023601.01 | MsG0580028407.01 | 0.806003 | 1.015576e-49 | 5.451835e-47 |
| MsG0480023601.01 | MsG0580029236.01 | 0.834037 | 3.778402e-56 | 4.430254e-53 |
| MsG0480023601.01 | MsG0580029376.01 | 0.800882 | 1.170026e-48 | 5.509909e-46 |
| MsG0480023601.01 | MsG0580029736.01 | 0.817759 | 2.791077e-52 | 2.050651e-49 |
| MsG0480023601.01 | MsG0580029925.01 | 0.809005 | 2.342683e-50 | 1.359599e-47 |
| MsG0480023601.01 | MsG0680030880.01 | 0.835432 | 1.684057e-56 | 2.058980e-53 |
| MsG0480023601.01 | MsG0680030881.01 | 0.815968 | 7.042716e-52 | 4.926722e-49 |
| MsG0480023601.01 | MsG0680031263.01 | 0.813417 | 2.587430e-51 | 1.688753e-48 |
| MsG0480023601.01 | MsG0680031264.01 | 0.806567 | 7.726689e-50 | 4.207692e-47 |
| MsG0480023601.01 | MsG0680031344.01 | 0.802732 | 4.878300e-49 | 2.407700e-46 |
| MsG0480023601.01 | MsG0680031431.01 | 0.825744 | 3.966360e-54 | 3.647131e-51 |
| MsG0480023601.01 | MsG0680031617.01 | 0.818413 | 1.985406e-52 | 1.485285e-49 |
| MsG0480023601.01 | MsG0680031621.01 | 0.819619 | 1.056184e-52 | 8.168356e-50 |
| MsG0480023601.01 | MsG0680031708.01 | 0.802556 | 5.304861e-49 | 2.606291e-46 |
| MsG0480023601.01 | MsG0680032771.01 | 0.819341 | 1.222054e-52 | 9.377706e-50 |
| MsG0480023601.01 | MsG0680034230.01 | 0.813055 | 3.106525e-51 | 2.007593e-48 |
| MsG0480023601.01 | MsG0680034739.01 | 0.828657 | 7.957194e-55 | 7.959882e-52 |
| MsG0480023601.01 | MsG0680035040.01 | 0.806689 | 7.281347e-50 | 3.977485e-47 |
| MsG0480023601.01 | MsG0680035498.01 | 0.819589 | 1.072951e-52 | 8.291699e-50 |
| MsG0480023601.01 | MsG0680035580.01 | 0.821538 | 3.827778e-53 | 3.122852e-50 |
| MsG0480023601.01 | MsG0780036593.01 | 0.828912 | 6.906390e-55 | 6.959475e-52 |
| MsG0480023601.01 | MsG0780036602.01 | 0.828647 | 8.004729e-55 | 8.004829e-52 |
| MsG0480023601.01 | MsG0780036659.01 | 0.811484 | 6.840223e-51 | 4.239422e-48 |
| MsG0480023601.01 | MsG0780036757.01 | 0.847401 | 1.184118e-59 | 2.102158e-56 |
| MsG0480023601.01 | MsG0780036766.01 | 0.819804 | 9.582657e-53 | 7.450185e-50 |
| MsG0480023601.01 | MsG0780037054.01 | 0.832938 | 7.103984e-56 | 8.059536e-53 |
| MsG0480023601.01 | MsG0780037093.01 | 0.807567 | 4.746384e-50 | 2.652440e-47 |
| MsG0480023601.01 | MsG0780037460.01 | 0.803606 | 3.217629e-49 | 1.623964e-46 |
| MsG0480023601.01 | MsG0780038188.01 | 0.801270 | 9.747343e-49 | 4.635315e-46 |
| MsG0480023601.01 | MsG0780038377.01 | 0.810853 | 9.374328e-51 | 5.713958e-48 |
| MsG0480023601.01 | MsG0780038439.01 | 0.813564 | 2.401506e-51 | 1.573656e-48 |
| MsG0480023601.01 | MsG0780038907.01 | 0.822619 | 2.149512e-53 | 1.808659e-50 |
| MsG0480023601.01 | MsG0780039170.01 | 0.844625 | 6.734712e-59 | 1.093678e-55 |
| MsG0480023601.01 | MsG0780039369.01 | 0.816176 | 6.327901e-52 | 4.451989e-49 |
| MsG0480023601.01 | MsG0780039423.01 | 0.804667 | 1.934754e-49 | 1.003486e-46 |
| MsG0480023601.01 | MsG0780039443.01 | 0.839046 | 2.002962e-57 | 2.732820e-54 |
| MsG0480023601.01 | MsG0780039940.01 | 0.810240 | 1.271768e-50 | 7.626184e-48 |
| MsG0480023601.01 | MsG0780040888.01 | 0.811432 | 7.022735e-51 | 4.346501e-48 |
| MsG0480023601.01 | MsG0780041016.01 | 0.811039 | 8.544422e-51 | 5.233904e-48 |
| MsG0480023601.01 | MsG0780041391.01 | 0.804336 | 2.268068e-49 | 1.166359e-46 |
| MsG0480023601.01 | MsG0780041416.01 | 0.812049 | 5.155529e-51 | 3.243470e-48 |
| MsG0480023601.01 | MsG0780041440.01 | 0.836298 | 1.015932e-56 | 1.275122e-53 |
| MsG0480023601.01 | MsG0780041448.01 | 0.803412 | 3.530269e-49 | 1.772839e-46 |
| MsG0480023601.01 | MsG0780041584.01 | 0.808710 | 2.710010e-50 | 1.560454e-47 |
| MsG0480023601.01 | MsG0780041699.01 | 0.803997 | 2.669161e-49 | 1.360763e-46 |
| MsG0480023601.01 | MsG0880041861.01 | 0.822599 | 2.172967e-53 | 1.827359e-50 |
| MsG0480023601.01 | MsG0880041863.01 | 0.838013 | 3.701066e-57 | 4.893958e-54 |
| MsG0480023601.01 | MsG0880042520.01 | 0.821229 | 4.511718e-53 | 3.649379e-50 |
| MsG0480023601.01 | MsG0880043157.01 | 0.816544 | 5.234718e-52 | 3.719915e-49 |
| MsG0480023601.01 | MsG0880043479.01 | 0.807872 | 4.087950e-50 | 2.302713e-47 |
| MsG0480023601.01 | MsG0880043480.01 | 0.809101 | 2.234543e-50 | 1.300251e-47 |
| MsG0480023601.01 | MsG0880043521.01 | 0.830756 | 2.455004e-55 | 2.610892e-52 |
| MsG0480023601.01 | MsG0880043937.01 | 0.811171 | 8.001236e-51 | 4.917884e-48 |
| MsG0480023601.01 | MsG0880043941.01 | 0.803092 | 4.110364e-49 | 2.047176e-46 |
| MsG0480023601.01 | MsG0880044704.01 | 0.815087 | 1.106206e-51 | 7.553580e-49 |
| MsG0480023601.01 | MsG0880044728.01 | 0.818179 | 2.243249e-52 | 1.667218e-49 |
| MsG0480023601.01 | MsG0880044957.01 | 0.803259 | 3.796798e-49 | 1.899197e-46 |
