Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029102.01.T01 | XP_003616526.1 | 96.701 | 576 | 17 | 1 | 1 | 574 | 1 | 576 | 0 | 1149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029102.01.T01 | F4K295 | 62.103 | 504 | 181 | 7 | 42 | 535 | 63 | 566 | 0 | 614 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029102.01.T01 | F6LPU5 | 96.701 | 576 | 17 | 1 | 1 | 574 | 1 | 576 | 0.0 | 1149 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0580029102.01 | 0.843863 | 1.078247e-58 | 1.709828e-55 |
| MsG0080048258.01 | MsG0580029102.01 | 0.820231 | 7.652168e-53 | 6.019987e-50 |
| MsG0080048775.01 | MsG0580029102.01 | 0.830051 | 3.651283e-55 | 3.803970e-52 |
| MsG0080048781.01 | MsG0580029102.01 | 0.806033 | 1.000888e-49 | 5.376852e-47 |
| MsG0180001293.01 | MsG0580029102.01 | 0.854897 | 9.060788e-62 | 2.054429e-58 |
| MsG0180001719.01 | MsG0580029102.01 | 0.810054 | 1.395076e-50 | 8.324993e-48 |
| MsG0180002218.01 | MsG0580029102.01 | 0.818900 | 1.539607e-52 | 1.167328e-49 |
| MsG0180002397.01 | MsG0580029102.01 | 0.835175 | 1.955115e-56 | 2.372035e-53 |
| MsG0180003485.01 | MsG0580029102.01 | 0.802465 | 5.538808e-49 | 2.715065e-46 |
| MsG0180003658.01 | MsG0580029102.01 | 0.813664 | 2.282992e-51 | 1.500073e-48 |
| MsG0180003698.01 | MsG0580029102.01 | 0.804203 | 2.417743e-49 | 1.239046e-46 |
| MsG0180003857.01 | MsG0580029102.01 | 0.830973 | 2.171706e-55 | 2.324401e-52 |
| MsG0180004120.01 | MsG0580029102.01 | 0.827288 | 1.699252e-54 | 1.633410e-51 |
| MsG0180004185.01 | MsG0580029102.01 | 0.814523 | 1.475235e-51 | 9.921918e-49 |
| MsG0180004299.01 | MsG0580029102.01 | 0.849837 | 2.502839e-60 | 4.806711e-57 |
| MsG0180004538.01 | MsG0580029102.01 | 0.834703 | 2.570748e-56 | 3.074629e-53 |
| MsG0180004583.01 | MsG0580029102.01 | 0.865107 | 7.502543e-65 | 2.412454e-61 |
| MsG0180005655.01 | MsG0580029102.01 | 0.815876 | 7.385836e-52 | 5.153401e-49 |
| MsG0180006133.01 | MsG0580029102.01 | 0.818172 | 2.251788e-52 | 1.673196e-49 |
| MsG0280010579.01 | MsG0580029102.01 | 0.804778 | 1.835058e-49 | 9.545170e-47 |
| MsG0380012956.01 | MsG0580029102.01 | 0.802849 | 4.615690e-49 | 2.284876e-46 |
| MsG0380013584.01 | MsG0580029102.01 | 0.818364 | 2.037541e-52 | 1.522151e-49 |
| MsG0380014542.01 | MsG0580029102.01 | 0.812215 | 4.743079e-51 | 2.997775e-48 |
| MsG0380014666.01 | MsG0580029102.01 | 0.857451 | 1.618269e-62 | 3.995886e-59 |
| MsG0480018526.01 | MsG0580029102.01 | 0.819596 | 1.068813e-52 | 8.261182e-50 |
| MsG0480018785.01 | MsG0580029102.01 | 0.804793 | 1.821490e-49 | 9.478424e-47 |
| MsG0480020856.01 | MsG0580029102.01 | 0.851850 | 6.781870e-61 | 1.390771e-57 |
| MsG0480021456.01 | MsG0580029102.01 | 0.809580 | 1.764035e-50 | 1.039691e-47 |
| MsG0480021773.01 | MsG0580029102.01 | 0.838963 | 2.103868e-57 | 2.863272e-54 |
| MsG0480021902.01 | MsG0580029102.01 | 0.864804 | 9.338594e-65 | 2.970079e-61 |
| MsG0480022378.01 | MsG0580029102.01 | 0.801191 | 1.011634e-48 | 4.801202e-46 |
| MsG0480022559.01 | MsG0580029102.01 | 0.853493 | 2.304752e-61 | 4.989154e-58 |
| MsG0480022784.01 | MsG0580029102.01 | 0.833288 | 5.813596e-56 | 6.664986e-53 |
| MsG0480022991.01 | MsG0580029102.01 | 0.819605 | 1.063856e-52 | 8.224670e-50 |
| MsG0480023003.01 | MsG0580029102.01 | 0.866293 | 3.170876e-65 | 1.063284e-61 |
| MsG0480023426.01 | MsG0580029102.01 | 0.804078 | 2.567502e-49 | 1.311662e-46 |
| MsG0480023672.01 | MsG0580029102.01 | 0.818713 | 1.698160e-52 | 1.280777e-49 |
| MsG0480023706.01 | MsG0580029102.01 | 0.811748 | 5.993570e-51 | 3.740565e-48 |
| MsG0580024060.01 | MsG0580029102.01 | 0.807765 | 4.307604e-50 | 2.419742e-47 |
| MsG0580024276.01 | MsG0580029102.01 | 0.818114 | 2.321099e-52 | 1.721950e-49 |
| MsG0580024742.01 | MsG0580029102.01 | 0.827973 | 1.163476e-54 | 1.140957e-51 |
| MsG0580024748.01 | MsG0580029102.01 | 0.818539 | 1.859740e-52 | 1.395984e-49 |
| MsG0580024787.01 | MsG0580029102.01 | 0.863039 | 3.308110e-64 | 9.890554e-61 |
| MsG0580025186.01 | MsG0580029102.01 | 0.857814 | 1.262714e-62 | 3.155844e-59 |
| MsG0580025504.01 | MsG0580029102.01 | 0.810201 | 1.296586e-50 | 7.766917e-48 |
| MsG0580025775.01 | MsG0580029102.01 | 0.866246 | 3.281105e-65 | 1.098432e-61 |
| MsG0380015090.01 | MsG0580029102.01 | 0.831919 | 1.270269e-55 | 1.398407e-52 |
| MsG0380015340.01 | MsG0580029102.01 | 0.839196 | 1.830641e-57 | 2.509382e-54 |
| MsG0380015394.01 | MsG0580029102.01 | 0.844324 | 8.111683e-59 | 1.304847e-55 |
| MsG0380015954.01 | MsG0580029102.01 | 0.813930 | 1.994444e-51 | 1.319901e-48 |
| MsG0380016027.01 | MsG0580029102.01 | 0.835812 | 1.349317e-56 | 1.668529e-53 |
| MsG0380017282.01 | MsG0580029102.01 | 0.802897 | 4.510994e-49 | 2.235743e-46 |
| MsG0380017361.01 | MsG0580029102.01 | 0.812915 | 3.333888e-51 | 2.146477e-48 |
| MsG0380017440.01 | MsG0580029102.01 | 0.800712 | 1.267389e-48 | 5.942165e-46 |
| MsG0380017605.01 | MsG0580029102.01 | 0.868776 | 5.079254e-66 | 1.860131e-62 |
| MsG0380017632.01 | MsG0580029102.01 | 0.867327 | 1.484750e-65 | 5.163805e-62 |
| MsG0480018228.01 | MsG0580029102.01 | 0.801415 | 9.102014e-49 | 4.344212e-46 |
| MsG0580028756.01 | MsG0580029102.01 | 0.805742 | 1.152496e-49 | 6.145516e-47 |
| MsG0580028923.01 | MsG0580029102.01 | 0.813941 | 1.983449e-51 | 1.313000e-48 |
| MsG0580028927.01 | MsG0580029102.01 | 0.800803 | 1.214091e-48 | 5.705666e-46 |
