AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047649.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047649.01.T01 MTR_4g132160 91.057 861 73 2 1 857 1 861 0.0 1540
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047649.01.T01 AT1G16630 29.073 939 424 43 20 850 34 838 9.53e-46 177
MsG0880047649.01.T01 AT2G16270 32.591 494 202 22 8 470 12 405 2.23e-39 157
MsG0880047649.01.T01 AT2G16270 70.000 50 11 2 805 850 701 750 7.32e-11 66.6

Find 187 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTCTCAATTCAATTCTT+AGG 0.105616 8:+89187784 MsG0880047649.01.T01:five_prime_UTR
GAAAATGATGTTAAATTAAT+TGG 0.132466 8:+89189953 MsG0880047649.01.T01:CDS
ACTTCTTCGCATGGGGTTAA+TGG 0.237962 8:-89187976 None:intergenic
TTCCTCATAGATGGCTTATC+TGG 0.244401 8:-89190274 None:intergenic
ATTTCGATGGATGAGTATTT+TGG 0.246831 8:+89189512 MsG0880047649.01.T01:CDS
GTTTCTGAATTTCTTGGATT+AGG 0.259148 8:-89187954 None:intergenic
TGAAAGAAAGATTAGGAAAA+TGG 0.265822 8:-89187867 None:intergenic
TCGTTCGGAATTCGCATATT+TGG 0.274234 8:+89189291 MsG0880047649.01.T01:CDS
TTTCTGAATTTCTTGGATTA+GGG 0.289901 8:-89187953 None:intergenic
GTTGATACTGGTTCATTAGA+TGG 0.302929 8:+89188456 MsG0880047649.01.T01:CDS
CATCCTCCGATGATTCCTTC+TGG 0.310532 8:-89188956 None:intergenic
TCTAATTCCATTAGCGGCTT+TGG 0.321351 8:-89188864 None:intergenic
ATTAGGAAAATGGATGAATT+AGG 0.324760 8:-89187857 None:intergenic
GATCATCAGCCCTTGGTGTT+TGG 0.342756 8:-89189850 None:intergenic
TTATGAGTCTTCTGAACTTT+CGG 0.349539 8:+89189208 MsG0880047649.01.T01:CDS
TTAATGGTTTCTGAATTTCT+TGG 0.349999 8:-89187960 None:intergenic
GGGTTTGATGAATTTGAAAC+TGG 0.350216 8:-89187933 None:intergenic
AGAACAACTTCAGCATGATA+TGG 0.356822 8:+89189568 MsG0880047649.01.T01:CDS
GTGTGAGAGAAACTAGATCT+AGG 0.366345 8:-89188044 None:intergenic
TTACAAACCAAAGCCGCTAA+TGG 0.368219 8:+89188857 MsG0880047649.01.T01:CDS
GGTCGCGGTGAAAATAAAAT+AGG 0.371380 8:+89189446 MsG0880047649.01.T01:CDS
GACACAGATGCTGCAATTAG+AGG 0.373147 8:+89190064 MsG0880047649.01.T01:CDS
CTGATCCTTTAGAACAGAAA+AGG 0.377539 8:+89188433 MsG0880047649.01.T01:CDS
TTTCTGAACAAAGTCCTGTT+AGG 0.378281 8:+89189018 MsG0880047649.01.T01:CDS
TTGTCCTCAGATCCAATCTT+AGG 0.380737 8:-89190241 None:intergenic
TAGAAATACATTCACATTGC+AGG 0.381988 8:-89190744 None:intergenic
ATCTCTCAATTCAATTCTTA+GGG 0.383836 8:+89187785 MsG0880047649.01.T01:five_prime_UTR
GAGTTGATTTCAGATGTTAG+AGG 0.389002 8:+89189341 MsG0880047649.01.T01:CDS
GAATCATTGTTTAGAATCAT+AGG 0.390137 8:-89188597 None:intergenic
GCTGGCGATCTAACCTTTGC+CGG 0.391178 8:-89188258 None:intergenic
TCAAGTTAAAGTACTGCAAC+TGG 0.391552 8:-89189379 None:intergenic
GTTAATCAGAGTCCTATCTT+TGG 0.391685 8:+89189425 MsG0880047649.01.T01:CDS
TTAGGCGTTCAAGTAGGATT+AGG 0.395224 8:+89190645 MsG0880047649.01.T01:CDS
ACAGGCACATTCCTCATAGA+TGG 0.401315 8:-89190283 None:intergenic
GCCTCTTCTGACTACTCCAT+GGG 0.407211 8:+89190445 MsG0880047649.01.T01:CDS
GAACAGAAAAGGGTTGATAC+TGG 0.407790 8:+89188444 MsG0880047649.01.T01:CDS
ATCCTCCGATGATTCCTTCT+GGG 0.408425 8:-89188955 None:intergenic
GCAACGTGTGTTTCTTGAAC+AGG 0.414525 8:-89189482 None:intergenic
AAATATGCCAAGTTCAAATT+CGG 0.415242 8:+89189877 MsG0880047649.01.T01:CDS
ATCTCAGCAACTTCTGAAAC+TGG 0.416066 8:-89190007 None:intergenic
GCATTAGCAGTGTAAGAAAC+TGG 0.418494 8:-89188747 None:intergenic
ACCAGTTGCAAAGCCTGCTC+TGG 0.418548 8:-89189803 None:intergenic
GAGGACAGTTTCATTATGTC+AGG 0.419021 8:+89188885 MsG0880047649.01.T01:CDS
ACCAGAGCAGGCTTTGCAAC+TGG 0.419706 8:+89189802 MsG0880047649.01.T01:CDS
TTCTGATGAAACTGTGAAGC+AGG 0.425432 8:+89188983 MsG0880047649.01.T01:CDS
AAAGCCGCTAATGGAATTAG+AGG 0.426519 8:+89188866 MsG0880047649.01.T01:CDS
GCGGCTTTGGTTTGTAATGA+AGG 0.426809 8:-89188851 None:intergenic
ATTGAATTGAAAGAAAGATT+AGG 0.429553 8:-89187874 None:intergenic
CGCGGGCCAATCTACTACTT+TGG 0.432526 8:+89189775 MsG0880047649.01.T01:CDS
ATCCTACTTGAACGCCTAAC+CGG 0.435617 8:-89190641 None:intergenic
AAAATGGATGAATTAGGAAA+TGG 0.436029 8:-89187851 None:intergenic
GGCCTCTTCTGACTACTCCA+TGG 0.438649 8:+89190444 MsG0880047649.01.T01:CDS
GTTGATTTCGATGTTGCAGC+TGG 0.440851 8:-89188276 None:intergenic
AAAAGATCAGTTTATGAAAC+CGG 0.441090 8:+89188239 MsG0880047649.01.T01:CDS
TGAACATTTAGATGCAAAGT+TGG 0.442587 8:+89189694 MsG0880047649.01.T01:CDS
CTGTCCTCTAATTCCATTAG+CGG 0.445999 8:-89188870 None:intergenic
GAACAACTTCAGCATGATAT+GGG 0.446308 8:+89189569 MsG0880047649.01.T01:CDS
TCTGGCAAGAGAGTCCTAAC+AGG 0.449217 8:-89189032 None:intergenic
