Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037741.01.T01 | XP_013448244.1 | 75.556 | 315 | 44 | 6 | 1 | 284 | 24 | 336 | 6.26E-154 | 445 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037741.01.T01 | A0A072TYL1 | 75.556 | 315 | 44 | 6 | 1 | 284 | 24 | 336 | 2.99e-154 | 445 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0780037741.01 | 0.851675 | 7.606275e-61 | 1.551265e-57 |
| MsG0080048258.01 | MsG0780037741.01 | 0.834423 | 3.022910e-56 | 3.585973e-53 |
| MsG0080048311.01 | MsG0780037741.01 | 0.804046 | 2.606465e-49 | 1.330475e-46 |
| MsG0080048775.01 | MsG0780037741.01 | 0.872229 | 3.734472e-67 | 1.550609e-63 |
| MsG0080048781.01 | MsG0780037741.01 | 0.855235 | 7.228415e-62 | 1.657389e-58 |
| MsG0180001293.01 | MsG0780037741.01 | 0.882118 | 1.362247e-70 | 8.194785e-67 |
| MsG0180002218.01 | MsG0780037741.01 | 0.836253 | 1.043133e-56 | 1.307493e-53 |
| MsG0180002397.01 | MsG0780037741.01 | 0.858268 | 9.255013e-63 | 2.348497e-59 |
| MsG0180002583.01 | MsG0780037741.01 | 0.804367 | 2.234520e-49 | 1.150060e-46 |
| MsG0180003485.01 | MsG0780037741.01 | 0.848076 | 7.716530e-60 | 1.399374e-56 |
| MsG0180003658.01 | MsG0780037741.01 | 0.867661 | 1.160597e-65 | 4.084114e-62 |
| MsG0180003698.01 | MsG0780037741.01 | 0.836318 | 1.004177e-56 | 1.261118e-53 |
| MsG0180003796.01 | MsG0780037741.01 | 0.844358 | 7.943812e-59 | 1.279184e-55 |
| MsG0180003857.01 | MsG0780037741.01 | 0.853841 | 1.829609e-61 | 4.006915e-58 |
| MsG0180004120.01 | MsG0780037741.01 | 0.827222 | 1.762704e-54 | 1.691040e-51 |
| MsG0180004126.01 | MsG0780037741.01 | 0.826283 | 2.952743e-54 | 2.756997e-51 |
| MsG0180004185.01 | MsG0780037741.01 | 0.854932 | 8.850147e-62 | 2.009054e-58 |
| MsG0180004299.01 | MsG0780037741.01 | 0.874039 | 9.220050e-68 | 4.089170e-64 |
| MsG0180004538.01 | MsG0780037741.01 | 0.880080 | 7.367237e-70 | 4.095083e-66 |
| MsG0180004583.01 | MsG0780037741.01 | 0.882200 | 1.271002e-70 | 7.671690e-67 |
| MsG0180004661.01 | MsG0780037741.01 | 0.822510 | 2.279479e-53 | 1.911928e-50 |
| MsG0180004835.01 | MsG0780037741.01 | 0.821711 | 3.491541e-53 | 2.862515e-50 |
| MsG0180004995.01 | MsG0780037741.01 | 0.803546 | 3.310756e-49 | 1.668421e-46 |
| MsG0180005048.01 | MsG0780037741.01 | 0.831114 | 2.005038e-55 | 2.154928e-52 |
| MsG0180005655.01 | MsG0780037741.01 | 0.809387 | 1.940378e-50 | 1.137751e-47 |
| MsG0180006133.01 | MsG0780037741.01 | 0.860598 | 1.847599e-63 | 5.078350e-60 |
| MsG0280010579.01 | MsG0780037741.01 | 0.874585 | 6.022466e-68 | 2.725671e-64 |
| MsG0380012118.01 | MsG0780037741.01 | 0.808252 | 3.393752e-50 | 1.931082e-47 |
| MsG0380012788.01 | MsG0780037741.01 | 0.812413 | 4.292739e-51 | 2.727733e-48 |
| MsG0380012808.01 | MsG0780037741.01 | 0.815569 | 8.644878e-52 | 5.981718e-49 |
| MsG0380012956.01 | MsG0780037741.01 | 0.809865 | 1.531655e-50 | 9.095162e-48 |
| MsG0380013584.01 | MsG0780037741.01 | 0.839714 | 1.342970e-57 | 1.870329e-54 |
| MsG0380014542.01 | MsG0780037741.01 | 0.821195 | 4.593762e-53 | 3.712363e-50 |
| MsG0380014666.01 | MsG0780037741.01 | 0.850273 | 1.889105e-60 | 3.680466e-57 |
| MsG0380014751.01 | MsG0780037741.01 | 0.808507 | 2.993612e-50 | 1.714784e-47 |
| MsG0680031616.01 | MsG0780037741.01 | 0.810290 | 1.240815e-50 | 7.450002e-48 |
| MsG0680032772.01 | MsG0780037741.01 | 0.829793 | 4.220580e-55 | 4.365244e-52 |
| MsG0680032773.01 | MsG0780037741.01 | 0.806112 | 9.636748e-50 | 5.187242e-47 |
| MsG0680033696.01 | MsG0780037741.01 | 0.827731 | 1.330367e-54 | 1.295292e-51 |
| MsG0680035350.01 | MsG0780037741.01 | 0.867530 | 1.279110e-65 | 4.480355e-62 |
| MsG0480018526.01 | MsG0780037741.01 | 0.845159 | 4.832461e-59 | 7.980934e-56 |
| MsG0480018785.01 | MsG0780037741.01 | 0.858010 | 1.104506e-62 | 2.778822e-59 |
| MsG0480020398.01 | MsG0780037741.01 | 0.817170 | 3.788724e-52 | 2.738997e-49 |
| MsG0480020856.01 | MsG0780037741.01 | 0.838706 | 2.452317e-57 | 3.311863e-54 |
| MsG0480020921.01 | MsG0780037741.01 | 0.807656 | 4.544603e-50 | 2.545560e-47 |
| MsG0480021016.01 | MsG0780037741.01 | 0.829307 | 5.539563e-55 | 5.648901e-52 |
| MsG0480021100.01 | MsG0780037741.01 | 0.800707 | 1.270420e-48 | 5.955612e-46 |
| MsG0480021301.01 | MsG0780037741.01 | 0.833156 | 6.271071e-56 | 7.161292e-53 |
| MsG0480021773.01 | MsG0780037741.01 | 0.847086 | 1.444403e-59 | 2.538762e-56 |
| MsG0480021901.01 | MsG0780037741.01 | 0.837497 | 5.018681e-57 | 6.531570e-54 |
| MsG0480021902.01 | MsG0780037741.01 | 0.867090 | 1.767357e-65 | 6.094149e-62 |