| MsG0580028955.01 | MsG0580029102.01 | 0.821590 | 3.724488e-53 | 3.042830e-50 |
| MsG0580029102.01 | MsG0580029123.01 | 0.889393 | 2.522147e-73 | 2.031113e-69 |
| MsG0580029102.01 | MsG0580029591.01 | 0.839411 | 1.610803e-57 | 2.222776e-54 |
| MsG0580029102.01 | MsG0680035350.01 | 0.857044 | 2.133749e-62 | 5.196702e-59 |
| MsG0580029102.01 | MsG0680035776.01 | 0.816680 | 4.880514e-52 | 3.481145e-49 |
| MsG0580029102.01 | MsG0780036534.01 | 0.840847 | 6.792996e-58 | 9.799983e-55 |
| MsG0580029102.01 | MsG0780037741.01 | 0.854138 | 1.502920e-61 | 3.324202e-58 |
| MsG0580029102.01 | MsG0780038402.01 | 0.848872 | 4.646987e-60 | 8.649303e-57 |
| MsG0580029102.01 | MsG0780038736.01 | 0.851639 | 7.785986e-61 | 1.586094e-57 |
| MsG0580029102.01 | MsG0780039861.01 | 0.855460 | 6.216929e-62 | 1.436475e-58 |
| MsG0580029102.01 | MsG0780040533.01 | 0.807159 | 5.790980e-50 | 3.202152e-47 |
| MsG0580029102.01 | MsG0780040620.01 | 0.831626 | 1.500836e-55 | 1.637782e-52 |
| MsG0580029102.01 | MsG0780040641.01 | 0.825368 | 4.869603e-54 | 4.429626e-51 |
| MsG0580029102.01 | MsG0780040899.01 | 0.827882 | 1.223970e-54 | 1.196974e-51 |
| MsG0580029102.01 | MsG0780041008.01 | 0.827328 | 1.662766e-54 | 1.600264e-51 |
| MsG0580029102.01 | MsG0780041132.01 | 0.808490 | 3.018218e-50 | 1.728127e-47 |
| MsG0580029102.01 | MsG0780041142.01 | 0.805995 | 1.019535e-49 | 5.471917e-47 |
| MsG0580029102.01 | MsG0780041143.01 | 0.827259 | 1.727028e-54 | 1.658707e-51 |
| MsG0580029102.01 | MsG0780041340.01 | 0.807505 | 4.892498e-50 | 2.729901e-47 |
| MsG0580029102.01 | MsG0780041359.01 | 0.835642 | 1.490213e-56 | 1.833388e-53 |
| MsG0580029102.01 | MsG0880041930.01 | 0.819255 | 1.278285e-52 | 9.786942e-50 |
| MsG0580029102.01 | MsG0880043752.01 | 0.834033 | 3.785919e-56 | 4.438556e-53 |
| MsG0580029102.01 | MsG0880044103.01 | 0.802384 | 5.755558e-49 | 2.815651e-46 |
| MsG0580029102.01 | MsG0880045439.01 | 0.802631 | 5.119528e-49 | 2.520154e-46 |
| MsG0580029102.01 | MsG0880045612.01 | 0.877442 | 6.263990e-69 | 3.150404e-65 |
| MsG0580029102.01 | MsG0880045647.01 | 0.834590 | 2.745628e-56 | 3.273193e-53 |
| MsG0580029102.01 | MsG0880046646.01 | 0.803768 | 2.977287e-49 | 1.508917e-46 |
| MsG0580029102.01 | MsG0880046904.01 | 0.836150 | 1.107532e-56 | 1.383753e-53 |
| MsG0580029102.01 | MsG0880046905.01 | 0.836815 | 7.498653e-57 | 9.558005e-54 |
| MsG0580029102.01 | MsG0880046993.01 | 0.831027 | 2.106590e-55 | 2.258238e-52 |
| MsG0580029102.01 | MsG0880047447.01 | 0.816629 | 5.010864e-52 | 3.569226e-49 |
| MsG0580029102.01 | MsG0880047649.01 | 0.867462 | 1.344860e-65 | 4.699639e-62 |
| MsG0280006540.01 | MsG0580029102.01 | 0.833172 | 6.211441e-56 | 7.096798e-53 |
| MsG0280006563.01 | MsG0580029102.01 | 0.837661 | 4.556752e-57 | 5.960551e-54 |
| MsG0280007092.01 | MsG0580029102.01 | 0.812759 | 3.606121e-51 | 2.312278e-48 |
| MsG0280007359.01 | MsG0580029102.01 | 0.803035 | 4.224540e-49 | 2.101037e-46 |
| MsG0280009866.01 | MsG0580029102.01 | 0.808246 | 3.404055e-50 | 1.936643e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029102.01.T01 | MTR_5g081410 | 96.701 | 576 | 17 | 1 | 1 | 574 | 1 | 576 | 0.0 | 1149 |
| MsG0580029102.01.T01 | MTR_3g069590 | 68.212 | 604 | 147 | 12 | 1 | 570 | 1 | 593 | 0.0 | 774 |
| MsG0580029102.01.T01 | MTR_7g065220 | 60.606 | 495 | 190 | 2 | 44 | 537 | 148 | 638 | 0.0 | 621 |
| MsG0580029102.01.T01 | MTR_3g069590 | 69.794 | 437 | 100 | 5 | 1 | 411 | 1 | 431 | 0.0 | 596 |
| MsG0580029102.01.T01 | MTR_4g019770 | 62.093 | 430 | 155 | 2 | 42 | 467 | 54 | 479 | 0.0 | 541 |
| MsG0580029102.01.T01 | MTR_4g075640 | 52.490 | 482 | 201 | 7 | 82 | 556 | 89 | 549 | 8.59e-161 | 471 |
| MsG0580029102.01.T01 | MTR_8g030850 | 56.000 | 375 | 144 | 4 | 82 | 443 | 99 | 465 | 1.00e-135 | 403 |
| MsG0580029102.01.T01 | MTR_7g077690 | 50.957 | 418 | 141 | 4 | 82 | 443 | 115 | 524 | 1.36e-126 | 382 |
| MsG0580029102.01.T01 | MTR_6g087700 | 48.974 | 390 | 171 | 6 | 82 | 462 | 98 | 468 | 9.54e-125 | 378 |
| MsG0580029102.01.T01 | MTR_2g101830 | 44.755 | 429 | 211 | 6 | 17 | 443 | 28 | 432 | 3.98e-121 | 368 |
| MsG0580029102.01.T01 | MTR_5g025960 | 45.856 | 362 | 186 | 2 | 82 | 443 | 120 | 471 | 1.62e-104 | 326 |
| MsG0580029102.01.T01 | MTR_4g013165 | 46.395 | 319 | 150 | 4 | 131 | 448 | 1 | 299 | 3.21e-98 | 304 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029102.01.T01 | AT5G05940 | 62.103 | 504 | 181 | 7 | 42 | 535 | 63 | 566 | 0.0 | 614 |
| MsG0580029102.01.T01 | AT5G02010 | 69.367 | 395 | 112 | 4 | 63 | 453 | 52 | 441 | 0.0 | 582 |
| MsG0580029102.01.T01 | AT3G55660 | 53.179 | 519 | 205 | 7 | 42 | 532 | 71 | 579 | 3.09e-175 | 508 |
| MsG0580029102.01.T01 | AT5G05940 | 65.416 | 373 | 126 | 2 | 42 | 411 | 63 | 435 | 2.24e-174 | 503 |
| MsG0580029102.01.T01 | AT4G38430 | 55.972 | 427 | 174 | 5 | 67 | 489 | 80 | 496 | 1.58e-160 | 469 |
| MsG0580029102.01.T01 | AT3G55660 | 59.517 | 373 | 142 | 3 | 42 | 411 | 71 | 437 | 3.03e-152 | 444 |
| MsG0580029102.01.T01 | AT4G00460 | 56.915 | 376 | 147 | 5 | 82 | 450 | 106 | 473 | 3.04e-140 | 415 |
| MsG0580029102.01.T01 | AT4G00460 | 56.915 | 376 | 147 | 5 | 82 | 450 | 106 | 473 | 3.04e-140 | 415 |
| MsG0580029102.01.T01 | AT1G01700 | 57.995 | 369 | 140 | 5 | 82 | 443 | 118 | 478 | 4.37e-139 | 412 |