ATTTCAATCACAAATTCTCC+AGG 0.449988 8:+89189152 MsG0880047649.01.T01:CDS
ATGAGGGAAGGTTTAGAGAA+TGG 0.450468 8:-89188011 None:intergenic
AAAGATACCTGAAGGACTAT+TGG 0.453579 8:-89188072 None:intergenic
GAGGAATGTGCCTGTAGAAA+TGG 0.458705 8:+89190291 MsG0880047649.01.T01:CDS
TCCTCATAGATGGCTTATCT+GGG 0.459174 8:-89190273 None:intergenic
CTATACTTGCTGCTTTGTGC+AGG 0.459222 8:+89190133 MsG0880047649.01.T01:CDS
ACTCTCTCCTGTGGTAATTC+CGG 0.462561 8:-89190417 None:intergenic
ACTGGAGGAGTAGCCGCGGC+TGG 0.464928 8:-89188729 None:intergenic
CGGTGACTCAGCCATCTTGA+AGG 0.465883 8:-89188331 None:intergenic
CCGACAACAAAATTCATGTT+CGG 0.467578 8:+89188397 MsG0880047649.01.T01:CDS
TGAATTTCCGAATTTGAACT+TGG 0.469755 8:-89189884 None:intergenic
TCCAGGGTCTCATGCTGTGT+TGG 0.473321 8:+89189169 MsG0880047649.01.T01:CDS
TAATGAAGGAATTGTGGCCT+AGG 0.475030 8:-89188837 None:intergenic
CCTGAGAAACTTCTTCGCAT+GGG 0.479169 8:-89187984 None:intergenic
CACTGGATTTGAAAATGCAT+TGG 0.480475 8:+89189598 MsG0880047649.01.T01:CDS
TGAGTCCAATGTTGTTCCTA+TGG 0.481899 8:+89188539 MsG0880047649.01.T01:CDS
TGATCCTTTAGAACAGAAAA+GGG 0.482946 8:+89188434 MsG0880047649.01.T01:CDS
ACTCCCGCCAATAGTCCTTC+AGG 0.484257 8:+89188065 MsG0880047649.01.T01:CDS
GTTCTACCAAAGTAGTAGAT+TGG 0.488968 8:-89189781 None:intergenic
CCAACCACGTCCATTTCTAC+AGG 0.492594 8:-89190301 None:intergenic
CTTGCTGCTTTGTGCAGGTA+CGG 0.493645 8:+89190138 MsG0880047649.01.T01:CDS
CATGATATGGGGATGAACAC+TGG 0.495085 8:+89189581 MsG0880047649.01.T01:CDS
TCCATGGGTTCACCATCCTA+TGG 0.496368 8:+89190460 MsG0880047649.01.T01:CDS
TCCTGAGAAACTTCTTCGCA+TGG 0.501589 8:-89187985 None:intergenic
TCTGATTCTATATAAGTAGC+AGG 0.505688 8:-89189656 None:intergenic
TTGATACTGGTTCATTAGAT+GGG 0.506576 8:+89188457 MsG0880047649.01.T01:CDS
AGCATCAACAAGAGGGTCTA+CGG 0.513163 8:-89188769 None:intergenic
ATACATTGTTAGACTTCCAT+AGG 0.513338 8:-89190476 None:intergenic
CAAAATGAAGTCTGTGGTGA+AGG 0.513393 8:+89189905 MsG0880047649.01.T01:CDS
CCCATGCGAAGAAGTTTCTC+AGG 0.514117 8:+89187984 MsG0880047649.01.T01:CDS
GCTGGACTAAGCTTAAAAGT+AGG 0.515924 8:-89188711 None:intergenic
CAGCTGATATTCCCACTGCT+TGG 0.516834 8:-89190042 None:intergenic
GAATCATTGTTTCTAATCAA+AGG 0.517302 8:-89188669 None:intergenic
CAGACTCACAACTCGGAAAG+AGG 0.517493 8:-89188491 None:intergenic
TTATATAGAATCAGAAGAGC+AGG 0.518245 8:+89189664 MsG0880047649.01.T01:CDS
TCAAAGCTGCTCATTTCTGA+AGG 0.519677 8:-89190334 None:intergenic
TGAAGATGCTTTAGAGTCTG+AGG 0.522367 8:+89189745 MsG0880047649.01.T01:CDS
AGAGAAAACAGTTGAAGCAA+AGG 0.522792 8:+89189052 MsG0880047649.01.T01:CDS
TGCCACTTCTCCTGTATAAG+CGG 0.524540 8:+89190673 MsG0880047649.01.T01:exon
TGCAAAGTTATGCGCAGGTT+AGG 0.531346 8:-89190719 None:intergenic
GGAATTGTGGCCTAGGGGAT+AGG 0.532945 8:-89188830 None:intergenic
AAGATTGAGAAATGAAGAGA+AGG 0.534368 8:-89187757 None:intergenic
TCTAGGGTTAGCGGCAATGA+GGG 0.540403 8:-89188027 None:intergenic
TTGATGAATTTGAAACTGGA+GGG 0.540624 8:-89187929 None:intergenic
TGATGAATTTGAAACTGGAG+GGG 0.545019 8:-89187928 None:intergenic
GGTTTGTAATGAAGGAATTG+TGG 0.549064 8:-89188843 None:intergenic
TTCATCAGACTGAGTATCCT+CGG 0.550240 8:-89188931 None:intergenic
GATACCTGAAGGACTATTGG+CGG 0.550722 8:-89188069 None:intergenic
GATGAATTAGGAAATGGAAG+TGG 0.552353 8:-89187845 None:intergenic
AGGAGATAGTTACTCCGGTT+AGG 0.555208 8:+89190627 MsG0880047649.01.T01:CDS
ATGCGCAGGTTAGGTGATGT+AGG 0.556396 8:-89190710 None:intergenic
TGTGAGAGAAACTAGATCTA+GGG 0.557213 8:-89188043 None:intergenic
ATCTGAAATCAACTCAGAGA+TGG 0.558056 8:-89189333 None:intergenic
GGGGATTTGTCGTTGTTGAG+AGG 0.558491 8:-89187909 None:intergenic
GAAACTAGATCTAGGGTTAG+CGG 0.559957 8:-89188036 None:intergenic
TCTGTGGAGAAGCCTAAGAT+TGG 0.560840 8:+89190229 MsG0880047649.01.T01:CDS
TCCATAGGATGGTGAACCCA+TGG 0.561266 8:-89190461 None:intergenic
TTTGATGAATTTGAAACTGG+AGG 0.561812 8:-89187930 None:intergenic
CTGGACTAAGCTTAAAAGTA+GGG 0.562564 8:-89188710 None:intergenic
TACTTTGGTAGAACCAGAGC+AGG 0.564168 8:+89189790 MsG0880047649.01.T01:CDS
AATGAAGGAATTGTGGCCTA+GGG 0.570744 8:-89188836 None:intergenic
TCAGTTTATGAAACCGGCAA+AGG 0.571045 8:+89188245 MsG0880047649.01.T01:CDS
AGGTATGCAAAGTTATGCGC+AGG 0.572134 8:-89190724 None:intergenic
TGAACTTTCGGAGTTTGCAA+AGG 0.572896 8:+89189220 MsG0880047649.01.T01:CDS
TTTATAGGGACGCGGCGAAG+AGG 0.574213 8:+89190607 MsG0880047649.01.T01:intron
CAACAAAATTCATGTTCGGA+AGG 0.575732 8:+89188401 MsG0880047649.01.T01:CDS
