AlfalfaGEDB | MsG0880047447.01

M. sativa cultivar ZhongmuNo.1 / MsG0880047447.01

KEGG: -
GO: -
PFAM: PF04782

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880047447.01.T01	XP_003610071.2	56.489	262	70	4	62	279	476	737	1.71E-80	268
MsG0880047447.01.T01	XP_003610071.2	90.541	74	7	0	29	102	308	381	2.93E-32	137

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880047447.01.T01	G7JUC3	56.489	262	70	4	62	279	476	737	8.17e-81	268

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048781.01	MsG0880047447.01	0.825313	5.016660e-54	4.556544e-51
MsG0880045612.01	MsG0880047447.01	0.831698	1.440269e-55	1.575177e-52
MsG0880046646.01	MsG0880047447.01	0.812722	3.674390e-51	2.353831e-48
MsG0880046885.01	MsG0880047447.01	0.824187	9.248008e-54	8.133038e-51
MsG0880047447.01	MsG0880047649.01	0.826771	2.258886e-54	2.138572e-51
MsG0180003427.01	MsG0880047447.01	0.825988	3.470782e-54	3.213672e-51
MsG0180003485.01	MsG0880047447.01	0.855749	5.120261e-62	1.194402e-58
MsG0180003658.01	MsG0880047447.01	0.808938	2.421528e-50	1.402813e-47
MsG0180003698.01	MsG0880047447.01	0.819070	1.408471e-52	1.072850e-49
MsG0180003796.01	MsG0880047447.01	0.826844	2.170417e-54	2.059216e-51
MsG0180004299.01	MsG0880047447.01	0.802949	4.401667e-49	2.184307e-46
MsG0180004583.01	MsG0880047447.01	0.813086	3.057900e-51	1.977803e-48
MsG0180006133.01	MsG0880047447.01	0.814928	1.199900e-51	8.157969e-49
MsG0780040533.01	MsG0880047447.01	0.822018	2.964047e-53	2.451185e-50
MsG0780040620.01	MsG0880047447.01	0.834976	2.194840e-56	2.647186e-53
MsG0780040641.01	MsG0880047447.01	0.811978	5.341687e-51	3.354263e-48
MsG0780040828.01	MsG0880047447.01	0.803536	3.326154e-49	1.675773e-46
MsG0780041132.01	MsG0880047447.01	0.833449	5.300010e-56	6.105777e-53
MsG0780041143.01	MsG0880047447.01	0.856975	2.236056e-62	5.433196e-59
MsG0780041340.01	MsG0880047447.01	0.834540	2.825375e-56	3.363448e-53
MsG0780041359.01	MsG0880047447.01	0.810128	1.344780e-50	8.040292e-48
MsG0280010579.01	MsG0880047447.01	0.832216	1.073081e-55	1.191459e-52
MsG0280011154.01	MsG0880047447.01	0.806720	7.171404e-50	3.920708e-47
MsG0380012788.01	MsG0880047447.01	0.820636	6.178271e-53	4.914967e-50
MsG0380012808.01	MsG0880047447.01	0.810918	9.076158e-51	5.541973e-48
MsG0380013584.01	MsG0880047447.01	0.801426	9.056595e-49	4.323730e-46
MsG0680031701.01	MsG0880047447.01	0.826636	2.432896e-54	2.294523e-51
MsG0680032773.01	MsG0880047447.01	0.816237	6.133419e-52	4.322264e-49
MsG0680035350.01	MsG0880047447.01	0.804697	1.907447e-49	9.900990e-47
MsG0480018526.01	MsG0880047447.01	0.825245	5.207016e-54	4.720220e-51
MsG0480018785.01	MsG0880047447.01	0.838365	3.002526e-57	4.012620e-54
MsG0480020965.01	MsG0880047447.01	0.808825	2.560344e-50	1.478804e-47
MsG0480021901.01	MsG0880047447.01	0.824242	8.977071e-54	7.906795e-51
MsG0480022313.01	MsG0880047447.01	0.809165	2.164863e-50	1.261863e-47
MsG0480022559.01	MsG0880047447.01	0.822646	2.119100e-53	1.784351e-50
MsG0480022784.01	MsG0880047447.01	0.810644	1.040276e-50	6.305231e-48
MsG0480022991.01	MsG0880047447.01	0.808180	3.514406e-50	1.995991e-47
MsG0480023003.01	MsG0880047447.01	0.806776	6.979861e-50	3.821357e-47
MsG0480023194.01	MsG0880047447.01	0.820165	7.923077e-53	6.222211e-50
MsG0480023296.01	MsG0880047447.01	0.840095	1.068501e-57	1.506106e-54
MsG0480023458.01	MsG0880047447.01	0.801113	1.049516e-48	4.971252e-46
MsG0480023672.01	MsG0880047447.01	0.859003	5.583761e-63	1.452823e-59
MsG0580024748.01	MsG0880047447.01	0.824809	6.601599e-54	5.910702e-51
MsG0580024787.01	MsG0880047447.01	0.831391	1.714485e-55	1.857927e-52
MsG0580025093.01	MsG0880047447.01	0.801698	7.962607e-49	3.827587e-46
MsG0580025177.01	MsG0880047447.01	0.808060	3.727706e-50	2.110296e-47
MsG0580025775.01	MsG0880047447.01	0.829960	3.841999e-55	3.992358e-52
MsG0380015394.01	MsG0880047447.01	0.818693	1.715787e-52	1.293351e-49
MsG0380016225.01	MsG0880047447.01	0.803394	3.560501e-49	1.787179e-46
MsG0380016703.01	MsG0880047447.01	0.808086	3.680281e-50	2.084906e-47
MsG0380017164.01	MsG0880047447.01	0.840833	6.853976e-58	9.883530e-55
MsG0380017361.01	MsG0880047447.01	0.826589	2.497449e-54	2.352086e-51
MsG0380017605.01	MsG0880047447.01	0.805318	1.414749e-49	7.461638e-47
MsG0380017632.01	MsG0880047447.01	0.815097	1.100896e-51	7.519018e-49
MsG0480018397.01	MsG0880047447.01	0.805163	1.523951e-49	8.005797e-47
MsG0580028756.01	MsG0880047447.01	0.867370	1.439102e-65	5.012893e-62
MsG0580029102.01	MsG0880047447.01	0.816629	5.010864e-52	3.569226e-49
MsG0580029123.01	MsG0880047447.01	0.828690	7.815242e-55	7.824951e-52
MsG0580029261.01	MsG0880047447.01	0.823686	1.211704e-53	1.050817e-50
MsG0580029591.01	MsG0880047447.01	0.826791	2.234278e-54	2.116559e-51
MsG0280006540.01	MsG0880047447.01	0.871946	4.638968e-67	1.905546e-63
MsG0280006563.01	MsG0880047447.01	0.850431	1.705388e-60	3.340015e-57
MsG0280007359.01	MsG0880047447.01	0.853424	2.412228e-61	5.209981e-58
MsG0280009752.01	MsG0880047447.01	0.809715	1.650281e-50	9.761044e-48
MsG0680035878.01	MsG0880047447.01	0.808310	3.298097e-50	1.879477e-47
MsG0780037158.01	MsG0880047447.01	0.803930	2.756179e-49	1.402762e-46
MsG0780037741.01	MsG0880047447.01	0.813618	2.336030e-51	1.533049e-48
MsG0780038402.01	MsG0880047447.01	0.823187	1.585373e-53	1.355407e-50
MsG0780039861.01	MsG0880047447.01	0.871329	7.425987e-67	2.984158e-63