| MsG0580029102.01.T01 | AT1G01700 | 53.634 | 399 | 140 | 6 | 82 | 443 | 118 | 508 | 1.50e-132 | 397 |
| MsG0580029102.01.T01 | AT3G24620 | 51.233 | 365 | 158 | 4 | 82 | 445 | 87 | 432 | 1.78e-129 | 389 |
| MsG0580029102.01.T01 | AT2G45890 | 51.187 | 379 | 164 | 6 | 82 | 450 | 95 | 462 | 2.06e-124 | 374 |
| MsG0580029102.01.T01 | AT4G13240 | 48.774 | 367 | 168 | 4 | 82 | 447 | 76 | 423 | 2.12e-123 | 373 |
| MsG0580029102.01.T01 | AT1G52240 | 50.815 | 368 | 158 | 5 | 82 | 448 | 106 | 451 | 8.96e-121 | 367 |
| MsG0580029102.01.T01 | AT1G79860 | 49.311 | 363 | 163 | 5 | 82 | 443 | 94 | 436 | 1.93e-120 | 366 |
| MsG0580029102.01.T01 | AT4G00460 | 53.666 | 341 | 143 | 5 | 117 | 450 | 8 | 340 | 2.70e-118 | 354 |
| MsG0580029102.01.T01 | AT1G01700 | 53.846 | 351 | 140 | 6 | 82 | 418 | 118 | 460 | 3.03e-116 | 353 |
| MsG0580029102.01.T01 | AT3G16130 | 48.533 | 375 | 175 | 5 | 75 | 448 | 85 | 442 | 1.56e-115 | 354 |
| MsG0580029102.01.T01 | AT5G19560 | 47.411 | 367 | 175 | 4 | 82 | 447 | 46 | 395 | 4.63e-114 | 348 |
| MsG0580029102.01.T01 | AT5G19560 | 47.411 | 367 | 175 | 4 | 82 | 447 | 46 | 395 | 4.63e-114 | 348 |
| MsG0580029102.01.T01 | AT5G19560 | 47.411 | 367 | 175 | 4 | 82 | 447 | 65 | 414 | 8.50e-114 | 348 |
| MsG0580029102.01.T01 | AT5G19560 | 45.921 | 331 | 161 | 4 | 82 | 411 | 65 | 378 | 2.42e-98 | 304 |
| MsG0580029102.01.T01 | AT1G31650 | 41.351 | 370 | 198 | 3 | 82 | 446 | 110 | 465 | 3.83e-95 | 301 |
| MsG0580029102.01.T01 | AT1G31650 | 41.351 | 370 | 198 | 3 | 82 | 446 | 138 | 493 | 2.27e-94 | 300 |
| MsG0580029102.01.T01 | AT4G00460 | 58.333 | 228 | 90 | 3 | 82 | 306 | 106 | 331 | 2.57e-80 | 256 |
| MsG0580029102.01.T01 | AT1G01700 | 60.748 | 214 | 81 | 2 | 82 | 292 | 118 | 331 | 1.32e-79 | 255 |
| MsG0580029102.01.T01 | AT1G01700 | 60.748 | 214 | 81 | 2 | 82 | 292 | 118 | 331 | 1.32e-79 | 255 |
| MsG0580029102.01.T01 | AT5G19560 | 44.604 | 278 | 136 | 4 | 171 | 447 | 5 | 265 | 5.59e-76 | 245 |
Find 113 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATGGCTGCTTTCAGTATT+TGG | 0.134248 | 5:+91984839 | None:intergenic |
| TAACATGGTTTCACAGAAAA+AGG | 0.190047 | 5:-91983821 | MsG0580029102.01.T01:CDS |
| TTCATCTGATTTGCTGCATT+TGG | 0.225466 | 5:+91986488 | None:intergenic |
| GGTCTTCTTCATTTCCTATT+AGG | 0.245693 | 5:-91986524 | MsG0580029102.01.T01:CDS |
| ACTCAACACAAAGCAAAATT+TGG | 0.247443 | 5:-91983766 | MsG0580029102.01.T01:CDS |
| TCTTGAGTAGCTTTCTAGTA+TGG | 0.255785 | 5:+91983948 | None:intergenic |
| CAACATGTAGGAACTGTATT+TGG | 0.265120 | 5:-91985956 | MsG0580029102.01.T01:intron |
| AAACCTCAACGTCGCGGTTT+TGG | 0.279389 | 5:-91983655 | MsG0580029102.01.T01:CDS |
| TTGTTGAGTTAATGCCTTCT+TGG | 0.293497 | 5:-91985844 | MsG0580029102.01.T01:CDS |
| TTGTTATTGTTGTGGATAAA+AGG | 0.311337 | 5:+91983688 | None:intergenic |
| GAACTGTATTTGGACAATTA+TGG | 0.318046 | 5:-91985946 | MsG0580029102.01.T01:CDS |
| GCAAGGGGAACACGGGGTAC+TGG | 0.319386 | 5:+91984916 | None:intergenic |
| GTTGCACTGCTATGGAGTTT+TGG | 0.323799 | 5:-91985029 | MsG0580029102.01.T01:CDS |
| CAGCATTGCTTTGGATGAAA+TGG | 0.326844 | 5:-91984809 | MsG0580029102.01.T01:CDS |
| AGAAAGCTACTCAAGAGTTT+TGG | 0.328969 | 5:-91983941 | MsG0580029102.01.T01:CDS |
| TGGAAATCTATCTGAATGTT+TGG | 0.339488 | 5:+91983858 | None:intergenic |
| GTTACATGTGTTGATGAGTT+TGG | 0.351946 | 5:+91986757 | None:intergenic |
| GACATAGTGCCCTTCCTAAT+AGG | 0.352007 | 5:+91986510 | None:intergenic |
| TTCATTGAAGCAGCGCTTCC+CGG | 0.357161 | 5:-91984277 | MsG0580029102.01.T01:CDS |
| TTATCATCAACTTGAGAAAC+AGG | 0.378270 | 5:+91986453 | None:intergenic |
| AGAAAAGTGGCAGAGAGAAA+TGG | 0.381993 | 5:-91985894 | MsG0580029102.01.T01:CDS |
| GGAAGTTCCAGAGTCCTATC+TGG | 0.382134 | 5:-91984788 | MsG0580029102.01.T01:CDS |
| GTCTATCAACAGCATTGCTT+TGG | 0.387793 | 5:-91984818 | MsG0580029102.01.T01:CDS |
| AGAGTGTTGTCAAATTATCT+TGG | 0.399409 | 5:-91983625 | MsG0580029102.01.T01:CDS |
| TTTGTTACTCAAAACACAAA+AGG | 0.406060 | 5:+91986682 | None:intergenic |
| CTCTAGTGCAACATGTTCAT+TGG | 0.407740 | 5:+91984473 | None:intergenic |
| CATCTGGTGCCACAATTCCT+TGG | 0.414903 | 5:+91984998 | None:intergenic |
| CTGATTTCTCTTGCGAAAAG+AGG | 0.416366 | 5:+91984963 | None:intergenic |
| GGACATTGTGAAGGACTTCA+TGG | 0.423504 | 5:-91984352 | MsG0580029102.01.T01:CDS |
| CATAAATTGCGGCTTCTAAA+CGG | 0.424426 | 5:+91984442 | None:intergenic |
| TCTTGAGTTCTCGCTGAGAC+TGG | 0.430135 | 5:+91984894 | None:intergenic |
| CCCTTTGAAGGACTAATTAG+TGG | 0.432878 | 5:+91983721 | None:intergenic |
| GTGAAGGACTTCATGGTTGA+TGG | 0.439958 | 5:-91984345 | MsG0580029102.01.T01:CDS |
| TAGAAGCCGCAATTTATGTA+TGG | 0.441628 | 5:-91984437 | MsG0580029102.01.T01:CDS |
| TTTAGATAGTTGCACTGCTA+TGG | 0.442885 | 5:-91985037 | MsG0580029102.01.T01:CDS |
| TCAGAATGGAAGAACGTGCT+TGG | 0.444622 | 5:-91984568 | MsG0580029102.01.T01:intron |
| CAAGGGGAACACGGGGTACT+GGG | 0.445741 | 5:+91984917 | None:intergenic |
| GGAGTTACCTCTCCCTTTGA+AGG | 0.445840 | 5:+91983709 | None:intergenic |
| TCAGGATATGTTTGCCAAGA+AGG | 0.453625 | 5:+91985830 | None:intergenic |
| AAAAGGAGTTAGCACTGCTT+TGG | 0.462316 | 5:-91986187 | MsG0580029102.01.T01:CDS |
| CAGAATGGAAGAACGTGCTT+GGG | 0.465023 | 5:-91984567 | MsG0580029102.01.T01:CDS |
| TGTGAAACCATGTTAACCAT+TGG | 0.466695 | 5:+91983829 | None:intergenic |
| GAGGCTGATCCATCTGCATC+TGG | 0.467719 | 5:+91984982 | None:intergenic |