ATCATCCATAGGAACAACAT+TGG 0.578422 8:-89188544 None:intergenic
AGGTAATGTAGATACAAAGC+TGG 0.578760 8:+89189925 MsG0880047649.01.T01:CDS
TTACCACAGGAGAGAGTCGT+TGG 0.578772 8:+89190423 MsG0880047649.01.T01:CDS
ATTGTTAGACTTCCATAGGA+TGG 0.578999 8:-89190472 None:intergenic
CTGAGAAACTTCTTCGCATG+GGG 0.580112 8:-89187983 None:intergenic
AGAGTCTGAGGAAGCACTCG+CGG 0.581478 8:+89189757 MsG0880047649.01.T01:CDS
CCTGTAGAAATGGACGTGGT+TGG 0.581689 8:+89190301 MsG0880047649.01.T01:CDS
GAAGCCTAAGATTGGATCTG+AGG 0.582716 8:+89190237 MsG0880047649.01.T01:CDS
GAGTCTGAGGAAGCACTCGC+GGG 0.584357 8:+89189758 MsG0880047649.01.T01:CDS
ATACCTGAAGGACTATTGGC+GGG 0.584843 8:-89188068 None:intergenic
TCCAACACAGCATGAGACCC+TGG 0.586313 8:-89189170 None:intergenic
ACACAGATGCTGCAATTAGA+GGG 0.588423 8:+89190065 MsG0880047649.01.T01:CDS
GGGTTAGCGGCAATGAGGGA+AGG 0.589585 8:-89188023 None:intergenic
CAGAGTCCTATCTTTGGTCG+CGG 0.593626 8:+89189431 MsG0880047649.01.T01:CDS
CAAAGCTGCTCATTTCTGAA+GGG 0.594529 8:-89190333 None:intergenic
GATCTCTGCTTCCTTCAAGA+TGG 0.595344 8:+89188320 MsG0880047649.01.T01:CDS
TAAGCTTAAAAGTAGGGTCA+AGG 0.597364 8:-89188704 None:intergenic
GTTGAATCAGTATACTCAGA+AGG 0.600194 8:+89189824 MsG0880047649.01.T01:CDS
AACCGCTTATACAGGAGAAG+TGG 0.600502 8:-89190675 None:intergenic
AAACAAATTACCTATCCCCT+AGG 0.602260 8:+89188820 MsG0880047649.01.T01:CDS
GAGGAATCAGCATCAACAAG+AGG 0.603625 8:-89188777 None:intergenic
ATCTAGGGTTAGCGGCAATG+AGG 0.603945 8:-89188028 None:intergenic
CCCCAGATAAGCCATCTATG+AGG 0.606478 8:+89190272 MsG0880047649.01.T01:CDS
ACGTGTGTTTCTTGAACAGG+AGG 0.607471 8:-89189479 None:intergenic
CAAGTTAAAGTACTGCAACT+GGG 0.609993 8:-89189378 None:intergenic
AAAAGCGCCGGAATTACCAC+AGG 0.610343 8:+89190410 MsG0880047649.01.T01:CDS
AAATCTTCAGACTCACAACT+CGG 0.613094 8:-89188498 None:intergenic
CGTTGCCTCAGAGATTTCGA+TGG 0.613875 8:+89189499 MsG0880047649.01.T01:CDS
TGAATCCCAGAAGGAATCAT+CGG 0.616386 8:+89188950 MsG0880047649.01.T01:CDS
GAAATTCAAAATGAAGTCTG+TGG 0.622812 8:+89189899 MsG0880047649.01.T01:CDS
TTTCAATCACAAATTCTCCA+GGG 0.626416 8:+89189153 MsG0880047649.01.T01:CDS
TAGGCTCGTTCCTCTCCGCA+AGG 0.628949 8:-89188365 None:intergenic
TTGTTGTCGGAAGAAGGAGT+AGG 0.632543 8:-89188384 None:intergenic
CGAAGAGGAGATAGTTACTC+CGG 0.635705 8:+89190622 MsG0880047649.01.T01:CDS
ACCCATGGAGTAGTCAGAAG+AGG 0.635753 8:-89190446 None:intergenic
AATGTATGAGAAAATTCCAA+AGG 0.637812 8:+89190492 MsG0880047649.01.T01:CDS
CTCCGGTTAGGCGTTCAAGT+AGG 0.639790 8:+89190639 MsG0880047649.01.T01:CDS
ATTGGATGCTCAAGAATCTG+AGG 0.642965 8:+89189616 MsG0880047649.01.T01:CDS
TTATACGACAAATCATCCAT+AGG 0.646153 8:-89188555 None:intergenic
TCAGTCTGATGAATCCCAGA+AGG 0.647686 8:+89188941 MsG0880047649.01.T01:CDS
AACAACTTCAGCATGATATG+GGG 0.647874 8:+89189570 MsG0880047649.01.T01:CDS
AGGAATCAGCATCAACAAGA+GGG 0.648359 8:-89188776 None:intergenic
TTCGATCTCAAAGAAAAGCG+TGG 0.648845 8:-89189086 None:intergenic
TTGAAGGAAGCAGAGATCGT+CGG 0.654068 8:-89188315 None:intergenic
TTCAGATACAGATGTTACCG+AGG 0.656226 8:+89188914 MsG0880047649.01.T01:CDS
GAAAGAAAATCCTTGCGGAG+AGG 0.661412 8:+89188355 MsG0880047649.01.T01:CDS
CTCATCCATCGAAATCTCTG+AGG 0.661658 8:-89189504 None:intergenic
CACACGGATGACCAAGCAGT+GGG 0.663869 8:+89190031 MsG0880047649.01.T01:CDS
CCTCATAGATGGCTTATCTG+GGG 0.670344 8:-89190272 None:intergenic
AGAAGGAGACCAAACACCAA+GGG 0.671884 8:+89189841 MsG0880047649.01.T01:CDS
GAATCTGAGGAAGTGCACAA+TGG 0.672121 8:+89189629 MsG0880047649.01.T01:CDS
CAGAAGGAGACCAAACACCA+AGG 0.672990 8:+89189840 MsG0880047649.01.T01:CDS
ACCGAGAAAGAAAATCCTTG+CGG 0.686892 8:+89188350 MsG0880047649.01.T01:CDS
ATCCCAGAAGGAATCATCGG+AGG 0.688240 8:+89188953 MsG0880047649.01.T01:CDS
AGAAACTGGAGGAGTAGCCG+CGG 0.691010 8:-89188733 None:intergenic
ACACACGGATGACCAAGCAG+TGG 0.696307 8:+89190030 MsG0880047649.01.T01:CDS
AGGCCAACGACTCTCTCCTG+TGG 0.696396 8:-89190426 None:intergenic
ATGAAGGAATTGTGGCCTAG+GGG 0.699302 8:-89188835 None:intergenic
AGAAGTTGCTGAGATACACA+CGG 0.700965 8:+89190015 MsG0880047649.01.T01:CDS
TGTGCCTGTAGAAATGGACG+TGG 0.719113 8:+89190297 MsG0880047649.01.T01:CDS
TTAGCAGTGTAAGAAACTGG+AGG 0.719518 8:-89188744 None:intergenic
CGTGTGTTTCTTGAACAGGA+GGG 0.721446 8:-89189478 None:intergenic
AGGGTCATAAGGTGGCACAG+AGG 0.740482 8:-89188796 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTTTTATGTATTAATTT+TGG + Chr8:89188156-89188175 MsG0880047649.01.T01:intron 10.0%