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880047447.01.T01	MTR_4g127620	56.489	262	70	4	62	279	476	737	2.07e-84	268
MsG0880047447.01.T01	MTR_4g127620	90.541	74	7	0	29	102	308	381	3.55e-36	137
MsG0880047447.01.T01	MTR_2g036920	41.091	275	99	8	62	276	651	922	9.07e-41	150
MsG0880047447.01.T01	MTR_2g036920	70.588	68	20	0	29	96	476	543	1.24e-23	100
MsG0880047447.01.T01	MTR_2g036920	41.091	275	99	8	62	276	622	893	1.10e-40	150
MsG0880047447.01.T01	MTR_2g036920	70.588	68	20	0	29	96	447	514	1.33e-23	100

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880047447.01.T01	AT2G19090	32.130	277	104	7	61	266	534	797	7.85e-34	130
MsG0880047447.01.T01	AT2G19090	68.519	54	17	0	43	96	372	425	9.06e-17	80.9
MsG0880047447.01.T01	AT4G30130	30.325	277	111	7	61	268	453	716	1.96e-30	120
MsG0880047447.01.T01	AT4G30130	57.143	70	29	1	33	102	280	348	6.64e-20	90.1
MsG0880047447.01.T01	AT4G30130	30.325	277	111	7	61	268	453	716	1.96e-30	120
MsG0880047447.01.T01	AT4G30130	57.143	70	29	1	33	102	280	348	6.64e-20	90.1
MsG0880047447.01.T01	AT4G30130	57.143	70	29	1	33	102	280	348	4.20e-20	90.5
MsG0880047447.01.T01	AT4G30130	57.143	70	29	1	33	102	280	348	4.20e-20	90.5