| MsG0480023601.01 | MsG0880045111.01 | 0.810613 | 1.056522e-50 | 6.398431e-48 |
| MsG0480023601.01 | MsG0880045736.01 | 0.801187 | 1.013455e-48 | 4.809370e-46 |
| MsG0480023601.01 | MsG0880045765.01 | 0.811272 | 7.605770e-51 | 4.687346e-48 |
| MsG0480023601.01 | MsG0880046457.01 | 0.805611 | 1.227754e-49 | 6.524412e-47 |
| MsG0480023601.01 | MsG0880046676.01 | 0.800418 | 1.455112e-48 | 6.772044e-46 |
| MsG0480023601.01 | MsG0880046815.01 | 0.804514 | 2.083173e-49 | 1.076134e-46 |
| MsG0480023601.01 | MsG0880047473.01 | 0.805007 | 1.643304e-49 | 8.598155e-47 |
| MsG0480023601.01 | MsG0880047538.01 | 0.811284 | 7.561776e-51 | 4.661636e-48 |
| MsG0480023601.01 | MsG0880047764.01 | 0.821965 | 3.049771e-53 | 2.518330e-50 |
| MsG0380014948.01 | MsG0480023601.01 | 0.818516 | 1.882429e-52 | 1.412116e-49 |
| MsG0380015332.01 | MsG0480023601.01 | 0.852660 | 3.989659e-61 | 8.396684e-58 |
| MsG0380015555.01 | MsG0480023601.01 | 0.821859 | 3.227244e-53 | 2.657070e-50 |
| MsG0380015577.01 | MsG0480023601.01 | 0.803396 | 3.556278e-49 | 1.785189e-46 |
| MsG0380015716.01 | MsG0480023601.01 | 0.810981 | 8.795381e-51 | 5.379835e-48 |
| MsG0380015875.01 | MsG0480023601.01 | 0.828137 | 1.062611e-54 | 1.046995e-51 |
| MsG0380016126.01 | MsG0480023601.01 | 0.824923 | 6.204961e-54 | 5.573794e-51 |
| MsG0380016163.01 | MsG0480023601.01 | 0.802923 | 4.455986e-49 | 2.209887e-46 |
| MsG0380016247.01 | MsG0480023601.01 | 0.817613 | 3.011757e-52 | 2.203809e-49 |
| MsG0380016387.01 | MsG0480023601.01 | 0.816536 | 5.258755e-52 | 3.736145e-49 |
| MsG0380016407.01 | MsG0480023601.01 | 0.818879 | 1.556793e-52 | 1.179639e-49 |
| MsG0380016671.01 | MsG0480023601.01 | 0.812010 | 5.256906e-51 | 3.303921e-48 |
| MsG0380016970.01 | MsG0480023601.01 | 0.817880 | 2.620653e-52 | 1.931801e-49 |
| MsG0380017176.01 | MsG0480023601.01 | 0.809122 | 2.211888e-50 | 1.287789e-47 |
| MsG0380017244.01 | MsG0480023601.01 | 0.809969 | 1.454846e-50 | 8.662643e-48 |
| MsG0380017461.01 | MsG0480023601.01 | 0.832979 | 6.939507e-56 | 7.883012e-53 |
| MsG0380017498.01 | MsG0480023601.01 | 0.818927 | 1.518501e-52 | 1.152230e-49 |
| MsG0380017589.01 | MsG0480023601.01 | 0.834564 | 2.787216e-56 | 3.320289e-53 |
| MsG0380018075.01 | MsG0480023601.01 | 0.816296 | 5.949397e-52 | 4.199565e-49 |
| MsG0480018183.01 | MsG0480023601.01 | 0.842162 | 3.059550e-58 | 4.598551e-55 |
| MsG0480018278.01 | MsG0480023601.01 | 0.802125 | 6.506665e-49 | 3.161925e-46 |
| MsG0280006601.01 | MsG0480023601.01 | 0.812736 | 3.649254e-51 | 2.338557e-48 |
| MsG0280006930.01 | MsG0480023601.01 | 0.803128 | 4.040426e-49 | 2.014268e-46 |
| MsG0280007432.01 | MsG0480023601.01 | 0.819903 | 9.093658e-53 | 7.089407e-50 |
| MsG0280007501.01 | MsG0480023601.01 | 0.811314 | 7.447408e-51 | 4.594694e-48 |
| MsG0280007955.01 | MsG0480023601.01 | 0.853547 | 2.223787e-61 | 4.822564e-58 |
| MsG0280008377.01 | MsG0480023601.01 | 0.824315 | 8.628088e-54 | 7.614947e-51 |
| MsG0280008378.01 | MsG0480023601.01 | 0.818846 | 1.583695e-52 | 1.198960e-49 |
| MsG0280008383.01 | MsG0480023601.01 | 0.801279 | 9.706688e-49 | 4.617035e-46 |
| MsG0280008390.01 | MsG0480023601.01 | 0.810895 | 9.179131e-51 | 5.601353e-48 |
| MsG0280008391.01 | MsG0480023601.01 | 0.826868 | 2.141804e-54 | 2.033472e-51 |
| MsG0280008392.01 | MsG0480023601.01 | 0.806285 | 8.860654e-50 | 4.790628e-47 |
| MsG0280008395.01 | MsG0480023601.01 | 0.810212 | 1.289448e-50 | 7.726124e-48 |
| MsG0280008866.01 | MsG0480023601.01 | 0.804139 | 2.493003e-49 | 1.275571e-46 |
| MsG0280010184.01 | MsG0480023601.01 | 0.806382 | 8.454312e-50 | 4.582107e-47 |
| MsG0280010349.01 | MsG0480023601.01 | 0.810500 | 1.117529e-50 | 6.747317e-48 |
| MsG0280010350.01 | MsG0480023601.01 | 0.818906 | 1.534831e-52 | 1.163925e-49 |
| MsG0280010366.01 | MsG0480023601.01 | 0.807013 | 6.220346e-50 | 3.426497e-47 |
| MsG0280010489.01 | MsG0480023601.01 | 0.808804 | 2.587300e-50 | 1.493504e-47 |
| MsG0280010517.01 | MsG0480023601.01 | 0.806192 | 9.270927e-50 | 5.000667e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023601.01.T01 | MTR_8g096780 | 85.811 | 296 | 7 | 2 | 1 | 261 | 73 | 368 | 0.0 | 505 |
| MsG0480023601.01.T01 | MTR_3g099080 | 50.161 | 311 | 72 | 17 | 6 | 261 | 76 | 358 | 3.73e-70 | 222 |
| MsG0480023601.01.T01 | MTR_7g028740 | 36.842 | 152 | 57 | 5 | 13 | 127 | 64 | 213 | 1.72e-19 | 87.8 |
| MsG0480023601.01.T01 | MTR_2g461920 | 45.556 | 90 | 23 | 1 | 13 | 76 | 157 | 246 | 8.58e-15 | 75.1 |
| MsG0480023601.01.T01 | MTR_7g092930 | 27.801 | 241 | 120 | 8 | 22 | 234 | 63 | 277 | 1.62e-13 | 70.5 |
| MsG0480023601.01.T01 | MTR_1g035010 | 44.444 | 81 | 19 | 1 | 27 | 81 | 104 | 184 | 4.20e-13 | 70.1 |