| MsG0480022307.01 | MsG0780037741.01 | 0.813860 | 2.066851e-51 | 1.365242e-48 |
| MsG0480022559.01 | MsG0780037741.01 | 0.842825 | 2.041130e-58 | 3.132289e-55 |
| MsG0480022784.01 | MsG0780037741.01 | 0.878650 | 2.364986e-69 | 1.244770e-65 |
| MsG0480022982.01 | MsG0780037741.01 | 0.806780 | 6.966280e-50 | 3.814327e-47 |
| MsG0480022991.01 | MsG0780037741.01 | 0.861098 | 1.302676e-63 | 3.642592e-60 |
| MsG0480022992.01 | MsG0780037741.01 | 0.829150 | 6.047996e-55 | 6.137587e-52 |
| MsG0480023003.01 | MsG0780037741.01 | 0.872137 | 4.005947e-67 | 1.657509e-63 |
| MsG0480023194.01 | MsG0780037741.01 | 0.813107 | 3.025183e-51 | 1.957711e-48 |
| MsG0480023262.01 | MsG0780037741.01 | 0.808612 | 2.843079e-50 | 1.632921e-47 |
| MsG0480023296.01 | MsG0780037741.01 | 0.870755 | 1.147767e-66 | 4.516054e-63 |
| MsG0480023424.01 | MsG0780037741.01 | 0.808376 | 3.192687e-50 | 1.822596e-47 |
| MsG0480023426.01 | MsG0780037741.01 | 0.835247 | 1.875028e-56 | 2.280028e-53 |
| MsG0480023653.01 | MsG0780037741.01 | 0.866053 | 3.776436e-65 | 1.255606e-61 |
| MsG0480023672.01 | MsG0780037741.01 | 0.865020 | 7.991198e-65 | 2.562166e-61 |
| MsG0480023679.01 | MsG0780037741.01 | 0.812366 | 4.396603e-51 | 2.790077e-48 |
| MsG0480023706.01 | MsG0780037741.01 | 0.853655 | 2.069581e-61 | 4.504111e-58 |
| MsG0580024060.01 | MsG0780037741.01 | 0.819853 | 9.336241e-53 | 7.268247e-50 |
| MsG0580024657.01 | MsG0780037741.01 | 0.809024 | 2.320726e-50 | 1.347544e-47 |
| MsG0580024742.01 | MsG0780037741.01 | 0.849976 | 2.288594e-60 | 4.415472e-57 |
| MsG0580024748.01 | MsG0780037741.01 | 0.810832 | 9.474363e-51 | 5.771538e-48 |
| MsG0580024787.01 | MsG0780037741.01 | 0.895657 | 7.784862e-76 | 8.151880e-72 |
| MsG0580024813.01 | MsG0780037741.01 | 0.831685 | 1.450843e-55 | 1.586110e-52 |
| MsG0580024954.01 | MsG0780037741.01 | 0.840838 | 6.832833e-58 | 9.854484e-55 |
| MsG0580025093.01 | MsG0780037741.01 | 0.810964 | 8.871041e-51 | 5.423488e-48 |
| MsG0580025177.01 | MsG0780037741.01 | 0.855115 | 7.830734e-62 | 1.788412e-58 |
| MsG0580025186.01 | MsG0780037741.01 | 0.857564 | 1.498364e-62 | 3.713909e-59 |
| MsG0580025203.01 | MsG0780037741.01 | 0.804671 | 1.931483e-49 | 1.001888e-46 |
| MsG0580025504.01 | MsG0780037741.01 | 0.811055 | 8.476181e-51 | 5.194316e-48 |
| MsG0580025506.01 | MsG0780037741.01 | 0.810216 | 1.286768e-50 | 7.711025e-48 |
| MsG0580025775.01 | MsG0780037741.01 | 0.874310 | 7.461383e-68 | 3.342352e-64 |
| MsG0380015090.01 | MsG0780037741.01 | 0.833313 | 5.730193e-56 | 6.574678e-53 |
| MsG0380015219.01 | MsG0780037741.01 | 0.847485 | 1.122392e-59 | 1.998039e-56 |
| MsG0380015340.01 | MsG0780037741.01 | 0.816928 | 4.294298e-52 | 3.084032e-49 |
| MsG0380015394.01 | MsG0780037741.01 | 0.862364 | 5.341312e-64 | 1.560190e-60 |
| MsG0380015954.01 | MsG0780037741.01 | 0.807432 | 5.069354e-50 | 2.823087e-47 |
| MsG0380016027.01 | MsG0780037741.01 | 0.850927 | 1.237246e-60 | 2.462832e-57 |
| MsG0380016091.01 | MsG0780037741.01 | 0.862699 | 4.212963e-64 | 1.245007e-60 |
| MsG0380016092.01 | MsG0780037741.01 | 0.826150 | 3.177501e-54 | 2.955546e-51 |
| MsG0380016217.01 | MsG0780037741.01 | 0.859136 | 5.094770e-63 | 1.331510e-59 |
| MsG0380016225.01 | MsG0780037741.01 | 0.850734 | 1.401709e-60 | 2.772463e-57 |
| MsG0380016722.01 | MsG0780037741.01 | 0.828907 | 6.925502e-55 | 6.977585e-52 |
| MsG0380017164.01 | MsG0780037741.01 | 0.846806 | 1.722987e-59 | 3.001188e-56 |
| MsG0380017282.01 | MsG0780037741.01 | 0.845695 | 3.458736e-59 | 5.812519e-56 |
| MsG0380017332.01 | MsG0780037741.01 | 0.811686 | 6.184741e-51 | 3.853333e-48 |
| MsG0380017361.01 | MsG0780037741.01 | 0.856166 | 3.865731e-62 | 9.142341e-59 |
| MsG0380017440.01 | MsG0780037741.01 | 0.809139 | 2.192726e-50 | 1.277238e-47 |
| MsG0380017605.01 | MsG0780037741.01 | 0.872004 | 4.435515e-67 | 1.825802e-63 |
| MsG0380017632.01 | MsG0780037741.01 | 0.851116 | 1.094273e-60 | 2.191776e-57 |
| MsG0580026141.01 | MsG0780037741.01 | 0.825307 | 5.035661e-54 | 4.572818e-51 |
| MsG0580026142.01 | MsG0780037741.01 | 0.830109 | 3.534375e-55 | 3.688368e-52 |
| MsG0580028756.01 | MsG0780037741.01 | 0.847022 | 1.504348e-59 | 2.638246e-56 |
| MsG0580028923.01 | MsG0780037741.01 | 0.847855 | 8.878197e-60 | 1.599138e-56 |
| MsG0580028927.01 | MsG0780037741.01 | 0.806911 | 6.536634e-50 | 3.591229e-47 |
| MsG0580028955.01 | MsG0780037741.01 | 0.836271 | 1.031967e-56 | 1.294161e-53 |