Find 69 sgRNAs with CRISPR-Local

Find 163 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATCGATTGCAATTTCTTTA+TGG	0.119576	8:-86475445	None:intergenic
CATCCATTTCTTCCTGTTCC+AGG	0.216684	8:-86475192	None:intergenic
CTCTTACTGTTGTGCATAGA+AGG	0.280645	8:-86477450	None:intergenic
GGATAAGTATTGAGCTTTCT+TGG	0.292019	8:-86475612	None:intergenic
AAACCGAAGGCCGGCAAATA+TGG	0.311425	8:+86475511	MsG0880047447.01.T01:CDS
ATCACTTCAGCCATATTTGC+CGG	0.325423	8:-86475521	None:intergenic
TCCTCATTCGGTTTCAAGAT+TGG	0.348712	8:-86477188	None:intergenic
ATCCCCTTCTAACGAACTTC+AGG	0.349140	8:+86475631	MsG0880047447.01.T01:CDS
AGTTATGGAGGTTGCTGTTA+AGG	0.351789	8:+86477548	MsG0880047447.01.T01:CDS
ATTTCTTCCTGTTCCAGGTC+TGG	0.356927	8:-86475187	None:intergenic
TCCTACATTCACGCACTAAC+TGG	0.370767	8:+86477251	MsG0880047447.01.T01:CDS
CTCGAACCTTCCTCAGTCCT+CGG	0.380939	8:-86475151	None:intergenic
CAGCCATATTTGCCGGCCTT+CGG	0.400928	8:-86475514	None:intergenic
AAATATGGCTGAAGTGATAA+AGG	0.406334	8:+86475526	MsG0880047447.01.T01:CDS
CAAACCTGAAGTTCGTTAGA+AGG	0.408987	8:-86475635	None:intergenic
TGATGTCTCGGCATTGTTAG+AGG	0.410848	8:+86475589	MsG0880047447.01.T01:CDS
AAGCACCGCTGTTTCTTGTA+AGG	0.413962	8:-86477393	None:intergenic
AGACCTGGAACAGGAAGAAA+TGG	0.440144	8:+86475189	MsG0880047447.01.T01:CDS
CTTGAAACCGAATGAGGAAC+TGG	0.447830	8:+86477193	MsG0880047447.01.T01:CDS
GGTTTCGCCAGTTCCTCATT+CGG	0.451309	8:-86477200	None:intergenic
TAAGGTTGGAGAAGAAGTTA+TGG	0.455241	8:+86477533	MsG0880047447.01.T01:intron
AATGCCAGCTATAAGAATCT+TGG	0.459727	8:-86477105	None:intergenic
CAATGAACTTGTTAAACAAT+GGG	0.462956	8:+86477642	MsG0880047447.01.T01:CDS
GGCTTTGTGTTCAGTGGTCA+AGG	0.472805	8:+86477360	MsG0880047447.01.T01:CDS
GGCTGAGCGTGCAGCCTGTA+TGG	0.475929	8:-86477164	None:intergenic
AGGGATACCAGACCTGGAAC+AGG	0.482435	8:+86475180	MsG0880047447.01.T01:CDS
TAACAATGCCGAGACATCAT+TGG	0.485532	8:-86475585	None:intergenic
TCATTCGGTTTCAAGATTGG+AGG	0.501130	8:-86477185	None:intergenic
CATATTAACTTAGATGCATC+GGG	0.502954	8:-86477302	None:intergenic
CTGTTAAGGTACTCTGTGGT+GGG	0.506379	8:+86477562	MsG0880047447.01.T01:CDS
AAGTTCATTGTATCCCTTAG+CGG	0.512351	8:-86477629	None:intergenic
GCTGTTAAGGTACTCTGTGG+TGG	0.514362	8:+86477561	MsG0880047447.01.T01:CDS
GCATATTAACTTAGATGCAT+CGG	0.523698	8:-86477303	None:intergenic
ACATTCACGCACTAACTGGC+TGG	0.524842	8:+86477255	MsG0880047447.01.T01:CDS
GGTTGGAGAAGAAGTTATGG+AGG	0.530749	8:+86477536	MsG0880047447.01.T01:intron
AAACCTGAAGTTCGTTAGAA+GGG	0.534689	8:-86475634	None:intergenic
GTTTGCTATTGACTCCGCTA+AGG	0.535922	8:+86477615	MsG0880047447.01.T01:CDS
CACTGAACACAAAGCCAACA+CGG	0.541745	8:-86477353	None:intergenic
CGTGTTGGCTTTGTGTTCAG+TGG	0.542116	8:+86477354	MsG0880047447.01.T01:CDS
ACAATGAACTTGTTAAACAA+TGG	0.543788	8:+86477641	MsG0880047447.01.T01:CDS
GAGGAAGGTTCGAGAAGAAG+AGG	0.544549	8:+86475160	MsG0880047447.01.T01:CDS
TGAGTAGAGCTAGACCTTCG+AGG	0.546467	8:-86477329	None:intergenic
CAATGCAGCCAATGATGTCT+CGG	0.552658	8:+86475577	MsG0880047447.01.T01:CDS
ACGTCGATAACGATCCATAC+AGG	0.554819	8:+86477150	MsG0880047447.01.T01:CDS
TTTGCTATTGACTCCGCTAA+GGG	0.566353	8:+86477616	MsG0880047447.01.T01:CDS
TCCAATCTTGAAACCGAATG+AGG	0.567486	8:+86477187	MsG0880047447.01.T01:CDS
GCCAGTTAGTGCGTGAATGT+AGG	0.569376	8:-86477252	None:intergenic
AATCGATACTGAAGAAGCTA+AGG	0.570210	8:+86475460	MsG0880047447.01.T01:CDS
TGTTTATGTAAACCGAAGGC+CGG	0.574887	8:+86475502	MsG0880047447.01.T01:CDS
GAAGTGATCCATGACTCAAA+AGG	0.575146	8:-86477221	None:intergenic
GAGAAACCGAGGACTGAGGA+AGG	0.576981	8:+86475145	MsG0880047447.01.T01:CDS
GAAGCCAAGATTCTTATAGC+TGG	0.577857	8:+86477101	MsG0880047447.01.T01:CDS
CAAAACACAGAAGCAAACAT+TGG	0.583788	8:+86477076	MsG0880047447.01.T01:intron
AGTTAATATGCTCTCCTCGA+AGG	0.586136	8:+86477315	MsG0880047447.01.T01:CDS
TTACTGTTTATGTAAACCGA+AGG	0.590995	8:+86475498	MsG0880047447.01.T01:CDS