| MsG0480023601.01.T01 | MTR_4g109770 | 42.424 | 99 | 28 | 2 | 4 | 76 | 103 | 198 | 4.28e-13 | 69.7 |
| MsG0480023601.01.T01 | MTR_2g046550 | 44.872 | 78 | 17 | 1 | 27 | 78 | 139 | 216 | 8.24e-13 | 69.3 |
| MsG0480023601.01.T01 | MTR_1g086250 | 39.362 | 94 | 31 | 1 | 13 | 80 | 133 | 226 | 1.74e-12 | 68.2 |
| MsG0480023601.01.T01 | MTR_1g053715 | 44.156 | 77 | 17 | 1 | 27 | 77 | 74 | 150 | 2.38e-12 | 67.0 |
| MsG0480023601.01.T01 | MTR_3g085180 | 39.423 | 104 | 34 | 2 | 26 | 103 | 164 | 264 | 6.52e-12 | 66.2 |
| MsG0480023601.01.T01 | MTR_7g110320 | 37.895 | 95 | 32 | 2 | 13 | 80 | 130 | 224 | 8.18e-12 | 66.2 |
| MsG0480023601.01.T01 | MTR_7g110320 | 37.895 | 95 | 32 | 2 | 13 | 80 | 130 | 224 | 9.58e-12 | 65.9 |
| MsG0480023601.01.T01 | MTR_5g046670 | 40.964 | 83 | 23 | 1 | 27 | 83 | 244 | 326 | 6.85e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023601.01.T01 | AT5G50670 | 39.674 | 184 | 66 | 6 | 23 | 161 | 97 | 280 | 1.40e-29 | 115 |
| MsG0480023601.01.T01 | AT5G50670 | 39.674 | 184 | 66 | 6 | 23 | 161 | 97 | 280 | 1.40e-29 | 115 |
| MsG0480023601.01.T01 | AT5G50570 | 39.674 | 184 | 66 | 6 | 23 | 161 | 97 | 280 | 1.40e-29 | 115 |
| MsG0480023601.01.T01 | AT5G50570 | 39.674 | 184 | 66 | 6 | 23 | 161 | 97 | 280 | 1.40e-29 | 115 |
| MsG0480023601.01.T01 | AT1G76580 | 48.148 | 81 | 16 | 1 | 27 | 81 | 114 | 194 | 5.11e-15 | 75.9 |
| MsG0480023601.01.T01 | AT1G76580 | 48.148 | 81 | 16 | 1 | 27 | 81 | 114 | 194 | 5.27e-15 | 75.9 |
| MsG0480023601.01.T01 | AT1G76580 | 48.148 | 81 | 16 | 1 | 27 | 81 | 114 | 194 | 6.35e-15 | 75.9 |
| MsG0480023601.01.T01 | AT3G60030 | 41.758 | 91 | 27 | 1 | 22 | 86 | 122 | 212 | 8.40e-14 | 72.4 |
| MsG0480023601.01.T01 | AT1G27370 | 31.818 | 132 | 56 | 2 | 13 | 118 | 162 | 285 | 8.56e-14 | 71.2 |
| MsG0480023601.01.T01 | AT1G27370 | 31.818 | 132 | 56 | 2 | 13 | 118 | 162 | 285 | 1.08e-13 | 71.2 |
| MsG0480023601.01.T01 | AT1G27370 | 31.818 | 132 | 56 | 2 | 13 | 118 | 162 | 285 | 1.08e-13 | 71.2 |
| MsG0480023601.01.T01 | AT1G27370 | 31.818 | 132 | 56 | 2 | 13 | 118 | 162 | 285 | 1.08e-13 | 71.2 |
| MsG0480023601.01.T01 | AT1G27370 | 31.818 | 132 | 56 | 2 | 13 | 118 | 162 | 285 | 1.08e-13 | 71.2 |
| MsG0480023601.01.T01 | AT1G27370 | 31.818 | 132 | 56 | 2 | 13 | 118 | 162 | 285 | 1.08e-13 | 71.2 |
| MsG0480023601.01.T01 | AT1G27370 | 31.818 | 132 | 56 | 2 | 13 | 118 | 162 | 285 | 1.08e-13 | 71.2 |
| MsG0480023601.01.T01 | AT2G47070 | 46.835 | 79 | 16 | 2 | 27 | 79 | 106 | 184 | 1.55e-13 | 71.6 |
| MsG0480023601.01.T01 | AT1G69170 | 29.098 | 244 | 123 | 7 | 12 | 228 | 109 | 329 | 5.53e-13 | 69.3 |
| MsG0480023601.01.T01 | AT1G20980 | 41.667 | 96 | 29 | 2 | 13 | 81 | 106 | 201 | 9.65e-13 | 69.3 |
| MsG0480023601.01.T01 | AT3G57920 | 38.144 | 97 | 34 | 1 | 7 | 77 | 39 | 135 | 7.19e-12 | 65.9 |
| MsG0480023601.01.T01 | AT1G27360 | 40.659 | 91 | 22 | 2 | 27 | 85 | 175 | 265 | 4.44e-11 | 63.5 |
| MsG0480023601.01.T01 | AT1G27360 | 40.659 | 91 | 22 | 2 | 27 | 85 | 175 | 265 | 4.44e-11 | 63.5 |
| MsG0480023601.01.T01 | AT1G27360 | 40.659 | 91 | 22 | 2 | 27 | 85 | 175 | 265 | 4.44e-11 | 63.5 |
| MsG0480023601.01.T01 | AT1G27360 | 40.659 | 91 | 22 | 2 | 27 | 85 | 175 | 265 | 4.44e-11 | 63.5 |
| MsG0480023601.01.T01 | AT2G47070 | 78.788 | 33 | 7 | 0 | 47 | 79 | 23 | 55 | 5.18e-11 | 63.9 |
Find 76 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGGTCTGTGGACTCAGTTT+TGG | 0.232288 | 4:+87507750 | MsG0480023601.01.T01:CDS |
| ACACATGATCATCCTGAAAA+TGG | 0.265481 | 4:+87507655 | MsG0480023601.01.T01:CDS |
| GATCATCAGCAAACAAATTA+AGG | 0.283399 | 4:-87507937 | None:intergenic |
| TCTTCATCATCTTCAACTTC+AGG | 0.292841 | 4:+87504977 | MsG0480023601.01.T01:CDS |
| TTTCAATGGGATTAGATTAG+AGG | 0.294187 | 4:+87507873 | MsG0480023601.01.T01:CDS |
| TCCCATTGAAAAGGAAATAA+TGG | 0.301322 | 4:-87507861 | None:intergenic |
| AAGCTACTACTTCGAGTAAT+AGG | 0.322521 | 4:-87505902 | None:intergenic |
| AAGATGTTGTTCCAAGAAAA+AGG | 0.342659 | 4:-87507423 | None:intergenic |
| AGTTTGCATGACCATAGCTT+GGG | 0.365920 | 4:+87507730 | MsG0480023601.01.T01:CDS |
| CTTGGGTTGGAGGAGATGTT+AGG | 0.371034 | 4:+87507347 | MsG0480023601.01.T01:CDS |
| GGGTTCATCATAGCAGTAGA+AGG | 0.377531 | 4:-87507322 | None:intergenic |
| CTGCTATGATGAACCCTACT+TGG | 0.380036 | 4:+87507329 | MsG0480023601.01.T01:CDS |
| CTACTTCGAGTAATAGGTTC+TGG | 0.389750 | 4:-87505896 | None:intergenic |
| TTTCCCTTCTTTGTAGCTGC+TGG | 0.392060 | 4:-87507449 | None:intergenic |
| TTGTTCCTCAATTTATAACT+TGG | 0.392942 | 4:+87507795 | MsG0480023601.01.T01:CDS |
| CATTATTATTCCCCTGAGAA+TGG | 0.393387 | 4:-87507830 | None:intergenic |