| MsG0580029102.01 | MsG0780037741.01 | 0.854138 | 1.502920e-61 | 3.324202e-58 |
| MsG0580029123.01 | MsG0780037741.01 | 0.838554 | 2.684061e-57 | 3.607764e-54 |
| MsG0580029197.01 | MsG0780037741.01 | 0.815747 | 7.888051e-52 | 5.485140e-49 |
| MsG0580029261.01 | MsG0780037741.01 | 0.860475 | 2.012299e-63 | 5.507955e-60 |
| MsG0580029591.01 | MsG0780037741.01 | 0.881507 | 2.266060e-70 | 1.331176e-66 |
| MsG0280006540.01 | MsG0780037741.01 | 0.859856 | 3.097031e-63 | 8.298505e-60 |
| MsG0280006563.01 | MsG0780037741.01 | 0.873998 | 9.521347e-68 | 4.216142e-64 |
| MsG0280007359.01 | MsG0780037741.01 | 0.834607 | 2.718416e-56 | 3.242394e-53 |
| MsG0280009752.01 | MsG0780037741.01 | 0.839935 | 1.176206e-57 | 1.649515e-54 |
| MsG0280009866.01 | MsG0780037741.01 | 0.825784 | 3.880595e-54 | 3.572370e-51 |
| MsG0680035776.01 | MsG0780037741.01 | 0.838694 | 2.469094e-57 | 3.333177e-54 |
| MsG0680035878.01 | MsG0780037741.01 | 0.822497 | 2.295076e-53 | 1.924236e-50 |
| MsG0780036534.01 | MsG0780037741.01 | 0.850698 | 1.435411e-60 | 2.835559e-57 |
| MsG0780037158.01 | MsG0780037741.01 | 0.810876 | 9.266845e-51 | 5.652006e-48 |
| MsG0780037741.01 | MsG0780038393.01 | 0.805855 | 1.090972e-49 | 5.834368e-47 |
| MsG0780037741.01 | MsG0780038402.01 | 0.836936 | 6.984961e-57 | 8.935757e-54 |
| MsG0780037741.01 | MsG0780038736.01 | 0.851953 | 6.343183e-61 | 1.304918e-57 |
| MsG0780037741.01 | MsG0780039861.01 | 0.884264 | 2.224793e-71 | 1.458272e-67 |
| MsG0780037741.01 | MsG0780040364.01 | 0.845292 | 4.448588e-59 | 7.379118e-56 |
| MsG0780037741.01 | MsG0780040474.01 | 0.810290 | 1.240782e-50 | 7.449830e-48 |
| MsG0780037741.01 | MsG0780040620.01 | 0.880493 | 5.244615e-70 | 2.962111e-66 |
| MsG0780037741.01 | MsG0780040641.01 | 0.880512 | 5.163439e-70 | 2.918900e-66 |
| MsG0780037741.01 | MsG0780040899.01 | 0.811357 | 7.290666e-51 | 4.503030e-48 |
| MsG0780037741.01 | MsG0780041008.01 | 0.801365 | 9.319285e-49 | 4.442496e-46 |
| MsG0780037741.01 | MsG0780041132.01 | 0.829656 | 4.555759e-55 | 4.692721e-52 |
| MsG0780037741.01 | MsG0780041141.01 | 0.833486 | 5.189114e-56 | 5.984390e-53 |
| MsG0780037741.01 | MsG0780041142.01 | 0.823171 | 1.598671e-53 | 1.366188e-50 |
| MsG0780037741.01 | MsG0780041143.01 | 0.864039 | 1.619076e-64 | 5.012489e-61 |
| MsG0780037741.01 | MsG0780041273.01 | 0.825083 | 5.686038e-54 | 5.130957e-51 |
| MsG0780037741.01 | MsG0780041340.01 | 0.865185 | 7.091776e-65 | 2.286731e-61 |
| MsG0780037741.01 | MsG0780041359.01 | 0.889806 | 1.740968e-73 | 1.426008e-69 |
| MsG0780037741.01 | MsG0880041930.01 | 0.801373 | 9.286278e-49 | 4.427538e-46 |
| MsG0780037741.01 | MsG0880042906.01 | 0.801678 | 8.039108e-49 | 3.862394e-46 |
| MsG0780037741.01 | MsG0880043684.01 | 0.811557 | 6.594650e-51 | 4.095020e-48 |
| MsG0780037741.01 | MsG0880043714.01 | 0.815729 | 7.961246e-52 | 5.533326e-49 |
| MsG0780037741.01 | MsG0880043752.01 | 0.840552 | 8.116688e-58 | 1.160296e-54 |
| MsG0780037741.01 | MsG0880044103.01 | 0.803483 | 3.412000e-49 | 1.716622e-46 |
| MsG0780037741.01 | MsG0880044766.01 | 0.804784 | 1.829291e-49 | 9.516826e-47 |
| MsG0780037741.01 | MsG0880045439.01 | 0.806135 | 9.528113e-50 | 5.131855e-47 |
| MsG0780037741.01 | MsG0880045612.01 | 0.904154 | 1.651106e-79 | 2.521039e-75 |
| MsG0780037741.01 | MsG0880045647.01 | 0.872920 | 2.195058e-67 | 9.346021e-64 |
| MsG0780037741.01 | MsG0880046208.01 | 0.803290 | 3.741126e-49 | 1.872813e-46 |
| MsG0780037741.01 | MsG0880046431.01 | 0.806700 | 7.242904e-50 | 3.957636e-47 |
| MsG0780037741.01 | MsG0880046646.01 | 0.846844 | 1.682675e-59 | 2.934384e-56 |
| MsG0780037741.01 | MsG0880046885.01 | 0.825459 | 4.634083e-54 | 4.226136e-51 |
| MsG0780037741.01 | MsG0880046904.01 | 0.886526 | 3.167568e-72 | 2.270776e-68 |
| MsG0780037741.01 | MsG0880046905.01 | 0.849269 | 3.602712e-60 | 6.793226e-57 |
| MsG0780037741.01 | MsG0880046906.01 | 0.821599 | 3.707156e-53 | 3.029410e-50 |
| MsG0780037741.01 | MsG0880046993.01 | 0.800532 | 1.379104e-48 | 6.436682e-46 |
| MsG0780037741.01 | MsG0880047447.01 | 0.813618 | 2.336030e-51 | 1.533049e-48 |
| MsG0780037741.01 | MsG0880047640.01 | 0.815474 | 9.075068e-52 | 6.263483e-49 |
| MsG0780037741.01 | MsG0880047649.01 | 0.896014 | 5.536342e-76 | 5.878483e-72 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037741.01.T01 | MTR_7g035445 | 75.556 | 315 | 44 | 6 | 1 | 284 | 24 | 336 | 7.58e-158 | 445 |
| MsG0780037741.01.T01 | MTR_7g035455 | 44.444 | 126 | 27 | 2 | 101 | 192 | 123 | 239 | 4.25e-23 | 95.5 |