!!! TATTTTTTATTAATGAATGA+TGG + Chr8:89190837-89190856 MsG0880047649.01.T01:three_prime_UTR 10.0%
!! GAAAATGATGTTAAATTAAT+TGG + Chr8:89189953-89189972 MsG0880047649.01.T01:CDS 15.0%
!!! TCATCATATTGTTTTTTATA+GGG + Chr8:89190593-89190612 MsG0880047649.01.T01:intron 15.0%
!!! TTCATCATATTGTTTTTTAT+AGG + Chr8:89190592-89190611 MsG0880047649.01.T01:intron 15.0%
!! ATTGAATTGAAAGAAAGATT+AGG - Chr8:89187877-89187896 None:intergenic 20.0%
!! ATTTCAAATTTAATCTGTGT+TGG + Chr8:89188134-89188153 MsG0880047649.01.T01:intron 20.0%
! AAAAGATCAGTTTATGAAAC+CGG + Chr8:89188239-89188258 MsG0880047649.01.T01:CDS 25.0%
! AAAATGGATGAATTAGGAAA+TGG - Chr8:89187854-89187873 None:intergenic 25.0%
! AAATATGCCAAGTTCAAATT+CGG + Chr8:89189877-89189896 MsG0880047649.01.T01:CDS 25.0%
! AATCTCTCAATTCAATTCTT+AGG + Chr8:89187784-89187803 MsG0880047649.01.T01:five_prime_UTR 25.0%
! AATGTATGAGAAAATTCCAA+AGG + Chr8:89190492-89190511 MsG0880047649.01.T01:CDS 25.0%
! ATCTCTCAATTCAATTCTTA+GGG + Chr8:89187785-89187804 MsG0880047649.01.T01:five_prime_UTR 25.0%
! ATTAGGAAAATGGATGAATT+AGG - Chr8:89187860-89187879 None:intergenic 25.0%
! TGAAAGAAAGATTAGGAAAA+TGG - Chr8:89187870-89187889 None:intergenic 25.0%
! TTAATGGTTTCTGAATTTCT+TGG - Chr8:89187963-89187982 None:intergenic 25.0%
! TTTCTGAATTTCTTGGATTA+GGG - Chr8:89187956-89187975 None:intergenic 25.0%
!! GAATCATTGTTTAGAATCAT+AGG - Chr8:89188600-89188619 None:intergenic 25.0%
!!! AAAGGAACATTTTGAAATGA+GGG - Chr8:89188654-89188673 None:intergenic 25.0%
!!! GAATCATTGTTTCTAATCAA+AGG - Chr8:89188672-89188691 None:intergenic 25.0%
!!! TAATTTGTTTTAGGGTCATA+AGG - Chr8:89188810-89188829 None:intergenic 25.0%
AAGATTGAGAAATGAAGAGA+AGG - Chr8:89187760-89187779 None:intergenic 30.0%
ATACATTGTTAGACTTCCAT+AGG - Chr8:89190479-89190498 None:intergenic 30.0%
ATTTCAATCACAAATTCTCC+AGG + Chr8:89189152-89189171 MsG0880047649.01.T01:CDS 30.0%
GAAATTCAAAATGAAGTCTG+TGG + Chr8:89189899-89189918 MsG0880047649.01.T01:CDS 30.0%
GTTTCTGAATTTCTTGGATT+AGG - Chr8:89187957-89187976 None:intergenic 30.0%
TAGAAATACATTCACATTGC+AGG - Chr8:89190747-89190766 None:intergenic 30.0%
TCTGATTCTATATAAGTAGC+AGG - Chr8:89189659-89189678 None:intergenic 30.0%
TGAAAGAAAAAGATACCTGA+AGG - Chr8:89188083-89188102 None:intergenic 30.0%
TGAACATTTAGATGCAAAGT+TGG + Chr8:89189694-89189713 MsG0880047649.01.T01:CDS 30.0%
TGAATTTCCGAATTTGAACT+TGG - Chr8:89189887-89189906 None:intergenic 30.0%
TTATACGACAAATCATCCAT+AGG - Chr8:89188558-89188577 None:intergenic 30.0%
TTATATAGAATCAGAAGAGC+AGG + Chr8:89189664-89189683 MsG0880047649.01.T01:CDS 30.0%
TTATGAGTCTTCTGAACTTT+CGG + Chr8:89189208-89189227 MsG0880047649.01.T01:CDS 30.0%
TTTCAATCACAAATTCTCCA+GGG + Chr8:89189153-89189172 MsG0880047649.01.T01:CDS 30.0%
! AAGTATAGCACAATGTTTTG+AGG - Chr8:89190121-89190140 None:intergenic 30.0%
! ATTTCGATGGATGAGTATTT+TGG + Chr8:89189512-89189531 MsG0880047649.01.T01:CDS 30.0%
! TTGATGAATTTGAAACTGGA+GGG - Chr8:89187932-89187951 None:intergenic 30.0%
! TTTGATGAATTTGAAACTGG+AGG - Chr8:89187933-89187952 None:intergenic 30.0%
!! AAAATTCGCTTTTGCAAACT+GGG - Chr8:89189264-89189283 None:intergenic 30.0%
!! TGATCCTTTAGAACAGAAAA+GGG + Chr8:89188434-89188453 MsG0880047649.01.T01:CDS 30.0%
!! TTGATACTGGTTCATTAGAT+GGG + Chr8:89188457-89188476 MsG0880047649.01.T01:CDS 30.0%
!!! CAAAGGAACATTTTGAAATG+AGG - Chr8:89188655-89188674 None:intergenic 30.0%
!!! GGGATAGGTAATTTGTTTTA+GGG - Chr8:89188818-89188837 None:intergenic 30.0%
!!! TATTGTTTTTTATAGGGACG+CGG + Chr8:89190599-89190618 MsG0880047649.01.T01:intron 30.0%
AAACAAATTACCTATCCCCT+AGG + Chr8:89188820-89188839 MsG0880047649.01.T01:CDS 35.0%
AAAGATACCTGAAGGACTAT+TGG - Chr8:89188075-89188094 None:intergenic 35.0%
AAATCTTCAGACTCACAACT+CGG - Chr8:89188501-89188520 None:intergenic 35.0%
AACAACTTCAGCATGATATG+GGG + Chr8:89189570-89189589 MsG0880047649.01.T01:CDS 35.0%
AGAACAACTTCAGCATGATA+TGG + Chr8:89189568-89189587 MsG0880047649.01.T01:CDS 35.0%
AGAGAAAACAGTTGAAGCAA+AGG + Chr8:89189052-89189071 MsG0880047649.01.T01:CDS 35.0%
AGGTAATGTAGATACAAAGC+TGG + Chr8:89189925-89189944 MsG0880047649.01.T01:CDS 35.0%
ATCATCCATAGGAACAACAT+TGG - Chr8:89188547-89188566 None:intergenic 35.0%
ATTGTTAGACTTCCATAGGA+TGG - Chr8:89190475-89190494 None:intergenic 35.0%
CAACAAAATTCATGTTCGGA+AGG + Chr8:89188401-89188420 MsG0880047649.01.T01:CDS 35.0%
CAATCAACAATACTCACCTT+TGG - Chr8:89190511-89190530 None:intergenic 35.0%
CACTGGATTTGAAAATGCAT+TGG + Chr8:89189598-89189617 MsG0880047649.01.T01:CDS 35.0%