GTCAAGTGCTATGAGCTCAA+TGG	0.592133	8:+86477588	MsG0880047447.01.T01:CDS
AAGAAATGGATGAAACAAGA+AGG	0.594832	8:+86475203	MsG0880047447.01.T01:CDS
AGGAAGGTTCGAGAAGAAGA+GGG	0.605530	8:+86475161	MsG0880047447.01.T01:CDS
CTAGCTCTACTCACCCGTGT+TGG	0.614179	8:+86477339	MsG0880047447.01.T01:CDS
AAGAAGAGGGATACCAGACC+TGG	0.618963	8:+86475174	MsG0880047447.01.T01:CDS
AACCTGAAGTTCGTTAGAAG+GGG	0.630344	8:-86475633	None:intergenic
ACTGAACACAAAGCCAACAC+GGG	0.660346	8:-86477352	None:intergenic
GGATGAGAAACCGAGGACTG+AGG	0.669837	8:+86475141	MsG0880047447.01.T01:CDS
GAAGCTAAGGAAGAAACACC+TGG	0.678158	8:+86475473	MsG0880047447.01.T01:CDS
TTTACATAAACAGTAAAACC+AGG	0.706181	8:-86475491	None:intergenic
GTTGCTGTTAAGGTACTCTG+TGG	0.721032	8:+86477558	MsG0880047447.01.T01:CDS
ATGTTATGGATGAGAAACCG+AGG	0.721286	8:+86475134	None:intergenic
AGATGCCTTACAAGAAACAG+CGG	0.730541	8:+86477388	MsG0880047447.01.T01:CDS
GAAGTTGCAGCAAAATTGTG+AGG	0.741434	8:+86477672	MsG0880047447.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTCATACTATATTATAAT+AGG	+	Chr8:86476231-86476250	MsG0880047447.01.T01:intron	10.0%
!!!	AAATTTGTTATAATTTTTGA+CGG	-	Chr8:86475943-86475962	None:intergenic	10.0%
!!	TATGGTTAAAAATAACATAA+AGG	-	Chr8:86476580-86476599	None:intergenic	15.0%
!!!	AATTTGTTATAATTTTTGAC+GGG	-	Chr8:86475942-86475961	None:intergenic	15.0%
!!!	ATAACAAATTTTCAAAAACT+AGG	+	Chr8:86475952-86475971	MsG0880047447.01.T01:intron	15.0%
!!!	TAACAAATTTTCAAAAACTA+GGG	+	Chr8:86475953-86475972	MsG0880047447.01.T01:intron	15.0%
!!	ATAAATTCAATTGTTGAAGT+TGG	-	Chr8:86476152-86476171	None:intergenic	20.0%
!!	ATTCTGATATATACAAATAC+AGG	+	Chr8:86477017-86477036	MsG0880047447.01.T01:intron	20.0%
!!	TAAGATATATCACACTATAT+TGG	+	Chr8:86476964-86476983	MsG0880047447.01.T01:intron	20.0%
!!	TTAGAATACATAGCATAATT+GGG	+	Chr8:86476722-86476741	MsG0880047447.01.T01:intron	20.0%
!!!	ACGTTTTTTAATATGAATGT+CGG	-	Chr8:86476621-86476640	None:intergenic	20.0%
!!!	ATTTGTTATAATTTTTGACG+GGG	-	Chr8:86475941-86475960	None:intergenic	20.0%
!!!	GAAAAATACTGTGTTTTTAA+CGG	+	Chr8:86476906-86476925	MsG0880047447.01.T01:intron	20.0%
!!!	TTTAGAATACATAGCATAAT+TGG	+	Chr8:86476721-86476740	MsG0880047447.01.T01:intron	20.0%
!	AAATAGGTATATAACCTTCT+AGG	-	Chr8:86476788-86476807	None:intergenic	25.0%
!	AATAGGTATATAACCTTCTA+GGG	-	Chr8:86476787-86476806	None:intergenic	25.0%
!	TAGAATACATAGCATAATTG+GGG	+	Chr8:86476723-86476742	MsG0880047447.01.T01:intron	25.0%
!	TTTACATAAACAGTAAAACC+AGG	-	Chr8:86475494-86475513	None:intergenic	25.0%
!!	AGAAGGTTATATACCTATTT+TGG	+	Chr8:86476788-86476807	MsG0880047447.01.T01:intron	25.0%
!!	TATCGATTGCAATTTCTTTA+TGG	-	Chr8:86475448-86475467	None:intergenic	25.0%
!!	TGAAGATGTTGATAAACATA+AGG	+	Chr8:86475298-86475317	MsG0880047447.01.T01:intron	25.0%
!!!	ACAATGAACTTGTTAAACAA+TGG	+	Chr8:86477641-86477660	MsG0880047447.01.T01:CDS	25.0%
!!!	CAATGAACTTGTTAAACAAT+GGG	+	Chr8:86477642-86477661	MsG0880047447.01.T01:CDS	25.0%
	AAATATGGCTGAAGTGATAA+AGG	+	Chr8:86475526-86475545	MsG0880047447.01.T01:CDS	30.0%
	AACAAAACTTTGATGTCGTT+TGG	+	Chr8:86475773-86475792	MsG0880047447.01.T01:intron	30.0%
	AAGAAATGGATGAAACAAGA+AGG	+	Chr8:86475203-86475222	MsG0880047447.01.T01:CDS	30.0%
	AGATTCTGCACAAAATACAA+CGG	+	Chr8:86477474-86477493	MsG0880047447.01.T01:intron	30.0%
	AGTATCAAAATCTCAATCTC+AGG	+	Chr8:86475409-86475428	MsG0880047447.01.T01:intron	30.0%
	AGTGTGTTAGAAATTTGAAG+GGG	-	Chr8:86476548-86476567	None:intergenic	30.0%
	ATATCAGACTCGAAAATCAA+TGG	+	Chr8:86475372-86475391	MsG0880047447.01.T01:intron	30.0%
	ATCTGACACATATTGGAATT+TGG	+	Chr8:86476648-86476667	MsG0880047447.01.T01:intron	30.0%
	ATTAGACAGGTTATATGCAT+GGG	+	Chr8:86476037-86476056	MsG0880047447.01.T01:intron	30.0%
	ATTATTATACCTTGACTTCC+TGG	-	Chr8:86476076-86476095	None:intergenic	30.0%
	CAGTGTGTTAGAAATTTGAA+GGG	-	Chr8:86476549-86476568	None:intergenic	30.0%