| MsG0780037741.01.T01 | MTR_1g093975 | 37.037 | 108 | 42 | 2 | 111 | 193 | 1 | 107 | 1.19e-14 | 70.1 |
| MsG0780037741.01.T01 | MTR_1g094005 | 37.037 | 108 | 42 | 2 | 111 | 193 | 1 | 107 | 1.19e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037741.01.T01 | AT3G27330 | 39.785 | 279 | 126 | 7 | 4 | 241 | 596 | 873 | 2.91e-37 | 140 |
Find 86 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGCTTCTCTAATATTTA+AGG | 0.118236 | 7:-32504374 | None:intergenic |
| TTATTGTAAAATGCTGTTTC+TGG | 0.158375 | 7:-32504412 | None:intergenic |
| CTTCAATTTCTTGAGGAAAT+AGG | 0.192262 | 7:-32504330 | None:intergenic |
| CAGGGGTATCTTCAACAATT+AGG | 0.202307 | 7:-32502698 | None:intergenic |
| TTAATGATAATTACCTTTCT+TGG | 0.217346 | 7:-32503091 | None:intergenic |
| TAAAATGCTGTTTCTGGAAT+TGG | 0.263282 | 7:-32504406 | None:intergenic |
| TTCTGCTACTCTTCCTTGTA+TGG | 0.310705 | 7:+32503661 | MsG0780037741.01.T01:CDS |
| TGACCACAAGGAGTGGTATT+TGG | 0.315816 | 7:-32503829 | None:intergenic |
| TAATGATAATTACCTTTCTT+GGG | 0.320688 | 7:-32503090 | None:intergenic |
| CAAGTAGGGGTATGAATTCT+AGG | 0.342271 | 7:+32504467 | MsG0780037741.01.T01:CDS |
| TGCTGCTGCTATGGCTGGTT+GGG | 0.344885 | 7:+32502650 | MsG0780037741.01.T01:CDS |
| TCGTTGTTGTCGATGTTCTA+TGG | 0.348545 | 7:-32504573 | None:intergenic |
| GTGTAAGAGGGAGGACAAGA+AGG | 0.357536 | 7:+32504644 | MsG0780037741.01.T01:CDS |
| ATACCCCTACTTGATGGATA+TGG | 0.366991 | 7:-32504457 | None:intergenic |
| TCGTGATTACCTTGATGAAT+TGG | 0.368677 | 7:-32502780 | None:intergenic |
| AGGGGTATCTTCAACAATTA+GGG | 0.379967 | 7:-32502697 | None:intergenic |
| TGATAAGCGAAGCCATGTTT+TGG | 0.386216 | 7:-32502611 | None:intergenic |
| CTCGCAACGAACAATGTTAC+TGG | 0.388357 | 7:-32502510 | None:intergenic |
| GAATTCATACCCCTACTTGA+TGG | 0.390998 | 7:-32504463 | None:intergenic |
| GCTGAATGCTTCTATTCCTT+CGG | 0.391782 | 7:-32504435 | None:intergenic |
| GGATGATGAGGATGCTGAAT+TGG | 0.392042 | 7:+32504510 | MsG0780037741.01.T01:CDS |
| TGTAAGAGGGAGGACAAGAA+GGG | 0.397476 | 7:+32504645 | MsG0780037741.01.T01:CDS |
| AGGAGTAACAGCGACGAAAA+TGG | 0.408932 | 7:+32502531 | MsG0780037741.01.T01:five_prime_UTR |
| AGGAAGTAAAGTAGGAGAAA+AGG | 0.414168 | 7:+32503598 | MsG0780037741.01.T01:CDS |
| TTTATTAGCTAGAAAATTTG+AGG | 0.422395 | 7:+32504773 | MsG0780037741.01.T01:three_prime_UTR |
| CTGCTGCTGCTATGGCTGGT+TGG | 0.431944 | 7:+32502649 | MsG0780037741.01.T01:CDS |
| TCCACCACAACCGATTGTTC+TGG | 0.433857 | 7:+32503047 | MsG0780037741.01.T01:CDS |
| TCATCATCAATAAGTGTAAG+AGG | 0.433883 | 7:+32504631 | MsG0780037741.01.T01:CDS |
| TTAGAATCTCGATCTCGATC+AGG | 0.437867 | 7:-32502717 | None:intergenic |
| AGGATGCTGAATTGGCTAGA+AGG | 0.444958 | 7:+32504518 | MsG0780037741.01.T01:CDS |
| AAGATGCTGCATATGCTCTA+AGG | 0.446798 | 7:+32504685 | MsG0780037741.01.T01:CDS |
| TCGACAACAACGAGGGTTCA+TGG | 0.454204 | 7:+32504583 | MsG0780037741.01.T01:CDS |
| GCTAGAAAATTTGAGGGCTA+TGG | 0.460419 | 7:+32504780 | MsG0780037741.01.T01:three_prime_UTR |
| AAATCTGCTGCTGCTATGGC+TGG | 0.467802 | 7:+32502645 | MsG0780037741.01.T01:CDS |
| AGAAAAGGAATTGATTCAGA+AGG | 0.468886 | 7:+32503613 | MsG0780037741.01.T01:CDS |
| GTTAATGAAGGAAGTAAAGT+AGG | 0.469630 | 7:+32503590 | MsG0780037741.01.T01:CDS |
| ATTCAAATCTGCTGCTGCTA+TGG | 0.473535 | 7:+32502641 | MsG0780037741.01.T01:CDS |
| CATATGCAGCATCTTCATCT+TGG | 0.475564 | 7:-32504677 | None:intergenic |
| GAGAAACGAGGCAATAGTAC+TGG | 0.491629 | 7:+32504489 | MsG0780037741.01.T01:CDS |
| GGGTTCATGGTGGTAATTCA+AGG | 0.501442 | 7:+32504596 | MsG0780037741.01.T01:CDS |
| TCTCTTAGCTTATCCATACA+AGG | 0.507539 | 7:-32503674 | None:intergenic |
| TGTTTAGGAAACGCAGAGCT+AGG | 0.509681 | 7:+32503022 | MsG0780037741.01.T01:intron |
| TTATTAGCTAGAAAATTTGA+GGG | 0.518168 | 7:+32504774 | MsG0780037741.01.T01:three_prime_UTR |
| TCATCGAGATCCAGAACAAT+CGG | 0.518971 | 7:-32503057 | None:intergenic |
| GCAGCAGCAGATTTGAATCT+CGG | 0.519442 | 7:-32502636 | None:intergenic |
| TTCCTAGCTTCAATTTCTTG+AGG | 0.521825 | 7:-32504337 | None:intergenic |
| TGGAGGAAGATGACTGTGCC+TGG | 0.521867 | 7:-32504749 | None:intergenic |
| TACACTTATTGATGATGATG+AGG | 0.524665 | 7:-32504626 | None:intergenic |
| AATGATAATTACCTTTCTTG+GGG | 0.530697 | 7:-32503089 | None:intergenic |
| ATTGTTCTGGATCTCGATGA+AGG | 0.541428 | 7:+32503060 | MsG0780037741.01.T01:CDS |
| GTAAGAGGGAGGACAAGAAG+GGG | 0.556548 | 7:+32504646 | MsG0780037741.01.T01:CDS |
| AGGTTACAGAGAGAACTTGA+TGG | 0.557645 | 7:+32504538 | MsG0780037741.01.T01:CDS |