| CAGTGGCTGCTGCTGTTGGC+TGG | 0.413457 | 4:-87507495 | None:intergenic |
| TTCACAGTGGCTGCTGCTGT+TGG | 0.415317 | 4:-87507499 | None:intergenic |
| GTCTAGTGAATCCCATTCTC+AGG | 0.421556 | 4:+87507818 | MsG0480023601.01.T01:CDS |
| TGATCATGTGTTTGTGGTAC+TGG | 0.432050 | 4:-87507643 | None:intergenic |
| GTTGGTGTTGATTGTGGCTA+TGG | 0.432534 | 4:-87507372 | None:intergenic |
| CACTTTGTCTTAATGCATGA+AGG | 0.437853 | 4:+87507991 | MsG0480023601.01.T01:three_prime_UTR |
| CAACCAGATGGTGCATTTGT+TGG | 0.454409 | 4:-87507390 | None:intergenic |
| ATTATTATTCCCCTGAGAAT+GGG | 0.465602 | 4:-87507829 | None:intergenic |
| GAGTTTGCATGACCATAGCT+TGG | 0.466352 | 4:+87507729 | MsG0480023601.01.T01:CDS |
| CTAATCTAATCCCATTGAAA+AGG | 0.467134 | 4:-87507870 | None:intergenic |
| CCATGAGTCGCACGTTTAGC+AGG | 0.467652 | 4:+87507545 | MsG0480023601.01.T01:CDS |
| CTTCATCATCTTCAACTTCA+GGG | 0.469448 | 4:+87504978 | MsG0480023601.01.T01:CDS |
| AACTTGAGAATGGTAGCAAT+TGG | 0.470856 | 4:-87507288 | None:intergenic |
| CGAGTAATAGGTTCTGGTTG+TGG | 0.475165 | 4:-87505890 | None:intergenic |
| TGTTCCTCAATTTATAACTT+GGG | 0.483321 | 4:+87507796 | MsG0480023601.01.T01:CDS |
| GTCTTAATGCATGAAGGCAA+TGG | 0.485388 | 4:+87507997 | MsG0480023601.01.T01:three_prime_UTR |
| ATGAACCCTACTTGGGTTGG+AGG | 0.486277 | 4:+87507337 | MsG0480023601.01.T01:CDS |
| ATGAAGGAAAGAGGAGCTGT+AGG | 0.487258 | 4:+87505831 | MsG0480023601.01.T01:CDS |
| TGACCATAGCTTGGGGTCTG+TGG | 0.493672 | 4:+87507738 | MsG0480023601.01.T01:CDS |
| GTCATGCAAACTCAAGCCTA+AGG | 0.500554 | 4:-87507719 | None:intergenic |
| TCAGATAGTTTCATGTCTTG+TGG | 0.502100 | 4:+87505036 | MsG0480023601.01.T01:CDS |
| CCTGCTAAACGTGCGACTCA+TGG | 0.502871 | 4:-87507545 | None:intergenic |
| TCAACCAGCAGCTACAAAGA+AGG | 0.503966 | 4:+87507445 | MsG0480023601.01.T01:CDS |
| ACTTGAGAATGGTAGCAATT+GGG | 0.507340 | 4:-87507287 | None:intergenic |
| GTGCGACTCATGGATGAAGC+TGG | 0.513016 | 4:-87507535 | None:intergenic |
| ACACCAACAAATGCACCATC+TGG | 0.516097 | 4:+87507387 | MsG0480023601.01.T01:CDS |
| ACATCTCCTCCAACCCAAGT+AGG | 0.516216 | 4:-87507343 | None:intergenic |
| GAGACTATCAAGGCGCCATA+AGG | 0.520583 | 4:+87505089 | MsG0480023601.01.T01:CDS |
| GAGCTAGAGCTATCAACAAT+GGG | 0.520984 | 4:+87505011 | MsG0480023601.01.T01:CDS |
| TCAGGATGATCATGTGTTTG+TGG | 0.524418 | 4:-87507649 | None:intergenic |
| GCATTTGTTGGTGTTGATTG+TGG | 0.524493 | 4:-87507378 | None:intergenic |
| AGCTGTAGGAAACGCTTAGA+TGG | 0.526456 | 4:+87505845 | MsG0480023601.01.T01:CDS |
| AGGAATTTGATGAAGGAAAG+AGG | 0.537908 | 4:+87505822 | MsG0480023601.01.T01:CDS |
| GACAATCTTATAAGAAGAGG+AGG | 0.542569 | 4:-87507913 | None:intergenic |
| TAGACCCAAGTTATAAATTG+AGG | 0.547414 | 4:-87507800 | None:intergenic |
| ATAGTTTCATGTCTTGTGGA+TGG | 0.552133 | 4:+87505040 | MsG0480023601.01.T01:CDS |
| CATCTCCTCCAACCCAAGTA+GGG | 0.552239 | 4:-87507342 | None:intergenic |
| CTCATGGATGAAGCTGGAAG+AGG | 0.554579 | 4:-87507529 | None:intergenic |
| TATACATGTGAACTTGAGAA+TGG | 0.557360 | 4:-87507298 | None:intergenic |
| GCTCTAGAGGAATTTGATGA+AGG | 0.560175 | 4:+87505815 | MsG0480023601.01.T01:CDS |
| CATCAAATTCCTCTAGAGCA+TGG | 0.562487 | 4:-87505811 | None:intergenic |
| ATGATGAACCCTACTTGGGT+TGG | 0.564738 | 4:+87507334 | MsG0480023601.01.T01:CDS |
| CAACCAGCAGCTACAAAGAA+GGG | 0.573578 | 4:+87507446 | MsG0480023601.01.T01:CDS |
| TGCTATGATGAACCCTACTT+GGG | 0.579124 | 4:+87507330 | MsG0480023601.01.T01:CDS |
| GGTCTTGTTTATCAACCAGA+TGG | 0.579275 | 4:-87507402 | None:intergenic |
| GGTGACAATCTTATAAGAAG+AGG | 0.581109 | 4:-87507916 | None:intergenic |
| AGAGCTAGAGCTATCAACAA+TGG | 0.587150 | 4:+87505010 | MsG0480023601.01.T01:CDS |
| AGTCCACAGACCCCAAGCTA+TGG | 0.589981 | 4:-87507741 | None:intergenic |
| TCTAGTGAATCCCATTCTCA+GGG | 0.601724 | 4:+87507819 | MsG0480023601.01.T01:CDS |
| AGTAACTGTAGAGACTATCA+AGG | 0.603080 | 4:+87505079 | MsG0480023601.01.T01:CDS |
| GTTTGCATGACCATAGCTTG+GGG | 0.604245 | 4:+87507731 | MsG0480023601.01.T01:CDS |
| GTGTAGGTTCCATGCTCTAG+AGG | 0.610810 | 4:+87505802 | MsG0480023601.01.T01:intron |
| GCTTAGATGGTCACAACCGA+CGG | 0.619901 | 4:+87505858 | MsG0480023601.01.T01:CDS |
| TCATGCAAACTCAAGCCTAA+GGG | 0.620270 | 4:-87507718 | None:intergenic |
| GGTTCATCATAGCAGTAGAA+GGG | 0.627296 | 4:-87507321 | None:intergenic |
| TGAAAATGGATTGAATCAGA+TGG | 0.631963 | 4:+87507669 | MsG0480023601.01.T01:CDS |
| TTGGGTTCAAATGATCAGAG+TGG | 0.682356 | 4:+87507769 | MsG0480023601.01.T01:CDS |
| AAGAGGTTGGTTGTTCACAG+TGG | 0.701313 | 4:-87507512 | None:intergenic |
| TGGATGAAGCTGGAAGAGGT+TGG | 0.704527 | 4:-87507525 | None:intergenic |