| GCAAGCACTCTTGAGAGAAC+TGG | 0.473659 | 5:+91984514 | None:intergenic |
| TCATTGAAGCAGCGCTTCCC+GGG | 0.475313 | 5:-91984276 | MsG0580029102.01.T01:CDS |
| CTGCTTGGTGAAGATATGTC+AGG | 0.475560 | 5:-91986216 | MsG0580029102.01.T01:CDS |
| ATCAGGAGGGGATATGATGA+AGG | 0.476878 | 5:-91986256 | MsG0580029102.01.T01:intron |
| AGCATGAAACCTTGTTGCAT+TGG | 0.478930 | 5:+91984220 | None:intergenic |
| CTTGGGAAGGGTATCCAGAT+AGG | 0.479390 | 5:+91984774 | None:intergenic |
| ACCTCTTGCTTACTACCATC+AGG | 0.479748 | 5:+91985812 | None:intergenic |
| TAGATTTCCATTGGCTCCAA+TGG | 0.482149 | 5:-91983845 | MsG0580029102.01.T01:CDS |
| TTCTTCATTTCCTATTAGGA+AGG | 0.485913 | 5:-91986520 | MsG0580029102.01.T01:CDS |
| AATGGGTCTTGTAGTTCCAC+TGG | 0.490578 | 5:-91986591 | MsG0580029102.01.T01:CDS |
| GGTGAAGATATGTCAGGGTC+TGG | 0.491025 | 5:-91986210 | MsG0580029102.01.T01:CDS |
| TTGTTACTCAAAACACAAAA+GGG | 0.498312 | 5:+91986683 | None:intergenic |
| TTGTCGAGTTTACGTAGAGC+TGG | 0.504038 | 5:+91985165 | None:intergenic |
| TGATATTGTTGTTATTGTTG+TGG | 0.506831 | 5:+91983680 | None:intergenic |
| GAGACTGGCAAGGGGAACAC+GGG | 0.508238 | 5:+91984909 | None:intergenic |
| ACATTCAGATAGATTTCCAT+TGG | 0.512184 | 5:-91983854 | MsG0580029102.01.T01:CDS |
| GAAGTCCTTCACAATGTCCC+AGG | 0.512615 | 5:+91984356 | None:intergenic |
| GATATGTCAGGGTCTGGAAA+AGG | 0.513629 | 5:-91986204 | MsG0580029102.01.T01:CDS |
| TGAGACTGGCAAGGGGAACA+CGG | 0.513735 | 5:+91984908 | None:intergenic |
| TGGAAAATCAAACCTTGGGA+AGG | 0.522872 | 5:+91984761 | None:intergenic |
| ATGTAGTTTGACTTAAACCC+GGG | 0.524605 | 5:+91984259 | None:intergenic |
| ACACCAAAACCGCGACGTTG+AGG | 0.531446 | 5:+91983652 | None:intergenic |
| GTATATTGACCAAGGAATTG+TGG | 0.532957 | 5:-91985007 | MsG0580029102.01.T01:CDS |
| ATCAGCGGCAAGAGGAGAAG+TGG | 0.535708 | 5:-91984945 | MsG0580029102.01.T01:CDS |
| ATGTTAACCATTGGAGCCAA+TGG | 0.540862 | 5:+91983838 | None:intergenic |
| GCCACTAATTAGTCCTTCAA+AGG | 0.542594 | 5:-91983722 | MsG0580029102.01.T01:CDS |
| GTGTTGTCAAATTATCTTGG+AGG | 0.544230 | 5:-91983622 | MsG0580029102.01.T01:CDS |
| ATGGATTGGCTTCTTTGTGT+TGG | 0.553290 | 5:-91985875 | MsG0580029102.01.T01:CDS |
| TCTTCATTTCCTATTAGGAA+GGG | 0.555428 | 5:-91986519 | MsG0580029102.01.T01:CDS |
| ACTTTGTAGTCGAACGGCTA+GGG | 0.555981 | 5:+91984382 | None:intergenic |
| CCACTAATTAGTCCTTCAAA+GGG | 0.557284 | 5:-91983721 | MsG0580029102.01.T01:CDS |
| AATTAGTCCTTCAAAGGGAG+AGG | 0.557362 | 5:-91983716 | MsG0580029102.01.T01:CDS |
| AGTTCTCGCTGAGACTGGCA+AGG | 0.560263 | 5:+91984899 | None:intergenic |
| AATTGCGGCTTCTAAACGGT+TGG | 0.562150 | 5:+91984446 | None:intergenic |
| GTGGTTTAGAGTGAGATCTC+TGG | 0.563305 | 5:+91984412 | None:intergenic |
| GACTTTGTAGTCGAACGGCT+AGG | 0.565228 | 5:+91984381 | None:intergenic |
| GGAAAATCAAACCTTGGGAA+GGG | 0.565938 | 5:+91984762 | None:intergenic |
| ATTGGCTCCAATGGTTAACA+TGG | 0.571176 | 5:-91983836 | MsG0580029102.01.T01:CDS |
| AGTGGCAGAGAGAAATGGAT+TGG | 0.572062 | 5:-91985889 | MsG0580029102.01.T01:CDS |
| GGGTTTAAGTCAAACTACAT+TGG | 0.572158 | 5:-91984256 | MsG0580029102.01.T01:CDS |
| GAAGGACTAATTAGTGGCAC+AGG | 0.574721 | 5:+91983727 | None:intergenic |
| GTCGAACGGCTAGGGTAAAG+TGG | 0.578967 | 5:+91984390 | None:intergenic |
| AGGTTTGCGAAGTTACTGCT+TGG | 0.585242 | 5:-91986231 | MsG0580029102.01.T01:CDS |
| TTCGACTACAAAGTCACCCT+GGG | 0.587847 | 5:-91984373 | MsG0580029102.01.T01:CDS |
| CTATCTGGATACCCTTCCCA+AGG | 0.591679 | 5:-91984773 | MsG0580029102.01.T01:intron |
| CAAGAGAAATCAGCGGCAAG+AGG | 0.598859 | 5:-91984953 | MsG0580029102.01.T01:CDS |
| GTTCGACTACAAAGTCACCC+TGG | 0.599211 | 5:-91984374 | MsG0580029102.01.T01:CDS |
| CATGTGAAAAGAAAGAAAAG+TGG | 0.603913 | 5:-91985907 | MsG0580029102.01.T01:CDS |
| AGGGTATCCAGATAGGACTC+TGG | 0.605877 | 5:+91984781 | None:intergenic |
| GAGGGGATATGATGAAGGAA+AGG | 0.608465 | 5:-91986251 | MsG0580029102.01.T01:CDS |
| AATGTAGTTTGACTTAAACC+CGG | 0.610470 | 5:+91984258 | None:intergenic |
| TGCTTGGTGAAGATATGTCA+GGG | 0.618748 | 5:-91986215 | MsG0580029102.01.T01:CDS |
| TCCTGATGGTAGTAAGCAAG+AGG | 0.623727 | 5:-91985813 | MsG0580029102.01.T01:intron |
| GTTCTCGCTGAGACTGGCAA+GGG | 0.626034 | 5:+91984900 | None:intergenic |
| AGGGTGACTTTGTAGTCGAA+CGG | 0.627346 | 5:+91984376 | None:intergenic |
| CTGGCGCCATACATAAATTG+CGG | 0.627878 | 5:+91984431 | None:intergenic |
| TCTTGGCAAACATATCCTGA+TGG | 0.629177 | 5:-91985827 | MsG0580029102.01.T01:CDS |
| GTCACCCTGGGACATTGTGA+AGG | 0.632420 | 5:-91984361 | MsG0580029102.01.T01:CDS |
| TTCTCGCTGAGACTGGCAAG+GGG | 0.636812 | 5:+91984901 | None:intergenic |
| ATCTGAGCAACACGATCCAG+TGG | 0.638385 | 5:+91986575 | None:intergenic |
| ATCATTAAACCTCAACGTCG+CGG | 0.638867 | 5:-91983661 | MsG0580029102.01.T01:CDS |
| ATTGTGGCACCAGATGCAGA+TGG | 0.645033 | 5:-91984991 | MsG0580029102.01.T01:CDS |
| AGCGGCAAGAGGAGAAGTGG+TGG | 0.645482 | 5:-91984942 | MsG0580029102.01.T01:CDS |
| AAGTCCTTCACAATGTCCCA+GGG | 0.648270 | 5:+91984357 | None:intergenic |
| AGCAATGCTGTTGATAGACA+TGG | 0.660827 | 5:+91984822 | None:intergenic |
| TAGCAAGATCCAATGCAACA+AGG | 0.662550 | 5:-91984229 | MsG0580029102.01.T01:intron |
| AGACTGGCAAGGGGAACACG+GGG | 0.665916 | 5:+91984910 | None:intergenic |
| GCACTCTTGAGAGAACTGGT+CGG | 0.681945 | 5:+91984518 | None:intergenic |
| GAACGGCTAGGGTAAAGTGG+TGG | 0.692029 | 5:+91984393 | None:intergenic |