| TAGAATCTCGATCTCGATCA+GGG | 0.558922 | 7:-32502716 | None:intergenic |
| ATACCACTCCTTGTGGTCAC+AGG | 0.561205 | 7:+32503833 | MsG0780037741.01.T01:CDS |
| TTCAGCCATATCCATCAAGT+AGG | 0.563313 | 7:+32504452 | MsG0780037741.01.T01:CDS |
| GGCTATGGCAACGAGAGCGA+TGG | 0.565542 | 7:+32504795 | MsG0780037741.01.T01:three_prime_UTR |
| TGCTCTAAGGCTGCAAAGAG+AGG | 0.569070 | 7:+32504698 | MsG0780037741.01.T01:exon |
| CTCCGCTCTCCAATTCATCA+AGG | 0.571744 | 7:+32502771 | MsG0780037741.01.T01:CDS |
| TAAGAGGGAGGACAAGAAGG+GGG | 0.572522 | 7:+32504647 | MsG0780037741.01.T01:CDS |
| CAGTAACATTGTTCGTTGCG+AGG | 0.573443 | 7:+32502511 | MsG0780037741.01.T01:five_prime_UTR |
| GAAAAGGAATTGATTCAGAA+GGG | 0.573764 | 7:+32503614 | MsG0780037741.01.T01:CDS |
| TTCCTCAAGAAATTGAAGCT+AGG | 0.577378 | 7:+32504335 | MsG0780037741.01.T01:CDS |
| TCCAGAACAATCGGTTGTGG+TGG | 0.581128 | 7:-32503048 | None:intergenic |
| TCAGCCATATCCATCAAGTA+GGG | 0.584477 | 7:+32504453 | MsG0780037741.01.T01:CDS |
| AGATCCAGAACAATCGGTTG+TGG | 0.586599 | 7:-32503051 | None:intergenic |
| ACATCCTTCGATCTCTGATA+CGG | 0.590959 | 7:-32504822 | None:intergenic |
| ACGATCGTGCACTGTGAACA+CGG | 0.594261 | 7:+32504285 | MsG0780037741.01.T01:CDS |
| CATCATCAATAAGTGTAAGA+GGG | 0.598286 | 7:+32504632 | MsG0780037741.01.T01:CDS |
| GGCAATAGTACTGGATGATG+AGG | 0.609153 | 7:+32504498 | MsG0780037741.01.T01:CDS |
| TACCTTGATGAATTGGAGAG+CGG | 0.617422 | 7:-32502773 | None:intergenic |
| ATTTAATACCTGTGACCACA+AGG | 0.619480 | 7:-32503841 | None:intergenic |
| GCACTGTGAACACGGTTCTG+TGG | 0.620825 | 7:+32504293 | MsG0780037741.01.T01:CDS |
| ATGATAATTACCTTTCTTGG+GGG | 0.621971 | 7:-32503088 | None:intergenic |
| GAGCCAAATACCACTCCTTG+TGG | 0.643544 | 7:+32503826 | MsG0780037741.01.T01:CDS |
| ATACCTGTGACCACAAGGAG+TGG | 0.653809 | 7:-32503836 | None:intergenic |
| AGTAACAGCGACGAAAATGG+TGG | 0.656029 | 7:+32502534 | MsG0780037741.01.T01:five_prime_UTR |
| CATCAATAAGTGTAAGAGGG+AGG | 0.669182 | 7:+32504635 | MsG0780037741.01.T01:CDS |
| ATGTAGTAATGATGACAACA+AGG | 0.671143 | 7:+32504841 | MsG0780037741.01.T01:three_prime_UTR |
| CAGCCATATCCATCAAGTAG+GGG | 0.675531 | 7:+32504454 | MsG0780037741.01.T01:CDS |
| AGCGACGAATAGCCAAAACA+TGG | 0.697063 | 7:+32502599 | MsG0780037741.01.T01:exon |
| AGAATCTCGATCTCGATCAG+GGG | 0.709311 | 7:-32502715 | None:intergenic |
| TAGAACATCGACAACAACGA+GGG | 0.710209 | 7:+32504576 | MsG0780037741.01.T01:CDS |
| ATCTCCGTATCAGAGATCGA+AGG | 0.721601 | 7:+32504818 | MsG0780037741.01.T01:three_prime_UTR |
| TATGAATTCTAGGAGAAACG+AGG | 0.760550 | 7:+32504477 | MsG0780037741.01.T01:CDS |
| ATAGAACATCGACAACAACG+AGG | 0.769880 | 7:+32504575 | MsG0780037741.01.T01:CDS |
| ACAACAACGAGGGTTCATGG+TGG | 0.784670 | 7:+32504586 | MsG0780037741.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAAGAATATTGTTAAT+TGG | + | Chr7:32502959-32502978 | MsG0780037741.01.T01:intron | 10.0% |
| !!! | TAATTATCATTAATTTTGAT+TGG | + | Chr7:32503101-32503120 | MsG0780037741.01.T01:intron | 10.0% |
| !!! | TTTTTTATTCTATTTTGTTT+TGG | + | Chr7:32503728-32503747 | MsG0780037741.01.T01:intron | 10.0% |
| !! | AAAAAAACATCAAATTCAAA+TGG | - | Chr7:32502839-32502858 | None:intergenic | 15.0% |
| !! | AAAAAACATCAAATTCAAAT+GGG | - | Chr7:32502838-32502857 | None:intergenic | 15.0% |
| !!! | AAATTTTCTAGCTAATAAAT+TGG | - | Chr7:32504772-32504791 | None:intergenic | 15.0% |
| !!! | AATTGGATTAGTTTAATTAA+TGG | + | Chr7:32502976-32502995 | MsG0780037741.01.T01:intron | 15.0% |
| !!! | ATTGGATTAGTTTAATTAAT+GGG | + | Chr7:32502977-32502996 | MsG0780037741.01.T01:intron | 15.0% |
| !!! | TTATACTAAAAGTTTTACAT+AGG | + | Chr7:32503918-32503937 | MsG0780037741.01.T01:intron | 15.0% |
| !!! | TTTGAATTTGATGTTTTTTT+TGG | + | Chr7:32502839-32502858 | MsG0780037741.01.T01:intron | 15.0% |
| !! | AAGAAAAATTGTGTTAATGA+AGG | + | Chr7:32503578-32503597 | MsG0780037741.01.T01:CDS | 20.0% |
| !! | TAATGATAATTACCTTTCTT+GGG | - | Chr7:32503093-32503112 | None:intergenic | 20.0% |
| !! | TTAATGATAATTACCTTTCT+TGG | - | Chr7:32503094-32503113 | None:intergenic | 20.0% |
| !! | TTATTAGCTAGAAAATTTGA+GGG | + | Chr7:32504774-32504793 | MsG0780037741.01.T01:three_prime_UTR | 20.0% |
| !! | TTTATTAGCTAGAAAATTTG+AGG | + | Chr7:32504773-32504792 | MsG0780037741.01.T01:three_prime_UTR | 20.0% |
| !!! | AATTTTGATTGGTCTAAAAT+TGG | + | Chr7:32503112-32503131 | MsG0780037741.01.T01:intron | 20.0% |
| !!! | ACTTTTAGTATAACTTCAAT+TGG | - | Chr7:32503911-32503930 | None:intergenic | 20.0% |