	CATATTAACTTAGATGCATC+GGG	-	Chr8:86477305-86477324	None:intergenic	30.0%
	GATTTATACTCATCAGTTAG+AGG	-	Chr8:86476111-86476130	None:intergenic	30.0%
	GCATATTAACTTAGATGCAT+CGG	-	Chr8:86477306-86477325	None:intergenic	30.0%
	TTACTGTTTATGTAAACCGA+AGG	+	Chr8:86475498-86475517	MsG0880047447.01.T01:CDS	30.0%
!	AGATGTTGATAAACATAAGG+AGG	+	Chr8:86475301-86475320	MsG0880047447.01.T01:intron	30.0%
!	GATATTTTCTGCACAGTTTT+CGG	-	Chr8:86475357-86475376	None:intergenic	30.0%
!!	TCTGGTTTCTGATTTTTACA+TGG	+	Chr8:86476884-86476903	MsG0880047447.01.T01:intron	30.0%
!!!	CATCATTTTGGTTCTTTCTT+CGG	-	Chr8:86475251-86475270	None:intergenic	30.0%
	AAACCTGAAGTTCGTTAGAA+GGG	-	Chr8:86475637-86475656	None:intergenic	35.0%
	AAGAATGTGCAGTTTCGTTT+AGG	-	Chr8:86476842-86476861	None:intergenic	35.0%
	AAGTTCATTGTATCCCTTAG+CGG	-	Chr8:86477632-86477651	None:intergenic	35.0%
	AATCGATACTGAAGAAGCTA+AGG	+	Chr8:86475460-86475479	MsG0880047447.01.T01:CDS	35.0%
	AATCTCAATCTCAGGTCATA+TGG	+	Chr8:86475417-86475436	MsG0880047447.01.T01:intron	35.0%
	AATGCCAGCTATAAGAATCT+TGG	-	Chr8:86477108-86477127	None:intergenic	35.0%
	ACTGAGGAACCATGATATAA+AGG	+	Chr8:86476332-86476351	MsG0880047447.01.T01:intron	35.0%
	AGTTTATGATGATCCATCAG+AGG	+	Chr8:86475980-86475999	MsG0880047447.01.T01:intron	35.0%
	ATAACCTGTCTAATGTTGAC+TGG	-	Chr8:86476031-86476050	None:intergenic	35.0%
	CAAAACACAGAAGCAAACAT+TGG	+	Chr8:86477076-86477095	MsG0880047447.01.T01:intron	35.0%
	CAAAAGTTCTGCACCAAAAT+AGG	-	Chr8:86476804-86476823	None:intergenic	35.0%
	CAGTTTCGTTTAGGTAAGAA+GGG	-	Chr8:86476833-86476852	None:intergenic	35.0%
	CATTAGACAGGTTATATGCA+TGG	+	Chr8:86476036-86476055	MsG0880047447.01.T01:intron	35.0%
	CCAATGTGAATATGGAAATG+TGG	+	Chr8:86477503-86477522	MsG0880047447.01.T01:intron	35.0%
	CCACATTTCCATATTCACAT+TGG	-	Chr8:86477506-86477525	None:intergenic	35.0%
	CGTATCTATTTGTGAGTTTC+AGG	+	Chr8:86475848-86475867	MsG0880047447.01.T01:intron	35.0%
	CTTGAGTATCTGACACATAT+TGG	+	Chr8:86476641-86476660	MsG0880047447.01.T01:intron	35.0%
	GCAGTGTGTTAGAAATTTGA+AGG	-	Chr8:86476550-86476569	None:intergenic	35.0%
	TAAGGTTGGAGAAGAAGTTA+TGG	+	Chr8:86477533-86477552	MsG0880047447.01.T01:intron	35.0%
	TGATTGTTATGCGTCATATC+TGG	+	Chr8:86476866-86476885	MsG0880047447.01.T01:intron	35.0%
	TGCTACATTGAGTGATGATA+TGG	-	Chr8:86476598-86476617	None:intergenic	35.0%
!	TGGAGGAGTTTACATCATTT+TGG	-	Chr8:86475263-86475282	None:intergenic	35.0%
!!	GGATAAGTATTGAGCTTTCT+TGG	-	Chr8:86475615-86475634	None:intergenic	35.0%
!!	TAACCTTCTAGGGTACTTTA+TGG	-	Chr8:86476777-86476796	None:intergenic	35.0%
!!	TGTTTGCTTCTGTGTTTTGA+TGG	-	Chr8:86477075-86477094	None:intergenic	35.0%
!!!	GATTTTTTCGCAGCTGAATT+AGG	+	Chr8:86477425-86477444	MsG0880047447.01.T01:CDS	35.0%
	AACACCAATGTTTCCTCTGA+TGG	-	Chr8:86475996-86476015	None:intergenic	40.0%
	AACCTGAAGTTCGTTAGAAG+GGG	-	Chr8:86475636-86475655	None:intergenic	40.0%
	AAGGAGGAAGAGAAAGAGAA+GGG	+	Chr8:86475317-86475336	MsG0880047447.01.T01:intron	40.0%
	AATACAGGCTAGCAAAGATG+TGG	+	Chr8:86477032-86477051	MsG0880047447.01.T01:intron	40.0%
	AATGTGGAAGTTGCTAAGGT+TGG	+	Chr8:86477519-86477538	MsG0880047447.01.T01:intron	40.0%
	AGAAGAAATGTCTGCAACTG+AGG	+	Chr8:86476316-86476335	MsG0880047447.01.T01:intron	40.0%
	AGATACGAGTGAACGCAAAA+TGG	-	Chr8:86475835-86475854	None:intergenic	40.0%
	AGATGCCTTACAAGAAACAG+CGG	+	Chr8:86477388-86477407	MsG0880047447.01.T01:CDS	40.0%
	AGCAAAGATGTGGAAAGTGA+TGG	+	Chr8:86477042-86477061	MsG0880047447.01.T01:intron	40.0%
	AGTTAATATGCTCTCCTCGA+AGG	+	Chr8:86477315-86477334	MsG0880047447.01.T01:CDS	40.0%
	ATCACTTCAGCCATATTTGC+CGG	-	Chr8:86475524-86475543	None:intergenic	40.0%
	CAAACCTGAAGTTCGTTAGA+AGG	-	Chr8:86475638-86475657	None:intergenic	40.0%
	CTCTTACTGTTGTGCATAGA+AGG	-	Chr8:86477453-86477472	None:intergenic	40.0%
	CTTCAACCATGACTTCTTCT+TGG	-	Chr8:86475283-86475302	None:intergenic	40.0%