| AATGCTATTACTAATCTGTG+TGG | 0.708645 | 5:-91986156 | MsG0580029102.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAATAAAGATTAATAAAT+AGG | - | Chr5:91984435-91984454 | MsG0580029102.01.T01:CDS | 10.0% |
| !!! | ATTTTTTTTTTTGGTAAAAA+TGG | - | Chr5:91983529-91983548 | MsG0580029102.01.T01:CDS | 10.0% |
| !!! | AATTTTCAAAAGAGAAAAAA+TGG | - | Chr5:91983575-91983594 | MsG0580029102.01.T01:CDS | 15.0% |
| !!! | ACAAAGTCAATTTTTTTTTT+TGG | - | Chr5:91983520-91983539 | MsG0580029102.01.T01:CDS | 15.0% |
| !!! | ATTTTCAAAAGAGAAAAAAT+GGG | - | Chr5:91983576-91983595 | MsG0580029102.01.T01:CDS | 15.0% |
| !! | AAGATCTCAATAGATTTATT+TGG | + | Chr5:91985446-91985465 | None:intergenic | 20.0% |
| !! | ATTGTTGATACTATATAATC+CGG | - | Chr5:91985514-91985533 | MsG0580029102.01.T01:intron | 20.0% |
| !! | GTACATTAAATTCACATATA+CGG | + | Chr5:91984645-91984664 | None:intergenic | 20.0% |
| !! | TACAAAGTCATAACATAATA+AGG | + | Chr5:91983906-91983925 | None:intergenic | 20.0% |
| !! | TTAATTACCCTACTAAATAA+AGG | + | Chr5:91984923-91984942 | None:intergenic | 20.0% |
| !! | TTATTATGTTATGACTTTGT+AGG | - | Chr5:91983905-91983924 | MsG0580029102.01.T01:CDS | 20.0% |
| !!! | AGAAAATGTTAACTTTTTCT+TGG | - | Chr5:91984100-91984119 | MsG0580029102.01.T01:intron | 20.0% |
| !!! | TGTTTCATTTTAAACATTTC+AGG | - | Chr5:91986201-91986220 | MsG0580029102.01.T01:CDS | 20.0% |
| !!! | TTCTTACAATTTGTTCAATT+GGG | - | Chr5:91984197-91984216 | MsG0580029102.01.T01:intron | 20.0% |
| !!! | TTTCTTACAATTTGTTCAAT+TGG | - | Chr5:91984196-91984215 | MsG0580029102.01.T01:intron | 20.0% |
| !!! | TTTTTTTTTGGTAAAAATGG+AGG | - | Chr5:91983532-91983551 | MsG0580029102.01.T01:CDS | 20.0% |
| ! | AAAGTTCAAACAATGTATCA+TGG | + | Chr5:91985597-91985616 | None:intergenic | 25.0% |
| ! | AAATAAGCTGAAATGGTTTA+TGG | + | Chr5:91986087-91986106 | None:intergenic | 25.0% |
| ! | AAGTTCAAACAATGTATCAT+GGG | + | Chr5:91985596-91985615 | None:intergenic | 25.0% |
| ! | AATTATTGATCAAAATCCGA+TGG | - | Chr5:91984580-91984599 | MsG0580029102.01.T01:intron | 25.0% |
| ! | ATGATTCAAATGTTGTGTTA+TGG | - | Chr5:91984130-91984149 | MsG0580029102.01.T01:intron | 25.0% |
| ! | ATGTTAATGTGAAGTTGTTA+GGG | + | Chr5:91986182-91986201 | None:intergenic | 25.0% |
| ! | CTTATGAAAATAAGCTGAAA+TGG | + | Chr5:91986094-91986113 | None:intergenic | 25.0% |
| ! | GTAGTTTGATTGAAATAGAA+CGG | - | Chr5:91984750-91984769 | MsG0580029102.01.T01:intron | 25.0% |
| ! | TAATGTATCATGTCTAATAC+CGG | + | Chr5:91985536-91985555 | None:intergenic | 25.0% |
| ! | TATTTGGAAAATCAAACCTT+GGG | + | Chr5:91985430-91985449 | None:intergenic | 25.0% |
| ! | TTATGTTCTGTTTAGTGTTT+AGG | - | Chr5:91983809-91983828 | MsG0580029102.01.T01:CDS | 25.0% |
| ! | TTATTTGGAAAATCAAACCT+TGG | + | Chr5:91985431-91985450 | None:intergenic | 25.0% |
| ! | TTGATAAAAATGTCTGATCT+TGG | + | Chr5:91984995-91985014 | None:intergenic | 25.0% |
| ! | TTGTTACTCAAAACACAAAA+GGG | + | Chr5:91983504-91983523 | None:intergenic | 25.0% |
| ! | TTTGTTACTCAAAACACAAA+AGG | + | Chr5:91983505-91983524 | None:intergenic | 25.0% |
| !! | GTATTTTATTCTTCCAATGT+AGG | - | Chr5:91985061-91985080 | MsG0580029102.01.T01:intron | 25.0% |
| !! | TACACTTTTCTCTTTGTAAA+AGG | - | Chr5:91985120-91985139 | MsG0580029102.01.T01:intron | 25.0% |
| !! | TGATATTGTTGTTATTGTTG+TGG | + | Chr5:91986507-91986526 | None:intergenic | 25.0% |
| !! | TTGTAACACATATTGATAGT+AGG | - | Chr5:91984062-91984081 | MsG0580029102.01.T01:intron | 25.0% |
| !! | TTGTTATTGTTGTGGATAAA+AGG | + | Chr5:91986499-91986518 | None:intergenic | 25.0% |
| !! | TTTTAAACATTTCAGGATGT+TGG | - | Chr5:91986208-91986227 | MsG0580029102.01.T01:CDS | 25.0% |
| !!! | AATGTTAACTTTTTCTTGGA+TGG | - | Chr5:91984104-91984123 | MsG0580029102.01.T01:intron | 25.0% |
| !!! | CAAATTTCGAGTTTTCAATT+TGG | + | Chr5:91984807-91984826 | None:intergenic | 25.0% |
| AACAAGCAAAAAATGCAAGA+GGG | - | Chr5:91983639-91983658 | MsG0580029102.01.T01:CDS | 30.0% | |
| AACCATAACCATTGTTAAGA+CGG | + | Chr5:91984162-91984181 | None:intergenic | 30.0% | |
| AATCATACAAAGTAGAGAGT+AGG | + | Chr5:91984462-91984481 | None:intergenic | 30.0% | |
| AATCATACTAAGTAGAGAGT+AGG | + | Chr5:91984694-91984713 | None:intergenic | 30.0% | |
| AATGCTATTACTAATCTGTG+TGG | - | Chr5:91984028-91984047 | MsG0580029102.01.T01:intron | 30.0% | |
| ACACTAAACAGAACATAACA+AGG | + | Chr5:91983807-91983826 | None:intergenic | 30.0% | |
| ACATTCAGATAGATTTCCAT+TGG | - | Chr5:91986330-91986349 | MsG0580029102.01.T01:intron | 30.0% | |
| ACTCAACACAAAGCAAAATT+TGG | - | Chr5:91986418-91986437 | MsG0580029102.01.T01:intron | 30.0% | |
| ACTCTCTACTTAGTATGATT+AGG | - | Chr5:91984694-91984713 | MsG0580029102.01.T01:intron | 30.0% | |
| ACTCTCTACTTTGTATGATT+AGG | - | Chr5:91984462-91984481 | MsG0580029102.01.T01:CDS | 30.0% | |
| AGTAGTAGTAGTACTAGTAA+GGG | + | Chr5:91984860-91984879 | None:intergenic | 30.0% | |
| AGTATCAGCTCAAAAATTTC+TGG | - | Chr5:91983764-91983783 | MsG0580029102.01.T01:CDS | 30.0% | |
| ATCATACAAAGTAGAGAGTA+GGG | + | Chr5:91984461-91984480 | None:intergenic | 30.0% | |
| ATCATACTAAGTAGAGAGTA+GGG | + | Chr5:91984693-91984712 | None:intergenic | 30.0% | |
| ATTACCCTACTAAATAAAGG+TGG | + | Chr5:91984920-91984939 | None:intergenic | 30.0% | |
| ATTGTATCATCAACAGATCT+TGG | - | Chr5:91986032-91986051 | MsG0580029102.01.T01:intron | 30.0% | |