| !!! | ATATGCAAGCTTTTAAATTA+CGG | + | Chr7:32504127-32504146 | MsG0780037741.01.T01:intron | 20.0% |
| !!! | ATTTAAAACCATGCTTATAA+TGG | + | Chr7:32504189-32504208 | MsG0780037741.01.T01:intron | 20.0% |
| !!! | GATTTCATTAGTTTGTTATT+GGG | + | Chr7:32502896-32502915 | MsG0780037741.01.T01:intron | 20.0% |
| !!! | TGATTTCATTAGTTTGTTAT+TGG | + | Chr7:32502895-32502914 | MsG0780037741.01.T01:intron | 20.0% |
| !!! | TGATTTTGTGTGTTAAATAT+TGG | + | Chr7:32502931-32502950 | MsG0780037741.01.T01:intron | 20.0% |
| !!! | TTGGATTAGTTTAATTAATG+GGG | + | Chr7:32502978-32502997 | MsG0780037741.01.T01:intron | 20.0% |
| ! | AAAGAACACAATTGAAACTA+CGG | - | Chr7:32503319-32503338 | None:intergenic | 25.0% |
| ! | AATGATAATTACCTTTCTTG+GGG | - | Chr7:32503092-32503111 | None:intergenic | 25.0% |
| ! | CAATTCGTACAAAATCAATT+AGG | - | Chr7:32503950-32503969 | None:intergenic | 25.0% |
| ! | TGATTCCTAAATTTCTGATT+TGG | + | Chr7:32503968-32503987 | MsG0780037741.01.T01:intron | 25.0% |
| !! | TTCTCAAATTATTTTCAGTG+TGG | + | Chr7:32503423-32503442 | MsG0780037741.01.T01:intron | 25.0% |
| !!! | TGAATTGCTATTTTGTGTTT+AGG | + | Chr7:32503007-32503026 | MsG0780037741.01.T01:intron | 25.0% |
| !!! | TTATTGTAAAATGCTGTTTC+TGG | - | Chr7:32504415-32504434 | None:intergenic | 25.0% |
| !!! | TTTTCTAGCTAATAAATTGG+AGG | - | Chr7:32504769-32504788 | None:intergenic | 25.0% |
| AACAAGATCCATTATAAGCA+TGG | - | Chr7:32504200-32504219 | None:intergenic | 30.0% | |
| ATGATAATTACCTTTCTTGG+GGG | - | Chr7:32503091-32503110 | None:intergenic | 30.0% | |
| ATGTAGTAATGATGACAACA+AGG | + | Chr7:32504841-32504860 | MsG0780037741.01.T01:three_prime_UTR | 30.0% | |
| ATTGGCCAAATCAGAAATTT+AGG | - | Chr7:32503976-32503995 | None:intergenic | 30.0% | |
| CATCATCAATAAGTGTAAGA+GGG | + | Chr7:32504632-32504651 | MsG0780037741.01.T01:CDS | 30.0% | |
| CTAAATGCAGACAATTGATA+AGG | + | Chr7:32504056-32504075 | MsG0780037741.01.T01:intron | 30.0% | |
| CTTATCAATTGTCTGCATTT+AGG | - | Chr7:32504058-32504077 | None:intergenic | 30.0% | |
| CTTCAATTTCTTGAGGAAAT+AGG | - | Chr7:32504333-32504352 | None:intergenic | 30.0% | |
| GTAATTATATGAGTGTGAGT+CGG | - | Chr7:32503213-32503232 | None:intergenic | 30.0% | |
| GTTAATGAAGGAAGTAAAGT+AGG | + | Chr7:32503590-32503609 | MsG0780037741.01.T01:CDS | 30.0% | |
| TAAACTTTATCTTGCAGCAA+TGG | + | Chr7:32504262-32504281 | MsG0780037741.01.T01:intron | 30.0% | |
| TCATCATCAATAAGTGTAAG+AGG | + | Chr7:32504631-32504650 | MsG0780037741.01.T01:CDS | 30.0% | |
| TTCTACAAAAGCTGCAAAAT+TGG | - | Chr7:32503994-32504013 | None:intergenic | 30.0% | |
| ! | AGAAAAGGAATTGATTCAGA+AGG | + | Chr7:32503613-32503632 | MsG0780037741.01.T01:CDS | 30.0% |
| ! | GAAAAGGAATTGATTCAGAA+GGG | + | Chr7:32503614-32503633 | MsG0780037741.01.T01:CDS | 30.0% |
| ! | TGCTGCTTCTCTAATATTTA+AGG | - | Chr7:32504377-32504396 | None:intergenic | 30.0% |
| !! | AGTTTGTTATTGGGTTGATT+TGG | + | Chr7:32502905-32502924 | MsG0780037741.01.T01:intron | 30.0% |
| !! | TAAAATGCTGTTTCTGGAAT+TGG | - | Chr7:32504409-32504428 | None:intergenic | 30.0% |
| !! | TACACTTATTGATGATGATG+AGG | - | Chr7:32504629-32504648 | None:intergenic | 30.0% |
| AGGAAGTAAAGTAGGAGAAA+AGG | + | Chr7:32503598-32503617 | MsG0780037741.01.T01:CDS | 35.0% | |
| ATTTAATACCTGTGACCACA+AGG | - | Chr7:32503844-32503863 | None:intergenic | 35.0% | |
| TATTATCAGTGTGATCAGTG+TGG | + | Chr7:32503257-32503276 | MsG0780037741.01.T01:intron | 35.0% | |
| TCGTGATTACCTTGATGAAT+TGG | - | Chr7:32502783-32502802 | None:intergenic | 35.0% | |
| TCTCTTAGCTTATCCATACA+AGG | - | Chr7:32503677-32503696 | None:intergenic | 35.0% | |
| TTCCTAGCTTCAATTTCTTG+AGG | - | Chr7:32504340-32504359 | None:intergenic | 35.0% | |
| TTCCTCAAGAAATTGAAGCT+AGG | + | Chr7:32504335-32504354 | MsG0780037741.01.T01:CDS | 35.0% | |
| ! | CAGCATTTTACAATAACCGA+AGG | + | Chr7:32504419-32504438 | MsG0780037741.01.T01:CDS | 35.0% |
| ! | GTTGTTGATGAACAGATAGT+GGG | + | Chr7:32503541-32503560 | MsG0780037741.01.T01:intron | 35.0% |
| ! | GTTGTTGTTGATGAACAGAT+AGG | + | Chr7:32503353-32503372 | MsG0780037741.01.T01:intron | 35.0% |
| ! | TATGAATTCTAGGAGAAACG+AGG | + | Chr7:32504477-32504496 | MsG0780037741.01.T01:CDS | 35.0% |
| ! | TGTTGTTGATGAACAGATAG+TGG | + | Chr7:32503355-32503374 | MsG0780037741.01.T01:intron | 35.0% |
| !! | AGGGGTATCTTCAACAATTA+GGG | - | Chr7:32502700-32502719 | None:intergenic | 35.0% |
| !! | TATTCGTCGCTGTTTTCTTT+CGG | - | Chr7:32502590-32502609 | None:intergenic | 35.0% |