| CTAGTGAATCCCATTCTCAG+GGG | 0.746099 | 4:+87507820 | MsG0480023601.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAACCATTTATAACTTA+AGG | + | Chr4:87507003-87507022 | MsG0480023601.01.T01:intron | 15.0% |
| !! | AAATTTATGTATCTACAATT+GGG | - | Chr4:87507241-87507260 | None:intergenic | 15.0% |
| !! | AATAACCATTTATAACTTAA+GGG | + | Chr4:87507004-87507023 | MsG0480023601.01.T01:intron | 15.0% |
| !! | TAAATTTATGTATCTACAAT+TGG | - | Chr4:87507242-87507261 | None:intergenic | 15.0% |
| !! | TAGATAAATATTTAGATCAA+AGG | - | Chr4:87505665-87505684 | None:intergenic | 15.0% |
| !!! | ATCTAACATTTGAAATTTAA+GGG | - | Chr4:87506813-87506832 | None:intergenic | 15.0% |
| !!! | CAACAATATATTTTTTTATC+AGG | + | Chr4:87507262-87507281 | MsG0480023601.01.T01:intron | 15.0% |
| !!! | TATCTAACATTTGAAATTTA+AGG | - | Chr4:87506814-87506833 | None:intergenic | 15.0% |
| !! | AAATGTACAAATACAATACA+AGG | - | Chr4:87506376-87506395 | None:intergenic | 20.0% |
| !! | AACATAAATAAGAGAATAAC+CGG | - | Chr4:87506720-87506739 | None:intergenic | 20.0% |
| !! | ACATAATTTAGAAGTTTACT+AGG | - | Chr4:87505320-87505339 | None:intergenic | 20.0% |
| !! | ATAACCATTTATAACTTAAG+GGG | + | Chr4:87507005-87507024 | MsG0480023601.01.T01:intron | 20.0% |
| !! | ATAATAAATTAAACCAAACC+AGG | + | Chr4:87506525-87506544 | MsG0480023601.01.T01:intron | 20.0% |
| !! | ATGATTAAAAAGAAACTTGA+GGG | + | Chr4:87507109-87507128 | MsG0480023601.01.T01:intron | 20.0% |
| !! | ATTATTCATGATTGAAATTC+CGG | + | Chr4:87506698-87506717 | MsG0480023601.01.T01:intron | 20.0% |
| !! | CTCATATAAAGTAGTATATA+TGG | - | Chr4:87506621-87506640 | None:intergenic | 20.0% |
| !! | CTTTATCAGTATTAATGATT+TGG | + | Chr4:87507178-87507197 | MsG0480023601.01.T01:intron | 20.0% |
| !! | GAGATCAAATAAAATGAAAA+AGG | + | Chr4:87507074-87507093 | MsG0480023601.01.T01:intron | 20.0% |
| !! | TCCTTCTTGTTAAAATATAA+TGG | - | Chr4:87506941-87506960 | None:intergenic | 20.0% |
| !!! | AAGTTTCTTTTTAATCATGT+TGG | - | Chr4:87507107-87507126 | None:intergenic | 20.0% |
| !!! | AGAAATATCACTTCTTTTTT+GGG | - | Chr4:87506478-87506497 | None:intergenic | 20.0% |
| !!! | AGTTTCTTTTTAATCATGTT+GGG | - | Chr4:87507106-87507125 | None:intergenic | 20.0% |
| !!! | ATTAACAAGTGTTTTAGTAA+GGG | - | Chr4:87505522-87505541 | None:intergenic | 20.0% |
| !!! | ATTTTATCTGATTTTGCATA+TGG | + | Chr4:87505631-87505650 | MsG0480023601.01.T01:intron | 20.0% |
| !!! | ATTTTGTATCTTTCTGAAAA+AGG | - | Chr4:87507577-87507596 | None:intergenic | 20.0% |
| !!! | TAGAAATATCACTTCTTTTT+TGG | - | Chr4:87506479-87506498 | None:intergenic | 20.0% |
| !!! | TATTAACAAGTGTTTTAGTA+AGG | - | Chr4:87505523-87505542 | None:intergenic | 20.0% |
| ! | ATCTACTAGTAAGATTTAGA+TGG | - | Chr4:87505718-87505737 | None:intergenic | 25.0% |
| ! | ATGAAGTTAGCATGAATAAT+GGG | - | Chr4:87505351-87505370 | None:intergenic | 25.0% |
| ! | CAAAAATTACATAATGCACT+TGG | + | Chr4:87506066-87506085 | MsG0480023601.01.T01:intron | 25.0% |
| ! | CAAACGAAAAATAGACAAAA+GGG | - | Chr4:87506894-87506913 | None:intergenic | 25.0% |
| ! | CATGATTAAAAAGAAACTTG+AGG | + | Chr4:87507108-87507127 | MsG0480023601.01.T01:intron | 25.0% |
| ! | CTATAACTTTAAACTAACCT+TGG | - | Chr4:87505939-87505958 | None:intergenic | 25.0% |
| ! | GTTAAAATATAATGGCACAT+AGG | - | Chr4:87506933-87506952 | None:intergenic | 25.0% |
| ! | TAACCATTTATAACTTAAGG+GGG | + | Chr4:87507006-87507025 | MsG0480023601.01.T01:intron | 25.0% |
| ! | TATGAAGTTAGCATGAATAA+TGG | - | Chr4:87505352-87505371 | None:intergenic | 25.0% |
| ! | TCAAACGAAAAATAGACAAA+AGG | - | Chr4:87506895-87506914 | None:intergenic | 25.0% |
| ! | TCAATAATTCTTGCATCATT+CGG | + | Chr4:87506321-87506340 | MsG0480023601.01.T01:intron | 25.0% |
| ! | TCCAAATCTAGACAATTATT+GGG | - | Chr4:87505987-87506006 | None:intergenic | 25.0% |
| ! | TCTACTAGTAAGATTTAGAT+GGG | - | Chr4:87505717-87505736 | None:intergenic | 25.0% |
| ! | TGTTCCTCAATTTATAACTT+GGG | + | Chr4:87507796-87507815 | MsG0480023601.01.T01:CDS | 25.0% |
| ! | TTGTTCCTCAATTTATAACT+TGG | + | Chr4:87507795-87507814 | MsG0480023601.01.T01:CDS | 25.0% |
| !! | ATTGAGATTCCTTTTTGTTA+AGG | - | Chr4:87505450-87505469 | None:intergenic | 25.0% |
| !! | TCCATTATTTCCTTTTCAAT+GGG | + | Chr4:87507860-87507879 | MsG0480023601.01.T01:CDS | 25.0% |
| !! | TTTTAACAAGAAGGAAAAGA+AGG | + | Chr4:87506946-87506965 | MsG0480023601.01.T01:intron | 25.0% |
| !!! | AGTAGATTCTGAAATTAAAG+TGG | + | Chr4:87505731-87505750 | MsG0480023601.01.T01:intron | 25.0% |
| !!! | CATGTTTGTTGTTTTAGTAA+TGG | - | Chr4:87506185-87506204 | None:intergenic | 25.0% |
| !!! | GCCATTATATTTTAACAAGA+AGG | + | Chr4:87506937-87506956 | MsG0480023601.01.T01:intron | 25.0% |