| CATGTGAAAAGAAAGAAAAG+TGG | - | Chr5:91984277-91984296 | MsG0580029102.01.T01:CDS | 30.0% | |
| CATGTTAATGTGAAGTTGTT+AGG | + | Chr5:91986183-91986202 | None:intergenic | 30.0% | |
| CATTGTTTGAACTTTCAGAA+TGG | - | Chr5:91985602-91985621 | MsG0580029102.01.T01:intron | 30.0% | |
| CTCTCTACTTAGTATGATTA+GGG | - | Chr5:91984695-91984714 | MsG0580029102.01.T01:intron | 30.0% | |
| CTCTCTACTTTGTATGATTA+GGG | - | Chr5:91984463-91984482 | MsG0580029102.01.T01:CDS | 30.0% | |
| GAACTGTATTTGGACAATTA+TGG | - | Chr5:91984238-91984257 | MsG0580029102.01.T01:CDS | 30.0% | |
| GTACATCAAATTCACGTATA+AGG | + | Chr5:91984413-91984432 | None:intergenic | 30.0% | |
| GTCGTTTGATTGAAATAGAA+CGG | - | Chr5:91984518-91984537 | MsG0580029102.01.T01:CDS | 30.0% | |
| TAACATGGTTTCACAGAAAA+AGG | - | Chr5:91986363-91986382 | MsG0580029102.01.T01:intron | 30.0% | |
| TAGTAGTAGTAGTACTAGTA+AGG | + | Chr5:91984861-91984880 | None:intergenic | 30.0% | |
| TATTACTAATCTGTGTGGTA+TGG | - | Chr5:91984033-91984052 | MsG0580029102.01.T01:intron | 30.0% | |
| TCTTCATTTCCTATTAGGAA+GGG | - | Chr5:91983665-91983684 | MsG0580029102.01.T01:CDS | 30.0% | |
| TGGAAATCTATCTGAATGTT+TGG | + | Chr5:91986329-91986348 | None:intergenic | 30.0% | |
| TTATCATCAACTTGAGAAAC+AGG | + | Chr5:91983734-91983753 | None:intergenic | 30.0% | |
| TTCTTCATTTCCTATTAGGA+AGG | - | Chr5:91983664-91983683 | MsG0580029102.01.T01:CDS | 30.0% | |
| ! | AATGTAGTTTGACTTAAACC+CGG | + | Chr5:91985929-91985948 | None:intergenic | 30.0% |
| ! | CACTTTTCTTTCTTTTCACA+TGG | + | Chr5:91984279-91984298 | None:intergenic | 30.0% |
| !! | AGAAATTTTTGAGCTGATAC+TGG | + | Chr5:91983765-91983784 | None:intergenic | 30.0% |
| !! | AGAGTGTTGTCAAATTATCT+TGG | - | Chr5:91986559-91986578 | MsG0580029102.01.T01:CDS | 30.0% |
| !! | TCATTTTGTCTTGCTTTTCA+TGG | + | Chr5:91986695-91986714 | None:intergenic | 30.0% |
| AACGGTCGATATTTCATGTT+TGG | - | Chr5:91984536-91984555 | MsG0580029102.01.T01:CDS | 35.0% | |
| ATAAAGAGAAGCTTATGCAC+GGG | + | Chr5:91986129-91986148 | None:intergenic | 35.0% | |
| CAAATGTTGTGTTATGGTCA+GGG | - | Chr5:91984136-91984155 | MsG0580029102.01.T01:intron | 35.0% | |
| CAACATGTAGGAACTGTATT+TGG | - | Chr5:91984228-91984247 | MsG0580029102.01.T01:intron | 35.0% | |
| CATAAAGAGAAGCTTATGCA+CGG | + | Chr5:91986130-91986149 | None:intergenic | 35.0% | |
| CATAAATTGCGGCTTCTAAA+CGG | + | Chr5:91985745-91985764 | None:intergenic | 35.0% | |
| CCACTAATTAGTCCTTCAAA+GGG | - | Chr5:91986463-91986482 | MsG0580029102.01.T01:CDS | 35.0% | |
| GAACAAGCAAAAAATGCAAG+AGG | - | Chr5:91983638-91983657 | MsG0580029102.01.T01:CDS | 35.0% | |
| GGGTTTAAGTCAAACTACAT+TGG | - | Chr5:91985928-91985947 | MsG0580029102.01.T01:CDS | 35.0% | |
| GGTCTTCTTCATTTCCTATT+AGG | - | Chr5:91983660-91983679 | MsG0580029102.01.T01:CDS | 35.0% | |
| GTATATTGACCAAGGAATTG+TGG | - | Chr5:91985177-91985196 | MsG0580029102.01.T01:CDS | 35.0% | |
| GTGTTGTCAAATTATCTTGG+AGG | - | Chr5:91986562-91986581 | MsG0580029102.01.T01:CDS | 35.0% | |
| TACACAATTGCAGCAAAGTA+TGG | + | Chr5:91983845-91983864 | None:intergenic | 35.0% | |
| TAGAAGCCGCAATTTATGTA+TGG | - | Chr5:91985747-91985766 | MsG0580029102.01.T01:intron | 35.0% | |
| TCAAATGTTGTGTTATGGTC+AGG | - | Chr5:91984135-91984154 | MsG0580029102.01.T01:intron | 35.0% | |
| TGATACATTACAGAACGCTA+TGG | - | Chr5:91985546-91985565 | MsG0580029102.01.T01:intron | 35.0% | |
| TGTGAAACCATGTTAACCAT+TGG | + | Chr5:91986358-91986377 | None:intergenic | 35.0% | |
| TGTTATGACTTTGTAGGATC+AGG | - | Chr5:91983911-91983930 | MsG0580029102.01.T01:CDS | 35.0% | |
| TTGTTGAGTTAATGCCTTCT+TGG | - | Chr5:91984340-91984359 | MsG0580029102.01.T01:CDS | 35.0% | |
| TTTAGATAGTTGCACTGCTA+TGG | - | Chr5:91985147-91985166 | MsG0580029102.01.T01:intron | 35.0% | |
| ! | ACCACCACCTTTATTTAGTA+GGG | - | Chr5:91984913-91984932 | MsG0580029102.01.T01:CDS | 35.0% |
| ! | AGAAAGCTACTCAAGAGTTT+TGG | - | Chr5:91986243-91986262 | MsG0580029102.01.T01:CDS | 35.0% |
| ! | AGTTACATGTGTTGATGAGT+TGG | + | Chr5:91983431-91983450 | None:intergenic | 35.0% |
| ! | ATGTAGTTTGACTTAAACCC+GGG | + | Chr5:91985928-91985947 | None:intergenic | 35.0% |
| ! | TACCACCACCTTTATTTAGT+AGG | - | Chr5:91984912-91984931 | MsG0580029102.01.T01:CDS | 35.0% |
| ! | TCTTGAGTAGCTTTCTAGTA+TGG | + | Chr5:91986239-91986258 | None:intergenic | 35.0% |
| ! | TGTTCTGTTCTTTTGCAACT+TGG | + | Chr5:91986646-91986665 | None:intergenic | 35.0% |
| !! | GAGTTTTGGTATATTGACCA+AGG | - | Chr5:91985169-91985188 | MsG0580029102.01.T01:CDS | 35.0% |
| !! | TTCATCTGATTTGCTGCATT+TGG | + | Chr5:91983699-91983718 | None:intergenic | 35.0% |
| AAAAGGAGTTAGCACTGCTT+TGG | - | Chr5:91983997-91984016 | MsG0580029102.01.T01:intron | 40.0% | |
| AATTAGTCCTTCAAAGGGAG+AGG | - | Chr5:91986468-91986487 | MsG0580029102.01.T01:CDS | 40.0% | |
| ACCCTACTAAATAAAGGTGG+TGG | + | Chr5:91984917-91984936 | None:intergenic | 40.0% | |
| AGAAAAGTGGCAGAGAGAAA+TGG | - | Chr5:91984290-91984309 | MsG0580029102.01.T01:CDS | 40.0% | |
| AGCATGAAACCTTGTTGCAT+TGG | + | Chr5:91985967-91985986 | None:intergenic | 40.0% | |
| ATCATTAAACCTCAACGTCG+CGG | - | Chr5:91986523-91986542 | MsG0580029102.01.T01:CDS | 40.0% | |
| ATGACTTTGTAGGATCAGGA+GGG | - | Chr5:91983915-91983934 | MsG0580029102.01.T01:CDS | 40.0% | |
| ATGTTAACCATTGGAGCCAA+TGG | + | Chr5:91986349-91986368 | None:intergenic | 40.0% | |