| AAGATGCTGCATATGCTCTA+AGG | + | Chr7:32504685-32504704 | MsG0780037741.01.T01:CDS | 40.0% | |
| ACATCCTTCGATCTCTGATA+CGG | - | Chr7:32504825-32504844 | None:intergenic | 40.0% | |
| AGGTTACAGAGAGAACTTGA+TGG | + | Chr7:32504538-32504557 | MsG0780037741.01.T01:CDS | 40.0% | |
| ATAGAACATCGACAACAACG+AGG | + | Chr7:32504575-32504594 | MsG0780037741.01.T01:CDS | 40.0% | |
| ATGAACACGTATCCAACACT+GGG | - | Chr7:32503188-32503207 | None:intergenic | 40.0% | |
| ATTATATGAGTGTCCGACAC+TGG | - | Chr7:32503385-32503404 | None:intergenic | 40.0% | |
| ATTCAAATCTGCTGCTGCTA+TGG | + | Chr7:32502641-32502660 | MsG0780037741.01.T01:CDS | 40.0% | |
| CATATGCAGCATCTTCATCT+TGG | - | Chr7:32504680-32504699 | None:intergenic | 40.0% | |
| CATCAATAAGTGTAAGAGGG+AGG | + | Chr7:32504635-32504654 | MsG0780037741.01.T01:CDS | 40.0% | |
| GAATTCATACCCCTACTTGA+TGG | - | Chr7:32504466-32504485 | None:intergenic | 40.0% | |
| GCTAGAAAATTTGAGGGCTA+TGG | + | Chr7:32504780-32504799 | MsG0780037741.01.T01:three_prime_UTR | 40.0% | |
| GCTGAATGCTTCTATTCCTT+CGG | - | Chr7:32504438-32504457 | None:intergenic | 40.0% | |
| TACCTTGATGAATTGGAGAG+CGG | - | Chr7:32502776-32502795 | None:intergenic | 40.0% | |
| TAGAACATCGACAACAACGA+GGG | + | Chr7:32504576-32504595 | MsG0780037741.01.T01:CDS | 40.0% | |
| TAGAATCTCGATCTCGATCA+GGG | - | Chr7:32502719-32502738 | None:intergenic | 40.0% | |
| TCAGCCATATCCATCAAGTA+GGG | + | Chr7:32504453-32504472 | MsG0780037741.01.T01:CDS | 40.0% | |
| TCATCGAGATCCAGAACAAT+CGG | - | Chr7:32503060-32503079 | None:intergenic | 40.0% | |
| TCGTTGTTGTCGATGTTCTA+TGG | - | Chr7:32504576-32504595 | None:intergenic | 40.0% | |
| TTAGAATCTCGATCTCGATC+AGG | - | Chr7:32502720-32502739 | None:intergenic | 40.0% | |
| TTATATGAGTGTCCGACACT+GGG | - | Chr7:32503384-32503403 | None:intergenic | 40.0% | |
| TTCAGCCATATCCATCAAGT+AGG | + | Chr7:32504452-32504471 | MsG0780037741.01.T01:CDS | 40.0% | |
| TTCTGCTACTCTTCCTTGTA+TGG | + | Chr7:32503661-32503680 | MsG0780037741.01.T01:CDS | 40.0% | |
| ! | AGCTTTTACTAGTAGAAGCC+AGG | + | Chr7:32504731-32504750 | MsG0780037741.01.T01:three_prime_UTR | 40.0% |
| ! | ATACCCCTACTTGATGGATA+TGG | - | Chr7:32504460-32504479 | None:intergenic | 40.0% |
| ! | ATTGTTCTGGATCTCGATGA+AGG | + | Chr7:32503060-32503079 | MsG0780037741.01.T01:CDS | 40.0% |
| ! | CAAGTAGGGGTATGAATTCT+AGG | + | Chr7:32504467-32504486 | MsG0780037741.01.T01:CDS | 40.0% |
| ! | TGATAAGCGAAGCCATGTTT+TGG | - | Chr7:32502614-32502633 | None:intergenic | 40.0% |
| !! | CAGGGGTATCTTCAACAATT+AGG | - | Chr7:32502701-32502720 | None:intergenic | 40.0% |
| ACAGACACAGACTCAAACAC+AGG | - | Chr7:32503471-32503490 | None:intergenic | 45.0% | |
| AGAATCTCGATCTCGATCAG+GGG | - | Chr7:32502718-32502737 | None:intergenic | 45.0% | |
| AGATCCAGAACAATCGGTTG+TGG | - | Chr7:32503054-32503073 | None:intergenic | 45.0% | |
| AGATCTGCTGCAGACAAATG+TGG | + | Chr7:32504022-32504041 | MsG0780037741.01.T01:intron | 45.0% | |
| AGCGACGAATAGCCAAAACA+TGG | + | Chr7:32502599-32502618 | MsG0780037741.01.T01:exon | 45.0% | |
| AGGAGTAACAGCGACGAAAA+TGG | + | Chr7:32502531-32502550 | MsG0780037741.01.T01:five_prime_UTR | 45.0% | |
| AGGATGCTGAATTGGCTAGA+AGG | + | Chr7:32504518-32504537 | MsG0780037741.01.T01:CDS | 45.0% | |
| AGTAACAGCGACGAAAATGG+TGG | + | Chr7:32502534-32502553 | MsG0780037741.01.T01:five_prime_UTR | 45.0% | |
| ATCTCCGTATCAGAGATCGA+AGG | + | Chr7:32504818-32504837 | MsG0780037741.01.T01:three_prime_UTR | 45.0% | |
| CAGCCATATCCATCAAGTAG+GGG | + | Chr7:32504454-32504473 | MsG0780037741.01.T01:CDS | 45.0% | |
| CAGTAACATTGTTCGTTGCG+AGG | + | Chr7:32502511-32502530 | MsG0780037741.01.T01:five_prime_UTR | 45.0% | |
| CATGAACACGTATCCAACAC+TGG | - | Chr7:32503189-32503208 | None:intergenic | 45.0% | |
| CTCGCAACGAACAATGTTAC+TGG | - | Chr7:32502513-32502532 | None:intergenic | 45.0% | |
| GAGAAACGAGGCAATAGTAC+TGG | + | Chr7:32504489-32504508 | MsG0780037741.01.T01:CDS | 45.0% | |
| GCACAGATACTCTTCGCATT+AGG | + | Chr7:32503157-32503176 | MsG0780037741.01.T01:intron | 45.0% | |
| GCAGCAGCAGATTTGAATCT+CGG | - | Chr7:32502639-32502658 | None:intergenic | 45.0% | |
| GGATGATGAGGATGCTGAAT+TGG | + | Chr7:32504510-32504529 | MsG0780037741.01.T01:CDS | 45.0% | |
| GGGTTCATGGTGGTAATTCA+AGG | + | Chr7:32504596-32504615 | MsG0780037741.01.T01:CDS | 45.0% | |
| TGACCACAAGGAGTGGTATT+TGG | - | Chr7:32503832-32503851 | None:intergenic | 45.0% | |
| TGTAAGAGGGAGGACAAGAA+GGG | + | Chr7:32504645-32504664 | MsG0780037741.01.T01:CDS | 45.0% | |