CCGACAACAAAATTCATGTT+CGG + Chr8:89188397-89188416 MsG0880047649.01.T01:CDS 35.0%
CTGGACTAAGCTTAAAAGTA+GGG - Chr8:89188713-89188732 None:intergenic 35.0%
GAACAACTTCAGCATGATAT+GGG + Chr8:89189569-89189588 MsG0880047649.01.T01:CDS 35.0%
GATGAATTAGGAAATGGAAG+TGG - Chr8:89187848-89187867 None:intergenic 35.0%
GGTTTGTAATGAAGGAATTG+TGG - Chr8:89188846-89188865 None:intergenic 35.0%
GTTAATCAGAGTCCTATCTT+TGG + Chr8:89189425-89189444 MsG0880047649.01.T01:CDS 35.0%
GTTCTACCAAAGTAGTAGAT+TGG - Chr8:89189784-89189803 None:intergenic 35.0%
GTTGAATCAGTATACTCAGA+AGG + Chr8:89189824-89189843 MsG0880047649.01.T01:CDS 35.0%
TAAGCTTAAAAGTAGGGTCA+AGG - Chr8:89188707-89188726 None:intergenic 35.0%
TGTGAGAGAAACTAGATCTA+GGG - Chr8:89188046-89188065 None:intergenic 35.0%
TTTCTGAACAAAGTCCTGTT+AGG + Chr8:89189018-89189037 MsG0880047649.01.T01:CDS 35.0%
! ATCTGAAATCAACTCAGAGA+TGG - Chr8:89189336-89189355 None:intergenic 35.0%
! GAGTTGATTTCAGATGTTAG+AGG + Chr8:89189341-89189360 MsG0880047649.01.T01:CDS 35.0%
! GGGTTTGATGAATTTGAAAC+TGG - Chr8:89187936-89187955 None:intergenic 35.0%
! TCAACCCTTTTCTGTTCTAA+AGG - Chr8:89188441-89188460 None:intergenic 35.0%
! TGATGAATTTGAAACTGGAG+GGG - Chr8:89187931-89187950 None:intergenic 35.0%
! TGTGTTGGAAGACTTTTATG+AGG + Chr8:89189184-89189203 MsG0880047649.01.T01:CDS 35.0%
! TTTGCAAAAGCGAATTTTGC+AGG + Chr8:89189266-89189285 MsG0880047649.01.T01:CDS 35.0%
! TTTGCTTCAACTGTTTTCTC+TGG - Chr8:89189053-89189072 None:intergenic 35.0%
!! CAAAAAGTTTACTAGCTCTG+TGG + Chr8:89190213-89190232 MsG0880047649.01.T01:CDS 35.0%
!! CAAAATTCGCTTTTGCAAAC+TGG - Chr8:89189265-89189284 None:intergenic 35.0%
!! CAAGTTAAAGTACTGCAACT+GGG - Chr8:89189381-89189400 None:intergenic 35.0%
!! CCGAACATGAATTTTGTTGT+CGG - Chr8:89188400-89188419 None:intergenic 35.0%
!! CTGATCCTTTAGAACAGAAA+AGG + Chr8:89188433-89188452 MsG0880047649.01.T01:CDS 35.0%
!! GTTGATACTGGTTCATTAGA+TGG + Chr8:89188456-89188475 MsG0880047649.01.T01:CDS 35.0%
!! TCAAGTTAAAGTACTGCAAC+TGG - Chr8:89189382-89189401 None:intergenic 35.0%
!! TGAATTTTGTTGTCGGAAGA+AGG - Chr8:89188393-89188412 None:intergenic 35.0%
!!! GGGGATAGGTAATTTGTTTT+AGG - Chr8:89188819-89188838 None:intergenic 35.0%
!!! TTTGTTTTAGGGTCATAAGG+TGG - Chr8:89188807-89188826 None:intergenic 35.0%
AAAGCCGCTAATGGAATTAG+AGG + Chr8:89188866-89188885 MsG0880047649.01.T01:CDS 40.0%
AATGAAGGAATTGTGGCCTA+GGG - Chr8:89188839-89188858 None:intergenic 40.0%
ACACAGATGCTGCAATTAGA+GGG + Chr8:89190065-89190084 MsG0880047649.01.T01:CDS 40.0%
ACCGAGAAAGAAAATCCTTG+CGG + Chr8:89188350-89188369 MsG0880047649.01.T01:CDS 40.0%
AGAAGTTGCTGAGATACACA+CGG + Chr8:89190015-89190034 MsG0880047649.01.T01:CDS 40.0%
AGGAATCAGCATCAACAAGA+GGG - Chr8:89188779-89188798 None:intergenic 40.0%
ATGAGGGAAGGTTTAGAGAA+TGG - Chr8:89188014-89188033 None:intergenic 40.0%
ATTGGATGCTCAAGAATCTG+AGG + Chr8:89189616-89189635 MsG0880047649.01.T01:CDS 40.0%
CAAAATGAAGTCTGTGGTGA+AGG + Chr8:89189905-89189924 MsG0880047649.01.T01:CDS 40.0%
CAAAGCTGCTCATTTCTGAA+GGG - Chr8:89190336-89190355 None:intergenic 40.0%
CTGTCCTCTAATTCCATTAG+CGG - Chr8:89188873-89188892 None:intergenic 40.0%
GAGGACAGTTTCATTATGTC+AGG + Chr8:89188885-89188904 MsG0880047649.01.T01:CDS 40.0%
GCATTAGCAGTGTAAGAAAC+TGG - Chr8:89188750-89188769 None:intergenic 40.0%
GCTGGACTAAGCTTAAAAGT+AGG - Chr8:89188714-89188733 None:intergenic 40.0%
GGTCGCGGTGAAAATAAAAT+AGG + Chr8:89189446-89189465 MsG0880047649.01.T01:CDS 40.0%
GTGTGAGAGAAACTAGATCT+AGG - Chr8:89188047-89188066 None:intergenic 40.0%
TAATGAAGGAATTGTGGCCT+AGG - Chr8:89188840-89188859 None:intergenic 40.0%
TCAAAGCTGCTCATTTCTGA+AGG - Chr8:89190337-89190356 None:intergenic 40.0%
TCAGTTTATGAAACCGGCAA+AGG + Chr8:89188245-89188264 MsG0880047649.01.T01:CDS 40.0%
TCCTCATAGATGGCTTATCT+GGG - Chr8:89190276-89190295 None:intergenic 40.0%
TCGTTCGGAATTCGCATATT+TGG + Chr8:89189291-89189310 MsG0880047649.01.T01:CDS 40.0%
TCTAATTCCATTAGCGGCTT+TGG - Chr8:89188867-89188886 None:intergenic 40.0%
TGAACTTTCGGAGTTTGCAA+AGG + Chr8:89189220-89189239 MsG0880047649.01.T01:CDS 40.0%
TGAATCCCAGAAGGAATCAT+CGG + Chr8:89188950-89188969 MsG0880047649.01.T01:CDS 40.0%
TGAGTCCAATGTTGTTCCTA+TGG + Chr8:89188539-89188558 MsG0880047649.01.T01:CDS 40.0%
TTACAAACCAAAGCCGCTAA+TGG + Chr8:89188857-89188876 MsG0880047649.01.T01:CDS 40.0%
TTAGCAGTGTAAGAAACTGG+AGG - Chr8:89188747-89188766 None:intergenic 40.0%
TTAGGCGTTCAAGTAGGATT+AGG + Chr8:89190645-89190664 MsG0880047649.01.T01:CDS 40.0%