| CTCTAGTGCAACATGTTCAT+TGG | + | Chr5:91985714-91985733 | None:intergenic | 40.0% | |
| CTGATTTCTCTTGCGAAAAG+AGG | + | Chr5:91985224-91985243 | None:intergenic | 40.0% | |
| CTTACTACCATCTGAACCAT+CGG | + | Chr5:91984599-91984618 | None:intergenic | 40.0% | |
| GCCACTAATTAGTCCTTCAA+AGG | - | Chr5:91986462-91986481 | MsG0580029102.01.T01:CDS | 40.0% | |
| GGAAAATCAAACCTTGGGAA+GGG | + | Chr5:91985425-91985444 | None:intergenic | 40.0% | |
| GTCTATCAACAGCATTGCTT+TGG | - | Chr5:91985366-91985385 | MsG0580029102.01.T01:intron | 40.0% | |
| TAAAGAGAAGCTTATGCACG+GGG | + | Chr5:91986128-91986147 | None:intergenic | 40.0% | |
| TAGCAAGATCCAATGCAACA+AGG | - | Chr5:91985955-91985974 | MsG0580029102.01.T01:intron | 40.0% | |
| TATGACTTTGTAGGATCAGG+AGG | - | Chr5:91983914-91983933 | MsG0580029102.01.T01:CDS | 40.0% | |
| TCAAAATCCGATGGTTCAGA+TGG | - | Chr5:91984589-91984608 | MsG0580029102.01.T01:intron | 40.0% | |
| TCAGGATATGTTTGCCAAGA+AGG | + | Chr5:91984357-91984376 | None:intergenic | 40.0% | |
| TCTAACATGTTCTGTTCTGC+AGG | - | Chr5:91984955-91984974 | MsG0580029102.01.T01:CDS | 40.0% | |
| TCTTGGCAAACATATCCTGA+TGG | - | Chr5:91984357-91984376 | MsG0580029102.01.T01:CDS | 40.0% | |
| TGGAAAATCAAACCTTGGGA+AGG | + | Chr5:91985426-91985445 | None:intergenic | 40.0% | |
| TTCAGATGGTAGTAAGCTAG+CGG | - | Chr5:91984603-91984622 | MsG0580029102.01.T01:intron | 40.0% | |
| ! | ACATGGCTGCTTTCAGTATT+TGG | + | Chr5:91985348-91985367 | None:intergenic | 40.0% |
| ! | AGCAATGCTGTTGATAGACA+TGG | + | Chr5:91985365-91985384 | None:intergenic | 40.0% |
| ! | ATTGGCTCCAATGGTTAACA+TGG | - | Chr5:91986348-91986367 | MsG0580029102.01.T01:intron | 40.0% |
| ! | CAGCATTGCTTTGGATGAAA+TGG | - | Chr5:91985375-91985394 | MsG0580029102.01.T01:intron | 40.0% |
| ! | CCCTTTGAAGGACTAATTAG+TGG | + | Chr5:91986466-91986485 | None:intergenic | 40.0% |
| ! | CTTTTCGCAAGAGAAATCAG+CGG | - | Chr5:91985224-91985243 | MsG0580029102.01.T01:intron | 40.0% |
| ! | TCTTTCTTTTCACATGGCAC+AGG | + | Chr5:91984273-91984292 | None:intergenic | 40.0% |
| ! | TGCTTGGTGAAGATATGTCA+GGG | - | Chr5:91983969-91983988 | MsG0580029102.01.T01:intron | 40.0% |
| ! | TTCCAATGTAGGCTAGTTCT+CGG | - | Chr5:91985072-91985091 | MsG0580029102.01.T01:intron | 40.0% |
| !! | ATGGATTGGCTTCTTTGTGT+TGG | - | Chr5:91984309-91984328 | MsG0580029102.01.T01:CDS | 40.0% |
| !! | TAGATTTCCATTGGCTCCAA+TGG | - | Chr5:91986339-91986358 | MsG0580029102.01.T01:intron | 40.0% |
| !! | TGGGATTTGTTGCAACATGT+AGG | - | Chr5:91984216-91984235 | MsG0580029102.01.T01:intron | 40.0% |
| AAGTCCTTCACAATGTCCCA+GGG | + | Chr5:91985830-91985849 | None:intergenic | 45.0% | |
| AATTGCGGCTTCTAAACGGT+TGG | + | Chr5:91985741-91985760 | None:intergenic | 45.0% | |
| ACCTCTTGCTTACTACCATC+AGG | + | Chr5:91984375-91984394 | None:intergenic | 45.0% | |
| ACTTTGTAGTCGAACGGCTA+GGG | + | Chr5:91985805-91985824 | None:intergenic | 45.0% | |
| AGGGTGACTTTGTAGTCGAA+CGG | + | Chr5:91985811-91985830 | None:intergenic | 45.0% | |
| AGGTTTGCGAAGTTACTGCT+TGG | - | Chr5:91983953-91983972 | MsG0580029102.01.T01:CDS | 45.0% | |
| AGTGGCAGAGAGAAATGGAT+TGG | - | Chr5:91984295-91984314 | MsG0580029102.01.T01:CDS | 45.0% | |
| ATCAGGAGGGGATATGATGA+AGG | - | Chr5:91983928-91983947 | MsG0580029102.01.T01:CDS | 45.0% | |
| CAGAATGGAAGAACGTGCTT+GGG | - | Chr5:91985617-91985636 | MsG0580029102.01.T01:intron | 45.0% | |
| CTGGCGCCATACATAAATTG+CGG | + | Chr5:91985756-91985775 | None:intergenic | 45.0% | |
| GAAGGACTAATTAGTGGCAC+AGG | + | Chr5:91986460-91986479 | None:intergenic | 45.0% | |
| GACATAGTGCCCTTCCTAAT+AGG | + | Chr5:91983677-91983696 | None:intergenic | 45.0% | |
| GAGGGGATATGATGAAGGAA+AGG | - | Chr5:91983933-91983952 | MsG0580029102.01.T01:CDS | 45.0% | |
| GATATGTCAGGGTCTGGAAA+AGG | - | Chr5:91983980-91983999 | MsG0580029102.01.T01:intron | 45.0% | |
| GGACATTGTGAAGGACTTCA+TGG | - | Chr5:91985832-91985851 | MsG0580029102.01.T01:CDS | 45.0% | |
| GGCCGTCTTAACAATGGTTA+TGG | - | Chr5:91984157-91984176 | MsG0580029102.01.T01:intron | 45.0% | |
| GTGAAGGACTTCATGGTTGA+TGG | - | Chr5:91985839-91985858 | MsG0580029102.01.T01:CDS | 45.0% | |
| TCAGAATGGAAGAACGTGCT+TGG | - | Chr5:91985616-91985635 | MsG0580029102.01.T01:intron | 45.0% | |
| TCCTGATGGTAGTAAGCAAG+AGG | - | Chr5:91984371-91984390 | MsG0580029102.01.T01:CDS | 45.0% | |
| TGACTTTGTAGGATCAGGAG+GGG | - | Chr5:91983916-91983935 | MsG0580029102.01.T01:CDS | 45.0% | |
| TTCGACTACAAAGTCACCCT+GGG | - | Chr5:91985811-91985830 | MsG0580029102.01.T01:intron | 45.0% | |
| TTGTCGAGTTTACGTAGAGC+TGG | + | Chr5:91985022-91985041 | None:intergenic | 45.0% | |
| ! | AATGGGTCTTGTAGTTCCAC+TGG | - | Chr5:91983593-91983612 | MsG0580029102.01.T01:CDS | 45.0% |
| ! | CTGCTTGGTGAAGATATGTC+AGG | - | Chr5:91983968-91983987 | MsG0580029102.01.T01:intron | 45.0% |
| ! | GTGGTTTAGAGTGAGATCTC+TGG | + | Chr5:91985775-91985794 | None:intergenic | 45.0% |
| ! | GTTGCACTGCTATGGAGTTT+TGG | - | Chr5:91985155-91985174 | MsG0580029102.01.T01:CDS | 45.0% |
| ! | TACCGAGAACTAGCCTACAT+TGG | + | Chr5:91985077-91985096 | None:intergenic | 45.0% |
| !!! | CTCAAGAGTTTTGGAGAGCA+TGG | - | Chr5:91986252-91986271 | MsG0580029102.01.T01:CDS | 45.0% |
| ATCTGAGCAACACGATCCAG+TGG | + | Chr5:91983612-91983631 | None:intergenic | 50.0% | |
| ATTGTGGCACCAGATGCAGA+TGG | - | Chr5:91985193-91985212 | MsG0580029102.01.T01:CDS | 50.0% | |