| TGTTTAGGAAACGCAGAGCT+AGG | + | Chr7:32503022-32503041 | MsG0780037741.01.T01:intron | 45.0% | |
| ! | CTGTTTTCTTTCGGATCACG+GGG | - | Chr7:32502581-32502600 | None:intergenic | 45.0% |
| ! | GGCAATAGTACTGGATGATG+AGG | + | Chr7:32504498-32504517 | MsG0780037741.01.T01:CDS | 45.0% |
| !! | CGCTGTTTTCTTTCGGATCA+CGG | - | Chr7:32502583-32502602 | None:intergenic | 45.0% |
| !! | GCTGTTTTCTTTCGGATCAC+GGG | - | Chr7:32502582-32502601 | None:intergenic | 45.0% |
| AAACTACGGAGCACAGACAC+AGG | - | Chr7:32503305-32503324 | None:intergenic | 50.0% | |
| AAATCTGCTGCTGCTATGGC+TGG | + | Chr7:32502645-32502664 | MsG0780037741.01.T01:CDS | 50.0% | |
| ACAACAACGAGGGTTCATGG+TGG | + | Chr7:32504586-32504605 | MsG0780037741.01.T01:CDS | 50.0% | |
| ACGATCGTGCACTGTGAACA+CGG | + | Chr7:32504285-32504304 | MsG0780037741.01.T01:CDS | 50.0% | |
| ATACCACTCCTTGTGGTCAC+AGG | + | Chr7:32503833-32503852 | MsG0780037741.01.T01:CDS | 50.0% | |
| ATACCTGTGACCACAAGGAG+TGG | - | Chr7:32503839-32503858 | None:intergenic | 50.0% | |
| CTCCGCTCTCCAATTCATCA+AGG | + | Chr7:32502771-32502790 | MsG0780037741.01.T01:CDS | 50.0% | |
| GAAGGAGAAACCCCCAAGAA+AGG | + | Chr7:32503078-32503097 | MsG0780037741.01.T01:CDS | 50.0% | |
| GAGCCAAATACCACTCCTTG+TGG | + | Chr7:32503826-32503845 | MsG0780037741.01.T01:CDS | 50.0% | |
| GTAAGAGGGAGGACAAGAAG+GGG | + | Chr7:32504646-32504665 | MsG0780037741.01.T01:CDS | 50.0% | |
| GTGTAAGAGGGAGGACAAGA+AGG | + | Chr7:32504644-32504663 | MsG0780037741.01.T01:CDS | 50.0% | |
| TAAGAGGGAGGACAAGAAGG+GGG | + | Chr7:32504647-32504666 | MsG0780037741.01.T01:CDS | 50.0% | |
| TCCACCACAACCGATTGTTC+TGG | + | Chr7:32503047-32503066 | MsG0780037741.01.T01:CDS | 50.0% | |
| TCCAGAACAATCGGTTGTGG+TGG | - | Chr7:32503051-32503070 | None:intergenic | 50.0% | |
| TCGACAACAACGAGGGTTCA+TGG | + | Chr7:32504583-32504602 | MsG0780037741.01.T01:CDS | 50.0% | |
| !! | TGCTCTAAGGCTGCAAAGAG+AGG | + | Chr7:32504698-32504717 | MsG0780037741.01.T01:exon | 50.0% |
| AGATAGGCGTGTCCCAGTGT+CGG | + | Chr7:32503369-32503388 | MsG0780037741.01.T01:intron | 55.0% | |
| CATTAGGCGTGTCCCAGTGT+TGG | + | Chr7:32503173-32503192 | MsG0780037741.01.T01:intron | 55.0% | |
| GAGGACAAGAAGGGGGTTTC+AGG | + | Chr7:32504654-32504673 | MsG0780037741.01.T01:CDS | 55.0% | |
| GCACTGTGAACACGGTTCTG+TGG | + | Chr7:32504293-32504312 | MsG0780037741.01.T01:CDS | 55.0% | |
| TGGAGGAAGATGACTGTGCC+TGG | - | Chr7:32504752-32504771 | None:intergenic | 55.0% | |
| ! | TGCTGCTGCTATGGCTGGTT+GGG | + | Chr7:32502650-32502669 | MsG0780037741.01.T01:CDS | 55.0% |
| CTGCTGCTGCTATGGCTGGT+TGG | + | Chr7:32502649-32502668 | MsG0780037741.01.T01:CDS | 60.0% | |
| GGCTATGGCAACGAGAGCGA+TGG | + | Chr7:32504795-32504814 | MsG0780037741.01.T01:three_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 32502479 | 32504954 | 32502479 | ID=MsG0780037741.01;Name=MsG0780037741.01 |
| Chr7 | mRNA | 32502479 | 32504954 | 32502479 | ID=MsG0780037741.01.T01;Parent=MsG0780037741.01;Name=MsG0780037741.01.T01;_AED=0.20;_eAED=0.20;_QI=139|0.5|0.6|1|1|1|5|249|291 |
| Chr7 | exon | 32504279 | 32504954 | 32504279 | ID=MsG0780037741.01.T01:exon:1050;Parent=MsG0780037741.01.T01 |
| Chr7 | exon | 32503805 | 32503854 | 32503805 | ID=MsG0780037741.01.T01:exon:1049;Parent=MsG0780037741.01.T01 |
| Chr7 | exon | 32503560 | 32503712 | 32503560 | ID=MsG0780037741.01.T01:exon:1048;Parent=MsG0780037741.01.T01 |
| Chr7 | exon | 32503029 | 32503099 | 32503029 | ID=MsG0780037741.01.T01:exon:1047;Parent=MsG0780037741.01.T01 |
| Chr7 | exon | 32502479 | 32502792 | 32502479 | ID=MsG0780037741.01.T01:exon:1046;Parent=MsG0780037741.01.T01 |
| Chr7 | five_prime_UTR | 32502479 | 32502617 | 32502479 | ID=MsG0780037741.01.T01:five_prime_utr;Parent=MsG0780037741.01.T01 |
| Chr7 | CDS | 32502618 | 32502792 | 32502618 | ID=MsG0780037741.01.T01:cds;Parent=MsG0780037741.01.T01 |
| Chr7 | CDS | 32503029 | 32503099 | 32503029 | ID=MsG0780037741.01.T01:cds;Parent=MsG0780037741.01.T01 |
| Chr7 | CDS | 32503560 | 32503712 | 32503560 | ID=MsG0780037741.01.T01:cds;Parent=MsG0780037741.01.T01 |
| Chr7 | CDS | 32503805 | 32503854 | 32503805 | ID=MsG0780037741.01.T01:cds;Parent=MsG0780037741.01.T01 |
| Chr7 | CDS | 32504279 | 32504705 | 32504279 | ID=MsG0780037741.01.T01:cds;Parent=MsG0780037741.01.T01 |
| Chr7 | three_prime_UTR | 32504706 | 32504954 | 32504706 | ID=MsG0780037741.01.T01:three_prime_utr;Parent=MsG0780037741.01.T01 |
| Gene Sequence |
| Protein sequence |