	GAAGCCAAGATTCTTATAGC+TGG	+	Chr8:86477101-86477120	MsG0880047447.01.T01:CDS	40.0%
	GAAGTGATCCATGACTCAAA+AGG	-	Chr8:86477224-86477243	None:intergenic	40.0%
	GAAGTTGCAGCAAAATTGTG+AGG	+	Chr8:86477672-86477691	MsG0880047447.01.T01:CDS	40.0%
	GCAGTTTCGTTTAGGTAAGA+AGG	-	Chr8:86476834-86476853	None:intergenic	40.0%
	GGAACCATGATATAAAGGAG+AGG	+	Chr8:86476337-86476356	MsG0880047447.01.T01:intron	40.0%
	GGTTCCTCTCCTTTATATCA+TGG	-	Chr8:86476344-86476363	None:intergenic	40.0%
	GGTTGGATCCAATGTGAATA+TGG	+	Chr8:86477495-86477514	MsG0880047447.01.T01:intron	40.0%
	GTTCCTGACTGTTGAAAAGA+AGG	-	Chr8:86476276-86476295	None:intergenic	40.0%
	TAACAATGCCGAGACATCAT+TGG	-	Chr8:86475588-86475607	None:intergenic	40.0%
	TAAGGAGGAAGAGAAAGAGA+AGG	+	Chr8:86475316-86475335	MsG0880047447.01.T01:intron	40.0%
	TCAGACTCGAAAATCAATGG+CGG	+	Chr8:86475375-86475394	MsG0880047447.01.T01:intron	40.0%
	TCATTCGGTTTCAAGATTGG+AGG	-	Chr8:86477188-86477207	None:intergenic	40.0%
	TCCAATCTTGAAACCGAATG+AGG	+	Chr8:86477187-86477206	MsG0880047447.01.T01:CDS	40.0%
	TCCTCATTCGGTTTCAAGAT+TGG	-	Chr8:86477191-86477210	None:intergenic	40.0%
	TCTGCACAAAATACAACGGT+TGG	+	Chr8:86477478-86477497	MsG0880047447.01.T01:intron	40.0%
	TGATCCATCAGAGGAAACAT+TGG	+	Chr8:86475989-86476008	MsG0880047447.01.T01:intron	40.0%
	TGGAAATGTGGAAGTTGCTA+AGG	+	Chr8:86477515-86477534	MsG0880047447.01.T01:intron	40.0%
	TGTTTATGTAAACCGAAGGC+CGG	+	Chr8:86475502-86475521	MsG0880047447.01.T01:CDS	40.0%
!	ACTCAGTTGAAGCTATTTCC+AGG	+	Chr8:86476429-86476448	MsG0880047447.01.T01:intron	40.0%
!	AGTTATGGAGGTTGCTGTTA+AGG	+	Chr8:86477548-86477567	MsG0880047447.01.T01:CDS	40.0%
!	CAATTGTTGAAGTTGGTCTC+TGG	-	Chr8:86476145-86476164	None:intergenic	40.0%
!	CTTCTAACGAACTTCAGGTT+TGG	+	Chr8:86475636-86475655	MsG0880047447.01.T01:intron	40.0%
!	TCACCTTCTTTTCAACAGTC+AGG	+	Chr8:86476270-86476289	MsG0880047447.01.T01:intron	40.0%
!	TGTCCATAAAGTACCCTAGA+AGG	+	Chr8:86476771-86476790	MsG0880047447.01.T01:intron	40.0%
!!	GACGTAGAAGACTGTTTTTC+TGG	-	Chr8:86477135-86477154	None:intergenic	40.0%
!!	TTTGCTATTGACTCCGCTAA+GGG	+	Chr8:86477616-86477635	MsG0880047447.01.T01:CDS	40.0%
!!!	CTTGTTTTATCCACAGACGA+AGG	-	Chr8:86476365-86476384	None:intergenic	40.0%
	AACAGTCAGGAACACGTGTT+CGG	+	Chr8:86476283-86476302	MsG0880047447.01.T01:intron	45.0%
	ACGTCGATAACGATCCATAC+AGG	+	Chr8:86477150-86477169	MsG0880047447.01.T01:CDS	45.0%
	ACTCCTCCAAGAAGAAGTCA+TGG	+	Chr8:86475274-86475293	MsG0880047447.01.T01:intron	45.0%
	ACTGAACACAAAGCCAACAC+GGG	-	Chr8:86477355-86477374	None:intergenic	45.0%
	AGACCTGGAACAGGAAGAAA+TGG	+	Chr8:86475189-86475208	MsG0880047447.01.T01:CDS	45.0%
	AGGAAGGTTCGAGAAGAAGA+GGG	+	Chr8:86475161-86475180	MsG0880047447.01.T01:CDS	45.0%
	ATCCCCTTCTAACGAACTTC+AGG	+	Chr8:86475631-86475650	MsG0880047447.01.T01:CDS	45.0%
	ATTTCTTCCTGTTCCAGGTC+TGG	-	Chr8:86475190-86475209	None:intergenic	45.0%
	CAACCATGACTTCTTCTTGG+AGG	-	Chr8:86475280-86475299	None:intergenic	45.0%
	CAATGCAGCCAATGATGTCT+CGG	+	Chr8:86475577-86475596	MsG0880047447.01.T01:CDS	45.0%
	CACTGAACACAAAGCCAACA+CGG	-	Chr8:86477356-86477375	None:intergenic	45.0%
	CAGCTTCTTGATTGCTGCAA+GGG	+	Chr8:86476487-86476506	MsG0880047447.01.T01:intron	45.0%
	CATCCATTTCTTCCTGTTCC+AGG	-	Chr8:86475195-86475214	None:intergenic	45.0%
	CCAGGAGAATTGAACCTTGA+GGG	+	Chr8:86476447-86476466	MsG0880047447.01.T01:intron	45.0%
	CTTGAAACCGAATGAGGAAC+TGG	+	Chr8:86477193-86477212	MsG0880047447.01.T01:CDS	45.0%
	CTTGCAGCAATCAAGAAGCT+GGG	-	Chr8:86476488-86476507	None:intergenic	45.0%
	GAAGCTAAGGAAGAAACACC+TGG	+	Chr8:86475473-86475492	MsG0880047447.01.T01:CDS	45.0%
	GGTTGGAGAAGAAGTTATGG+AGG	+	Chr8:86477536-86477555	MsG0880047447.01.T01:intron	45.0%
	GTCAAGTGCTATGAGCTCAA+TGG	+	Chr8:86477588-86477607	MsG0880047447.01.T01:CDS	45.0%
	GTCACCAGTCAACATTAGAC+AGG	+	Chr8:86476024-86476043	MsG0880047447.01.T01:intron	45.0%