| CAAGAGAAATCAGCGGCAAG+AGG | - | Chr5:91985231-91985250 | MsG0580029102.01.T01:intron | 50.0% | |
| CTATCTGGATACCCTTCCCA+AGG | - | Chr5:91985411-91985430 | MsG0580029102.01.T01:intron | 50.0% | |
| GAAGTCCTTCACAATGTCCC+AGG | + | Chr5:91985831-91985850 | None:intergenic | 50.0% | |
| GACTTTGTAGTCGAACGGCT+AGG | + | Chr5:91985806-91985825 | None:intergenic | 50.0% | |
| GCAAGCACTCTTGAGAGAAC+TGG | + | Chr5:91985673-91985692 | None:intergenic | 50.0% | |
| GCACTCTTGAGAGAACTGGT+CGG | + | Chr5:91985669-91985688 | None:intergenic | 50.0% | |
| GGAAGTTCCAGAGTCCTATC+TGG | - | Chr5:91985396-91985415 | MsG0580029102.01.T01:intron | 50.0% | |
| GGAGTTACCTCTCCCTTTGA+AGG | + | Chr5:91986478-91986497 | None:intergenic | 50.0% | |
| GGTGAAGATATGTCAGGGTC+TGG | - | Chr5:91983974-91983993 | MsG0580029102.01.T01:intron | 50.0% | |
| GTTCGACTACAAAGTCACCC+TGG | - | Chr5:91985810-91985829 | MsG0580029102.01.T01:intron | 50.0% | |
| TCTTGAGTTCTCGCTGAGAC+TGG | + | Chr5:91985293-91985312 | None:intergenic | 50.0% | |
| TTCATTGAAGCAGCGCTTCC+CGG | - | Chr5:91985907-91985926 | MsG0580029102.01.T01:CDS | 50.0% | |
| ! | AAACCTCAACGTCGCGGTTT+TGG | - | Chr5:91986529-91986548 | MsG0580029102.01.T01:CDS | 50.0% |
| ! | AAGCTTATGCACGGGGTACT+GGG | + | Chr5:91986121-91986140 | None:intergenic | 50.0% |
| ! | AGGGTATCCAGATAGGACTC+TGG | + | Chr5:91985406-91985425 | None:intergenic | 50.0% |
| !! | CATCTGGTGCCACAATTCCT+TGG | + | Chr5:91985189-91985208 | None:intergenic | 50.0% |
| !! | CTTGGGAAGGGTATCCAGAT+AGG | + | Chr5:91985413-91985432 | None:intergenic | 50.0% |
| ACACCAAAACCGCGACGTTG+AGG | + | Chr5:91986535-91986554 | None:intergenic | 55.0% | |
| AGTTCTCGCTGAGACTGGCA+AGG | + | Chr5:91985288-91985307 | None:intergenic | 55.0% | |
| ATCAGCGGCAAGAGGAGAAG+TGG | - | Chr5:91985239-91985258 | MsG0580029102.01.T01:intron | 55.0% | |
| GAACGGCTAGGGTAAAGTGG+TGG | + | Chr5:91985794-91985813 | None:intergenic | 55.0% | |
| GAAGCTTATGCACGGGGTAC+TGG | + | Chr5:91986122-91986141 | None:intergenic | 55.0% | |
| GAGGCTGATCCATCTGCATC+TGG | + | Chr5:91985205-91985224 | None:intergenic | 55.0% | |
| GGTCAGGGCCGTCTTAACAA+TGG | - | Chr5:91984151-91984170 | MsG0580029102.01.T01:intron | 55.0% | |
| GTCACCCTGGGACATTGTGA+AGG | - | Chr5:91985823-91985842 | MsG0580029102.01.T01:CDS | 55.0% | |
| GTCGAACGGCTAGGGTAAAG+TGG | + | Chr5:91985797-91985816 | None:intergenic | 55.0% | |
| GTTCTCGCTGAGACTGGCAA+GGG | + | Chr5:91985287-91985306 | None:intergenic | 55.0% | |
| TCATTGAAGCAGCGCTTCCC+GGG | - | Chr5:91985908-91985927 | MsG0580029102.01.T01:CDS | 55.0% | |
| TGAGACTGGCAAGGGGAACA+CGG | + | Chr5:91985279-91985298 | None:intergenic | 55.0% | |
| TTCTCGCTGAGACTGGCAAG+GGG | + | Chr5:91985286-91985305 | None:intergenic | 55.0% | |
| AGACTGGCAAGGGGAACACG+GGG | + | Chr5:91985277-91985296 | None:intergenic | 60.0% | |
| AGCGGCAAGAGGAGAAGTGG+TGG | - | Chr5:91985242-91985261 | MsG0580029102.01.T01:intron | 60.0% | |
| GAGACTGGCAAGGGGAACAC+GGG | + | Chr5:91985278-91985297 | None:intergenic | 60.0% | |
| ! | CAAGGGGAACACGGGGTACT+GGG | + | Chr5:91985270-91985289 | None:intergenic | 60.0% |
| GCAAGGGGAACACGGGGTAC+TGG | + | Chr5:91985271-91985290 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 91983430 | 91986776 | 91983430 | ID=MsG0580029102.01;Name=MsG0580029102.01 |
| Chr5 | mRNA | 91983430 | 91986776 | 91983430 | ID=MsG0580029102.01.T01;Parent=MsG0580029102.01;Name=MsG0580029102.01.T01;_AED=0.26;_eAED=0.26;_QI=118|0.83|0.85|1|1|1|7|62|574 |
| Chr5 | exon | 91983430 | 91983983 | 91983430 | ID=MsG0580029102.01.T01:exon:26453;Parent=MsG0580029102.01.T01 |
| Chr5 | exon | 91984230 | 91984586 | 91984230 | ID=MsG0580029102.01.T01:exon:26452;Parent=MsG0580029102.01.T01 |
| Chr5 | exon | 91984774 | 91985064 | 91984774 | ID=MsG0580029102.01.T01:exon:26451;Parent=MsG0580029102.01.T01 |
| Chr5 | exon | 91985155 | 91985229 | 91985155 | ID=MsG0580029102.01.T01:exon:26450;Parent=MsG0580029102.01.T01 |
| Chr5 | exon | 91985814 | 91985968 | 91985814 | ID=MsG0580029102.01.T01:exon:26449;Parent=MsG0580029102.01.T01 |
| Chr5 | exon | 91986157 | 91986273 | 91986157 | ID=MsG0580029102.01.T01:exon:26448;Parent=MsG0580029102.01.T01 |
| Chr5 | exon | 91986421 | 91986776 | 91986421 | ID=MsG0580029102.01.T01:exon:26447;Parent=MsG0580029102.01.T01 |
| Chr5 | five_prime_UTR | 91986659 | 91986776 | 91986659 | ID=MsG0580029102.01.T01:five_prime_utr;Parent=MsG0580029102.01.T01 |
| Chr5 | CDS | 91986421 | 91986658 | 91986421 | ID=MsG0580029102.01.T01:cds;Parent=MsG0580029102.01.T01 |
| Chr5 | CDS | 91986157 | 91986273 | 91986157 | ID=MsG0580029102.01.T01:cds;Parent=MsG0580029102.01.T01 |
| Chr5 | CDS | 91985814 | 91985968 | 91985814 | ID=MsG0580029102.01.T01:cds;Parent=MsG0580029102.01.T01 |
| Chr5 | CDS | 91985155 | 91985229 | 91985155 | ID=MsG0580029102.01.T01:cds;Parent=MsG0580029102.01.T01 |
| Chr5 | CDS | 91984774 | 91985064 | 91984774 | ID=MsG0580029102.01.T01:cds;Parent=MsG0580029102.01.T01 |
| Chr5 | CDS | 91984230 | 91984586 | 91984230 | ID=MsG0580029102.01.T01:cds;Parent=MsG0580029102.01.T01 |
| Chr5 | CDS | 91983492 | 91983983 | 91983492 | ID=MsG0580029102.01.T01:cds;Parent=MsG0580029102.01.T01 |
| Chr5 | three_prime_UTR | 91983430 | 91983491 | 91983430 | ID=MsG0580029102.01.T01:three_prime_utr;Parent=MsG0580029102.01.T01 |
| Gene Sequence |
| Protein sequence |