TTCAGATACAGATGTTACCG+AGG + Chr8:89188914-89188933 MsG0880047649.01.T01:CDS 40.0%
TTCATCAGACTGAGTATCCT+CGG - Chr8:89188934-89188953 None:intergenic 40.0%
TTCCTCATAGATGGCTTATC+TGG - Chr8:89190277-89190296 None:intergenic 40.0%
TTCGATCTCAAAGAAAAGCG+TGG - Chr8:89189089-89189108 None:intergenic 40.0%
TTCTGATGAAACTGTGAAGC+AGG + Chr8:89188983-89189002 MsG0880047649.01.T01:CDS 40.0%
TTGTCCTCAGATCCAATCTT+AGG - Chr8:89190244-89190263 None:intergenic 40.0%
! CGAATTTTGCAGGTTTCGTT+CGG + Chr8:89189276-89189295 MsG0880047649.01.T01:CDS 40.0%
! GAAACTAGATCTAGGGTTAG+CGG - Chr8:89188039-89188058 None:intergenic 40.0%
! TCCGCAAGGATTTTCTTTCT+CGG - Chr8:89188354-89188373 None:intergenic 40.0%
! TTGCAGGTGCAACTTTTAAC+TGG + Chr8:89190167-89190186 MsG0880047649.01.T01:CDS 40.0%
! TTTTCATGATCATCAGCCCT+TGG - Chr8:89189860-89189879 None:intergenic 40.0%
!! ATCTCAGCAACTTCTGAAAC+TGG - Chr8:89190010-89190029 None:intergenic 40.0%
!! GAACAGAAAAGGGTTGATAC+TGG + Chr8:89188444-89188463 MsG0880047649.01.T01:CDS 40.0%
!! GTGCAACTTTTAACTGGTCA+AGG + Chr8:89190173-89190192 MsG0880047649.01.T01:CDS 40.0%
!! TGAAGATGCTTTAGAGTCTG+AGG + Chr8:89189745-89189764 MsG0880047649.01.T01:CDS 40.0%
!!! ACGCTTTTCTTTGAGATCGA+AGG + Chr8:89189088-89189107 MsG0880047649.01.T01:CDS 40.0%
AACCGCTTATACAGGAGAAG+TGG - Chr8:89190678-89190697 None:intergenic 45.0%
ACAGGCACATTCCTCATAGA+TGG - Chr8:89190286-89190305 None:intergenic 45.0%
ACGTGTGTTTCTTGAACAGG+AGG - Chr8:89189482-89189501 None:intergenic 45.0%
ACTCTCTCCTGTGGTAATTC+CGG - Chr8:89190420-89190439 None:intergenic 45.0%
ACTTCTTCGCATGGGGTTAA+TGG - Chr8:89187979-89187998 None:intergenic 45.0%
AGAAGGAGACCAAACACCAA+GGG + Chr8:89189841-89189860 MsG0880047649.01.T01:CDS 45.0%
AGCATCAACAAGAGGGTCTA+CGG - Chr8:89188772-89188791 None:intergenic 45.0%
AGGAGATAGTTACTCCGGTT+AGG + Chr8:89190627-89190646 MsG0880047649.01.T01:CDS 45.0%
AGGTATGCAAAGTTATGCGC+AGG - Chr8:89190727-89190746 None:intergenic 45.0%
ATACCTGAAGGACTATTGGC+GGG - Chr8:89188071-89188090 None:intergenic 45.0%
ATCCTACTTGAACGCCTAAC+CGG - Chr8:89190644-89190663 None:intergenic 45.0%
ATCCTCCGATGATTCCTTCT+GGG - Chr8:89188958-89188977 None:intergenic 45.0%
ATGAAGGAATTGTGGCCTAG+GGG - Chr8:89188838-89188857 None:intergenic 45.0%
CATGATATGGGGATGAACAC+TGG + Chr8:89189581-89189600 MsG0880047649.01.T01:CDS 45.0%
CCAGCAAAAACCGCTTATAC+AGG - Chr8:89190686-89190705 None:intergenic 45.0%
CCTCATAGATGGCTTATCTG+GGG - Chr8:89190275-89190294 None:intergenic 45.0%
CCTGAGAAACTTCTTCGCAT+GGG - Chr8:89187987-89188006 None:intergenic 45.0%
CGAAGAGGAGATAGTTACTC+CGG + Chr8:89190622-89190641 MsG0880047649.01.T01:CDS 45.0%
CGTGTGTTTCTTGAACAGGA+GGG - Chr8:89189481-89189500 None:intergenic 45.0%
CTCATCCATCGAAATCTCTG+AGG - Chr8:89189507-89189526 None:intergenic 45.0%
CTGAGAAACTTCTTCGCATG+GGG - Chr8:89187986-89188005 None:intergenic 45.0%
GAAAGAAAATCCTTGCGGAG+AGG + Chr8:89188355-89188374 MsG0880047649.01.T01:CDS 45.0%
GAAGCCTAAGATTGGATCTG+AGG + Chr8:89190237-89190256 MsG0880047649.01.T01:CDS 45.0%
GACACAGATGCTGCAATTAG+AGG + Chr8:89190064-89190083 MsG0880047649.01.T01:CDS 45.0%
GAGGAATCAGCATCAACAAG+AGG - Chr8:89188780-89188799 None:intergenic 45.0%
GAGGAATGTGCCTGTAGAAA+TGG + Chr8:89190291-89190310 MsG0880047649.01.T01:CDS 45.0%
GATACCTGAAGGACTATTGG+CGG - Chr8:89188072-89188091 None:intergenic 45.0%
GATCTCTGCTTCCTTCAAGA+TGG + Chr8:89188320-89188339 MsG0880047649.01.T01:CDS 45.0%
GCAACGTGTGTTTCTTGAAC+AGG - Chr8:89189485-89189504 None:intergenic 45.0%
TACTTTGGTAGAACCAGAGC+AGG + Chr8:89189790-89189809 MsG0880047649.01.T01:CDS 45.0%
TCAGTCTGATGAATCCCAGA+AGG + Chr8:89188941-89188960 MsG0880047649.01.T01:CDS 45.0%
TCCTGAGAAACTTCTTCGCA+TGG - Chr8:89187988-89188007 None:intergenic 45.0%
TCTGTGGAGAAGCCTAAGAT+TGG + Chr8:89190229-89190248 MsG0880047649.01.T01:CDS 45.0%
TGCAAAGTTATGCGCAGGTT+AGG - Chr8:89190722-89190741 None:intergenic 45.0%
TTGAAGGAAGCAGAGATCGT+CGG - Chr8:89188318-89188337 None:intergenic 45.0%
TTGTTGTCGGAAGAAGGAGT+AGG - Chr8:89188387-89188406 None:intergenic 45.0%
! CCTGTATAAGCGGTTTTTGC+TGG + Chr8:89190683-89190702 MsG0880047649.01.T01:exon 45.0%
! GAATCTGAGGAAGTGCACAA+TGG + Chr8:89189629-89189648 MsG0880047649.01.T01:CDS 45.0%
! GCAGGTACGGTTTTTATTGC+AGG + Chr8:89190151-89190170 MsG0880047649.01.T01:CDS 45.0%
! GTTGATTTCGATGTTGCAGC+TGG - Chr8:89188279-89188298 None:intergenic 45.0%
! TGCCACTTCTCCTGTATAAG+CGG + Chr8:89190673-89190692 MsG0880047649.01.T01:exon 45.0%