| !!! | GTTTTGTTTTCGTTATGAAA+AGG | + | Chr4:87507202-87507221 | MsG0480023601.01.T01:intron | 25.0% |
| AAGATGTTGTTCCAAGAAAA+AGG | - | Chr4:87507426-87507445 | None:intergenic | 30.0% | |
| AAGCACAATCCTTAACAAAA+AGG | + | Chr4:87505438-87505457 | MsG0480023601.01.T01:intron | 30.0% | |
| AATGAAGTTCACATACCTTA+TGG | - | Chr4:87505107-87505126 | None:intergenic | 30.0% | |
| ACCCAATAATTGTCTAGATT+TGG | + | Chr4:87505983-87506002 | MsG0480023601.01.T01:intron | 30.0% | |
| ATAGTGCAGTAGTTATCTAT+AGG | + | Chr4:87506747-87506766 | MsG0480023601.01.T01:intron | 30.0% | |
| ATTATTATTCCCCTGAGAAT+GGG | - | Chr4:87507832-87507851 | None:intergenic | 30.0% | |
| CTAATCTAATCCCATTGAAA+AGG | - | Chr4:87507873-87507892 | None:intergenic | 30.0% | |
| CTACTAGTAAGATTTAGATG+GGG | - | Chr4:87505716-87505735 | None:intergenic | 30.0% | |
| CTCCAAATCTAGACAATTAT+TGG | - | Chr4:87505988-87506007 | None:intergenic | 30.0% | |
| CTTGGTATAAATTCTCAAAG+AGG | + | Chr4:87505600-87505619 | MsG0480023601.01.T01:intron | 30.0% | |
| CTTTAAACTAACCTTGGTAA+TGG | - | Chr4:87505933-87505952 | None:intergenic | 30.0% | |
| GATCATCAGCAAACAAATTA+AGG | - | Chr4:87507940-87507959 | None:intergenic | 30.0% | |
| TAAGATGTTTGTACCTATGT+GGG | - | Chr4:87506029-87506048 | None:intergenic | 30.0% | |
| TAGACCCAAGTTATAAATTG+AGG | - | Chr4:87507803-87507822 | None:intergenic | 30.0% | |
| TAGCTAACATATTATCTGAG+TGG | + | Chr4:87505960-87505979 | MsG0480023601.01.T01:intron | 30.0% | |
| TATACATGTGAACTTGAGAA+TGG | - | Chr4:87507301-87507320 | None:intergenic | 30.0% | |
| TCATAAACATGGCAAATAAG+TGG | - | Chr4:87506151-87506170 | None:intergenic | 30.0% | |
| TCCCATTGAAAAGGAAATAA+TGG | - | Chr4:87507864-87507883 | None:intergenic | 30.0% | |
| TGGTGAAAATGATATTCTCT+AGG | + | Chr4:87505751-87505770 | MsG0480023601.01.T01:intron | 30.0% | |
| TTAAGATGTTTGTACCTATG+TGG | - | Chr4:87506030-87506049 | None:intergenic | 30.0% | |
| TTCTCTAGGTTCATTTATGA+AGG | + | Chr4:87505765-87505784 | MsG0480023601.01.T01:intron | 30.0% | |
| TTTCAATGGGATTAGATTAG+AGG | + | Chr4:87507873-87507892 | MsG0480023601.01.T01:CDS | 30.0% | |
| TTTGACTGTGTGTAGTTAAT+TGG | + | Chr4:87506406-87506425 | MsG0480023601.01.T01:intron | 30.0% | |
| ! | AATTTAGCCTTCATTAGAAG+AGG | + | Chr4:87505412-87505431 | MsG0480023601.01.T01:intron | 30.0% |
| ! | ATCTGATTCAATCCATTTTC+AGG | - | Chr4:87507670-87507689 | None:intergenic | 30.0% |
| ! | CTCCATTATTTCCTTTTCAA+TGG | + | Chr4:87507859-87507878 | MsG0480023601.01.T01:CDS | 30.0% |
| ! | GATAAACAAGACCTTTTTCT+TGG | + | Chr4:87507412-87507431 | MsG0480023601.01.T01:CDS | 30.0% |
| ! | GTATCTTTCTGAAAAAGGAT+TGG | - | Chr4:87507572-87507591 | None:intergenic | 30.0% |
| !! | TGAAAATGGATTGAATCAGA+TGG | + | Chr4:87507669-87507688 | MsG0480023601.01.T01:CDS | 30.0% |
| AACTTGAGAATGGTAGCAAT+TGG | - | Chr4:87507291-87507310 | None:intergenic | 35.0% | |
| AAGATGTTTGTACCTATGTG+GGG | - | Chr4:87506028-87506047 | None:intergenic | 35.0% | |
| AAGCTACTACTTCGAGTAAT+AGG | - | Chr4:87505905-87505924 | None:intergenic | 35.0% | |
| AATGGCACATAGGAAACATT+TGG | - | Chr4:87506923-87506942 | None:intergenic | 35.0% | |
| AATTACATAATGCACTTGGC+TGG | + | Chr4:87506070-87506089 | MsG0480023601.01.T01:intron | 35.0% | |
| ACACATGATCATCCTGAAAA+TGG | + | Chr4:87507655-87507674 | MsG0480023601.01.T01:CDS | 35.0% | |
| ACTTGAGAATGGTAGCAATT+GGG | - | Chr4:87507290-87507309 | None:intergenic | 35.0% | |
| AGGAATTTGATGAAGGAAAG+AGG | + | Chr4:87505822-87505841 | MsG0480023601.01.T01:CDS | 35.0% | |
| AGTAACTGTAGAGACTATCA+AGG | + | Chr4:87505079-87505098 | MsG0480023601.01.T01:CDS | 35.0% | |
| ATAGTTTCATGTCTTGTGGA+TGG | + | Chr4:87505040-87505059 | MsG0480023601.01.T01:CDS | 35.0% | |
| ATGACAAAGCATACACACAA+GGG | - | Chr4:87505226-87505245 | None:intergenic | 35.0% | |
| CAAATAAGTGGACCAAATCA+AGG | - | Chr4:87506139-87506158 | None:intergenic | 35.0% | |
| CACTTTGTCTTAATGCATGA+AGG | + | Chr4:87507991-87508010 | MsG0480023601.01.T01:three_prime_UTR | 35.0% | |
| CATTATTATTCCCCTGAGAA+TGG | - | Chr4:87507833-87507852 | None:intergenic | 35.0% | |
| CCACTAGATTGTCATAAACA+TGG | - | Chr4:87506162-87506181 | None:intergenic | 35.0% | |
| CCATGTTTATGACAATCTAG+TGG | + | Chr4:87506159-87506178 | MsG0480023601.01.T01:intron | 35.0% | |
| CTACAATTGGGTATACATGA+AGG | - | Chr4:87507229-87507248 | None:intergenic | 35.0% | |
| CTTCATCATCTTCAACTTCA+GGG | + | Chr4:87504978-87504997 | MsG0480023601.01.T01:CDS | 35.0% | |
| GACAATCTTATAAGAAGAGG+AGG | - | Chr4:87507916-87507935 | None:intergenic | 35.0% | |
| GGAAGTTTCCTTAATTGTGT+AGG | + | Chr4:87505786-87505805 | MsG0480023601.01.T01:intron | 35.0% | |