	TCCAGGAGAATTGAACCTTG+AGG	+	Chr8:86476446-86476465	MsG0880047447.01.T01:intron	45.0%
	TCCTACATTCACGCACTAAC+TGG	+	Chr8:86477251-86477270	MsG0880047447.01.T01:CDS	45.0%
	TGATGTCTCGGCATTGTTAG+AGG	+	Chr8:86475589-86475608	MsG0880047447.01.T01:CDS	45.0%
!	CTAACGAACTTCAGGTTTGG+TGG	+	Chr8:86475639-86475658	MsG0880047447.01.T01:intron	45.0%
!	CTGTTAAGGTACTCTGTGGT+GGG	+	Chr8:86477562-86477581	MsG0880047447.01.T01:CDS	45.0%
!	GTTGCTGTTAAGGTACTCTG+TGG	+	Chr8:86477558-86477577	MsG0880047447.01.T01:CDS	45.0%
!!	AAGCACCGCTGTTTCTTGTA+AGG	-	Chr8:86477396-86477415	None:intergenic	45.0%
!!	GTTTGCTATTGACTCCGCTA+AGG	+	Chr8:86477615-86477634	MsG0880047447.01.T01:CDS	45.0%
!!	TGGCGAAACCTTTTGAGTCA+TGG	+	Chr8:86477213-86477232	MsG0880047447.01.T01:CDS	45.0%
	AAACCGAAGGCCGGCAAATA+TGG	+	Chr8:86475511-86475530	MsG0880047447.01.T01:CDS	50.0%
	AAGAAGAGGGATACCAGACC+TGG	+	Chr8:86475174-86475193	MsG0880047447.01.T01:CDS	50.0%
	ACATTCACGCACTAACTGGC+TGG	+	Chr8:86477255-86477274	MsG0880047447.01.T01:CDS	50.0%
	ATGGGAGAAGAAGCTCTACC+AGG	+	Chr8:86476055-86476074	MsG0880047447.01.T01:intron	50.0%
	CCAGCTTCTTGATTGCTGCA+AGG	+	Chr8:86476486-86476505	MsG0880047447.01.T01:intron	50.0%
	CCCTCAAGGTTCAATTCTCC+TGG	-	Chr8:86476450-86476469	None:intergenic	50.0%
	CCTTGCAGCAATCAAGAAGC+TGG	-	Chr8:86476489-86476508	None:intergenic	50.0%
	GAAGCTCTACCAGGAAGTCA+AGG	+	Chr8:86476064-86476083	MsG0880047447.01.T01:intron	50.0%
	GAGGAAGGTTCGAGAAGAAG+AGG	+	Chr8:86475160-86475179	MsG0880047447.01.T01:CDS	50.0%
	GCCAGTTAGTGCGTGAATGT+AGG	-	Chr8:86477255-86477274	None:intergenic	50.0%
	GGTTTCGCCAGTTCCTCATT+CGG	-	Chr8:86477203-86477222	None:intergenic	50.0%
	GTGCAACTCTTCATCCCTCA+AGG	-	Chr8:86476464-86476483	None:intergenic	50.0%
	TGAGTAGAGCTAGACCTTCG+AGG	-	Chr8:86477332-86477351	None:intergenic	50.0%
!	GCTGTTAAGGTACTCTGTGG+TGG	+	Chr8:86477561-86477580	MsG0880047447.01.T01:CDS	50.0%
!	GGCTTTGTGTTCAGTGGTCA+AGG	+	Chr8:86477360-86477379	MsG0880047447.01.T01:CDS	50.0%
!!	CGTGTTGGCTTTGTGTTCAG+TGG	+	Chr8:86477354-86477373	MsG0880047447.01.T01:CDS	50.0%
	AGGAGAGGAACCTTCGTCTG+TGG	+	Chr8:86476352-86476371	MsG0880047447.01.T01:intron	55.0%
	AGGGATACCAGACCTGGAAC+AGG	+	Chr8:86475180-86475199	MsG0880047447.01.T01:CDS	55.0%
	CAGCCATATTTGCCGGCCTT+CGG	-	Chr8:86475517-86475536	None:intergenic	55.0%
	CTCGAACCTTCCTCAGTCCT+CGG	-	Chr8:86475154-86475173	None:intergenic	55.0%
	GAGAAACCGAGGACTGAGGA+AGG	+	Chr8:86475145-86475164	MsG0880047447.01.T01:CDS	55.0%
	GGACGAGCGAAAAGAGCTAC+TGG	-	Chr8:86475920-86475939	None:intergenic	55.0%
	GGATGAGAAACCGAGGACTG+AGG	+	Chr8:86475141-86475160	MsG0880047447.01.T01:CDS	55.0%
!!	CTAGCTCTACTCACCCGTGT+TGG	+	Chr8:86477339-86477358	MsG0880047447.01.T01:CDS	55.0%
	GGCTGAGCGTGCAGCCTGTA+TGG	-	Chr8:86477167-86477186	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	86475139	86477714	86475139	ID=MsG0880047447.01;Name=MsG0880047447.01
Chr8	mRNA	86475139	86477714	86475139	ID=MsG0880047447.01.T01;Parent=MsG0880047447.01;Name=MsG0880047447.01.T01;_AED=0.34;_eAED=0.35;_QI=0\|0\|0\|1\|0.66\|0.75\|4\|0\|283
Chr8	exon	86475139	86475224	86475139	ID=MsG0880047447.01.T01:exon:17858;Parent=MsG0880047447.01.T01
Chr8	exon	86475445	86475652	86475445	ID=MsG0880047447.01.T01:exon:17859;Parent=MsG0880047447.01.T01
Chr8	exon	86477086	86477465	86477086	ID=MsG0880047447.01.T01:exon:17860;Parent=MsG0880047447.01.T01
Chr8	exon	86477537	86477714	86477537	ID=MsG0880047447.01.T01:exon:17861;Parent=MsG0880047447.01.T01
Chr8	CDS	86475139	86475224	86475139	ID=MsG0880047447.01.T01:cds;Parent=MsG0880047447.01.T01
Chr8	CDS	86475445	86475652	86475445	ID=MsG0880047447.01.T01:cds;Parent=MsG0880047447.01.T01
Chr8	CDS	86477086	86477465	86477086	ID=MsG0880047447.01.T01:cds;Parent=MsG0880047447.01.T01
Chr8	CDS	86477537	86477714	86477537	ID=MsG0880047447.01.T01:cds;Parent=MsG0880047447.01.T01