! TTTTAAGCTTAGTCCAGCCG+CGG + Chr8:89188716-89188735 MsG0880047649.01.T01:CDS 45.0%
! TTTTCACCGCGACCAAAGAT+AGG - Chr8:89189440-89189459 None:intergenic 45.0%
!! CTATACTTGCTGCTTTGTGC+AGG + Chr8:89190133-89190152 MsG0880047649.01.T01:CDS 45.0%
!! GCGGCTTTGGTTTGTAATGA+AGG - Chr8:89188854-89188873 None:intergenic 45.0%
ACCCATGGAGTAGTCAGAAG+AGG - Chr8:89190449-89190468 None:intergenic 50.0%
ATCCCAGAAGGAATCATCGG+AGG + Chr8:89188953-89188972 MsG0880047649.01.T01:CDS 50.0%
ATGCGCAGGTTAGGTGATGT+AGG - Chr8:89190713-89190732 None:intergenic 50.0%
CAGAAGGAGACCAAACACCA+AGG + Chr8:89189840-89189859 MsG0880047649.01.T01:CDS 50.0%
CAGACTCACAACTCGGAAAG+AGG - Chr8:89188494-89188513 None:intergenic 50.0%
CAGAGTCCTATCTTTGGTCG+CGG + Chr8:89189431-89189450 MsG0880047649.01.T01:CDS 50.0%
CAGCTGATATTCCCACTGCT+TGG - Chr8:89190045-89190064 None:intergenic 50.0%
CATCCTCCGATGATTCCTTC+TGG - Chr8:89188959-89188978 None:intergenic 50.0%
CCAACCACGTCCATTTCTAC+AGG - Chr8:89190304-89190323 None:intergenic 50.0%
CCCATGCGAAGAAGTTTCTC+AGG + Chr8:89187984-89188003 MsG0880047649.01.T01:CDS 50.0%
CCCCAGATAAGCCATCTATG+AGG + Chr8:89190272-89190291 MsG0880047649.01.T01:CDS 50.0%
CCTGTAGAAATGGACGTGGT+TGG + Chr8:89190301-89190320 MsG0880047649.01.T01:CDS 50.0%
CGTTGCCTCAGAGATTTCGA+TGG + Chr8:89189499-89189518 MsG0880047649.01.T01:CDS 50.0%
GCCTCTTCTGACTACTCCAT+GGG + Chr8:89190445-89190464 MsG0880047649.01.T01:CDS 50.0%
GGGGATTTGTCGTTGTTGAG+AGG - Chr8:89187912-89187931 None:intergenic 50.0%
TCCATAGGATGGTGAACCCA+TGG - Chr8:89190464-89190483 None:intergenic 50.0%
TCCATGGGTTCACCATCCTA+TGG + Chr8:89190460-89190479 MsG0880047649.01.T01:CDS 50.0%
TCTGGCAAGAGAGTCCTAAC+AGG - Chr8:89189035-89189054 None:intergenic 50.0%
TGTGCCTGTAGAAATGGACG+TGG + Chr8:89190297-89190316 MsG0880047649.01.T01:CDS 50.0%
TTACCACAGGAGAGAGTCGT+TGG + Chr8:89190423-89190442 MsG0880047649.01.T01:CDS 50.0%
! ATCTAGGGTTAGCGGCAATG+AGG - Chr8:89188031-89188050 None:intergenic 50.0%
! TCTAGGGTTAGCGGCAATGA+GGG - Chr8:89188030-89188049 None:intergenic 50.0%
!! AAAAGCGCCGGAATTACCAC+AGG + Chr8:89190410-89190429 MsG0880047649.01.T01:CDS 50.0%
!! CTTGCTGCTTTGTGCAGGTA+CGG + Chr8:89190138-89190157 MsG0880047649.01.T01:CDS 50.0%
!! GATCATCAGCCCTTGGTGTT+TGG - Chr8:89189853-89189872 None:intergenic 50.0%
ACACACGGATGACCAAGCAG+TGG + Chr8:89190030-89190049 MsG0880047649.01.T01:CDS 55.0%
ACCAGAGCAGGCTTTGCAAC+TGG + Chr8:89189802-89189821 MsG0880047649.01.T01:CDS 55.0%
ACCAGTTGCAAAGCCTGCTC+TGG - Chr8:89189806-89189825 None:intergenic 55.0%
ACTCCCGCCAATAGTCCTTC+AGG + Chr8:89188065-89188084 MsG0880047649.01.T01:CDS 55.0%
AGAAACTGGAGGAGTAGCCG+CGG - Chr8:89188736-89188755 None:intergenic 55.0%
AGGGTCATAAGGTGGCACAG+AGG - Chr8:89188799-89188818 None:intergenic 55.0%
CACACGGATGACCAAGCAGT+GGG + Chr8:89190031-89190050 MsG0880047649.01.T01:CDS 55.0%
CGCGGGCCAATCTACTACTT+TGG + Chr8:89189775-89189794 MsG0880047649.01.T01:CDS 55.0%
CGGTGACTCAGCCATCTTGA+AGG - Chr8:89188334-89188353 None:intergenic 55.0%
CTCCGGTTAGGCGTTCAAGT+AGG + Chr8:89190639-89190658 MsG0880047649.01.T01:CDS 55.0%
GCTGGCGATCTAACCTTTGC+CGG - Chr8:89188261-89188280 None:intergenic 55.0%
GGAATTGTGGCCTAGGGGAT+AGG - Chr8:89188833-89188852 None:intergenic 55.0%
GGCCTCTTCTGACTACTCCA+TGG + Chr8:89190444-89190463 MsG0880047649.01.T01:CDS 55.0%
TCCAACACAGCATGAGACCC+TGG - Chr8:89189173-89189192 None:intergenic 55.0%
TCCAGGGTCTCATGCTGTGT+TGG + Chr8:89189169-89189188 MsG0880047649.01.T01:CDS 55.0%
TTTATAGGGACGCGGCGAAG+AGG + Chr8:89190607-89190626 MsG0880047649.01.T01:intron 55.0%
! CCAGCGTAGAGAAAAAGCGC+CGG + Chr8:89190398-89190417 MsG0880047649.01.T01:CDS 55.0%
!! AGAGTCTGAGGAAGCACTCG+CGG + Chr8:89189757-89189776 MsG0880047649.01.T01:CDS 55.0%
AGGCCAACGACTCTCTCCTG+TGG - Chr8:89190429-89190448 None:intergenic 60.0%
TAGGCTCGTTCCTCTCCGCA+AGG - Chr8:89188368-89188387 None:intergenic 60.0%
! GGGTTAGCGGCAATGAGGGA+AGG - Chr8:89188026-89188045 None:intergenic 60.0%
!! GAGTCTGAGGAAGCACTCGC+GGG + Chr8:89189758-89189777 MsG0880047649.01.T01:CDS 60.0%
!!! CCGGCGCTTTTTCTCTACGC+TGG - Chr8:89190401-89190420 None:intergenic 60.0%
ACTGGAGGAGTAGCCGCGGC+TGG - Chr8:89188732-89188751 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 89187756 89190865 89187756 ID=MsG0880047649.01;Name=MsG0880047649.01
Chr8 mRNA 89187756 89190865 89187756 ID=MsG0880047649.01.T01;Parent=MsG0880047649.01;Name=MsG0880047649.01.T01;_AED=0.19;_eAED=0.19;_QI=150|1|1|1|1|1|3|174|857