| GGTGACAATCTTATAAGAAG+AGG | - | Chr4:87507919-87507938 | None:intergenic | 35.0% | |
| TCAGATAGTTTCATGTCTTG+TGG | + | Chr4:87505036-87505055 | MsG0480023601.01.T01:CDS | 35.0% | |
| TCTTCATCATCTTCAACTTC+AGG | + | Chr4:87504977-87504996 | MsG0480023601.01.T01:CDS | 35.0% | |
| TTGCCCCCTTAAGTTATAAA+TGG | - | Chr4:87507012-87507031 | None:intergenic | 35.0% | |
| ! | GTTATCTATAGGTTTTGCTC+TGG | + | Chr4:87506758-87506777 | MsG0480023601.01.T01:intron | 35.0% |
| ! | TAGCTTTTTGTCCATTACCA+AGG | + | Chr4:87505919-87505938 | MsG0480023601.01.T01:intron | 35.0% |
| ! | TCATCTTTTATGCAACCCTT+AGG | + | Chr4:87507703-87507722 | MsG0480023601.01.T01:CDS | 35.0% |
| !! | ACTTTTCAGCTTTTGAGTGA+GGG | + | Chr4:87506238-87506257 | MsG0480023601.01.T01:intron | 35.0% |
| !! | ATACACACATGTTGGTAACT+TGG | + | Chr4:87505582-87505601 | MsG0480023601.01.T01:intron | 35.0% |
| AAAAGAACCTGCTACATTGC+TGG | - | Chr4:87505176-87505195 | None:intergenic | 40.0% | |
| AGAGCTAGAGCTATCAACAA+TGG | + | Chr4:87505010-87505029 | MsG0480023601.01.T01:CDS | 40.0% | |
| AGTTTGCATGACCATAGCTT+GGG | + | Chr4:87507730-87507749 | MsG0480023601.01.T01:CDS | 40.0% | |
| CATGACAAAGCATACACACA+AGG | - | Chr4:87505227-87505246 | None:intergenic | 40.0% | |
| CTACTTCGAGTAATAGGTTC+TGG | - | Chr4:87505899-87505918 | None:intergenic | 40.0% | |
| GAGCTAGAGCTATCAACAAT+GGG | + | Chr4:87505011-87505030 | MsG0480023601.01.T01:CDS | 40.0% | |
| GCATGGAACCTACACAATTA+AGG | - | Chr4:87505797-87505816 | None:intergenic | 40.0% | |
| GCTTCTACCTCTTCTAATGA+AGG | - | Chr4:87505422-87505441 | None:intergenic | 40.0% | |
| GGGGAAACACAAAAAGCTTA+TGG | - | Chr4:87505206-87505225 | None:intergenic | 40.0% | |
| GGTTCATCATAGCAGTAGAA+GGG | - | Chr4:87507324-87507343 | None:intergenic | 40.0% | |
| GTCAACACATACACACATGT+TGG | + | Chr4:87505574-87505593 | MsG0480023601.01.T01:intron | 40.0% | |
| GTCTTAATGCATGAAGGCAA+TGG | + | Chr4:87507997-87508016 | MsG0480023601.01.T01:three_prime_UTR | 40.0% | |
| TAAGTGGACCAAATCAAGGA+TGG | - | Chr4:87506135-87506154 | None:intergenic | 40.0% | |
| TCAGGATGATCATGTGTTTG+TGG | - | Chr4:87507652-87507671 | None:intergenic | 40.0% | |
| TCATGCAAACTCAAGCCTAA+GGG | - | Chr4:87507721-87507740 | None:intergenic | 40.0% | |
| TCTAGTGAATCCCATTCTCA+GGG | + | Chr4:87507819-87507838 | MsG0480023601.01.T01:CDS | 40.0% | |
| TGACAAAGCATACACACAAG+GGG | - | Chr4:87505225-87505244 | None:intergenic | 40.0% | |
| TGATCATGTGTTTGTGGTAC+TGG | - | Chr4:87507646-87507665 | None:intergenic | 40.0% | |
| TGCTATGATGAACCCTACTT+GGG | + | Chr4:87507330-87507349 | MsG0480023601.01.T01:CDS | 40.0% | |
| TTGGGTTCAAATGATCAGAG+TGG | + | Chr4:87507769-87507788 | MsG0480023601.01.T01:CDS | 40.0% | |
| ! | CAATTGGTGGACATAAGCAA+AGG | + | Chr4:87505145-87505164 | MsG0480023601.01.T01:intron | 40.0% |
| !! | CATCAAATTCCTCTAGAGCA+TGG | - | Chr4:87505814-87505833 | None:intergenic | 40.0% |
| !! | GACTTTTCAGCTTTTGAGTG+AGG | + | Chr4:87506237-87506256 | MsG0480023601.01.T01:intron | 40.0% |
| !! | GCATTTGTTGGTGTTGATTG+TGG | - | Chr4:87507381-87507400 | None:intergenic | 40.0% |
| !! | GCTCTAGAGGAATTTGATGA+AGG | + | Chr4:87505815-87505834 | MsG0480023601.01.T01:CDS | 40.0% |
| !! | GGTCTTGTTTATCAACCAGA+TGG | - | Chr4:87507405-87507424 | None:intergenic | 40.0% |
| AAGACTGCACAGGTCACAAT+TGG | + | Chr4:87505129-87505148 | MsG0480023601.01.T01:intron | 45.0% | |
| AATTGTGACCTGTGCAGTCT+TGG | - | Chr4:87505130-87505149 | None:intergenic | 45.0% | |
| ACACCAACAAATGCACCATC+TGG | + | Chr4:87507387-87507406 | MsG0480023601.01.T01:CDS | 45.0% | |
| ACTTCATTCCAAGACTGCAC+AGG | + | Chr4:87505119-87505138 | MsG0480023601.01.T01:intron | 45.0% | |
| AGCTGTAGGAAACGCTTAGA+TGG | + | Chr4:87505845-87505864 | MsG0480023601.01.T01:CDS | 45.0% | |
| ATGAAGGAAAGAGGAGCTGT+AGG | + | Chr4:87505831-87505850 | MsG0480023601.01.T01:CDS | 45.0% | |
| ATGATGAACCCTACTTGGGT+TGG | + | Chr4:87507334-87507353 | MsG0480023601.01.T01:CDS | 45.0% | |
| CAACCAGATGGTGCATTTGT+TGG | - | Chr4:87507393-87507412 | None:intergenic | 45.0% | |
| CAACCAGCAGCTACAAAGAA+GGG | + | Chr4:87507446-87507465 | MsG0480023601.01.T01:CDS | 45.0% | |
| CTAGTGAATCCCATTCTCAG+GGG | + | Chr4:87507820-87507839 | MsG0480023601.01.T01:CDS | 45.0% | |
| CTGCTATGATGAACCCTACT+TGG | + | Chr4:87507329-87507348 | MsG0480023601.01.T01:CDS | 45.0% | |
| GAGTTTGCATGACCATAGCT+TGG | + | Chr4:87507729-87507748 | MsG0480023601.01.T01:CDS | 45.0% | |
| GGGTTCATCATAGCAGTAGA+AGG | - | Chr4:87507325-87507344 | None:intergenic | 45.0% | |
| GTCATGCAAACTCAAGCCTA+AGG | - | Chr4:87507722-87507741 | None:intergenic | 45.0% | |
| GTCTAGTGAATCCCATTCTC+AGG | + | Chr4:87507818-87507837 | MsG0480023601.01.T01:CDS | 45.0% | |