Gene Sequence

>MsG0880047447.01.T01

ATGGATGAGAAACCGAGGACTGAGGAAGGTTCGAGAAGAAGAGGGATACCAGACCTGGAACAGGAAGAAATGGATGAAACAAGAAGCCATAAAGAAATTGCAATCGATACTGAAGAAGCTAAGGAAGAAACACCTGGTTTTACTGTTTATGTAAACCGAAGGCCGGCAAATATGGCTGAAGTGATAAAGGATCTTGAATCTCAATTCACAGTTGTCTGCAATGCAGCCAATGATGTCTCGGCATTGTTAGAGGCCAAGAAAGCTCAATACTTATCCCCTTCTAACGAACTTCAGAAGCAAACATTGGACGAAGCCAAGATTCTTATAGCTGGCATTGATGCCAGAAAAACAGTCTTCTACGTCGATAACGATCCATACAGGCTGCACGCTCAGCCTCCAATCTTGAAACCGAATGAGGAACTGGCGAAACCTTTTGAGTCATGGATCACTTCTCAGAAATCCTACATTCACGCACTAACTGGCTGGCTTCTTAGATGCATGAGATGTGAGCCCGATGCATCTAAGTTAATATGCTCTCCTCGAAGGTCTAGCTCTACTCACCCGTGTTGGCTTTGTGTTCAGTGGTCAAGGCGTCTAGATGCCTTACAAGAAACAGCGGTGCTTGATAGCATAGATTTTTTCGCAGCTGAATTAGGATCCTTCTATGCACAACAGTTGGAGAAGAAGTTATGGAGGTTGCTGTTAAGGTACTCTGTGGTGGGAATGTCAAGTGCTATGAGCTCAATGGCAGAGTTTGCTATTGACTCCGCTAAGGGATACAATGAACTTGTTAAACAATGGGAGAATGTGAAGTTGCAGCAAAATTGTGAGGCTGCAAATGAATACAAATGA

Protein sequence

>MsG0880047447.01.T01

MDEKPRTEEGSRRRGIPDLEQEEMDETRSHKEIAIDTEEAKEETPGFTVYVNRRPANMAEVIKDLESQFTVVCNAANDVSALLEAKKAQYLSPSNELQKQTLDEAKILIAGIDARKTVFYVDNDPYRLHAQPPILKPNEELAKPFESWITSQKSYIHALTGWLLRCMRCEPDASKLICSPRRSSSTHPCWLCVQWSRRLDALQETAVLDSIDFFAAELGSFYAQQLEKKLWRLLLRYSVVGMSSAMSSMAEFAIDSAKGYNELVKQWENVKLQQNCEAANEYK*