Chr8 exon 89187756 89188086 89187756 ID=MsG0880047649.01.T01:exon:18733;Parent=MsG0880047649.01.T01
Chr8 exon 89188199 89190513 89188199 ID=MsG0880047649.01.T01:exon:18734;Parent=MsG0880047649.01.T01
Chr8 exon 89190614 89190865 89190614 ID=MsG0880047649.01.T01:exon:18735;Parent=MsG0880047649.01.T01
Chr8 five_prime_UTR 89187756 89187905 89187756 ID=MsG0880047649.01.T01:five_prime_utr;Parent=MsG0880047649.01.T01
Chr8 CDS 89187906 89188086 89187906 ID=MsG0880047649.01.T01:cds;Parent=MsG0880047649.01.T01
Chr8 CDS 89188199 89190513 89188199 ID=MsG0880047649.01.T01:cds;Parent=MsG0880047649.01.T01
Chr8 CDS 89190614 89190691 89190614 ID=MsG0880047649.01.T01:cds;Parent=MsG0880047649.01.T01
Chr8 three_prime_UTR 89190692 89190865 89190692 ID=MsG0880047649.01.T01:three_prime_utr;Parent=MsG0880047649.01.T01
Gene Sequence

>MsG0880047649.01.T01

ATGCCTCTCAACAACGACAAATCCCCTCCAGTTTCAAATTCATCAAACCCTAATCCAAGAAATTCAGAAACCATTAACCCCATGCGAAGAAGTTTCTCAGGAAATCCATTCTCTAAACCTTCCCTCATTGCCGCTAACCCTAGATCTAGTTTCTCTCACACTCCCGCCAATAGTCCTTCAGATTTTTCAAGAAAAAGCTTTGCTGATGACAAAGAAAACACAAAAGATCAGTTTATGAAACCGGCAAAGGTTAGATCGCCAGCTGCAACATCGAAATCAACGAAGAATTTCATGTCACCGACGATCTCTGCTTCCTTCAAGATGGCTGAGTCACCGAGAAAGAAAATCCTTGCGGAGAGGAACGAGCCTACTCCTTCTTCCGACAACAAAATTCATGTTCGGAAGGTAACTTTTTCTGATCCTTTAGAACAGAAAAGGGTTGATACTGGTTCATTAGATGGGAATAGTAGAGTCCTCTTTCCGAGTTGTGAGTCTGAAGATTTGAGTGATGAAAATTTGTCTGAGTCCAATGTTGTTCCTATGGATGATTTGTCGTATAATGCTATGCGTATGAATGTTCCTATGATTCTAAACAATGATTCAGATTTTTCATTTGAAACTGTGCACACTGAACCCTCATTTCAAAATGTTCCTTTGATTAGAAACAATGATTCAGATTTTGTTAACCTTGACCCTACTTTTAAGCTTAGTCCAGCCGCGGCTACTCCTCCAGTTTCTTACACTGCTAATGCCGTAGACCCTCTTGTTGATGCTGATTCCTCTGTGCCACCTTATGACCCTAAAACAAATTACCTATCCCCTAGGCCACAATTCCTTCATTACAAACCAAAGCCGCTAATGGAATTAGAGGACAGTTTCATTATGTCAGGAAACTTTTCAGATACAGATGTTACCGAGGATACTCAGTCTGATGAATCCCAGAAGGAATCATCGGAGGATGTTTCTTCTGATGAAACTGTGAAGCAGGAAGATGATCAAATTTCTGAACAAAGTCCTGTTAGGACTCTCTTGCCAGAGAAAACAGTTGAAGCAAAGGAGCTGCAAAAACCACGCTTTTCTTTGAGATCGAAGGCTGCTGTTCTAATTTTGCTTCTTTCAATTGCTTTTGTATCAATTTCAATCACAAATTCTCCAGGGTCTCATGCTGTGTTGGAAGACTTTTATGAGGCTTATGAGTCTTCTGAACTTTCGGAGTTTGCAAAGGCTAACTTTGATCAATTCTCCCAGTTTGCAAAAGCGAATTTTGCAGGTTTCGTTCGGAATTCGCATATTTGGTATACTAAGTCGCTGTCTTCCATCTCTGAGTTGATTTCAGATGTTAGAGGAGTGCGTAATTTGTCCCAGTTGCAGTACTTTAACTTGACTGTGCTGCACGACTATAGTGCAGTTAATCAGAGTCCTATCTTTGGTCGCGGTGAAAATAAAATAGGCGACACTCGCCCTCCTGTTCAAGAAACACACGTTGCCTCAGAGATTTCGATGGATGAGTATTTTGGTGATATTTTAGCAGAGCATTATGAAGTATATGAAGAACAACTTCAGCATGATATGGGGATGAACACTGGATTTGAAAATGCATTGGATGCTCAAGAATCTGAGGAAGTGCACAATGGACAACCTGCTACTTATATAGAATCAGAAGAGCAGGCTGAACATGAACATTTAGATGCAAAGTTGGAAGAAGAAATTGATGCTAGCTTTGAAGTTGAAGATGCTTTAGAGTCTGAGGAAGCACTCGCGGGCCAATCTACTACTTTGGTAGAACCAGAGCAGGCTTTGCAACTGGTTGAATCAGTATACTCAGAAGGAGACCAAACACCAAGGGCTGATGATCATGAAAATATGCCAAGTTCAAATTCGGAAATTCAAAATGAAGTCTGTGGTGAAGGTAATGTAGATACAAAGCTGGAACAAGAAAATGATGTTAAATTAATTGGCAAAGAAAGTGATGCTGATCTCAAGCATTCACCAGTTTCAGAAGTTGCTGAGATACACACGGATGACCAAGCAGTGGGAATATCAGCTGACACAGATGCTGCAATTAGAGGGAATGAGCAGCTATTAGAAGCAACTCACATTCCTCAAAACATTGTGCTATACTTGCTGCTTTGTGCAGGTACGGTTTTTATTGCAGGTGCAACTTTTAACTGGTCAAGGAAAGTTAAAAGCAGAAGCAAAAAGTTTACTAGCTCTGTGGAGAAGCCTAAGATTGGATCTGAGGACAAGAAGATTTCCCCAGATAAGCCATCTATGAGGAATGTGCCTGTAGAAATGGACGTGGTTGGAGAATCGTGCCCTTCAGAAATGAGCAGCTTTGAGAAGAGCTCATCTAACAGAGTGAATCATTTGAGTGAAGCTACCAGCGTAGAGAAAAAGCGCCGGAATTACCACAGGAGAGAGTCGTTGGCCTCTTCTGACTACTCCATGGGTTCACCATCCTATGGAAGTCTAACAATGTATGAGAAAATTCCAAAGGGACGCGGCGAAGAGGAGATAGTTACTCCGGTTAGGCGTTCAAGTAGGATTAGGAGCATTGCCACTTCTCCTGTATAA

Protein sequence

>MsG0880047649.01.T01

MPLNNDKSPPVSNSSNPNPRNSETINPMRRSFSGNPFSKPSLIAANPRSSFSHTPANSPSDFSRKSFADDKENTKDQFMKPAKVRSPAATSKSTKNFMSPTISASFKMAESPRKKILAERNEPTPSSDNKIHVRKVTFSDPLEQKRVDTGSLDGNSRVLFPSCESEDLSDENLSESNVVPMDDLSYNAMRMNVPMILNNDSDFSFETVHTEPSFQNVPLIRNNDSDFVNLDPTFKLSPAAATPPVSYTANAVDPLVDADSSVPPYDPKTNYLSPRPQFLHYKPKPLMELEDSFIMSGNFSDTDVTEDTQSDESQKESSEDVSSDETVKQEDDQISEQSPVRTLLPEKTVEAKELQKPRFSLRSKAAVLILLLSIAFVSISITNSPGSHAVLEDFYEAYESSELSEFAKANFDQFSQFAKANFAGFVRNSHIWYTKSLSSISELISDVRGVRNLSQLQYFNLTVLHDYSAVNQSPIFGRGENKIGDTRPPVQETHVASEISMDEYFGDILAEHYEVYEEQLQHDMGMNTGFENALDAQESEEVHNGQPATYIESEEQAEHEHLDAKLEEEIDASFEVEDALESEEALAGQSTTLVEPEQALQLVESVYSEGDQTPRADDHENMPSSNSEIQNEVCGEGNVDTKLEQENDVKLIGKESDADLKHSPVSEVAEIHTDDQAVGISADTDAAIRGNEQLLEATHIPQNIVLYLLLCAGTVFIAGATFNWSRKVKSRSKKFTSSVEKPKIGSEDKKISPDKPSMRNVPVEMDVVGESCPSEMSSFEKSSSNRVNHLSEATSVEKKRRNYHRRESLASSDYSMGSPSYGSLTMYEKIPKGRGEEEIVTPVRRSSRIRSIATSPV*