| GTTTGCATGACCATAGCTTG+GGG | + | Chr4:87507731-87507750 | MsG0480023601.01.T01:CDS | 45.0% | |
| TCAACCAGCAGCTACAAAGA+AGG | + | Chr4:87507445-87507464 | MsG0480023601.01.T01:CDS | 45.0% | |
| TGGACCAAATCAAGGATGGT+GGG | - | Chr4:87506131-87506150 | None:intergenic | 45.0% | |
| TTTCCCTTCTTTGTAGCTGC+TGG | - | Chr4:87507452-87507471 | None:intergenic | 45.0% | |
| ! | AAGAGGTTGGTTGTTCACAG+TGG | - | Chr4:87507515-87507534 | None:intergenic | 45.0% |
| ! | ATTTGGAGCAGACAATGCTG+AGG | + | Chr4:87506000-87506019 | MsG0480023601.01.T01:intron | 45.0% |
| ! | CGAGTAATAGGTTCTGGTTG+TGG | - | Chr4:87505893-87505912 | None:intergenic | 45.0% |
| ! | GTTGTGGTTTTCTTCTCCGT+CGG | - | Chr4:87505877-87505896 | None:intergenic | 45.0% |
| !! | GTTGGTGTTGATTGTGGCTA+TGG | - | Chr4:87507375-87507394 | None:intergenic | 45.0% |
| AATGCTGAGGATCCCCACAT+AGG | + | Chr4:87506013-87506032 | MsG0480023601.01.T01:intron | 50.0% | |
| ACATCTCCTCCAACCCAAGT+AGG | - | Chr4:87507346-87507365 | None:intergenic | 50.0% | |
| ACTAGACACGACACCTGGTT+TGG | - | Chr4:87506541-87506560 | None:intergenic | 50.0% | |
| ACTGCACAGGTCACAATTGG+TGG | + | Chr4:87505132-87505151 | MsG0480023601.01.T01:intron | 50.0% | |
| CATCTCCTCCAACCCAAGTA+GGG | - | Chr4:87507345-87507364 | None:intergenic | 50.0% | |
| CTCATGGATGAAGCTGGAAG+AGG | - | Chr4:87507532-87507551 | None:intergenic | 50.0% | |
| GCTTAGATGGTCACAACCGA+CGG | + | Chr4:87505858-87505877 | MsG0480023601.01.T01:CDS | 50.0% | |
| GTGGACCAAATCAAGGATGG+TGG | - | Chr4:87506132-87506151 | None:intergenic | 50.0% | |
| GTGTAGGTTCCATGCTCTAG+AGG | + | Chr4:87505802-87505821 | MsG0480023601.01.T01:intron | 50.0% | |
| TAGACACTAGACACGACACC+TGG | - | Chr4:87506546-87506565 | None:intergenic | 50.0% | |
| TGGATGAAGCTGGAAGAGGT+TGG | - | Chr4:87507528-87507547 | None:intergenic | 50.0% | |
| ! | GAGACTATCAAGGCGCCATA+AGG | + | Chr4:87505089-87505108 | MsG0480023601.01.T01:CDS | 50.0% |
| ! | GGGTCTGTGGACTCAGTTTT+GGG | + | Chr4:87507751-87507770 | MsG0480023601.01.T01:CDS | 50.0% |
| !! | ATGAACCCTACTTGGGTTGG+AGG | + | Chr4:87507337-87507356 | MsG0480023601.01.T01:CDS | 50.0% |
| !! | CTTGGGTTGGAGGAGATGTT+AGG | + | Chr4:87507347-87507366 | MsG0480023601.01.T01:CDS | 50.0% |
| AGTCCACAGACCCCAAGCTA+TGG | - | Chr4:87507744-87507763 | None:intergenic | 55.0% | |
| CCATGAGTCGCACGTTTAGC+AGG | + | Chr4:87507545-87507564 | MsG0480023601.01.T01:CDS | 55.0% | |
| CCTGCTAAACGTGCGACTCA+TGG | - | Chr4:87507548-87507567 | None:intergenic | 55.0% | |
| GCTGCCCACCATCCTTGATT+TGG | + | Chr4:87506124-87506143 | MsG0480023601.01.T01:intron | 55.0% | |
| GGTTCTGCCAGCAATGTAGC+AGG | + | Chr4:87505166-87505185 | MsG0480023601.01.T01:intron | 55.0% | |
| GTGCGACTCATGGATGAAGC+TGG | - | Chr4:87507538-87507557 | None:intergenic | 55.0% | |
| TGACCATAGCTTGGGGTCTG+TGG | + | Chr4:87507738-87507757 | MsG0480023601.01.T01:CDS | 55.0% | |
| TTCACAGTGGCTGCTGCTGT+TGG | - | Chr4:87507502-87507521 | None:intergenic | 55.0% | |
| ! | GGGGTCTGTGGACTCAGTTT+TGG | + | Chr4:87507750-87507769 | MsG0480023601.01.T01:CDS | 55.0% |
| ! | TAATGCACTTGGCTGGCTGC+TGG | + | Chr4:87506077-87506096 | MsG0480023601.01.T01:intron | 55.0% |
| !! | ATCAAGGATGGTGGGCAGCA+TGG | - | Chr4:87506123-87506142 | None:intergenic | 55.0% |
| CAGTGGCTGCTGCTGTTGGC+TGG | - | Chr4:87507498-87507517 | None:intergenic | 65.0% | |
| GGTGGGCAGCATGGTGAGTG+AGG | - | Chr4:87506114-87506133 | None:intergenic | 65.0% | |
| ! | GCACTTGGCTGGCTGCTGGC+TGG | + | Chr4:87506081-87506100 | MsG0480023601.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 87504971 | 87508035 | 87504971 | ID=MsG0480023601.01;Name=MsG0480023601.01 |
| Chr4 | mRNA | 87504971 | 87508035 | 87504971 | ID=MsG0480023601.01.T01;Parent=MsG0480023601.01;Name=MsG0480023601.01.T01;_AED=0.17;_eAED=0.17;_QI=0|0|0.33|1|1|1|3|93|301 |
| Chr4 | exon | 87504971 | 87505110 | 87504971 | ID=MsG0480023601.01.T01:exon:6561;Parent=MsG0480023601.01.T01 |
| Chr4 | exon | 87505808 | 87505914 | 87505808 | ID=MsG0480023601.01.T01:exon:6562;Parent=MsG0480023601.01.T01 |
| Chr4 | exon | 87507284 | 87508035 | 87507284 | ID=MsG0480023601.01.T01:exon:6563;Parent=MsG0480023601.01.T01 |
| Chr4 | CDS | 87504971 | 87505110 | 87504971 | ID=MsG0480023601.01.T01:cds;Parent=MsG0480023601.01.T01 |
| Chr4 | CDS | 87505808 | 87505914 | 87505808 | ID=MsG0480023601.01.T01:cds;Parent=MsG0480023601.01.T01 |
| Chr4 | CDS | 87507284 | 87507942 | 87507284 | ID=MsG0480023601.01.T01:cds;Parent=MsG0480023601.01.T01 |
| Chr4 | three_prime_UTR | 87507943 | 87508035 | 87507943 | ID=MsG0480023601.01.T01:three_prime_utr;Parent=MsG0480023601.01.T01 |
| Gene Sequence |
| Protein sequence |
